Gather latest CMake changes from develop (#2609)

Add HDF5_SRC_INCLUDE_DIRS variable cleanup cmake comments and documentation
author: Allen Byrne <50328838+byrnHDF@users.noreply.github.com> 2023-03-20 18:00:00 (GMT)
committer: GitHub <noreply@github.com> 2023-03-20 18:00:00 (GMT)
commit: 1ffaa38174b0f784b7ed6a471f40bf0e749ceac3 (patch)
tree: 7862edd79409afc7806996f166aa6bb7cd2088e9
parent: c01e27cd8ea443a6ddf68ca1052a491692e28ae9 (diff)
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74 files changed, 224 insertions, 223 deletions
diff --git a/CMakeLists.txt b/CMakeLists.txt
index a61532a..d116853 100644
--- a/CMakeLists.txt
+++ b/CMakeLists.txt
@@ -241,6 +241,8 @@ set (HDF5_JAVA_LOGGING_NOP_JAR     ${HDF5_SOURCE_DIR}/java/lib/ext/slf4j-nop-1.7
 set (HDF5_JAVA_LOGGING_SIMPLE_JAR  ${HDF5_SOURCE_DIR}/java/lib/ext/slf4j-simple-1.7.33.jar)
 set (HDF5_DOXYGEN_DIR              ${HDF5_SOURCE_DIR}/doxygen)
 
+set (HDF5_SRC_INCLUDE_DIRS ${HDF5_SRC_DIR})
+
 #-----------------------------------------------------------------------------
 # parse the full version number from H5public.h and include in H5_VERS_INFO
 #-----------------------------------------------------------------------------
@@ -1040,6 +1042,7 @@ if (EXISTS "${HDF5_SOURCE_DIR}/fortran" AND IS_DIRECTORY "${HDF5_SOURCE_DIR}/for
 
     # Parallel IO usage requires MPI to be Linked and Included
     if (H5_HAVE_PARALLEL)
+      find_package(MPI REQUIRED COMPONENTS Fortran)
       set (LINK_Fortran_LIBS ${LINK_Fortran_LIBS} ${MPI_Fortran_LIBRARIES})
       if (MPI_Fortran_LINK_FLAGS)
         set (CMAKE_Fortran_EXE_LINKER_FLAGS "${MPI_Fortran_LINK_FLAGS} ${CMAKE_EXE_LINKER_FLAGS}")
diff --git a/CTestConfig.cmake b/CTestConfig.cmake
index 8c934f0..da6b6c7 100644
--- a/CTestConfig.cmake
+++ b/CTestConfig.cmake
@@ -12,7 +12,7 @@
 ## This file should be placed in the root directory of your project.
 ## Then modify the CMakeLists.txt file in the root directory of your
 ## project to incorporate the testing dashboard.
-## # The following are required to uses Dart and the Cdash dashboard
+## # The following are required to use Dart and the CDash dashboard
 ##   ENABLE_TESTING()
 ##   INCLUDE(CTest)
 set (CTEST_PROJECT_NAME "HDF5")
diff --git a/c++/examples/CMakeLists.txt b/c++/examples/CMakeLists.txt
index c50315f..606c221 100644
--- a/c++/examples/CMakeLists.txt
+++ b/c++/examples/CMakeLists.txt
@@ -34,7 +34,7 @@ set (tutr_examples
 
 foreach (example ${examples})
   add_executable (cpp_ex_${example} ${HDF5_CPP_EXAMPLES_SOURCE_DIR}/${example}.cpp)
-  target_include_directories (cpp_ex_${example} PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (cpp_ex_${example} PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   if (NOT BUILD_SHARED_LIBS)
     TARGET_C_PROPERTIES (cpp_ex_${example} STATIC)
     target_link_libraries (cpp_ex_${example} PRIVATE ${HDF5_CPP_LIB_TARGET} ${HDF5_LIB_TARGET})
@@ -59,7 +59,7 @@ endforeach ()
 
 foreach (example ${tutr_examples})
   add_executable (cpp_ex_${example} ${HDF5_CPP_EXAMPLES_SOURCE_DIR}/${example}.cpp)
-  target_include_directories (cpp_ex_${example} PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (cpp_ex_${example} PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   if (NOT BUILD_SHARED_LIBS)
     TARGET_C_PROPERTIES (cpp_ex_${example} STATIC)
     target_link_libraries (cpp_ex_${example} PRIVATE ${HDF5_CPP_LIB_TARGET} ${HDF5_LIB_TARGET})
diff --git a/c++/src/CMakeLists.txt b/c++/src/CMakeLists.txt
index a47f8a6..b872eed 100644
--- a/c++/src/CMakeLists.txt
+++ b/c++/src/CMakeLists.txt
@@ -87,7 +87,7 @@ set (CPP_HDRS
 if (BUILD_STATIC_LIBS)
   add_library (${HDF5_CPP_LIB_TARGET} STATIC ${CPP_SOURCES} ${CPP_HDRS})
   target_include_directories (${HDF5_CPP_LIB_TARGET}
-      PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>"
+      PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>"
       INTERFACE "$<INSTALL_INTERFACE:$<INSTALL_PREFIX>/include>"
   )
   target_compile_options(${HDF5_CPP_LIB_TARGET} PRIVATE "${HDF5_CMAKE_CXX_FLAGS}")
@@ -105,7 +105,7 @@ endif ()
 if (BUILD_SHARED_LIBS)
   add_library (${HDF5_CPP_LIBSH_TARGET} SHARED ${CPP_SOURCES} ${CPP_HDRS})
   target_include_directories (${HDF5_CPP_LIBSH_TARGET}
-      PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>"
+      PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>"
       INTERFACE "$<INSTALL_INTERFACE:$<INSTALL_PREFIX>/include>"
   )
   target_compile_options(${HDF5_CPP_LIBSH_TARGET} PRIVATE "${HDF5_CMAKE_CXX_FLAGS}")
diff --git a/c++/test/CMakeLists.txt b/c++/test/CMakeLists.txt
index 1255e39..4ffac2f 100644
--- a/c++/test/CMakeLists.txt
+++ b/c++/test/CMakeLists.txt
@@ -38,7 +38,7 @@ set (srcdir ${CMAKE_CURRENT_SOURCE_DIR})
 configure_file (${HDF5_CPP_TEST_SOURCE_DIR}/H5srcdir_str.h.in H5srcdir_str.h  @ONLY)
 
 add_executable (cpp_testhdf5 ${CPP_TEST_SOURCES} ${HDF5_CPP_TEST_SOURCE_DIR}/h5cpputil.h)
-target_include_directories (cpp_testhdf5 PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};${HDF5_TEST_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+target_include_directories (cpp_testhdf5 PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};${HDF5_TEST_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
 target_compile_options(cpp_testhdf5 PRIVATE "${HDF5_CMAKE_CXX_FLAGS}")
 target_compile_definitions(cpp_testhdf5
     PRIVATE $<$<BOOL:${HDF5_ENABLE_PARALLEL}>:MPICH_SKIP_MPICXX;MPICH_IGNORE_CXX_SEEK># Parallel/MPI, prevent spurious cpp/cxx warnings
diff --git a/config/cmake/HDF5Macros.cmake b/config/cmake/HDF5Macros.cmake
index 8b8b334..710c28b 100644
--- a/config/cmake/HDF5Macros.cmake
+++ b/config/cmake/HDF5Macros.cmake
@@ -75,23 +75,23 @@ macro (H5_SET_VFD_LIST)
   )
 
   if (H5_HAVE_DIRECT)
-    set (VFD_LIST ${VFD_LIST} direct)
+    list (APPEND VFD_LIST direct)
   endif ()
   if (H5_HAVE_PARALLEL)
     # MPI I/O VFD is currently incompatible with too many tests in the VFD test set
-    # set (VFD_LIST ${VFD_LIST} mpio)
+    # list (APPEND VFD_LIST mpio)
   endif ()
   if (H5_HAVE_MIRROR_VFD)
-    set (VFD_LIST ${VFD_LIST} mirror)
+    list (APPEND VFD_LIST mirror)
   endif ()
   if (H5_HAVE_ROS3_VFD)
-    set (VFD_LIST ${VFD_LIST} ros3)
+    list (APPEND VFD_LIST ros3)
   endif ()
   if (H5_HAVE_LIBHDFS)
-    set (VFD_LIST ${VFD_LIST} hdfs)
+    list (APPEND VFD_LIST hdfs)
   endif ()
   if (H5_HAVE_WINDOWS)
-    set (VFD_LIST ${VFD_LIST} windows)
+    list (APPEND VFD_LIST windows)
   endif ()
 endmacro ()
 
diff --git a/config/cmake/HDF5PluginCache.cmake b/config/cmake/HDF5PluginCache.cmake
index f5334bb..e676919 100644
--- a/config/cmake/HDF5PluginCache.cmake
+++ b/config/cmake/HDF5PluginCache.cmake
@@ -11,8 +11,8 @@ set (BUILD_EXAMPLES ON CACHE BOOL "Build H5PL Examples" FORCE)
 set (HDF5_HDF5_HEADER "H5pubconf.h" CACHE STRING "Name of HDF5 header" FORCE)
 set (HDF5_LINK_LIBS ${HDF5_LIBSH_TARGET} CACHE STRING "HDF5 target" FORCE)
 #set (HDF5_INCLUDE_DIR $<TARGET_PROPERTY:${HDF5_LIBSH_TARGET},INCLUDE_DIRECTORIES> CACHE PATH "HDF5 include dirs" FORCE)
-set (HDF5_INCLUDE_DIR "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR}" CACHE PATH "HDF5 include dirs" FORCE)
-set (HDF5_INCLUDE_DIRS "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR}" CACHE PATH "HDF5 include dirs" FORCE)
+set (HDF5_INCLUDE_DIR "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR}" CACHE PATH "HDF5 include dirs" FORCE)
+set (HDF5_INCLUDE_DIRS "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR}" CACHE PATH "HDF5 include dirs" FORCE)
 set (HDF5_DIR ${CMAKE_CURRENT_BINARY_DIR} CACHE STRING "HDF5 build folder" FORCE)
 
 set (HDF5_DUMP_EXECUTABLE $<TARGET_FILE:h5dump-shared> CACHE STRING "HDF5 h5dump target" FORCE)
diff --git a/config/cmake/HDF5PluginMacros.cmake b/config/cmake/HDF5PluginMacros.cmake
index 5cb5f99..d4270ed 100644
--- a/config/cmake/HDF5PluginMacros.cmake
+++ b/config/cmake/HDF5PluginMacros.cmake
@@ -25,47 +25,47 @@ macro (EXTERNAL_PLUGIN_LIBRARY compress_type)
     if (ENABLE_BLOSC)
       add_dependencies (h5blosc ${HDF5_LIBSH_TARGET})
       add_dependencies (h5ex_d_blosc ${HDF5_LIBSH_TARGET})
-      target_include_directories (h5ex_d_blosc PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR}")
+      target_include_directories (h5ex_d_blosc PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR}")
     endif ()
     if (ENABLE_BSHUF)
       add_dependencies (h5bshuf ${HDF5_LIBSH_TARGET})
       add_dependencies (h5ex_d_bshuf ${HDF5_LIBSH_TARGET})
-      target_include_directories (h5ex_d_bshuf PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR}")
+      target_include_directories (h5ex_d_bshuf PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR}")
     endif ()
     if (ENABLE_BZIP2)
       add_dependencies (h5bz2 ${HDF5_LIBSH_TARGET})
       add_dependencies (h5ex_d_bzip2 ${HDF5_LIBSH_TARGET})
-      target_include_directories (h5ex_d_bzip2 PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR}")
+      target_include_directories (h5ex_d_bzip2 PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR}")
     endif ()
     if (ENABLE_JPEG)
       add_dependencies (h5jpeg ${HDF5_LIBSH_TARGET})
       add_dependencies (h5ex_d_jpeg ${HDF5_LIBSH_TARGET})
-      target_include_directories (h5ex_d_jpeg PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR}")
+      target_include_directories (h5ex_d_jpeg PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR}")
     endif ()
     if (ENABLE_LZ4)
       add_dependencies (h5lz4 ${HDF5_LIBSH_TARGET})
       add_dependencies (h5ex_d_lz4 ${HDF5_LIBSH_TARGET})
-      target_include_directories (h5ex_d_lz4 PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR}")
+      target_include_directories (h5ex_d_lz4 PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR}")
     endif ()
     if (ENABLE_LZF)
       add_dependencies (h5lzf ${HDF5_LIBSH_TARGET})
       add_dependencies (h5ex_d_lzf ${HDF5_LIBSH_TARGET})
-      target_include_directories (h5ex_d_lzf PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR}")
+      target_include_directories (h5ex_d_lzf PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR}")
     endif ()
     if (ENABLE_MAFISC)
       add_dependencies (h5mafisc ${HDF5_LIBSH_TARGET})
       add_dependencies (h5ex_d_mafisc ${HDF5_LIBSH_TARGET})
-      target_include_directories (h5ex_d_mafisc PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR}")
+      target_include_directories (h5ex_d_mafisc PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR}")
     endif ()
     if (ENABLE_SZ)
       add_dependencies (h5sz ${HDF5_LIBSH_TARGET})
       add_dependencies (h5ex_d_sz ${HDF5_LIBSH_TARGET})
-      target_include_directories (h5ex_d_sz PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR}")
+      target_include_directories (h5ex_d_sz PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR}")
     endif ()
     if (ENABLE_ZFP)
       add_dependencies (h5zfp ${HDF5_LIBSH_TARGET})
       add_dependencies (h5ex_d_zfp ${HDF5_LIBSH_TARGET})
-      target_include_directories (h5ex_d_zfp PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR}")
+      target_include_directories (h5ex_d_zfp PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR}")
     endif ()
     if (ENABLE_ZSTD)
       add_dependencies (h5zstd ${HDF5_LIBSH_TARGET})
diff --git a/config/cmake/UseJavaSymlinks.cmake b/config/cmake/UseJavaSymlinks.cmake
index cb2e282..183a744 100644
--- a/config/cmake/UseJavaSymlinks.cmake
+++ b/config/cmake/UseJavaSymlinks.cmake
@@ -4,10 +4,7 @@
 
 if (UNIX AND _JAVA_TARGET_OUTPUT_LINK)
     if (_JAVA_TARGET_OUTPUT_NAME)
-        find_program(LN_EXECUTABLE
-            NAMES
-                ln
-        )
+        find_program(LN_EXECUTABLE NAMES ln)
 
         execute_process(
             COMMAND ${LN_EXECUTABLE} -sf "${_JAVA_TARGET_OUTPUT_NAME}" "${_JAVA_TARGET_OUTPUT_LINK}"
diff --git a/config/cmake/libhdf5.settings.cmake.in b/config/cmake/libhdf5.settings.cmake.in
index 20a750e..56714ef 100644
--- a/config/cmake/libhdf5.settings.cmake.in
+++ b/config/cmake/libhdf5.settings.cmake.in
@@ -50,6 +50,7 @@ Languages:
 @BUILD_FORTRAN_CONDITIONAL_TRUE@               AM Fortran Flags: @AM_FCFLAGS@
 @BUILD_FORTRAN_CONDITIONAL_TRUE@         Shared Fortran Library: @H5_ENABLE_SHARED_LIB@
 @BUILD_FORTRAN_CONDITIONAL_TRUE@         Static Fortran Library: @H5_ENABLE_STATIC_LIB@
+@BUILD_FORTRAN_CONDITIONAL_TRUE@               Module Directory: @CMAKE_Fortran_MODULE_DIRECTORY@
 
                             C++: @HDF5_BUILD_CPP_LIB@
 @BUILD_CXX_CONDITIONAL_TRUE@                   C++ Compiler: @CMAKE_CXX_COMPILER@ @CMAKE_CXX_COMPILER_VERSION@
diff --git a/config/cmake/mccacheinit.cmake b/config/cmake/mccacheinit.cmake
index dd0c9ec..dcd7ca6 100644
--- a/config/cmake/mccacheinit.cmake
+++ b/config/cmake/mccacheinit.cmake
@@ -11,9 +11,9 @@
 #
 # This is the CMakeCache file.
 
-########################
+#########################
 # EXTERNAL cache entries
-########################
+#########################
 
 set (CMAKE_INSTALL_FRAMEWORK_PREFIX "Library/Frameworks" CACHE STRING "Frameworks installation directory" FORCE)
 
diff --git a/doxygen/examples/H5Pget_metadata_read_attempts.2.c b/doxygen/examples/H5Pget_metadata_read_attempts.2.c
index 2cd12db..44b26e9 100644
--- a/doxygen/examples/H5Pget_metadata_read_attempts.2.c
+++ b/doxygen/examples/H5Pget_metadata_read_attempts.2.c
@@ -1,7 +1,7 @@
 /* Open the file with SWMR access and default file access property list */
 fid = H5Fopen(FILE, (H5F_ACC_RDONLY | H5F_ACC_SWMR_READ), H5P_DEFAULT);
 
-/* Get the file's file access roperty list */
+/* Get the file's file access property list */
 file_fapl = H5Fget_access_plist(fid);
 
 /* Retrieve the # of read attempts from the file's file access property list */
@@ -26,7 +26,7 @@ H5Pset_metadata_read_attempts(fapl, 20);
 /* Open the file with SWMR access and the non-default file access property list */
 fid = H5Fopen(FILE, (H5F_ACC_RDONLY | H5F_ACC_SWMR_READ), fapl);
 
-/* Get the file's file access roperty list */
+/* Get the file's file access property list */
 file_fapl = H5Fget_access_plist(fid);
 
 /* Retrieve the # of read attempts from the file's file access property list */
diff --git a/doxygen/examples/H5Pget_metadata_read_attempts.3.c b/doxygen/examples/H5Pget_metadata_read_attempts.3.c
index 4b5ea3a..8edda9f 100644
--- a/doxygen/examples/H5Pget_metadata_read_attempts.3.c
+++ b/doxygen/examples/H5Pget_metadata_read_attempts.3.c
@@ -1,7 +1,7 @@
 /* Open the file with non-SWMR access and default file access property list */
 fid = H5Fopen(FILE, H5F_ACC_RDONLY, H5P_DEFAULT);
 
-/* Get the file's file access roperty list */
+/* Get the file's file access property list */
 file_fapl = H5Fget_access_plist(fid);
 
 /* Retrieve the # of read attempts from the file's file access property list */
@@ -26,7 +26,7 @@ H5Pset_metadata_read_attempts(fapl, 20);
 /* Open the file with non-SWMR access and the non-default file access property list */
 fid = H5Fopen(FILE, H5F_ACC_RDONLY, fapl);
 
-/* Get the file's file access roperty list */
+/* Get the file's file access property list */
 file_fapl = H5Fget_access_plist(fid);
 
 /* Retrieve the # of read attempts from the file's file access property list */
diff --git a/doxygen/examples/H5Pset_metadata_read_attempts.c b/doxygen/examples/H5Pset_metadata_read_attempts.c
index 7c2f65d..db3573b 100644
--- a/doxygen/examples/H5Pset_metadata_read_attempts.c
+++ b/doxygen/examples/H5Pset_metadata_read_attempts.c
@@ -8,7 +8,7 @@ H5Pset_metadata_read_attempts(fapl, 20);
 /* Open the file with SWMR access and the non-default file access property list */
 fid = H5Fopen(FILE, (H5F_ACC_RDONLY | H5F_ACC_SWMR_READ), fapl);
 
-/* Get the file's file access roperty list */
+/* Get the file's file access property list */
 file_fapl = H5Fget_access_plist(fid);
 
 /* Retrieve the # of read attempts from the file's file access property list */
@@ -38,7 +38,7 @@ H5Pset_metadata_read_attempts(fapl, 20);
 /* Open the file with SWMR access and the non-default file access property list */
 fid = H5Fopen(FILE, H5F_ACC_RDONLY, fapl);
 
-/* Get the file's file access roperty list */
+/* Get the file's file access property list */
 file_fapl = H5Fget_access_plist(fid);
 
 /* Retrieve the # of read attempts from the file's file access property list */
diff --git a/examples/CMakeLists.txt b/examples/CMakeLists.txt
index 83edbc4..1e05572 100644
--- a/examples/CMakeLists.txt
+++ b/examples/CMakeLists.txt
@@ -50,7 +50,7 @@ endif ()
 
 foreach (example ${examples})
   add_executable (${example} ${HDF5_EXAMPLES_SOURCE_DIR}/${example}.c)
-  target_include_directories (${example} PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (${example} PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   if (NOT BUILD_SHARED_LIBS)
     TARGET_C_PROPERTIES (${example} STATIC)
     target_link_libraries (${example} PRIVATE ${HDF5_LIB_TARGET})
@@ -71,7 +71,7 @@ endforeach ()
 if (H5_HAVE_PARALLEL)
   foreach (parallel_example ${parallel_examples})
     add_executable (${parallel_example} ${HDF5_EXAMPLES_SOURCE_DIR}/${parallel_example}.c)
-    target_include_directories (${parallel_example} PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+    target_include_directories (${parallel_example} PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
     if (NOT BUILD_SHARED_LIBS)
       TARGET_C_PROPERTIES (${parallel_example} STATIC)
       target_link_libraries (${parallel_example} PRIVATE ${HDF5_LIB_TARGET} MPI::MPI_C)
diff --git a/examples/CMakeTests.cmake b/examples/CMakeTests.cmake
index 6c84d1d..a3bcd47 100644
--- a/examples/CMakeTests.cmake
+++ b/examples/CMakeTests.cmake
@@ -83,7 +83,6 @@ if (HDF5_TEST_SERIAL)
           -D "TEST_EXPECT=0"
           -D "TEST_SKIP_COMPARE=TRUE"
           -D "TEST_OUTPUT=${example}.txt"
-          #-D "TEST_REFERENCE=${example}.out"
           -D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
           -P "${HDF_RESOURCES_DIR}/runTest.cmake"
       )
@@ -113,7 +112,6 @@ if (H5_HAVE_PARALLEL AND HDF5_TEST_PARALLEL AND NOT WIN32)
           -D "TEST_SKIP_COMPARE=TRUE"
           -D "TEST_OUTPUT=${parallel_example}.out"
           -D "TEST_REFERENCE:STRING=PHDF5 example finished with no errors"
-          #-D "TEST_FILTER:STRING=PHDF5 tests finished with no errors"
           -D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
           -P "${HDF_RESOURCES_DIR}/grepTest.cmake"
       )
diff --git a/fortran/examples/CMakeLists.txt b/fortran/examples/CMakeLists.txt
index 14ed5fb..f5714d7 100644
--- a/fortran/examples/CMakeLists.txt
+++ b/fortran/examples/CMakeLists.txt
@@ -45,7 +45,7 @@ foreach (example ${examples})
     target_include_directories (f90_ex_${example}
         PRIVATE
             "${CMAKE_Fortran_MODULE_DIRECTORY}/static"
-            "${HDF5_SRC_DIR}"
+            "${HDF5_SRC_INCLUDE_DIRS}"
             "${HDF5_SRC_BINARY_DIR}"
             "${HDF5_F90_BINARY_DIR}"
             "${HDF5_F90_BINARY_DIR}/static"
@@ -60,7 +60,7 @@ foreach (example ${examples})
     target_include_directories (f90_ex_${example}
         PRIVATE
             "${CMAKE_Fortran_MODULE_DIRECTORY}/shared"
-            "${HDF5_SRC_DIR}"
+            "${HDF5_SRC_INCLUDE_DIRS}"
             "${HDF5_SRC_BINARY_DIR}"
             "${HDF5_F90_BINARY_DIR}"
             "${HDF5_F90_BINARY_DIR}/shared"
@@ -86,7 +86,7 @@ foreach (example ${F2003_examples})
     target_include_directories (f03_ex_${example}
         PRIVATE
             "${CMAKE_Fortran_MODULE_DIRECTORY}/static"
-            "${HDF5_SRC_DIR}"
+            "${HDF5_SRC_INCLUDE_DIRS}"
             "${HDF5_SRC_BINARY_DIR}"
             "${HDF5_F90_BINARY_DIR}"
             "${HDF5_F90_BINARY_DIR}/static"
@@ -101,7 +101,7 @@ foreach (example ${F2003_examples})
     target_include_directories (f03_ex_${example}
         PRIVATE
             "${CMAKE_Fortran_MODULE_DIRECTORY}/shared"
-            "${HDF5_SRC_DIR}"
+            "${HDF5_SRC_INCLUDE_DIRS}"
             "${HDF5_SRC_BINARY_DIR}"
             "${HDF5_F90_BINARY_DIR}"
             "${HDF5_F90_BINARY_DIR}/shared"
@@ -127,7 +127,7 @@ if (H5_HAVE_PARALLEL AND MPI_Fortran_FOUND)
     target_include_directories (f90_ex_ph5example
         PRIVATE
             "${CMAKE_Fortran_MODULE_DIRECTORY}/static"
-            "${HDF5_SRC_DIR}"
+            "${HDF5_SRC_INCLUDE_DIRS}"
             "${HDF5_SRC_BINARY_DIR}"
             "${HDF5_F90_BINARY_DIR}"
             "${HDF5_F90_BINARY_DIR}/static"
@@ -148,7 +148,7 @@ if (H5_HAVE_PARALLEL AND MPI_Fortran_FOUND)
     target_include_directories (f90_ex_ph5example
         PRIVATE
             "${CMAKE_Fortran_MODULE_DIRECTORY}/shared"
-            "${HDF5_SRC_DIR}"
+            "${HDF5_SRC_INCLUDE_DIRS}"
             "${HDF5_SRC_BINARY_DIR}"
             "${HDF5_F90_BINARY_DIR}"
             "${HDF5_F90_BINARY_DIR}/shared"
diff --git a/fortran/src/CMakeLists.txt b/fortran/src/CMakeLists.txt
index f204d3e..095daaa 100644
--- a/fortran/src/CMakeLists.txt
+++ b/fortran/src/CMakeLists.txt
@@ -71,7 +71,7 @@ add_executable (H5match_types
     ${HDF5_F90_BINARY_DIR}/H5fort_type_defines.h
     ${HDF5_F90_SRC_SOURCE_DIR}/H5match_types.c
 )
-target_include_directories (H5match_types PRIVATE "${HDF5_SRC_BINARY_DIR};${HDF5_SRC_DIR};${HDF5_F90_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+target_include_directories (H5match_types PRIVATE "${HDF5_SRC_BINARY_DIR};${HDF5_SRC_INCLUDE_DIRS};${HDF5_F90_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
 
 add_custom_command (TARGET H5match_types POST_BUILD
     BYPRODUCTS ${HDF5_F90_BINARY_DIR}/H5f90i_gen.h ${HDF5_F90_BINARY_DIR}/H5fortran_types.F90
@@ -159,7 +159,7 @@ endif ()
 if (BUILD_STATIC_LIBS)
   add_library (${HDF5_F90_C_LIB_TARGET} STATIC ${f90CStub_C_SOURCES} ${f90CStub_C_HDRS} ${f90CStub_CGEN_HDRS})
   target_include_directories (${HDF5_F90_C_LIB_TARGET}
-      PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};${HDF5_F90_BINARY_DIR};${HDF5_F90_BINARY_DIR}/static;$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>"
+      PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};${HDF5_F90_BINARY_DIR};${HDF5_F90_BINARY_DIR}/static;$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>"
       INTERFACE "$<INSTALL_INTERFACE:$<INSTALL_PREFIX>/include>"
   )
   target_compile_options(${HDF5_F90_C_LIB_TARGET} PRIVATE "${HDF5_CMAKE_C_FLAGS}")
@@ -178,7 +178,7 @@ endif ()
 if (BUILD_SHARED_LIBS)
   add_library (${HDF5_F90_C_LIBSH_TARGET} SHARED ${f90CStub_C_SOURCES} ${f90CStub_C_HDRS} ${f90CStub_CGEN_SHHDRS})
   target_include_directories (${HDF5_F90_C_LIBSH_TARGET}
-      PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};${HDF5_F90_BINARY_DIR};${HDF5_F90_BINARY_DIR}/shared;$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>"
+      PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};${HDF5_F90_BINARY_DIR};${HDF5_F90_BINARY_DIR}/shared;$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>"
       INTERFACE "$<INSTALL_INTERFACE:$<INSTALL_PREFIX>/include>"
   )
   target_compile_options(${HDF5_F90_C_LIBSH_TARGET} PRIVATE "${HDF5_CMAKE_C_FLAGS}")
diff --git a/fortran/src/H5config_f.inc.cmake b/fortran/src/H5config_f.inc.cmake
index 565d6eb..9def051 100644
--- a/fortran/src/H5config_f.inc.cmake
+++ b/fortran/src/H5config_f.inc.cmake
@@ -11,7 +11,7 @@
 ! * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
 ! fortran/src/H5config_f.inc. Generated from fortran/src/H5config_f.inc.in by configure
 
-! Define if we have parallel support
+! Define if there is parallel support
 #cmakedefine01 H5_HAVE_PARALLEL
 #if H5_HAVE_PARALLEL == 0
 #undef H5_HAVE_PARALLEL
diff --git a/fortran/test/CMakeLists.txt b/fortran/test/CMakeLists.txt
index 1df9edc..cdcfc65 100644
--- a/fortran/test/CMakeLists.txt
+++ b/fortran/test/CMakeLists.txt
@@ -45,7 +45,7 @@ if (NOT BUILD_SHARED_LIBS)
   add_library (${HDF5_F90_C_TEST_LIB_TARGET} STATIC t.c t.h)
   set_source_files_properties (t.c PROPERTIES LANGUAGE C)
   target_include_directories (${HDF5_F90_C_TEST_LIB_TARGET}
-      PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};${HDF5_F90_BINARY_DIR};${HDF5_F90_BINARY_DIR}/static;$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>"
+      PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};${HDF5_F90_BINARY_DIR};${HDF5_F90_BINARY_DIR}/static;$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>"
       INTERFACE "$<INSTALL_INTERFACE:$<INSTALL_PREFIX>/include>"
   )
   target_compile_options(${HDF5_F90_C_TEST_LIB_TARGET} PRIVATE "${HDF5_CMAKE_C_FLAGS}")
@@ -62,7 +62,7 @@ if (NOT BUILD_SHARED_LIBS)
 else ()
   add_library (${HDF5_F90_C_TEST_LIBSH_TARGET} SHARED t.c t.h)
   target_include_directories (${HDF5_F90_C_TEST_LIBSH_TARGET}
-      PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};${HDF5_F90_BINARY_DIR};${HDF5_F90_BINARY_DIR}/shared;$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>"
+      PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};${HDF5_F90_BINARY_DIR};${HDF5_F90_BINARY_DIR}/shared;$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>"
       INTERFACE "$<INSTALL_INTERFACE:$<INSTALL_PREFIX>/include>"
   )
   target_compile_options(${HDF5_F90_C_TEST_LIBSH_TARGET} PRIVATE "${HDF5_CMAKE_C_FLAGS}")
diff --git a/fortran/test/CMakeTests.cmake b/fortran/test/CMakeTests.cmake
index b27e550..18e9eda 100644
--- a/fortran/test/CMakeTests.cmake
+++ b/fortran/test/CMakeTests.cmake
@@ -150,3 +150,10 @@ add_test (
 set_tests_properties (FORTRAN_fflush2 PROPERTIES
     DEPENDS FORTRAN_fflush1
 )
+add_test (
+    NAME FORTRAN_flush1-clean-objects
+    COMMAND ${CMAKE_COMMAND} -E remove flush.h5
+)
+set_tests_properties (FORTRAN_flush1-clean-objects PROPERTIES
+    DEPENDS FORTRAN_fflush2
+)
diff --git a/fortran/testpar/CMakeLists.txt b/fortran/testpar/CMakeLists.txt
index 12489528..f2e9201 100644
--- a/fortran/testpar/CMakeLists.txt
+++ b/fortran/testpar/CMakeLists.txt
@@ -4,7 +4,7 @@ project (HDF5_FORTRAN_TESTPAR C Fortran)
 #-----------------------------------------------------------------------------
 # Setup include Directories
 #-----------------------------------------------------------------------------
-set (TESTPAR_INCLUDES ${MPI_Fortran_INCLUDE_DIRS} ${HDF5_F90_BINARY_DIR} ${HDF5_F90_SRC_DIR}/src))
+set (TESTPAR_INCLUDES ${MPI_Fortran_INCLUDE_DIRS} ${HDF5_F90_BINARY_DIR} ${HDF5_F90_SRC_DIR}/src)
 if (NOT BUILD_SHARED_LIBS)
   set (TESTPAR_INCLUDES ${TESTPAR_INCLUDES} ${CMAKE_Fortran_MODULE_DIRECTORY}/static)
 else ()
@@ -53,8 +53,6 @@ else ()
   )
 endif ()
 
-#set_property(TARGET parallel_test APPEND PROPERTY LINK_FLAGS $<$<STREQUAL:"x${CMAKE_Fortran_SIMULATE_ID}","xMSVC">:"-SUBSYSTEM:CONSOLE">)
-#set_property(TARGET parallel_test APPEND PROPERTY LINK_FLAGS $<$<STREQUAL:"x${CMAKE_Fortran_SIMULATE_ID}","xMSVC">:${WIN_LINK_FLAGS}>)
 if(MSVC)
   set_property(TARGET parallel_test PROPERTY LINK_FLAGS "/SUBSYSTEM:CONSOLE ${WIN_LINK_FLAGS}")
 endif()
diff --git a/hl/c++/examples/CMakeLists.txt b/hl/c++/examples/CMakeLists.txt
index bfad538..548dd00 100644
--- a/hl/c++/examples/CMakeLists.txt
+++ b/hl/c++/examples/CMakeLists.txt
@@ -5,7 +5,7 @@ project (HDF5_HL_CPP_EXAMPLES CXX)
 #  Add in the examples for the Packet Table codes
 # --------------------------------------------------------------------
 add_executable (ptExampleFL ${HDF5_HL_CPP_EXAMPLES_SOURCE_DIR}/ptExampleFL.cpp)
-target_include_directories (ptExampleFL PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+target_include_directories (ptExampleFL PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
 if (NOT BUILD_SHARED_LIBS)
   TARGET_C_PROPERTIES (ptExampleFL STATIC)
   target_link_libraries (ptExampleFL PRIVATE
diff --git a/hl/c++/src/CMakeLists.txt b/hl/c++/src/CMakeLists.txt
index b8e1178..71a4c9b 100644
--- a/hl/c++/src/CMakeLists.txt
+++ b/hl/c++/src/CMakeLists.txt
@@ -11,7 +11,7 @@ set (HDF5_HL_CPP_HDRS ${HDF5_HL_CPP_SRC_SOURCE_DIR}/H5PacketTable.h)
 if (BUILD_STATIC_LIBS)
   add_library (${HDF5_HL_CPP_LIB_TARGET} STATIC ${HDF5_HL_CPP_SOURCES} ${HDF5_HL_CPP_HDRS})
   target_include_directories (${HDF5_HL_CPP_LIB_TARGET}
-      PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>"
+      PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>"
       INTERFACE "$<INSTALL_INTERFACE:$<INSTALL_PREFIX>/include>"
   )
   target_compile_options(${HDF5_HL_CPP_LIB_TARGET} PRIVATE "${HDF5_CMAKE_CXX_FLAGS}")
@@ -26,7 +26,7 @@ endif ()
 if (BUILD_SHARED_LIBS)
   add_library (${HDF5_HL_CPP_LIBSH_TARGET} SHARED ${HDF5_HL_CPP_SOURCES})
   target_include_directories (${HDF5_HL_CPP_LIBSH_TARGET}
-      PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>"
+      PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>"
       INTERFACE "$<INSTALL_INTERFACE:$<INSTALL_PREFIX>/include>"
   )
   target_compile_options(${HDF5_HL_CPP_LIBSH_TARGET} PRIVATE "${HDF5_CMAKE_CXX_FLAGS}")
diff --git a/hl/c++/test/CMakeLists.txt b/hl/c++/test/CMakeLists.txt
index 9a1d6fd..fb750dd 100644
--- a/hl/c++/test/CMakeLists.txt
+++ b/hl/c++/test/CMakeLists.txt
@@ -3,7 +3,7 @@ project (HDF5_HL_CPP_TEST CXX)
 
 add_executable (hl_ptableTest ${HDF5_HL_CPP_TEST_SOURCE_DIR}/ptableTest.cpp)
 target_compile_options(hl_ptableTest PRIVATE "${HDF5_CMAKE_CXX_FLAGS}")
-target_include_directories (hl_ptableTest PRIVATE "${HDF5_HL_SRC_DIR}/test;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+target_include_directories (hl_ptableTest PRIVATE "${HDF5_HL_SRC_DIR}/test;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
 if (NOT BUILD_SHARED_LIBS)
   TARGET_C_PROPERTIES (hl_ptableTest STATIC)
   target_link_libraries (hl_ptableTest PRIVATE
diff --git a/hl/c++/test/CMakeTests.cmake b/hl/c++/test/CMakeTests.cmake
index 5abbd47..8b5dde3 100644
--- a/hl/c++/test/CMakeTests.cmake
+++ b/hl/c++/test/CMakeTests.cmake
@@ -21,6 +21,7 @@ add_test (
     COMMAND    ${CMAKE_COMMAND}
         -E remove ${example}.txt
 )
+
 if (HDF5_ENABLE_USING_MEMCHECKER)
   add_test (NAME HL_CPP_ptableTest COMMAND ${CMAKE_CROSSCOMPILING_EMULATOR} $<TARGET_FILE:hl_ptableTest>)
 else ()
diff --git a/hl/examples/CMakeLists.txt b/hl/examples/CMakeLists.txt
index 93ae9e8..f14d030 100644
--- a/hl/examples/CMakeLists.txt
+++ b/hl/examples/CMakeLists.txt
@@ -28,7 +28,7 @@ set (examples
 
 foreach (example ${examples})
   add_executable (hl_ex_${example} ${HDF5_HL_EXAMPLES_SOURCE_DIR}/${example}.c)
-  target_include_directories (hl_ex_${example} PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (hl_ex_${example} PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   if (NOT BUILD_SHARED_LIBS)
     TARGET_C_PROPERTIES (hl_ex_${example} STATIC)
     target_link_libraries (hl_ex_${example} PRIVATE ${HDF5_HL_LIB_TARGET} ${HDF5_LIB_TARGET})
diff --git a/hl/fortran/examples/CMakeTests.cmake b/hl/fortran/examples/CMakeTests.cmake
index 6389fbe..23f77da 100644
--- a/hl/fortran/examples/CMakeTests.cmake
+++ b/hl/fortran/examples/CMakeTests.cmake
@@ -44,5 +44,6 @@ foreach (example ${examples})
   endif ()
   set_tests_properties (HL_FORTRAN_f90_ex_${example} PROPERTIES
       FIXTURES_REQUIRED clear_HL_FORTRAN_f90_ex
+      WORKING_DIRECTORY ${PROJECT_BINARY_DIR}
   )
 endforeach ()
diff --git a/hl/fortran/src/CMakeLists.txt b/hl/fortran/src/CMakeLists.txt
index 538b689..661f4ad 100644
--- a/hl/fortran/src/CMakeLists.txt
+++ b/hl/fortran/src/CMakeLists.txt
@@ -59,7 +59,7 @@ set (HDF5_HL_F90_HEADERS ${HDF5_HL_F90_SRC_SOURCE_DIR}/H5LTf90proto.h ${HDF5_HL_
 if (BUILD_STATIC_LIBS)
   add_library (${HDF5_HL_F90_C_LIB_TARGET} STATIC ${HDF5_HL_F90_C_SOURCES} ${HDF5_HL_F90_HEADERS})
   target_include_directories (${HDF5_HL_F90_C_LIB_TARGET}
-      PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};${HDF5_F90_BINARY_DIR}/static;$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>"
+      PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};${HDF5_F90_BINARY_DIR}/static;$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>"
       INTERFACE "$<INSTALL_INTERFACE:$<INSTALL_PREFIX>/include>"
   )
   target_compile_options(${HDF5_HL_F90_C_LIB_TARGET} PRIVATE "${HDF5_CMAKE_C_FLAGS}")
@@ -76,7 +76,7 @@ endif ()
 if (BUILD_SHARED_LIBS)
   add_library (${HDF5_HL_F90_C_LIBSH_TARGET} SHARED ${HDF5_HL_F90_C_SOURCES} ${HDF5_HL_F90_HEADERS})
   target_include_directories (${HDF5_HL_F90_C_LIBSH_TARGET}
-      PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};${HDF5_F90_BINARY_DIR}/shared;$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>"
+      PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};${HDF5_F90_BINARY_DIR}/shared;$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>"
       INTERFACE "$<INSTALL_INTERFACE:$<INSTALL_PREFIX>/include>"
   )
   target_compile_options(${HDF5_HL_F90_C_LIBSH_TARGET} PRIVATE "${HDF5_CMAKE_C_FLAGS}")
diff --git a/hl/fortran/test/CMakeTests.cmake b/hl/fortran/test/CMakeTests.cmake
index 463ac07..8a97fac 100644
--- a/hl/fortran/test/CMakeTests.cmake
+++ b/hl/fortran/test/CMakeTests.cmake
@@ -21,11 +21,11 @@ set (test_hl_fortran_CLEANFILES
     dsetf2.h5
     dsetf3.h5
     dsetf4.h5
-          dsetf5.h5
-          f1img.h5
-          f1tab.h5
-          f2tab.h5
-          tstds.h5
+    dsetf5.h5
+    f1img.h5
+    f1tab.h5
+    f2tab.h5
+    tstds.h5
 )
 
 # Remove any output file left over from previous test run
@@ -54,6 +54,7 @@ macro (ADD_H5_FORTRAN_TEST file)
   endif ()
   set_tests_properties (HL_FORTRAN_f90_${file} PROPERTIES
       FIXTURES_REQUIRED clear_HL_FORTRAN_test
+      WORKING_DIRECTORY ${PROJECT_BINARY_DIR}
   )
 endmacro ()
 
diff --git a/hl/src/CMakeLists.txt b/hl/src/CMakeLists.txt
index 2700188..fafa0ef 100644
--- a/hl/src/CMakeLists.txt
+++ b/hl/src/CMakeLists.txt
@@ -43,7 +43,7 @@ set (HL_PRIVATE_HEADERS
 if (BUILD_STATIC_LIBS)
   add_library (${HDF5_HL_LIB_TARGET} STATIC ${HL_SOURCES} ${HL_HEADERS} ${HL_PRIVATE_HEADERS})
   target_include_directories (${HDF5_HL_LIB_TARGET}
-      PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>"
+      PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>"
       INTERFACE "$<INSTALL_INTERFACE:$<INSTALL_PREFIX>/include>"
   )
   target_compile_options(${HDF5_HL_LIB_TARGET} PRIVATE "${HDF5_CMAKE_C_FLAGS}")
@@ -58,7 +58,7 @@ endif ()
 if (BUILD_SHARED_LIBS)
   add_library (${HDF5_HL_LIBSH_TARGET} SHARED ${HL_SOURCES} ${HL_HEADERS} ${HL_PRIVATE_HEADERS})
   target_include_directories (${HDF5_HL_LIBSH_TARGET}
-      PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>"
+      PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>"
       INTERFACE "$<INSTALL_INTERFACE:$<INSTALL_PREFIX>/include>"
   )
   target_compile_options(${HDF5_HL_LIBSH_TARGET} PRIVATE "${HDF5_CMAKE_C_FLAGS}")
diff --git a/hl/test/CMakeLists.txt b/hl/test/CMakeLists.txt
index c619fc6..cec2458 100644
--- a/hl/test/CMakeLists.txt
+++ b/hl/test/CMakeLists.txt
@@ -20,7 +20,7 @@ configure_file (${HDF5_HL_TEST_SOURCE_DIR}/H5srcdir_str.h.in H5srcdir_str.h  @ON
 macro (HL_ADD_EXE hl_name)
   add_executable (hl_${hl_name} ${hl_name}.c)
   target_compile_options(hl_${hl_name} PRIVATE "${HDF5_CMAKE_C_FLAGS}")
-  target_include_directories (hl_${hl_name} PRIVATE "${HDF5_TEST_SRC_DIR};${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (hl_${hl_name} PRIVATE "${HDF5_TEST_SRC_DIR};${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   if (NOT BUILD_SHARED_LIBS)
     TARGET_C_PROPERTIES (hl_${hl_name} STATIC)
     target_link_libraries (hl_${hl_name} PRIVATE
@@ -58,7 +58,7 @@ HL_ADD_EXE (test_h5do_compat)
 # test_packet has two source files
 add_executable (hl_test_packet test_packet.c test_packet_vlen.c)
 target_compile_options(hl_test_packet PRIVATE "${HDF5_CMAKE_C_FLAGS}")
-target_include_directories (hl_test_packet PRIVATE "${HDF5_TEST_SRC_DIR};${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+target_include_directories (hl_test_packet PRIVATE "${HDF5_TEST_SRC_DIR};${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
 if (NOT BUILD_SHARED_LIBS)
   TARGET_C_PROPERTIES (hl_test_packet STATIC)
   target_link_libraries (hl_test_packet PRIVATE
@@ -90,7 +90,7 @@ endif ()
 if (HDF5_BUILD_GENERATORS AND BUILD_STATIC_LIBS)
   add_executable (hl_gen_test_ds gen_test_ds.c)
   target_compile_options(hl_gen_test_ds PRIVATE "${HDF5_CMAKE_C_FLAGS}")
-  target_include_directories (hl_gen_test_ds PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (hl_gen_test_ds PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   TARGET_C_PROPERTIES (hl_gen_test_ds STATIC)
   target_link_libraries (hl_gen_test_ds PRIVATE
       ${HDF5_HL_LIB_TARGET}
@@ -108,7 +108,7 @@ if (HDF5_BUILD_GENERATORS AND BUILD_STATIC_LIBS)
 
   add_executable (hl_gen_test_ld gen_test_ld.c)
   target_compile_options(hl_gen_test_ld PRIVATE "${HDF5_CMAKE_C_FLAGS}")
-  target_include_directories (hl_gen_test_ld PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (hl_gen_test_ld PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   TARGET_C_PROPERTIES (hl_gen_test_ld STATIC)
   target_link_libraries (hl_gen_test_ld PRIVATE
       ${HDF5_HL_LIB_TARGET}
diff --git a/hl/tools/gif2h5/CMakeLists.txt b/hl/tools/gif2h5/CMakeLists.txt
index a797c80..8f18b09 100644
--- a/hl/tools/gif2h5/CMakeLists.txt
+++ b/hl/tools/gif2h5/CMakeLists.txt
@@ -17,7 +17,7 @@ set (GIF2H5_SOURCES
 if (BUILD_STATIC_LIBS)
   add_executable (gif2h5 ${GIF2H5_SOURCES})
   target_compile_options(gif2h5 PRIVATE "${HDF5_CMAKE_C_FLAGS}")
-  target_include_directories (gif2h5 PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (gif2h5 PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   TARGET_C_PROPERTIES (gif2h5 STATIC)
   target_link_libraries (gif2h5 PRIVATE ${HDF5_HL_LIB_TARGET} ${HDF5_LIB_TARGET} ${HDF5_TOOLS_LIB_TARGET})
   set_target_properties (gif2h5 PROPERTIES FOLDER tools/hl)
@@ -30,7 +30,7 @@ endif ()
 if (BUILD_SHARED_LIBS)
   add_executable (gif2h5-shared ${GIF2H5_SOURCES})
   target_compile_options(gif2h5-shared PRIVATE "${HDF5_CMAKE_C_FLAGS}")
-  target_include_directories (gif2h5-shared PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (gif2h5-shared PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   TARGET_C_PROPERTIES (gif2h5-shared SHARED)
   target_link_libraries (gif2h5-shared PRIVATE ${HDF5_HL_LIBSH_TARGET} ${HDF5_LIBSH_TARGET} ${HDF5_TOOLS_LIBSH_TARGET})
   set_target_properties (gif2h5-shared PROPERTIES FOLDER tools/hl)
@@ -59,7 +59,7 @@ set (hdf2gif_SOURCES
 if (BUILD_STATIC_LIBS)
   add_executable (h52gif ${hdf2gif_SOURCES})
   target_compile_options(h52gif PRIVATE "${HDF5_CMAKE_C_FLAGS}")
-  target_include_directories (h52gif PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h52gif PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   TARGET_C_PROPERTIES (h52gif STATIC)
   target_link_libraries (h52gif PRIVATE ${HDF5_HL_LIB_TARGET} ${HDF5_LIB_TARGET} ${HDF5_TOOLS_LIB_TARGET})
   set_target_properties (h52gif PROPERTIES FOLDER tools/hl)
@@ -72,7 +72,7 @@ endif ()
 if (BUILD_SHARED_LIBS)
   add_executable (h52gif-shared ${hdf2gif_SOURCES})
   target_compile_options(h52gif-shared PRIVATE "${HDF5_CMAKE_C_FLAGS}")
-  target_include_directories (h52gif-shared PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h52gif-shared PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   TARGET_C_PROPERTIES (h52gif-shared SHARED)
   target_link_libraries (h52gif-shared PRIVATE ${HDF5_HL_LIBSH_TARGET} PRIVATE ${HDF5_LIBSH_TARGET} ${HDF5_TOOLS_LIBSH_TARGET})
   set_target_properties (h52gif-shared PROPERTIES FOLDER tools/hl)
@@ -101,7 +101,7 @@ if (BUILD_TESTING AND HDF5_TEST_SERIAL)
   # --------------------------------------------------------------------
   if (HDF5_BUILD_GENERATORS AND BUILD_STATIC_LIBS)
       add_executable (hl_h52gifgentest ${HDF5_HL_TOOLS_GIF2H5_SOURCE_DIR}/h52gifgentst.c)
-      target_include_directories (hl_h52gifgentest PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+      target_include_directories (hl_h52gifgentest PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
       TARGET_C_PROPERTIES (hl_h52gifgentest STATIC)
       target_link_libraries (hl_h52gifgentest PRIVATE ${HDF5_HL_LIB_TARGET} ${HDF5_LIB_TARGET})
       set_target_properties (hl_h52gifgentest PROPERTIES FOLDER generator/tools/hl)
diff --git a/hl/tools/h5watch/CMakeLists.txt b/hl/tools/h5watch/CMakeLists.txt
index 6c667c7..9d07a1e 100644
--- a/hl/tools/h5watch/CMakeLists.txt
+++ b/hl/tools/h5watch/CMakeLists.txt
@@ -12,7 +12,7 @@ set (H5WATCH_SOURCES
 if (BUILD_STATIC_LIBS)
   add_executable (h5watch ${H5WATCH_SOURCES})
   target_compile_options(h5watch PRIVATE "${HDF5_CMAKE_C_FLAGS}")
-  target_include_directories (h5watch PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5watch PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   TARGET_C_PROPERTIES (h5watch STATIC)
   target_link_libraries (h5watch PRIVATE ${HDF5_HL_LIB_TARGET} ${HDF5_LIB_TARGET} ${HDF5_TOOLS_LIB_TARGET})
   set_target_properties (h5watch PROPERTIES FOLDER tools/hl)
@@ -21,7 +21,7 @@ endif ()
 if (BUILD_SHARED_LIBS)
   add_executable (h5watch-shared ${H5WATCH_SOURCES})
   target_compile_options(h5watch-shared PRIVATE "${HDF5_CMAKE_C_FLAGS}")
-  target_include_directories (h5watch-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5watch-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   TARGET_C_PROPERTIES (h5watch-shared SHARED)
   target_link_libraries (h5watch-shared PRIVATE ${HDF5_HL_LIBSH_TARGET} ${HDF5_LIBSH_TARGET} ${HDF5_TOOLS_LIBSH_TARGET})
   set_target_properties (h5watch-shared PROPERTIES FOLDER tools/hl)
@@ -46,7 +46,7 @@ if (BUILD_TESTING AND HDF5_TEST_SWMR AND HDF5_TEST_SERIAL)
   )
   add_executable (extend_dset ${extend_dset_SOURCES})
   target_compile_options(extend_dset PRIVATE "${HDF5_CMAKE_C_FLAGS}")
-  target_include_directories (extend_dset PRIVATE "${HDF5_HL_SRC_DIR}/test;${HDF5_HL_SRC_DIR}/src;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (extend_dset PRIVATE "${HDF5_HL_SRC_DIR}/test;${HDF5_HL_SRC_DIR}/src;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   if (BUILD_STATIC_LIBS)
     TARGET_C_PROPERTIES (extend_dset STATIC)
     target_link_libraries (extend_dset PRIVATE ${HDF5_HL_LIB_TARGET} ${HDF5_TEST_LIB_TARGET} ${HDF5_LIB_TARGET} ${HDF5_TOOLS_LIB_TARGET})
@@ -65,7 +65,7 @@ if (BUILD_TESTING AND HDF5_TEST_SWMR AND HDF5_TEST_SERIAL)
 
   add_executable (h5watchgentest ${HDF5_HL_TOOLS_H5WATCH_SOURCE_DIR}/h5watchgentest.c)
   target_compile_options(h5watchgentest PRIVATE "${HDF5_CMAKE_C_FLAGS}")
-  target_include_directories (h5watchgentest PRIVATE "${HDF5_HL_SRC_DIR}/src;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5watchgentest PRIVATE "${HDF5_HL_SRC_DIR}/src;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   if (BUILD_STATIC_LIBS)
     TARGET_C_PROPERTIES (h5watchgentest STATIC)
     target_link_libraries (h5watchgentest PRIVATE ${HDF5_HL_LIB_TARGET} ${HDF5_LIB_TARGET})
diff --git a/java/examples/datasets/CMakeLists.txt b/java/examples/datasets/CMakeLists.txt
index e63ead0..b8036e5 100644
--- a/java/examples/datasets/CMakeLists.txt
+++ b/java/examples/datasets/CMakeLists.txt
@@ -93,7 +93,8 @@ if (BUILD_TESTING AND HDF5_TEST_EXAMPLES AND HDF5_TEST_SERIAL)
     else ()
       add_test (
           NAME JAVA_datasets-${example}-clear-objects
-          COMMAND ${CMAKE_COMMAND} -E remove ${HDFJAVA_EXAMPLES_BINARY_DIR}/${example}.h5
+          COMMAND ${CMAKE_COMMAND} -E remove
+              ${HDFJAVA_EXAMPLES_BINARY_DIR}/${example}.h5
       )
     endif ()
 
diff --git a/java/examples/datatypes/CMakeLists.txt b/java/examples/datatypes/CMakeLists.txt
index 4512221..26fb116 100644
--- a/java/examples/datatypes/CMakeLists.txt
+++ b/java/examples/datatypes/CMakeLists.txt
@@ -70,7 +70,8 @@ if (BUILD_TESTING AND HDF5_TEST_EXAMPLES AND HDF5_TEST_SERIAL)
   foreach (example ${HDF_JAVA_EXAMPLES})
     add_test (
         NAME JAVA_datatypes-${example}-clear-objects
-        COMMAND ${CMAKE_COMMAND} -E remove ${HDFJAVA_EXAMPLES_BINARY_DIR}/${example}.h5
+        COMMAND ${CMAKE_COMMAND} -E remove
+            ${HDFJAVA_EXAMPLES_BINARY_DIR}/${example}.h5
     )
 
     add_test (
diff --git a/java/examples/groups/CMakeLists.txt b/java/examples/groups/CMakeLists.txt
index 9f20abf..a3b328f 100644
--- a/java/examples/groups/CMakeLists.txt
+++ b/java/examples/groups/CMakeLists.txt
@@ -78,7 +78,8 @@ if (BUILD_TESTING AND HDF5_TEST_EXAMPLES AND HDF5_TEST_SERIAL)
       else ()
         add_test (
             NAME JAVA_groups-${example}-clear-objects
-            COMMAND ${CMAKE_COMMAND} -E remove ${HDFJAVA_EXAMPLES_BINARY_DIR}/${example}.h5
+            COMMAND ${CMAKE_COMMAND} -E remove
+                ${HDFJAVA_EXAMPLES_BINARY_DIR}/${example}.h5
         )
       endif ()
     else ()
diff --git a/java/examples/intro/CMakeLists.txt b/java/examples/intro/CMakeLists.txt
index a5e2a67..0a96173 100644
--- a/java/examples/intro/CMakeLists.txt
+++ b/java/examples/intro/CMakeLists.txt
@@ -59,7 +59,8 @@ if (BUILD_TESTING AND HDF5_TEST_EXAMPLES AND HDF5_TEST_SERIAL)
   foreach (example ${HDF_JAVA_EXAMPLES})
     add_test (
         NAME JAVA_intro-${example}-clear-objects
-        COMMAND ${CMAKE_COMMAND} -E remove ${HDFJAVA_EXAMPLES_BINARY_DIR}/${example}.h5
+        COMMAND ${CMAKE_COMMAND} -E remove
+            ${HDFJAVA_EXAMPLES_BINARY_DIR}/${example}.h5
     )
 
     add_test (
diff --git a/java/src/hdf/hdf5lib/exceptions/package-info.java b/java/src/hdf/hdf5lib/exceptions/package-info.java
index fa261ca..784e57d 100644
--- a/java/src/hdf/hdf5lib/exceptions/package-info.java
+++ b/java/src/hdf/hdf5lib/exceptions/package-info.java
@@ -28,4 +28,4 @@
  * error code returned by the HDF5 library.
  *
  */
-package hdf.hdf5lib.exceptions;
-\ No newline at end of file
+package hdf.hdf5lib.exceptions;
diff --git a/java/src/hdf/hdf5lib/structs/H5FD_hdfs_fapl_t.java b/java/src/hdf/hdf5lib/structs/H5FD_hdfs_fapl_t.java
index 181d681..9861334 100644
--- a/java/src/hdf/hdf5lib/structs/H5FD_hdfs_fapl_t.java
+++ b/java/src/hdf/hdf5lib/structs/H5FD_hdfs_fapl_t.java
@@ -1,6 +1,5 @@
 /* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
  * Copyright by The HDF Group.                                               *
- *                                                                           *
  * All rights reserved.                                                      *
  *                                                                           *
  * This file is part of HDF5.  The full HDF5 copyright notice, including     *
diff --git a/java/src/hdf/hdf5lib/structs/H5FD_ros3_fapl_t.java b/java/src/hdf/hdf5lib/structs/H5FD_ros3_fapl_t.java
index 67c2463..62b2921 100644
--- a/java/src/hdf/hdf5lib/structs/H5FD_ros3_fapl_t.java
+++ b/java/src/hdf/hdf5lib/structs/H5FD_ros3_fapl_t.java
@@ -1,6 +1,5 @@
 /* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
  * Copyright by The HDF Group.                                               *
- *                                                                           *
  * All rights reserved.                                                      *
  *                                                                           *
  * This file is part of HDF5.  The full HDF5 copyright notice, including     *
diff --git a/java/src/jni/CMakeLists.txt b/java/src/jni/CMakeLists.txt
index 5d6aebf..56a1ab8 100644
--- a/java/src/jni/CMakeLists.txt
+++ b/java/src/jni/CMakeLists.txt
@@ -76,7 +76,7 @@ set (CMAKE_INCLUDE_CURRENT_DIR_IN_INTERFACE ON)
 ########### JNI libraries always must be built shared  ###############
 add_library (${HDF5_JAVA_JNI_LIB_TARGET} SHARED ${HDF5_JAVA_JNI_CSRCS} ${HDF5_JAVA_JNI_CHDRS})
 target_include_directories (${HDF5_JAVA_JNI_LIB_TARGET}
-    PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};${HDF5_JAVA_JNI_SOURCE_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>"
+    PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};${HDF5_JAVA_JNI_SOURCE_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>"
 )
 target_compile_options(${HDF5_JAVA_JNI_LIB_TARGET} PRIVATE "${HDF5_CMAKE_C_FLAGS}")
 TARGET_C_PROPERTIES (${HDF5_JAVA_JNI_LIB_TARGET} SHARED)
diff --git a/release_docs/README_HPC b/release_docs/README_HPC
index a44a461..4aa3e84 100644
--- a/release_docs/README_HPC
+++ b/release_docs/README_HPC
@@ -39,6 +39,9 @@ If no branch is specified, then the 'develop' version will be checked out.
 If no source directory is specified, then the source will be located in the
 'hdf5' directory. The CMake scripts expect the source to be in a directory
 named hdf5-<version string>, where 'version string' uses the format '1.xx.xx'.
+For example, for the current 'develop' version, the "hdf5" directory should
+be renamed "hdf5-1.13.0", or for the first hdf5_1_12_0 pre-release version,
+it should be renamed "hdf5-1.12.0-5".
 
 If the version number is not known a priori, the version string
 can be obtained by running bin/h5vers in the top level directory of the source clone, and
@@ -62,14 +65,15 @@ scripts on compute nodes and to cross-compile for compute node hardware using
 a cross-compiling emulator.  The setup steps will make default settings for
 parallel or serial only builds available to the CMake command.
 
-    1. The "hdf5" directory should be renamed hdf5-<version string> (see section II).
+    1. For the current 'develop' version the "hdf5" directory should be renamed
+       "hdf5-1.13.0".
 
     2. Three cmake script files need to be copied to the working directory, or
        have symbolic links to them, created in the working directory:
 
-       hdf5-<version string>/config/cmake/scripts/HDF5config.cmake
-       hdf5-<version string>/config/cmake/scripts/CTestScript.cmake
-       hdf5-<version string>/config/cmake/scripts/HDF5options.cmake
+       hdf5-1.13.0/config/cmake/scripts/HDF5config.cmake
+       hdf5-1.13.0/config/cmake/scripts/CTestScript.cmake
+       hdf5-1.13.0/config/cmake/scripts/HDF5options.cmake
 
        should be copied to the working directory.
 
@@ -78,7 +82,7 @@ parallel or serial only builds available to the CMake command.
        CTestScript.cmake
        HDF5config.cmake
        HDF5options.cmake
-       hdf5-<version string>
+       hdf5-1.13.0
 
        Additionally, when the ctest command runs [1], it will add a build directory
        in the working directory.
@@ -141,7 +145,7 @@ cori, another CrayXC40, that line is replaced by "#SBATCH -C knl,quad,cache".
 For cori (and other machines), the values in LOCAL_BATCH_SCRIPT_NAME and
 LOCAL_BATCH_SCRIPT_PARALLEL_NAME in the config/cmake/scripts/HPC/sbatch-HDF5options.cmake
 file can be replaced by cori_knl_ctestS.sl and cori_knl_ctestS.sl, or the lines
-can be edited in the batch files in hdf5-<version string(see section II)>/bin/batch.
+can be edited in the batch files in hdf5-1.13.0/bin/batch.
 
 ========================================================================
 V. Manual alternatives
@@ -149,11 +153,11 @@ V. Manual alternatives
 If using ctest is undesirable, one can create a build directory and run the cmake
 configure command, for example
 
-"/projects/Mutrino/hpcsoft/cle6.0/common/cmake/<CMake version>/bin/cmake"
--C "<working directory>/hdf5-<version string>/config/cmake/cacheinit.cmake"
+"/projects/Mutrino/hpcsoft/cle6.0/common/cmake/3.12/bin/cmake"
+-C "<working directory>/hdf5-1.10.x/config/cmake/cacheinit.cmake"
 -DCMAKE_BUILD_TYPE:STRING=Release -DHDF5_BUILD_FORTRAN:BOOL=ON
 -DHDF5_BUILD_JAVA:BOOL=OFF
--DCMAKE_INSTALL_PREFIX:PATH=<working directory>/HDF_Group/HDF5/<version string>
+-DCMAKE_INSTALL_PREFIX:PATH=<working directory>/HDF_Group/HDF5/1.10.x
 -DHDF5_ENABLE_Z_LIB_SUPPORT:BOOL=OFF -DHDF5_ENABLE_SZIP_SUPPORT:BOOL=OFF
 -DHDF5_ENABLE_PARALLEL:BOOL=ON -DHDF5_BUILD_CPP_LIB:BOOL=OFF
 -DHDF5_BUILD_JAVA:BOOL=OFF -DHDF5_ENABLE_THREADSAFE:BOOL=OFF
@@ -164,7 +168,7 @@ configure command, for example
 -DLOCAL_BATCH_SCRIPT_NAME:STRING=knl_ctestS.sl
 -DLOCAL_BATCH_SCRIPT_PARALLEL_NAME:STRING=knl_ctestP.sl -DSITE:STRING=mutrino
 -DBUILDNAME:STRING=par-knl_GCC493-SHARED-Linux-4.4.156-94.61.1.16335.0.PTF.1107299-default-x86_64
-"-GUnix Makefiles" "" "<working directory>/hdf5-<version string>"
+"-GUnix Makefiles" "" "<working directory>/hdf5-1.10.x"
 
 followed by make and batch jobs to run tests.
 
diff --git a/release_docs/RELEASE.txt b/release_docs/RELEASE.txt
index 9263a63..1beee82 100644
--- a/release_docs/RELEASE.txt
+++ b/release_docs/RELEASE.txt
@@ -21,7 +21,7 @@ The official HDF5 releases can be obtained from:
 
      https://www.hdfgroup.org/downloads/hdf5/
 
-Changes from Release to Release and New Features in the HDF5-1.10.x release series
+Changes from release to release and new features in the HDF5-1.10.x release series
 can be found at:
 
      https://portal.hdfgroup.org/display/HDF5/HDF5+Application+Developer%27s+Guide
@@ -72,7 +72,7 @@ New Features
       (DER - 2023/03/17)
 
     - Added new option to build libaec and zlib inline with CMake.
-      
+
       Using the CMake FetchContent module, the external filters can populate
       content at configure time via any method supported by the ExternalProject
       module. Whereas ExternalProject_Add() downloads at build time, the
diff --git a/src/CMakeLists.txt b/src/CMakeLists.txt
index 6f32cd1..f7e29d4 100644
--- a/src/CMakeLists.txt
+++ b/src/CMakeLists.txt
@@ -946,7 +946,7 @@ endif ()
 #### make the H5detect program
 set (lib_prog_deps)
 add_executable (H5detect ${HDF5_SRC_DIR}/H5detect.c)
-target_include_directories (H5detect PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+target_include_directories (H5detect PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
 target_compile_definitions(H5detect PUBLIC ${HDF_EXTRA_C_FLAGS} ${HDF_EXTRA_FLAGS})
 TARGET_C_PROPERTIES (H5detect STATIC)
 target_link_libraries (H5detect
@@ -1040,7 +1040,7 @@ endif ()
 
 # make the H5make_libsettings program
 add_executable (H5make_libsettings ${HDF5_SRC_DIR}/H5make_libsettings.c)
-target_include_directories (H5make_libsettings PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+target_include_directories (H5make_libsettings PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
 target_compile_definitions(H5make_libsettings PUBLIC ${HDF_EXTRA_C_FLAGS} ${HDF_EXTRA_FLAGS})
 TARGET_C_PROPERTIES (H5make_libsettings STATIC)
 target_link_libraries (H5make_libsettings
@@ -1101,7 +1101,7 @@ if (BUILD_STATIC_LIBS)
 
   add_library (${HDF5_LIB_TARGET} STATIC ${common_SRCS} ${gen_SRCS} ${H5_PUBLIC_HEADERS} ${H5_PRIVATE_HEADERS} ${H5_GENERATED_HEADERS} ${H5_MODULE_HEADERS})
   target_include_directories (${HDF5_LIB_TARGET}
-      PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>"
+      PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>"
       INTERFACE "$<INSTALL_INTERFACE:$<INSTALL_PREFIX>/include>;$<BUILD_INTERFACE:${HDF5_SRC_BINARY_DIR}>"
   )
   target_compile_options(${HDF5_LIB_TARGET} PRIVATE "${HDF5_CMAKE_C_FLAGS}")
@@ -1140,7 +1140,7 @@ if (BUILD_SHARED_LIBS)
 
   add_library (${HDF5_LIBSH_TARGET} SHARED ${common_SRCS} ${shared_gen_SRCS} ${H5_PUBLIC_HEADERS} ${H5_PRIVATE_HEADERS} ${H5_GENERATED_HEADERS} ${H5_MODULE_HEADERS})
   target_include_directories (${HDF5_LIBSH_TARGET}
-      PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>"
+      PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>"
       PUBLIC "$<$<BOOL:${HDF5_ENABLE_HDFS}>:${HDFS_INCLUDE_DIR}>"
       INTERFACE "$<INSTALL_INTERFACE:$<INSTALL_PREFIX>/include>;$<BUILD_INTERFACE:${HDF5_SRC_BINARY_DIR}>"
   )
diff --git a/test/CMakeLists.txt b/test/CMakeLists.txt
index 67338fc..21af76b 100644
--- a/test/CMakeLists.txt
+++ b/test/CMakeLists.txt
@@ -30,7 +30,7 @@ set (TEST_LIB_HEADERS
 if (BUILD_STATIC_LIBS)
   add_library (${HDF5_TEST_LIB_TARGET} STATIC ${TEST_LIB_SOURCES} ${TEST_LIB_HEADERS})
   target_include_directories (${HDF5_TEST_LIB_TARGET}
-      PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};${HDF5_TEST_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>"
+      PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};${HDF5_TEST_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>"
       INTERFACE "$<INSTALL_INTERFACE:$<INSTALL_PREFIX>/include>"
   )
   target_compile_options(${HDF5_TEST_LIB_TARGET} PRIVATE "${HDF5_CMAKE_C_FLAGS}")
@@ -52,7 +52,7 @@ endif ()
 if (BUILD_SHARED_LIBS)
   add_library (${HDF5_TEST_LIBSH_TARGET} SHARED ${TEST_LIB_SOURCES} ${TEST_LIB_HEADERS})
   target_include_directories (${HDF5_TEST_LIBSH_TARGET}
-      PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};${HDF5_TEST_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>"
+      PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};${HDF5_TEST_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>"
       INTERFACE "$<INSTALL_INTERFACE:$<INSTALL_PREFIX>/include>"
   )
   target_compile_options(${HDF5_TEST_LIBSH_TARGET} PRIVATE "${HDF5_CMAKE_C_FLAGS}")
@@ -109,7 +109,7 @@ if (BUILD_SHARED_LIBS)
     set (HDF5_TEST_PLUGIN_TARGET            ${HDF5_TEST_PLUGIN_CORENAME})
 
     add_library (${HDF5_TEST_PLUGIN_TARGET} SHARED ${HDF5_TEST_SOURCE_DIR}/${plugin_name}.c)
-    target_include_directories (${HDF5_TEST_PLUGIN_TARGET} PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+    target_include_directories (${HDF5_TEST_PLUGIN_TARGET} PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
     TARGET_C_PROPERTIES (${HDF5_TEST_PLUGIN_TARGET} SHARED)
     target_link_libraries (${HDF5_TEST_PLUGIN_TARGET} PUBLIC ${HDF5_TEST_LIBSH_TARGET})
     H5_SET_LIB_OPTIONS (${HDF5_TEST_PLUGIN_TARGET} ${HDF5_TEST_PLUGIN_NAME} SHARED "LIB")
@@ -141,7 +141,7 @@ if (BUILD_SHARED_LIBS)
     set (HDF5_TEST_PLUGIN_TARGET            ${HDF5_TEST_PLUGIN_CORENAME})
 
     add_library (${HDF5_TEST_PLUGIN_TARGET} SHARED ${HDF5_TEST_SOURCE_DIR}/${plugin_name}.c)
-    target_include_directories (${HDF5_TEST_PLUGIN_TARGET} PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+    target_include_directories (${HDF5_TEST_PLUGIN_TARGET} PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
     TARGET_C_PROPERTIES (${HDF5_TEST_PLUGIN_TARGET} SHARED)
     target_link_libraries (${HDF5_TEST_PLUGIN_TARGET} PUBLIC ${HDF5_TEST_LIBSH_TARGET})
     H5_SET_LIB_OPTIONS (${HDF5_TEST_PLUGIN_TARGET} ${HDF5_TEST_PLUGIN_NAME} SHARED "LIB")
@@ -297,7 +297,7 @@ endif ()
 
 macro (ADD_H5_EXE file)
   add_executable (${file} ${HDF5_TEST_SOURCE_DIR}/${file}.c)
-  target_include_directories (${file} PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};${HDF5_TEST_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (${file} PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};${HDF5_TEST_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   target_compile_options(${file} PRIVATE "${HDF5_CMAKE_C_FLAGS}")
   if (NOT BUILD_SHARED_LIBS)
     TARGET_C_PROPERTIES (${file} STATIC)
@@ -339,7 +339,7 @@ endforeach ()
 #-- Adding test for chunk_info
 add_executable (chunk_info ${HDF5_TEST_SOURCE_DIR}/chunk_info.c)
 target_compile_options(chunk_info PRIVATE "${HDF5_CMAKE_C_FLAGS}")
-target_include_directories (chunk_info PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};${HDF5_TEST_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+target_include_directories (chunk_info PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};${HDF5_TEST_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
 if (NOT BUILD_SHARED_LIBS)
   TARGET_C_PROPERTIES (chunk_info STATIC)
   target_link_libraries (chunk_info PRIVATE ${HDF5_TEST_LIB_TARGET} ${LINK_COMP_LIBS})
@@ -359,7 +359,7 @@ endif ()
 #-- Adding test for direct_chunk
 add_executable (direct_chunk ${HDF5_TEST_SOURCE_DIR}/direct_chunk.c)
 target_compile_options(direct_chunk PRIVATE "${HDF5_CMAKE_C_FLAGS}")
-target_include_directories (direct_chunk PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};${HDF5_TEST_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+target_include_directories (direct_chunk PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};${HDF5_TEST_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
 if (NOT BUILD_SHARED_LIBS)
   TARGET_C_PROPERTIES (direct_chunk STATIC)
   target_link_libraries (direct_chunk PRIVATE ${HDF5_TEST_LIB_TARGET} ${LINK_COMP_LIBS})
@@ -380,7 +380,7 @@ endif ()
 #-- Adding test for testhdf5
 add_executable (testhdf5 ${testhdf5_SOURCES})
 target_compile_options(testhdf5 PRIVATE "${HDF5_CMAKE_C_FLAGS}")
-target_include_directories (testhdf5 PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+target_include_directories (testhdf5 PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
 if (NOT BUILD_SHARED_LIBS)
   TARGET_C_PROPERTIES (testhdf5 STATIC)
   target_link_libraries (testhdf5 PRIVATE ${HDF5_TEST_LIB_TARGET})
@@ -400,7 +400,7 @@ endif ()
 #-- Adding test for cache_image
 add_executable (cache_image ${cache_image_SOURCES})
 target_compile_options(cache_image PRIVATE "${HDF5_CMAKE_C_FLAGS}")
-target_include_directories (cache_image PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+target_include_directories (cache_image PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
 if (NOT BUILD_SHARED_LIBS)
   TARGET_C_PROPERTIES (cache_image STATIC)
   target_link_libraries (cache_image PRIVATE ${HDF5_TEST_LIB_TARGET})
@@ -420,7 +420,7 @@ endif ()
 #-- Adding test for ttsafe
 add_executable (ttsafe ${ttsafe_SOURCES})
 target_compile_options(ttsafe PRIVATE "${HDF5_CMAKE_C_FLAGS}")
-target_include_directories (ttsafe PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+target_include_directories (ttsafe PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
 if (NOT BUILD_SHARED_LIBS)
   TARGET_C_PROPERTIES (ttsafe STATIC)
   target_link_libraries (ttsafe PRIVATE ${HDF5_TEST_LIB_TARGET})
@@ -446,7 +446,7 @@ endif ()
 #-- Adding test for thread_id
 add_executable (thread_id ${HDF5_TEST_SOURCE_DIR}/thread_id.c)
 target_compile_options(thread_id PRIVATE "${HDF5_CMAKE_C_FLAGS}")
-target_include_directories (thread_id PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+target_include_directories (thread_id PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
 if (NOT BUILD_SHARED_LIBS)
   TARGET_C_PROPERTIES (thread_id STATIC)
   target_link_libraries (thread_id PRIVATE ${HDF5_TEST_LIB_TARGET})
@@ -471,7 +471,7 @@ endif ()
 if (HDF5_BUILD_UTILS) # requires mirror server
   #-- Adding test for mirror_vfd
   add_executable (mirror_vfd ${mirror_vfd_SOURCES})
-  target_include_directories (mirror_vfd PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (mirror_vfd PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   if (NOT BUILD_SHARED_LIBS)
     TARGET_C_PROPERTIES (mirror_vfd STATIC)
     target_link_libraries (mirror_vfd PRIVATE ${HDF5_TEST_LIB_TARGET})
@@ -550,7 +550,7 @@ set (H5_VDS_SWMR_TESTS
 
 macro (ADD_H5_VDS_EXE file)
   add_executable (${file} ${HDF5_TEST_SOURCE_DIR}/${file}.c ${HDF5_TEST_SOURCE_DIR}/vds_swmr.h)
-  target_include_directories (${file} PRIVATE "${HDF5_SRC_DIR};${HDF5_BINARY_DIR};${HDF5_TEST_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (${file} PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_BINARY_DIR};${HDF5_TEST_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   target_compile_options(${file} PRIVATE "${HDF5_CMAKE_C_FLAGS}")
   if (NOT BUILD_SHARED_LIBS)
     TARGET_C_PROPERTIES (${file} STATIC)
@@ -578,7 +578,7 @@ endforeach ()
 #   and it can't be renamed (i.e., no <foo>-shared).
 add_executable (accum_swmr_reader ${HDF5_TEST_SOURCE_DIR}/accum_swmr_reader.c)
 target_compile_options(accum_swmr_reader PRIVATE "${HDF5_CMAKE_C_FLAGS}")
-target_include_directories (accum_swmr_reader PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+target_include_directories (accum_swmr_reader PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
 if (NOT BUILD_SHARED_LIBS)
   TARGET_C_PROPERTIES (accum_swmr_reader STATIC)
   target_link_libraries (accum_swmr_reader PRIVATE ${HDF5_TEST_LIB_TARGET} ${HDF5_LIB_TARGET})
@@ -603,7 +603,7 @@ set_target_properties (accum PROPERTIES DEPENDS accum_swmr_reader)
 ##############################################################################
 if (BUILD_SHARED_LIBS)
   add_executable (filter_plugin ${HDF5_TEST_SOURCE_DIR}/filter_plugin.c)
-  target_include_directories (filter_plugin PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (filter_plugin PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   TARGET_C_PROPERTIES (filter_plugin SHARED)
   target_link_libraries (filter_plugin PRIVATE ${HDF5_TEST_LIBSH_TARGET})
   set_target_properties (filter_plugin PROPERTIES FOLDER test)
@@ -622,7 +622,7 @@ endif ()
 set (use_append_chunk_SOURCES ${HDF5_TEST_SOURCE_DIR}/use_append_chunk.c ${HDF5_TEST_SOURCE_DIR}/use_common.c ${HDF5_TEST_SOURCE_DIR}/use.h)
 add_executable (use_append_chunk ${use_append_chunk_SOURCES})
 target_compile_options(use_append_chunk PRIVATE "${HDF5_CMAKE_C_FLAGS}")
-target_include_directories (use_append_chunk PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+target_include_directories (use_append_chunk PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
 if (NOT BUILD_SHARED_LIBS)
   TARGET_C_PROPERTIES (use_append_chunk STATIC)
   target_link_libraries (use_append_chunk PRIVATE ${HDF5_TEST_LIB_TARGET})
@@ -642,7 +642,7 @@ endif ()
 set (use_append_mchunks_SOURCES ${HDF5_TEST_SOURCE_DIR}/use_append_mchunks.c ${HDF5_TEST_SOURCE_DIR}/use_common.c ${HDF5_TEST_SOURCE_DIR}/use.h)
 add_executable (use_append_mchunks ${use_append_mchunks_SOURCES})
 target_compile_options(use_append_mchunks PRIVATE "${HDF5_CMAKE_C_FLAGS}")
-target_include_directories (use_append_mchunks PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+target_include_directories (use_append_mchunks PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
 if (NOT BUILD_SHARED_LIBS)
   TARGET_C_PROPERTIES (use_append_mchunks STATIC)
   target_link_libraries (use_append_mchunks PRIVATE ${HDF5_TEST_LIB_TARGET})
@@ -662,7 +662,7 @@ endif ()
 set (use_disable_mdc_flushes_SOURCES ${HDF5_TEST_SOURCE_DIR}/use_disable_mdc_flushes.c)
 add_executable (use_disable_mdc_flushes ${use_disable_mdc_flushes_SOURCES})
 target_compile_options(use_disable_mdc_flushes PRIVATE "${HDF5_CMAKE_C_FLAGS}")
-target_include_directories (use_disable_mdc_flushes PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+target_include_directories (use_disable_mdc_flushes PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
 if (NOT BUILD_SHARED_LIBS)
   TARGET_C_PROPERTIES (use_disable_mdc_flushes STATIC)
   target_link_libraries (use_disable_mdc_flushes PRIVATE ${HDF5_TEST_LIB_TARGET})
diff --git a/testpar/CMakeLists.txt b/testpar/CMakeLists.txt
index 4b376c7..2dde7ae 100644
--- a/testpar/CMakeLists.txt
+++ b/testpar/CMakeLists.txt
@@ -24,7 +24,7 @@ set (testphdf5_SOURCES
 add_executable (testphdf5 ${testphdf5_SOURCES})
 target_compile_options(testphdf5 PRIVATE "${HDF5_CMAKE_C_FLAGS}")
 target_include_directories (testphdf5
-    PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>"
+    PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>"
 )
 if (NOT BUILD_SHARED_LIBS)
   TARGET_C_PROPERTIES (testphdf5 STATIC)
@@ -50,7 +50,7 @@ macro (ADD_H5P_EXE file)
   add_executable (${file} ${HDF5_TEST_PAR_SOURCE_DIR}/${file}.c)
   target_compile_options(${file} PRIVATE "${HDF5_CMAKE_C_FLAGS}")
   target_include_directories (${file}
-      PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>"
+      PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>"
   )
   if (NOT BUILD_SHARED_LIBS)
     TARGET_C_PROPERTIES (${file} STATIC)
diff --git a/tools/lib/CMakeLists.txt b/tools/lib/CMakeLists.txt
index f0e40fe..bf9d087 100644
--- a/tools/lib/CMakeLists.txt
+++ b/tools/lib/CMakeLists.txt
@@ -37,7 +37,7 @@ set (H5_TOOLS_LIB_HDRS
 if (BUILD_STATIC_LIBS)
   add_library (${HDF5_TOOLS_LIB_TARGET} STATIC ${H5_TOOLS_LIB_SOURCES} ${H5_TOOLS_LIB_HDRS})
   target_include_directories (${HDF5_TOOLS_LIB_TARGET}
-      PRIVATE "${HDF5_TOOLS_LIB_SOURCE_DIR};${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>"
+      PRIVATE "${HDF5_TOOLS_LIB_SOURCE_DIR};${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>"
       INTERFACE "$<INSTALL_INTERFACE:$<INSTALL_PREFIX>/include>"
   )
   target_compile_options(${HDF5_TOOLS_LIB_TARGET} PRIVATE "${HDF5_CMAKE_C_FLAGS}")
@@ -57,7 +57,7 @@ endif ()
 if (BUILD_SHARED_LIBS)
   add_library (${HDF5_TOOLS_LIBSH_TARGET} SHARED ${H5_TOOLS_LIB_SOURCES} ${H5_TOOLS_LIB_HDRS})
   target_include_directories (${HDF5_TOOLS_LIBSH_TARGET}
-      PRIVATE "${HDF5_TOOLS_LIB_SOURCE_DIR};${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>"
+      PRIVATE "${HDF5_TOOLS_LIB_SOURCE_DIR};${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>"
       INTERFACE "$<INSTALL_INTERFACE:$<INSTALL_PREFIX>/include>"
   )
   target_compile_options(${HDF5_TOOLS_LIBSH_TARGET} PRIVATE "${HDF5_CMAKE_C_FLAGS}")
diff --git a/tools/libtest/CMakeLists.txt b/tools/libtest/CMakeLists.txt
index 33df35b..a7d2eb3 100644
--- a/tools/libtest/CMakeLists.txt
+++ b/tools/libtest/CMakeLists.txt
@@ -6,7 +6,7 @@ project (HDF5_TOOLS_LIBTEST C)
 #-----------------------------------------------------------------------------
 add_executable (h5tools_test_utils ${HDF5_TOOLS_LIBTEST_SOURCE_DIR}/h5tools_test_utils.c)
 target_compile_options(h5tools_test_utils PRIVATE "${HDF5_CMAKE_C_FLAGS}")
-target_include_directories(h5tools_test_utils PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+target_include_directories(h5tools_test_utils PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
 if (BUILD_STATIC_LIBS)
   TARGET_C_PROPERTIES (h5tools_test_utils STATIC)
   target_link_libraries (h5tools_test_utils PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET} ${HDF5_TEST_LIB_TARGET})
diff --git a/tools/src/h5copy/CMakeLists.txt b/tools/src/h5copy/CMakeLists.txt
index 9bf98cc..686dbad 100644
--- a/tools/src/h5copy/CMakeLists.txt
+++ b/tools/src/h5copy/CMakeLists.txt
@@ -6,7 +6,7 @@ project (HDF5_TOOLS_SRC_H5COPY C)
 # --------------------------------------------------------------------
 if (BUILD_STATIC_LIBS)
   add_executable (h5copy ${HDF5_TOOLS_SRC_H5COPY_SOURCE_DIR}/h5copy.c)
-  target_include_directories (h5copy PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5copy PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   target_compile_options(h5copy PRIVATE "${HDF5_CMAKE_C_FLAGS}")
   TARGET_C_PROPERTIES (h5copy STATIC)
   target_link_libraries (h5copy PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET})
@@ -18,7 +18,7 @@ endif ()
 
 if (BUILD_SHARED_LIBS)
   add_executable (h5copy-shared ${HDF5_TOOLS_SRC_H5COPY_SOURCE_DIR}/h5copy.c)
-  target_include_directories (h5copy-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5copy-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   target_compile_options(h5copy-shared PRIVATE "${HDF5_CMAKE_C_FLAGS}")
   TARGET_C_PROPERTIES (h5copy-shared SHARED)
   target_link_libraries (h5copy-shared PRIVATE ${HDF5_TOOLS_LIBSH_TARGET} ${HDF5_LIBSH_TARGET})
diff --git a/tools/src/h5diff/CMakeLists.txt b/tools/src/h5diff/CMakeLists.txt
index 718e552..ad44a67 100644
--- a/tools/src/h5diff/CMakeLists.txt
+++ b/tools/src/h5diff/CMakeLists.txt
@@ -10,7 +10,7 @@ if (BUILD_STATIC_LIBS)
       ${HDF5_TOOLS_SRC_H5DIFF_SOURCE_DIR}/h5diff_main.c
       ${HDF5_TOOLS_SRC_H5DIFF_SOURCE_DIR}/h5diff_common.h
   )
-  target_include_directories (h5diff PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5diff PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   target_compile_options(h5diff PRIVATE "${HDF5_CMAKE_C_FLAGS}")
   #target_compile_definitions (h5diff PRIVATE H5_TOOLS_DEBUG)
   TARGET_C_PROPERTIES (h5diff STATIC)
@@ -26,7 +26,7 @@ if (BUILD_SHARED_LIBS)
       ${HDF5_TOOLS_SRC_H5DIFF_SOURCE_DIR}/h5diff_main.c
       ${HDF5_TOOLS_SRC_H5DIFF_SOURCE_DIR}/h5diff_common.h
   )
-  target_include_directories (h5diff-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5diff-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   target_compile_options(h5diff-shared PRIVATE "${HDF5_CMAKE_C_FLAGS}")
   #target_compile_definitions (h5diff-shared PRIVATE H5_TOOLS_DEBUG)
   TARGET_C_PROPERTIES (h5diff-shared SHARED)
diff --git a/tools/src/h5dump/CMakeLists.txt b/tools/src/h5dump/CMakeLists.txt
index ad39e77..b013145 100644
--- a/tools/src/h5dump/CMakeLists.txt
+++ b/tools/src/h5dump/CMakeLists.txt
@@ -15,7 +15,7 @@ if (BUILD_STATIC_LIBS)
       ${HDF5_TOOLS_SRC_H5DUMP_SOURCE_DIR}/h5dump_ddl.h
       ${HDF5_TOOLS_SRC_H5DUMP_SOURCE_DIR}/h5dump_xml.h
   )
-  target_include_directories (h5dump PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5dump PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   target_compile_options(h5dump PRIVATE "${HDF5_CMAKE_C_FLAGS}")
   TARGET_C_PROPERTIES (h5dump STATIC)
   target_link_libraries (h5dump PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET})
@@ -36,7 +36,7 @@ if (BUILD_SHARED_LIBS)
       ${HDF5_TOOLS_SRC_H5DUMP_SOURCE_DIR}/h5dump_ddl.h
       ${HDF5_TOOLS_SRC_H5DUMP_SOURCE_DIR}/h5dump_xml.h
   )
-  target_include_directories (h5dump-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5dump-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   target_compile_options(h5dump-shared PRIVATE "${HDF5_CMAKE_C_FLAGS}")
   TARGET_C_PROPERTIES (h5dump-shared SHARED)
   target_link_libraries (h5dump-shared PRIVATE ${HDF5_TOOLS_LIBSH_TARGET} ${HDF5_LIBSH_TARGET})
diff --git a/tools/src/h5format_convert/CMakeLists.txt b/tools/src/h5format_convert/CMakeLists.txt
index 59b1ff5..d6d9027 100644
--- a/tools/src/h5format_convert/CMakeLists.txt
+++ b/tools/src/h5format_convert/CMakeLists.txt
@@ -6,7 +6,7 @@ project (HDF5_TOOLS_SRC_H5FC C)
 # --------------------------------------------------------------------
 if (BUILD_STATIC_LIBS)
   add_executable (h5format_convert ${HDF5_TOOLS_SRC_H5FC_SOURCE_DIR}/h5format_convert.c)
-  target_include_directories (h5format_convert PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5format_convert PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   target_compile_options(h5format_convert PRIVATE "${HDF5_CMAKE_C_FLAGS}")
   TARGET_C_PROPERTIES (h5format_convert STATIC)
   target_link_libraries (h5format_convert PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET})
@@ -17,7 +17,7 @@ if (BUILD_STATIC_LIBS)
 endif ()
 if (BUILD_SHARED_LIBS)
   add_executable (h5format_convert-shared ${HDF5_TOOLS_SRC_H5FC_SOURCE_DIR}/h5format_convert.c)
-  target_include_directories (h5format_convert-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5format_convert-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   target_compile_options(h5format_convert-shared PRIVATE "${HDF5_CMAKE_C_FLAGS}")
   TARGET_C_PROPERTIES (h5format_convert-shared SHARED)
   target_link_libraries (h5format_convert-shared PRIVATE ${HDF5_TOOLS_LIBSH_TARGET} ${HDF5_LIBSH_TARGET})
diff --git a/tools/src/h5import/CMakeLists.txt b/tools/src/h5import/CMakeLists.txt
index bc96122..c8ee6b8 100644
--- a/tools/src/h5import/CMakeLists.txt
+++ b/tools/src/h5import/CMakeLists.txt
@@ -6,7 +6,7 @@ project (HDF5_TOOLS_SRC_H5IMPORT C)
 # --------------------------------------------------------------------
 if (BUILD_STATIC_LIBS)
   add_executable (h5import ${HDF5_TOOLS_SRC_H5IMPORT_SOURCE_DIR}/h5import.c ${HDF5_TOOLS_SRC_H5IMPORT_SOURCE_DIR}/h5import.h)
-  target_include_directories (h5import PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5import PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   TARGET_C_PROPERTIES (h5import STATIC)
   target_link_libraries (h5import PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET})
   #set_target_properties (h5import PROPERTIES COMPILE_DEFINITIONS H5DEBUGIMPORT)
@@ -18,7 +18,7 @@ endif ()
 
 if (BUILD_SHARED_LIBS)
   add_executable (h5import-shared ${HDF5_TOOLS_SRC_H5IMPORT_SOURCE_DIR}/h5import.c ${HDF5_TOOLS_SRC_H5IMPORT_SOURCE_DIR}/h5import.h)
-  target_include_directories (h5import-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5import-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   TARGET_C_PROPERTIES (h5import-shared SHARED)
   target_link_libraries (h5import-shared PRIVATE ${HDF5_TOOLS_LIBSH_TARGET} ${HDF5_LIBSH_TARGET})
   #set_target_properties (h5import-shared PROPERTIES COMPILE_DEFINITIONS H5DEBUGIMPORT)
diff --git a/tools/src/h5jam/CMakeLists.txt b/tools/src/h5jam/CMakeLists.txt
index 0755be2..aabdd00 100644
--- a/tools/src/h5jam/CMakeLists.txt
+++ b/tools/src/h5jam/CMakeLists.txt
@@ -6,14 +6,14 @@ project (HDF5_TOOLS_SRC_H5JAM C)
 # --------------------------------------------------------------------
 if (BUILD_STATIC_LIBS)
   add_executable (h5jam ${HDF5_TOOLS_SRC_H5JAM_SOURCE_DIR}/h5jam.c)
-  target_include_directories (h5jam PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5jam PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   TARGET_C_PROPERTIES (h5jam STATIC)
   target_link_libraries (h5jam PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET})
   set_target_properties (h5jam PROPERTIES FOLDER tools)
   set_global_variable (HDF5_UTILS_TO_EXPORT "${HDF5_UTILS_TO_EXPORT};h5jam")
 
   add_executable (h5unjam ${HDF5_TOOLS_SRC_H5JAM_SOURCE_DIR}/h5unjam.c)
-  target_include_directories (h5unjam PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5unjam PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   TARGET_C_PROPERTIES (h5unjam STATIC)
   target_link_libraries (h5unjam PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET})
   set_target_properties (h5unjam PROPERTIES FOLDER tools)
@@ -27,14 +27,14 @@ endif ()
 
 if (BUILD_SHARED_LIBS)
   add_executable (h5jam-shared ${HDF5_TOOLS_SRC_H5JAM_SOURCE_DIR}/h5jam.c)
-  target_include_directories (h5jam-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5jam-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   TARGET_C_PROPERTIES (h5jam-shared SHARED)
   target_link_libraries (h5jam-shared PRIVATE ${HDF5_TOOLS_LIBSH_TARGET} ${HDF5_LIBSH_TARGET})
   set_target_properties (h5jam-shared PROPERTIES FOLDER tools)
   set_global_variable (HDF5_UTILS_TO_EXPORT "${HDF5_UTILS_TO_EXPORT};h5jam-shared")
 
   add_executable (h5unjam-shared ${HDF5_TOOLS_SRC_H5JAM_SOURCE_DIR}/h5unjam.c)
-  target_include_directories (h5unjam-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5unjam-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   TARGET_C_PROPERTIES (h5unjam-shared SHARED)
   target_link_libraries (h5unjam-shared PRIVATE ${HDF5_TOOLS_LIBSH_TARGET} ${HDF5_LIBSH_TARGET})
   set_target_properties (h5unjam-shared PROPERTIES FOLDER tools)
diff --git a/tools/src/h5ls/CMakeLists.txt b/tools/src/h5ls/CMakeLists.txt
index 5d19d15..055d545 100644
--- a/tools/src/h5ls/CMakeLists.txt
+++ b/tools/src/h5ls/CMakeLists.txt
@@ -6,7 +6,7 @@ project (HDF5_TOOLS_SRC_H5LS C)
 #-----------------------------------------------------------------------------
 if (BUILD_STATIC_LIBS)
   add_executable (h5ls ${HDF5_TOOLS_SRC_H5LS_SOURCE_DIR}/h5ls.c)
-  target_include_directories (h5ls PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5ls PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   target_compile_options(h5ls PRIVATE "${HDF5_CMAKE_C_FLAGS}")
   #target_compile_definitions(h5ls PRIVATE H5_TOOLS_DEBUG)
   TARGET_C_PROPERTIES (h5ls STATIC)
@@ -19,7 +19,7 @@ endif ()
 
 if (BUILD_SHARED_LIBS)
   add_executable (h5ls-shared ${HDF5_TOOLS_SRC_H5LS_SOURCE_DIR}/h5ls.c)
-  target_include_directories (h5ls-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5ls-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   target_compile_options(h5ls-shared PRIVATE "${HDF5_CMAKE_C_FLAGS}")
   #target_compile_definitions(h5ls-shared PRIVATE H5_TOOLS_DEBUG)
   TARGET_C_PROPERTIES (h5ls-shared SHARED)
diff --git a/tools/src/h5perf/CMakeLists.txt b/tools/src/h5perf/CMakeLists.txt
index a0dc729..78838d5 100644
--- a/tools/src/h5perf/CMakeLists.txt
+++ b/tools/src/h5perf/CMakeLists.txt
@@ -2,15 +2,14 @@ cmake_minimum_required (VERSION 3.12)
 project (HDF5_TOOLS_SRC_H5PERF C)
 
 # --------------------------------------------------------------------
-# Add the executables
+# h5perf_serial
 # --------------------------------------------------------------------
-#-- Adding test for h5perf_serial
 set (h5perf_serial_SOURCES
     ${HDF5_TOOLS_SRC_H5PERF_SOURCE_DIR}/sio_perf.c
     ${HDF5_TOOLS_SRC_H5PERF_SOURCE_DIR}/sio_engine.c
 )
 add_executable (h5perf_serial ${h5perf_serial_SOURCES})
-target_include_directories (h5perf_serial PRIVATE "${HDF5_TEST_SRC_DIR};${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+target_include_directories (h5perf_serial PRIVATE "${HDF5_TEST_SRC_DIR};${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
 if (BUILD_STATIC_LIBS)
   TARGET_C_PROPERTIES (h5perf_serial STATIC)
   target_link_libraries (h5perf_serial PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET})
@@ -23,13 +22,13 @@ set_global_variable (HDF5_UTILS_TO_EXPORT "${HDF5_UTILS_TO_EXPORT};h5perf_serial
 
 set (H5_DEP_EXECUTABLES h5perf_serial)
 
-#-----------------------------------------------------------------------------
-# Add Target to clang-format
-#-----------------------------------------------------------------------------
 if (HDF5_ENABLE_FORMATTERS)
   clang_format (HDF5_TOOLS_SRC_H5PERF_h5perf_serial_FORMAT h5perf_serial)
 endif ()
 
+# --------------------------------------------------------------------
+# h5perf
+# --------------------------------------------------------------------
 if (H5_HAVE_PARALLEL)
   if (UNIX)
     #-- Adding test for perf - only on unix systems
@@ -37,7 +36,7 @@ if (H5_HAVE_PARALLEL)
         ${HDF5_TOOLS_SRC_H5PERF_SOURCE_DIR}/perf.c
     )
     add_executable (perf ${perf_SOURCES})
-    target_include_directories (perf PRIVATE "${HDF5_TEST_SRC_DIR};${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+    target_include_directories (perf PRIVATE "${HDF5_TEST_SRC_DIR};${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
     if (BUILD_STATIC_LIBS)
       TARGET_C_PROPERTIES (perf STATIC)
       target_link_libraries (perf PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET} "$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_LIBRARIES}>")
@@ -64,7 +63,7 @@ if (H5_HAVE_PARALLEL)
       ${HDF5_TOOLS_SRC_H5PERF_SOURCE_DIR}/pio_engine.c
   )
   add_executable (h5perf ${h5perf_SOURCES})
-  target_include_directories (h5perf PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5perf PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   if (BUILD_STATIC_LIBS)
     TARGET_C_PROPERTIES (h5perf STATIC)
     target_link_libraries (h5perf PRIVATE ${LINK_LIBS} ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET}  "$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:MPI::MPI_C>")
@@ -77,9 +76,6 @@ if (H5_HAVE_PARALLEL)
 
   set (H5_DEP_EXECUTABLES h5perf)
 
-  #-----------------------------------------------------------------------------
-  # Add Target to clang-format
-  #-----------------------------------------------------------------------------
   if (HDF5_ENABLE_FORMATTERS)
     clang_format (HDF5_TOOLS_SRC_H5PERF_h5perf_FORMAT h5perf)
   endif ()
diff --git a/tools/src/h5repack/CMakeLists.txt b/tools/src/h5repack/CMakeLists.txt
index 0a4bddc..261c05a 100644
--- a/tools/src/h5repack/CMakeLists.txt
+++ b/tools/src/h5repack/CMakeLists.txt
@@ -17,7 +17,7 @@ set (REPACK_COMMON_SOURCES
 
 if (BUILD_STATIC_LIBS)
   add_executable (h5repack ${REPACK_COMMON_SOURCES} ${HDF5_TOOLS_SRC_H5REPACK_SOURCE_DIR}/h5repack_main.c)
-  target_include_directories (h5repack PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5repack PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   target_compile_options(h5repack PRIVATE "${HDF5_CMAKE_C_FLAGS}")
   TARGET_C_PROPERTIES (h5repack STATIC)
   target_link_libraries (h5repack PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET})
@@ -29,7 +29,7 @@ endif ()
 
 if (BUILD_SHARED_LIBS)
   add_executable (h5repack-shared ${REPACK_COMMON_SOURCES} ${HDF5_TOOLS_SRC_H5REPACK_SOURCE_DIR}/h5repack_main.c)
-  target_include_directories (h5repack-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5repack-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   target_compile_options(h5repack-shared PRIVATE "${HDF5_CMAKE_C_FLAGS}")
   TARGET_C_PROPERTIES (h5repack-shared SHARED)
   target_link_libraries (h5repack-shared PRIVATE ${HDF5_TOOLS_LIBSH_TARGET} ${HDF5_LIBSH_TARGET})
diff --git a/tools/src/h5stat/CMakeLists.txt b/tools/src/h5stat/CMakeLists.txt
index 5ee091c..661b7f8 100644
--- a/tools/src/h5stat/CMakeLists.txt
+++ b/tools/src/h5stat/CMakeLists.txt
@@ -6,7 +6,7 @@ project (HDF5_TOOLS_SRC_H5STAT C)
 # --------------------------------------------------------------------
 if (BUILD_STATIC_LIBS)
   add_executable (h5stat ${HDF5_TOOLS_SRC_H5STAT_SOURCE_DIR}/h5stat.c)
-  target_include_directories (h5stat PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5stat PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   target_compile_options(h5stat PRIVATE "${HDF5_CMAKE_C_FLAGS}")
   TARGET_C_PROPERTIES (h5stat STATIC)
   target_link_libraries (h5stat PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET})
@@ -18,7 +18,7 @@ endif ()
 
 if (BUILD_SHARED_LIBS)
   add_executable (h5stat-shared ${HDF5_TOOLS_SRC_H5STAT_SOURCE_DIR}/h5stat.c)
-  target_include_directories (h5stat-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5stat-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   target_compile_options(h5stat-shared PRIVATE "${HDF5_CMAKE_C_FLAGS}")
   TARGET_C_PROPERTIES (h5stat-shared SHARED)
   target_link_libraries (h5stat-shared PRIVATE ${HDF5_TOOLS_LIBSH_TARGET} ${HDF5_LIBSH_TARGET})
diff --git a/tools/src/misc/CMakeLists.txt b/tools/src/misc/CMakeLists.txt
index 751fe09..b9e7f28 100644
--- a/tools/src/misc/CMakeLists.txt
+++ b/tools/src/misc/CMakeLists.txt
@@ -7,7 +7,7 @@ project (HDF5_TOOLS_SRC_MISC C)
 #-- Misc Executables
 if (BUILD_STATIC_LIBS)
   add_executable (h5debug ${HDF5_TOOLS_SRC_MISC_SOURCE_DIR}/h5debug.c)
-  target_include_directories (h5debug PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5debug PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   target_compile_options(h5debug PRIVATE "${HDF5_CMAKE_C_FLAGS}")
   TARGET_C_PROPERTIES (h5debug STATIC)
   target_link_libraries (h5debug PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET})
@@ -15,7 +15,7 @@ if (BUILD_STATIC_LIBS)
   set_global_variable (HDF5_UTILS_TO_EXPORT "${HDF5_UTILS_TO_EXPORT};h5debug")
 
   add_executable (h5repart ${HDF5_TOOLS_SRC_MISC_SOURCE_DIR}/h5repart.c)
-  target_include_directories (h5repart PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5repart PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   target_compile_options(h5repart PRIVATE "${HDF5_CMAKE_C_FLAGS}")
   TARGET_C_PROPERTIES (h5repart STATIC)
   target_link_libraries (h5repart PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET})
@@ -23,7 +23,7 @@ if (BUILD_STATIC_LIBS)
   set_global_variable (HDF5_UTILS_TO_EXPORT "${HDF5_UTILS_TO_EXPORT};h5repart")
 
   add_executable (h5mkgrp ${HDF5_TOOLS_SRC_MISC_SOURCE_DIR}/h5mkgrp.c)
-  target_include_directories (h5mkgrp PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5mkgrp PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   target_compile_options(h5mkgrp PRIVATE "${HDF5_CMAKE_C_FLAGS}")
   TARGET_C_PROPERTIES (h5mkgrp STATIC)
   target_link_libraries (h5mkgrp PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET})
@@ -31,7 +31,7 @@ if (BUILD_STATIC_LIBS)
   set_global_variable (HDF5_UTILS_TO_EXPORT "${HDF5_UTILS_TO_EXPORT};h5mkgrp")
 
   add_executable (h5clear ${HDF5_TOOLS_SRC_MISC_SOURCE_DIR}/h5clear.c)
-  target_include_directories (h5clear PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5clear PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   target_compile_options(h5clear PRIVATE "${HDF5_CMAKE_C_FLAGS}")
   TARGET_C_PROPERTIES (h5clear STATIC)
   target_link_libraries (h5clear PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET})
@@ -47,7 +47,7 @@ if (BUILD_STATIC_LIBS)
 endif ()
 if (BUILD_SHARED_LIBS)
   add_executable (h5debug-shared ${HDF5_TOOLS_SRC_MISC_SOURCE_DIR}/h5debug.c)
-  target_include_directories (h5debug-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5debug-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   TARGET_C_PROPERTIES (h5debug-shared SHARED)
   target_compile_options(h5debug-shared PRIVATE "${HDF5_CMAKE_C_FLAGS}")
   target_link_libraries (h5debug-shared PRIVATE ${HDF5_TOOLS_LIBSH_TARGET} ${HDF5_LIBSH_TARGET})
@@ -55,7 +55,7 @@ if (BUILD_SHARED_LIBS)
   set_global_variable (HDF5_UTILS_TO_EXPORT "${HDF5_UTILS_TO_EXPORT};h5debug-shared")
 
   add_executable (h5repart-shared ${HDF5_TOOLS_SRC_MISC_SOURCE_DIR}/h5repart.c)
-  target_include_directories (h5repart-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5repart-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   target_compile_options(h5repart-shared PRIVATE "${HDF5_CMAKE_C_FLAGS}")
   TARGET_C_PROPERTIES (h5repart-shared SHARED)
   target_link_libraries (h5repart-shared PRIVATE ${HDF5_TOOLS_LIBSH_TARGET} ${HDF5_LIBSH_TARGET})
@@ -63,7 +63,7 @@ if (BUILD_SHARED_LIBS)
   set_global_variable (HDF5_UTILS_TO_EXPORT "${HDF5_UTILS_TO_EXPORT};h5repart-shared")
 
   add_executable (h5mkgrp-shared ${HDF5_TOOLS_SRC_MISC_SOURCE_DIR}/h5mkgrp.c)
-  target_include_directories (h5mkgrp-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5mkgrp-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   target_compile_options(h5mkgrp-shared PRIVATE "${HDF5_CMAKE_C_FLAGS}")
   TARGET_C_PROPERTIES (h5mkgrp-shared SHARED)
   target_link_libraries (h5mkgrp-shared PRIVATE ${HDF5_TOOLS_LIBSH_TARGET} ${HDF5_LIBSH_TARGET})
@@ -71,7 +71,7 @@ if (BUILD_SHARED_LIBS)
   set_global_variable (HDF5_UTILS_TO_EXPORT "${HDF5_UTILS_TO_EXPORT};h5mkgrp-shared")
 
   add_executable (h5clear-shared ${HDF5_TOOLS_SRC_MISC_SOURCE_DIR}/h5clear.c)
-  target_include_directories (h5clear-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5clear-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   target_compile_options(h5clear-shared PRIVATE "${HDF5_CMAKE_C_FLAGS}")
   TARGET_C_PROPERTIES (h5clear-shared SHARED)
   target_link_libraries (h5clear-shared PRIVATE ${HDF5_TOOLS_LIBSH_TARGET} ${HDF5_LIBSH_TARGET})
diff --git a/tools/test/h5copy/CMakeLists.txt b/tools/test/h5copy/CMakeLists.txt
index fb88473..c2b375e 100644
--- a/tools/test/h5copy/CMakeLists.txt
+++ b/tools/test/h5copy/CMakeLists.txt
@@ -6,7 +6,7 @@ project (HDF5_TOOLS_TEST_H5COPY C)
 # --------------------------------------------------------------------
 if (HDF5_BUILD_GENERATORS AND BUILD_STATIC_LIBS)
   add_executable (h5copygentest ${HDF5_TOOLS_TEST_H5COPY_SOURCE_DIR}/h5copygentest.c)
-  target_include_directories (h5copygentest PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5copygentest PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   TARGET_C_PROPERTIES (h5copygentest STATIC)
   target_link_libraries (h5copygentest PRIVATE ${HDF5_LIB_TARGET})
   set_target_properties (h5copygentest PROPERTIES FOLDER generator/tools)
@@ -30,7 +30,7 @@ if (BUILD_SHARED_LIBS)
   set (H5COPY_TOOL_PLUGIN_LIB_TARGET           ${H5COPY_TOOL_PLUGIN_LIB_CORENAME})
 
   add_library (${H5COPY_TOOL_PLUGIN_LIB_TARGET} SHARED dynlib_copy.c)
-  target_include_directories (${H5COPY_TOOL_PLUGIN_LIB_TARGET} PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (${H5COPY_TOOL_PLUGIN_LIB_TARGET} PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   TARGET_C_PROPERTIES (${H5COPY_TOOL_PLUGIN_LIB_TARGET} SHARED)
   target_link_libraries (${H5COPY_TOOL_PLUGIN_LIB_TARGET} PRIVATE ${HDF5_LIBSH_TARGET})
   H5_SET_LIB_OPTIONS (${H5COPY_TOOL_PLUGIN_LIB_TARGET} ${H5COPY_TOOL_PLUGIN_LIB_NAME} SHARED "LIB")
diff --git a/tools/test/h5diff/CMakeLists.txt b/tools/test/h5diff/CMakeLists.txt
index e516806..dbddad6 100644
--- a/tools/test/h5diff/CMakeLists.txt
+++ b/tools/test/h5diff/CMakeLists.txt
@@ -6,7 +6,7 @@ project (HDF5_TOOLS_TEST_H5DIFF C)
 # --------------------------------------------------------------------
 if (HDF5_BUILD_GENERATORS AND BUILD_STATIC_LIBS)
   add_executable (h5diffgentest ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/h5diffgentest.c)
-  target_include_directories (h5diffgentest PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5diffgentest PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   TARGET_C_PROPERTIES (h5diffgentest STATIC)
   target_link_libraries (h5diffgentest PRIVATE ${HDF5_LIB_TARGET})
   set_target_properties (h5diffgentest PROPERTIES FOLDER generator/tools)
@@ -30,7 +30,7 @@ if (BUILD_SHARED_LIBS)
   set (H5DIFF_TOOL_PLUGIN_LIB_TARGET           ${H5DIFF_TOOL_PLUGIN_LIB_CORENAME})
 
   add_library (${H5DIFF_TOOL_PLUGIN_LIB_TARGET} SHARED dynlib_diff.c)
-  target_include_directories (${H5DIFF_TOOL_PLUGIN_LIB_TARGET} PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (${H5DIFF_TOOL_PLUGIN_LIB_TARGET} PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   TARGET_C_PROPERTIES (${H5DIFF_TOOL_PLUGIN_LIB_TARGET} SHARED)
   target_link_libraries (${H5DIFF_TOOL_PLUGIN_LIB_TARGET} PRIVATE ${HDF5_LIBSH_TARGET})
   H5_SET_LIB_OPTIONS (${H5DIFF_TOOL_PLUGIN_LIB_TARGET} ${H5DIFF_TOOL_PLUGIN_LIB_NAME} SHARED "LIB")
diff --git a/tools/test/h5dump/CMakeLists.txt b/tools/test/h5dump/CMakeLists.txt
index 19f3ca8..6a5e57b 100644
--- a/tools/test/h5dump/CMakeLists.txt
+++ b/tools/test/h5dump/CMakeLists.txt
@@ -10,7 +10,7 @@ if (BUILD_SHARED_LIBS)
   set (H5DUMP_TOOL_PLUGIN_LIB_TARGET           ${H5DUMP_TOOL_PLUGIN_LIB_CORENAME})
 
   add_library (${H5DUMP_TOOL_PLUGIN_LIB_TARGET} SHARED dynlib_dump.c)
-  target_include_directories (${H5DUMP_TOOL_PLUGIN_LIB_TARGET} PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (${H5DUMP_TOOL_PLUGIN_LIB_TARGET} PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   TARGET_C_PROPERTIES (${H5DUMP_TOOL_PLUGIN_LIB_TARGET} SHARED)
   target_link_libraries (${H5DUMP_TOOL_PLUGIN_LIB_TARGET} PRIVATE ${HDF5_LIBSH_TARGET})
   H5_SET_LIB_OPTIONS (${H5DUMP_TOOL_PLUGIN_LIB_TARGET} ${H5DUMP_TOOL_PLUGIN_LIB_NAME} SHARED "LIB")
@@ -42,7 +42,7 @@ endif ()
 # --------------------------------------------------------------------
 if (HDF5_BUILD_GENERATORS AND BUILD_STATIC_LIBS)
   add_executable (h5dumpgentest ${HDF5_TOOLS_TEST_H5DUMP_SOURCE_DIR}/h5dumpgentest.c)
-  target_include_directories (h5dumpgentest PRIVATE "${HDF5_SRC_DIR};${HDF5_TEST_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5dumpgentest PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_TEST_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   TARGET_C_PROPERTIES (h5dumpgentest STATIC)
   target_link_libraries (h5dumpgentest PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET})
   set_target_properties (h5dumpgentest PROPERTIES FOLDER generator/tools)
diff --git a/tools/test/h5format_convert/CMakeLists.txt b/tools/test/h5format_convert/CMakeLists.txt
index a77335a..4d61bf7 100644
--- a/tools/test/h5format_convert/CMakeLists.txt
+++ b/tools/test/h5format_convert/CMakeLists.txt
@@ -5,7 +5,7 @@ project (HDF5_TOOLS_TEST_H5FC C)
 # Add the h5format_convert test executables
 # --------------------------------------------------------------------
 add_executable (h5fc_chk_idx ${HDF5_TOOLS_TEST_H5FC_SOURCE_DIR}/h5fc_chk_idx.c)
-target_include_directories (h5fc_chk_idx PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+target_include_directories (h5fc_chk_idx PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
 if (BUILD_STATIC_LIBS)
   TARGET_C_PROPERTIES (h5fc_chk_idx STATIC)
   target_link_libraries (h5fc_chk_idx PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET})
@@ -24,7 +24,7 @@ endif ()
 
 if (HDF5_BUILD_GENERATORS AND BUILD_STATIC_LIBS)
   add_executable (h5fc_gentest ${HDF5_TOOLS_TEST_H5FC_SOURCE_DIR}/h5fc_gentest.c)
-  target_include_directories (h5fc_gentest PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5fc_gentest PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   TARGET_C_PROPERTIES (h5fc_gentest STATIC)
   target_link_libraries (h5fc_gentest PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET})
   set_target_properties (h5fc_gentest PROPERTIES FOLDER generator/tools)
diff --git a/tools/test/h5import/CMakeLists.txt b/tools/test/h5import/CMakeLists.txt
index 567d9f6..710ba47 100644
--- a/tools/test/h5import/CMakeLists.txt
+++ b/tools/test/h5import/CMakeLists.txt
@@ -5,7 +5,7 @@ project (HDF5_TOOLS_TEST_H5IMPORT C)
 # Add the h5import executables
 # --------------------------------------------------------------------
 add_executable (h5importtest ${HDF5_TOOLS_TEST_H5IMPORT_SOURCE_DIR}/h5importtest.c)
-target_include_directories (h5importtest PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+target_include_directories (h5importtest PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
 if (BUILD_STATIC_LIBS)
   TARGET_C_PROPERTIES (h5importtest STATIC)
   target_link_libraries (h5importtest PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET})
diff --git a/tools/test/h5jam/CMakeLists.txt b/tools/test/h5jam/CMakeLists.txt
index 97e6b76..a7feb20 100644
--- a/tools/test/h5jam/CMakeLists.txt
+++ b/tools/test/h5jam/CMakeLists.txt
@@ -6,7 +6,7 @@ project (HDF5_TOOLS_TEST_H5JAM C)
 # --------------------------------------------------------------------
 if (HDF5_BUILD_GENERATORS AND BUILD_STATIC_LIBS)
   add_executable (h5jamgentest ${HDF5_TOOLS_TEST_H5JAM_SOURCE_DIR}/h5jamgentest.c)
-  target_include_directories (h5jamgentest PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5jamgentest PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   TARGET_C_PROPERTIES (h5jamgentest STATIC)
   target_link_libraries (h5jamgentest PRIVATE ${HDF5_LIB_TARGET})
   set_target_properties (h5jamgentest PROPERTIES FOLDER generator/tools)
@@ -22,7 +22,7 @@ if (HDF5_BUILD_GENERATORS AND BUILD_STATIC_LIBS)
 endif ()
 
 add_executable (getub ${HDF5_TOOLS_TEST_H5JAM_SOURCE_DIR}/getub.c)
-target_include_directories (getub PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+target_include_directories (getub PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
 if (BUILD_STATIC_LIBS)
   TARGET_C_PROPERTIES (getub STATIC)
   target_link_libraries (getub PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET})
@@ -33,7 +33,7 @@ endif ()
 set_target_properties (getub PROPERTIES FOLDER tools)
 
 add_executable (tellub ${HDF5_TOOLS_TEST_H5JAM_SOURCE_DIR}/tellub.c)
-target_include_directories (tellub PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+target_include_directories (tellub PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
 if (BUILD_STATIC_LIBS)
   TARGET_C_PROPERTIES (tellub STATIC)
   target_link_libraries (tellub PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET})
diff --git a/tools/test/h5ls/CMakeLists.txt b/tools/test/h5ls/CMakeLists.txt
index ba6e468..b6c1057 100644
--- a/tools/test/h5ls/CMakeLists.txt
+++ b/tools/test/h5ls/CMakeLists.txt
@@ -10,7 +10,7 @@ if (BUILD_SHARED_LIBS)
   set (H5LS_TOOL_PLUGIN_LIB_TARGET           ${H5LS_TOOL_PLUGIN_LIB_CORENAME})
 
   add_library (${H5LS_TOOL_PLUGIN_LIB_TARGET} SHARED dynlib_ls.c)
-  target_include_directories (${H5LS_TOOL_PLUGIN_LIB_TARGET} PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (${H5LS_TOOL_PLUGIN_LIB_TARGET} PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   TARGET_C_PROPERTIES (${H5LS_TOOL_PLUGIN_LIB_TARGET} SHARED)
   target_link_libraries (${H5LS_TOOL_PLUGIN_LIB_TARGET} PRIVATE ${HDF5_LIBSH_TARGET})
   H5_SET_LIB_OPTIONS (${H5LS_TOOL_PLUGIN_LIB_TARGET} ${H5LS_TOOL_PLUGIN_LIB_NAME} SHARED "LIB")
diff --git a/tools/test/h5repack/CMakeLists.txt b/tools/test/h5repack/CMakeLists.txt
index 2f79763..2fd2827 100644
--- a/tools/test/h5repack/CMakeLists.txt
+++ b/tools/test/h5repack/CMakeLists.txt
@@ -6,7 +6,7 @@ project (HDF5_TOOLS_TEST_H5REPACK C)
 # --------------------------------------------------------------------
 add_executable (testh5repack_detect_szip ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testh5repack_detect_szip.c)
 target_include_directories (testh5repack_detect_szip
-    PRIVATE "${HDF5_TOOLS_SRC_H5REPACK_SOURCE_DIR};${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>"
+    PRIVATE "${HDF5_TOOLS_SRC_H5REPACK_SOURCE_DIR};${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>"
 )
 if (BUILD_STATIC_LIBS)
   TARGET_C_PROPERTIES (testh5repack_detect_szip STATIC)
@@ -29,7 +29,7 @@ set (REPACK_COMMON_SOURCES
 )
 add_executable (h5repacktest ${REPACK_COMMON_SOURCES} ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/h5repacktst.c)
 target_include_directories (h5repacktest
-    PRIVATE "${HDF5_TOOLS_SRC_H5REPACK_SOURCE_DIR};${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_TEST_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>"
+    PRIVATE "${HDF5_TOOLS_SRC_H5REPACK_SOURCE_DIR};${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_TEST_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>"
 )
 if (BUILD_STATIC_LIBS)
   TARGET_C_PROPERTIES (h5repacktest STATIC)
@@ -52,13 +52,13 @@ if (BUILD_SHARED_LIBS)
   set (H5REPACK_TOOL_PLUGIN_LIB_VTARGET          ${H5REPACK_TOOL_PLUGIN_LIB_VCORENAME})
 
   add_library (${H5REPACK_TOOL_PLUGIN_LIB_TARGET} SHARED dynlib_rpk.c)
-  target_include_directories (${H5REPACK_TOOL_PLUGIN_LIB_TARGET} PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (${H5REPACK_TOOL_PLUGIN_LIB_TARGET} PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   TARGET_C_PROPERTIES (${H5REPACK_TOOL_PLUGIN_LIB_TARGET} SHARED)
   target_link_libraries (${H5REPACK_TOOL_PLUGIN_LIB_TARGET} PRIVATE ${HDF5_LIBSH_TARGET})
   H5_SET_LIB_OPTIONS (${H5REPACK_TOOL_PLUGIN_LIB_TARGET} ${H5REPACK_TOOL_PLUGIN_LIB_NAME} SHARED "LIB")
 
   add_library (${H5REPACK_TOOL_PLUGIN_LIB_VTARGET} SHARED dynlib_vrpk.c)
-  target_include_directories (${H5REPACK_TOOL_PLUGIN_LIB_VTARGET} PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (${H5REPACK_TOOL_PLUGIN_LIB_VTARGET} PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   TARGET_C_PROPERTIES (${H5REPACK_TOOL_PLUGIN_LIB_VTARGET} SHARED)
   target_link_libraries (${H5REPACK_TOOL_PLUGIN_LIB_VTARGET} PRIVATE ${HDF5_LIBSH_TARGET})
   H5_SET_LIB_OPTIONS (${H5REPACK_TOOL_PLUGIN_LIB_VTARGET} ${H5REPACK_TOOL_PLUGIN_LIB_VNAME} SHARED "LIB")
@@ -99,7 +99,7 @@ endif ()
 # --------------------------------------------------------------------
 if (HDF5_BUILD_GENERATORS AND BUILD_STATIC_LIBS)
   add_executable (h5repackgentest ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/h5repackgentest.c)
-  target_include_directories (h5repackgentest PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5repackgentest PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   TARGET_C_PROPERTIES (h5repackgentest STATIC)
   target_link_libraries (h5repackgentest PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET})
   set_target_properties (h5repackgentest PROPERTIES FOLDER generator/tools)
diff --git a/tools/test/h5stat/CMakeLists.txt b/tools/test/h5stat/CMakeLists.txt
index a79f61c..19dbe78 100644
--- a/tools/test/h5stat/CMakeLists.txt
+++ b/tools/test/h5stat/CMakeLists.txt
@@ -6,7 +6,7 @@ project (HDF5_TOOLS_TEST_H5STAT C)
 # --------------------------------------------------------------------
 if (HDF5_BUILD_GENERATORS AND BUILD_STATIC_LIBS)
   add_executable (h5stat_gentest ${HDF5_TOOLS_TEST_H5STAT_SOURCE_DIR}/h5stat_gentest.c)
-  target_include_directories (h5stat_gentest PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5stat_gentest PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   TARGET_C_PROPERTIES (h5stat_gentest STATIC)
   target_link_libraries (h5stat_gentest PRIVATE ${HDF5_LIB_TARGET})
   set_target_properties (h5stat_gentest PROPERTIES FOLDER generator/tools)
diff --git a/tools/test/misc/CMakeLists.txt b/tools/test/misc/CMakeLists.txt
index fe66e94..df8b43e 100644
--- a/tools/test/misc/CMakeLists.txt
+++ b/tools/test/misc/CMakeLists.txt
@@ -6,7 +6,7 @@ project (HDF5_TOOLS_TEST_MISC C)
 # --------------------------------------------------------------------
 if (HDF5_BUILD_GENERATORS AND BUILD_STATIC_LIBS)
   add_executable (h5repart_gentest ${HDF5_TOOLS_TEST_MISC_SOURCE_DIR}/h5repart_gentest.c)
-  target_include_directories (h5repart_gentest PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5repart_gentest PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   TARGET_C_PROPERTIES (h5repart_gentest STATIC)
   target_link_libraries (h5repart_gentest PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_TEST_LIB_TARGET})
   set_target_properties (h5repart_gentest PROPERTIES FOLDER generator/tools)
@@ -20,7 +20,7 @@ if (HDF5_BUILD_GENERATORS AND BUILD_STATIC_LIBS)
   endif ()
 
   add_executable (h5clear_gentest ${HDF5_TOOLS_TEST_MISC_SOURCE_DIR}/h5clear_gentest.c)
-  target_include_directories (h5clear_gentest PRIVATE "${HDF5_SRC_DIR};${HDF5_TEST_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5clear_gentest PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_TEST_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   TARGET_C_PROPERTIES (h5clear_gentest STATIC)
   target_link_libraries (h5clear_gentest PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_TEST_LIB_TARGET})
   set_target_properties (h5clear_gentest PROPERTIES FOLDER tools)
@@ -38,7 +38,7 @@ if (HDF5_BUILD_GENERATORS AND BUILD_STATIC_LIBS)
 endif ()
 
 add_executable (h5repart_test ${HDF5_TOOLS_TEST_MISC_SOURCE_DIR}/repart_test.c)
-target_include_directories (h5repart_test PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+target_include_directories (h5repart_test PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
 if (BUILD_STATIC_LIBS)
   TARGET_C_PROPERTIES (h5repart_test STATIC)
   target_link_libraries (h5repart_test PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET})
@@ -56,7 +56,7 @@ if (HDF5_ENABLE_FORMATTERS)
 endif ()
 
 add_executable (clear_open_chk ${HDF5_TOOLS_TEST_MISC_SOURCE_DIR}/clear_open_chk.c)
-target_include_directories (clear_open_chk PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+target_include_directories (clear_open_chk PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
 if (BUILD_STATIC_LIBS)
   TARGET_C_PROPERTIES (clear_open_chk STATIC)
   target_link_libraries (clear_open_chk PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET})
diff --git a/tools/test/misc/vds/CMakeLists.txt b/tools/test/misc/vds/CMakeLists.txt
index 24f279b..f633a11 100644
--- a/tools/test/misc/vds/CMakeLists.txt
+++ b/tools/test/misc/vds/CMakeLists.txt
@@ -3,7 +3,7 @@ project (HDF5_TOOLS_TEST_MISC_VDS C)
 
 macro (ADD_H5_GENERATOR genfile)
   add_executable (${genfile} ${HDF5_TOOLS_TEST_MISC_VDS_SOURCE_DIR}/${genfile}.c)
-  target_include_directories (${genfile} PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (${genfile} PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   if (BUILD_STATIC_LIBS)
     TARGET_C_PROPERTIES (${genfile} STATIC)
     target_link_libraries (${genfile} PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET})
diff --git a/tools/test/perform/CMakeLists.txt b/tools/test/perform/CMakeLists.txt
index 7bf79c5..eed545b 100644
--- a/tools/test/perform/CMakeLists.txt
+++ b/tools/test/perform/CMakeLists.txt
@@ -38,7 +38,7 @@ set (chunk_SOURCES
     ${HDF5_TOOLS_TEST_PERFORM_SOURCE_DIR}/chunk.c
 )
 add_executable(chunk ${chunk_SOURCES})
-target_include_directories (chunk PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+target_include_directories (chunk PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
 if (NOT BUILD_SHARED_LIBS)
   TARGET_C_PROPERTIES (chunk STATIC)
   target_link_libraries (chunk PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET})
@@ -48,19 +48,18 @@ else ()
 endif ()
 set_target_properties (chunk PROPERTIES FOLDER perform)
 
-#-----------------------------------------------------------------------------
-# Add Target to clang-format
-#-----------------------------------------------------------------------------
 if (HDF5_ENABLE_FORMATTERS)
   clang_format (HDF5_TOOLS_TEST_PERFORM_chunk_FORMAT chunk)
 endif ()
 
-#-- Adding test for iopipe
+#-----------------------------------------------------------------------------
+# iopipe
+#-----------------------------------------------------------------------------
 set (iopipe_SOURCES
     ${HDF5_TOOLS_TEST_PERFORM_SOURCE_DIR}/iopipe.c
 )
 add_executable (iopipe ${iopipe_SOURCES})
-target_include_directories (iopipe PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+target_include_directories (iopipe PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
 if (NOT BUILD_SHARED_LIBS)
   TARGET_C_PROPERTIES (iopipe STATIC)
   target_link_libraries (iopipe PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET})
@@ -70,19 +69,18 @@ else ()
 endif ()
 set_target_properties (iopipe PROPERTIES FOLDER perform)
 
-#-----------------------------------------------------------------------------
-# Add Target to clang-format
-#-----------------------------------------------------------------------------
 if (HDF5_ENABLE_FORMATTERS)
   clang_format (HDF5_TOOLS_TEST_PERFORM_iopipe_FORMAT iopipe)
 endif ()
 
-#-- Adding test for chunk_cache
+#-----------------------------------------------------------------------------
+# chunk_cache
+#-----------------------------------------------------------------------------
 set (chunk_cache_SOURCES
     ${HDF5_TOOLS_TEST_PERFORM_SOURCE_DIR}/chunk_cache.c
 )
 add_executable (chunk_cache ${chunk_cache_SOURCES})
-target_include_directories (chunk_cache PRIVATE "${HDF5_TEST_SRC_DIR};${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+target_include_directories (chunk_cache PRIVATE "${HDF5_TEST_SRC_DIR};${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
 if (NOT BUILD_SHARED_LIBS)
   TARGET_C_PROPERTIES (chunk_cache STATIC)
   target_link_libraries (chunk_cache PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET})
@@ -92,19 +90,18 @@ else ()
 endif ()
 set_target_properties (chunk_cache PROPERTIES FOLDER perform)
 
-#-----------------------------------------------------------------------------
-# Add Target to clang-format
-#-----------------------------------------------------------------------------
 if (HDF5_ENABLE_FORMATTERS)
   clang_format (HDF5_TOOLS_TEST_PERFORM_chunk_cache_FORMAT chunk_cache)
 endif ()
 
-#-- Adding test for overhead
+#-----------------------------------------------------------------------------
+# overhead
+#-----------------------------------------------------------------------------
 set (overhead_SOURCES
     ${HDF5_TOOLS_TEST_PERFORM_SOURCE_DIR}/overhead.c
 )
 add_executable (overhead ${overhead_SOURCES})
-target_include_directories (overhead PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+target_include_directories (overhead PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
 if (NOT BUILD_SHARED_LIBS)
   TARGET_C_PROPERTIES (overhead STATIC)
   target_link_libraries (overhead PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET})
@@ -114,19 +111,18 @@ else ()
 endif ()
 set_target_properties (overhead PROPERTIES FOLDER perform)
 
-#-----------------------------------------------------------------------------
-# Add Target to clang-format
-#-----------------------------------------------------------------------------
 if (HDF5_ENABLE_FORMATTERS)
   clang_format (HDF5_TOOLS_TEST_PERFORM_overhead_FORMAT overhead)
 endif ()
 
-#-- Adding test for perf_meta
+#-----------------------------------------------------------------------------
+# perf_meta
+#-----------------------------------------------------------------------------
 set (perf_meta_SOURCES
     ${HDF5_TOOLS_TEST_PERFORM_SOURCE_DIR}/perf_meta.c
 )
 add_executable (perf_meta ${perf_meta_SOURCES})
-target_include_directories (perf_meta PRIVATE "${HDF5_TEST_SRC_DIR};${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+target_include_directories (perf_meta PRIVATE "${HDF5_TEST_SRC_DIR};${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
 if (NOT BUILD_SHARED_LIBS)
   TARGET_C_PROPERTIES (perf_meta STATIC)
   target_link_libraries (perf_meta PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_TEST_LIB_TARGET} ${HDF5_LIB_TARGET})
@@ -136,19 +132,18 @@ else ()
 endif ()
 set_target_properties (perf_meta PROPERTIES FOLDER perform)
 
-#-----------------------------------------------------------------------------
-# Add Target to clang-format
-#-----------------------------------------------------------------------------
 if (HDF5_ENABLE_FORMATTERS)
   clang_format (HDF5_TOOLS_TEST_PERFORM_perf_meta_FORMAT perf_meta)
 endif ()
 
-#-- Adding test for zip_perf
+#-----------------------------------------------------------------------------
+# zip_perf
+#-----------------------------------------------------------------------------
 set (zip_perf_SOURCES
     ${HDF5_TOOLS_TEST_PERFORM_SOURCE_DIR}/zip_perf.c
 )
 add_executable (zip_perf ${zip_perf_SOURCES})
-target_include_directories (zip_perf PRIVATE "${HDF5_TEST_SRC_DIR};${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+target_include_directories (zip_perf PRIVATE "${HDF5_TEST_SRC_DIR};${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
 if (NOT BUILD_SHARED_LIBS)
   TARGET_C_PROPERTIES (zip_perf STATIC)
   target_link_libraries (zip_perf PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET} ${LINK_COMP_LIBS})
@@ -158,9 +153,6 @@ else ()
 endif ()
 set_target_properties (zip_perf PROPERTIES FOLDER perform)
 
-#-----------------------------------------------------------------------------
-# Add Target to clang-format
-#-----------------------------------------------------------------------------
 if (HDF5_ENABLE_FORMATTERS)
   clang_format (HDF5_TOOLS_TEST_PERFORM_zip_perf_FORMAT zip_perf)
 endif ()
diff --git a/utils/mirror_vfd/CMakeLists.txt b/utils/mirror_vfd/CMakeLists.txt
index 92212e0..ef62417 100644
--- a/utils/mirror_vfd/CMakeLists.txt
+++ b/utils/mirror_vfd/CMakeLists.txt
@@ -12,7 +12,7 @@ set (mirror_server_SOURCES
         ${HDF5_UTILS_MIRRORVFD_SOURCE_DIR}/mirror_remote.h
 )
 add_executable (mirror_server ${mirror_server_SOURCES})
-target_include_directories (mirror_server PRIVATE "${HDF5_UITLS_DIR};${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+target_include_directories (mirror_server PRIVATE "${HDF5_UTILS_DIR};${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
 if (NOT BUILD_SHARED_LIBS)
   TARGET_C_PROPERTIES (mirror_server STATIC)
   target_link_libraries (mirror_server PRIVATE ${HDF5_LIB_TARGET})
@@ -37,7 +37,7 @@ endif ()
 
 set (mirror_server_stop_SOURCES ${HDF5_UTILS_MIRRORVFD_SOURCE_DIR}/mirror_server_stop.c)
 add_executable (mirror_server_stop ${mirror_server_stop_SOURCES})
-target_include_directories (mirror_server_stop PRIVATE "${HDF5_UITLS_DIR};${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+target_include_directories (mirror_server_stop PRIVATE "${HDF5_UTILS_DIR};${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
 if (NOT BUILD_SHARED_LIBS)
   TARGET_C_PROPERTIES (mirror_server_stop STATIC)
   target_link_libraries (mirror_server_stop PRIVATE ${HDF5_LIB_TARGET})
diff --git a/utils/test/CMakeLists.txt b/utils/test/CMakeLists.txt
index 921fbd0..baf2ca5 100644
--- a/utils/test/CMakeLists.txt
+++ b/utils/test/CMakeLists.txt
@@ -7,7 +7,7 @@ project (HDF5_TEST C)
 
 macro (ADD_H5_EXE file)
   add_executable (${file} ${HDF5_TEST_SOURCE_DIR}/${file}.c)
-  target_include_directories (${file} PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};${HDF5_TEST_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (${file} PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};${HDF5_TEST_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   target_compile_options(${file} PRIVATE "${HDF5_CMAKE_C_FLAGS}")
   if (NOT BUILD_SHARED_LIBS)
     TARGET_C_PROPERTIES (${file} STATIC)
author	Allen Byrne <50328838+byrnHDF@users.noreply.github.com>	2023-03-20 18:00:00 (GMT)
committer	GitHub <noreply@github.com>	2023-03-20 18:00:00 (GMT)
commit	1ffaa38174b0f784b7ed6a471f40bf0e749ceac3 (patch)
tree	7862edd79409afc7806996f166aa6bb7cd2088e9
parent	c01e27cd8ea443a6ddf68ca1052a491692e28ae9 (diff)
download	hdf5-1ffaa38174b0f784b7ed6a471f40bf0e749ceac3.zip hdf5-1ffaa38174b0f784b7ed6a471f40bf0e749ceac3.tar.gz hdf5-1ffaa38174b0f784b7ed6a471f40bf0e749ceac3.tar.bz2