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authorAllen Byrne <50328838+byrnHDF@users.noreply.github.com>2024-01-31 14:13:15 (GMT)
committerGitHub <noreply@github.com>2024-01-31 14:13:15 (GMT)
commit595b5099ea7042cda52d22dda3dd6b4da4b683e6 (patch)
treee2d3a603b19f72a230534bf137dc40ca3ff25e78
parent45ac12e6b660edfb312110d4e3b4c6970ff0585a (diff)
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Add binary testing to CI testing (#3971)
* Add binary test job * Correct names of jobs * Add build mode to binary names * Limit packaging execution * Make mac DragNDrop optional * Format if checks * fix checks for TS * Allow examples to be packaged * Correct if NOT format * Correct configure and workflow call * Separate out CMake/Autotools Parallel job * Correct binary examples path * Correct dir path for windows test * Correct paths and add extlibs * Windows binaries do not have a share folder
-rw-r--r--.github/workflows/autotools.yml12
-rw-r--r--.github/workflows/cmake-bintest.yml218
-rw-r--r--.github/workflows/cmake-ctest.yml2
-rw-r--r--.github/workflows/cmake.yml27
-rw-r--r--.github/workflows/main-auto-par-spc.yml137
-rw-r--r--.github/workflows/main-auto-par.yml104
-rw-r--r--.github/workflows/main-auto.yml60
-rw-r--r--.github/workflows/main-cmake-par.yml77
-rw-r--r--.github/workflows/main-cmake.yml112
-rw-r--r--.github/workflows/main.yml3
-rw-r--r--CMakeInstallation.cmake5
11 files changed, 542 insertions, 215 deletions
diff --git a/.github/workflows/autotools.yml b/.github/workflows/autotools.yml
index d0cf557..4075b25 100644
--- a/.github/workflows/autotools.yml
+++ b/.github/workflows/autotools.yml
@@ -17,7 +17,19 @@ jobs:
call-parallel-special-autotools:
name: "Autotools Parallel Special Workflows"
+ uses: ./.github/workflows/main-auto-par-spc.yml
+
+ call-debug-parallel-autotools:
+ name: "Autotools Parallel Workflows"
uses: ./.github/workflows/main-auto-par.yml
+ with:
+ build_mode: "debug"
+
+ call-release-parallel-autotools:
+ name: "Autotools Parallel Workflows"
+ uses: ./.github/workflows/main-auto-par.yml
+ with:
+ build_mode: "production"
call-debug-thread-autotools:
name: "Autotools Debug Thread-Safety Workflows"
diff --git a/.github/workflows/cmake-bintest.yml b/.github/workflows/cmake-bintest.yml
new file mode 100644
index 0000000..e076bba
--- /dev/null
+++ b/.github/workflows/cmake-bintest.yml
@@ -0,0 +1,218 @@
+name: hdf5 examples bintest runs
+
+# Controls when the action will run. Triggers the workflow on a schedule
+on:
+ workflow_call:
+ inputs:
+ build_mode:
+ description: "release vs. debug build"
+ required: true
+ type: string
+
+permissions:
+ contents: read
+
+# A workflow run is made up of one or more jobs that can run sequentially or
+# in parallel
+jobs:
+ test_binary_win:
+ # Windows w/ MSVC + CMake
+ #
+ name: "Windows MSVC Binary Test"
+ runs-on: windows-latest
+ steps:
+ - name: Install Dependencies (Windows)
+ run: choco install ninja
+
+ - name: Set up JDK 19
+ uses: actions/setup-java@v3
+ with:
+ java-version: '19'
+ distribution: 'temurin'
+
+ - name: Enable Developer Command Prompt
+ uses: ilammy/msvc-dev-cmd@v1.12.1
+
+ # Get files created by cmake-ctest script
+ - name: Get published binary (Windows)
+ uses: actions/download-artifact@f44cd7b40bfd40b6aa1cc1b9b5b7bf03d3c67110 # v4.1.0
+ with:
+ name: zip-vs2022_cl-${{ inputs.build_mode }}-binary
+ path: ${{ github.workspace }}/hdf5
+
+ - name: Uncompress hdf5 binary (Win)
+ working-directory: ${{ github.workspace }}/hdf5
+ run: 7z x HDF5-*-win64.zip
+ shell: bash
+
+ - name: List files for the space (Win)
+ run: |
+ ls -l ${{ github.workspace }}
+ ls -l ${{ github.workspace }}/hdf5
+
+ - name: create hdf5 location (Win)
+ working-directory: ${{ github.workspace }}/hdf5
+ run: |
+ New-Item -Path "${{ github.workspace }}/HDF_Group/HDF5" -ItemType Directory
+ Copy-Item -Path "${{ github.workspace }}/hdf5/HDF*/*" -Destination "${{ github.workspace }}/HDF_Group/HDF5" -Recurse
+ shell: pwsh
+
+ - name: List files for the space (Win)
+ run: ls -l ${{ github.workspace }}/HDF_Group/HDF5
+
+ - name: set hdf5lib name
+ id: set-hdf5lib-name
+ run: |
+ HDF5DIR="${{ github.workspace }}/HDF_Group/HDF5"
+ echo "HDF5_ROOT=$HDF5DIR$FILE_NAME_HDF5" >> $GITHUB_OUTPUT
+ echo "HDF5_PLUGIN_PATH=$HDF5_ROOT/lib/plugin" >> $GITHUB_OUTPUT
+ shell: bash
+
+ - name: List files for the binaries (Win)
+ run: |
+ ls -l ${{ github.workspace }}/HDF_Group/HDF5
+
+ - name: using powershell
+ shell: pwsh
+ run: Get-Location
+
+ - name: List files for the space (Windows)
+ run: |
+ Get-ChildItem -Path ${{ github.workspace }}
+ Get-ChildItem -Path ${{ runner.workspace }}
+ shell: pwsh
+
+ - name: Run ctest (Windows)
+ env:
+ HDF5_ROOT: ${{ steps.set-hdf5lib-name.outputs.HDF5_ROOT }}
+ HDF5_PLUGIN_PATH: ${{ steps.set-hdf5lib-name.outputs.HDF5_PLUGIN_PATH }}
+ run: |
+ cd "${{ steps.set-hdf5lib-name.outputs.HDF5_ROOT }}/HDF5Examples"
+ cmake --workflow --preset=ci-StdShar-MSVC --fresh
+ shell: bash
+
+ test_binary_linux:
+ # Linux (Ubuntu) w/ gcc + CMake
+ #
+ name: "Ubuntu gcc Binary Test"
+ runs-on: ubuntu-latest
+ steps:
+ - name: Install CMake Dependencies (Linux)
+ run: sudo apt-get install ninja-build doxygen graphviz
+
+ - name: Set up JDK 19
+ uses: actions/setup-java@v3
+ with:
+ java-version: '19'
+ distribution: 'temurin'
+
+ - name: Get published binary (Linux)
+ uses: actions/download-artifact@f44cd7b40bfd40b6aa1cc1b9b5b7bf03d3c67110 # v4.1.0
+ with:
+ name: tgz-ubuntu-2204_gcc-${{ inputs.build_mode }}-binary
+ path: ${{ github.workspace }}
+
+ - name: Uncompress hdf5 binary (Linux)
+ run: |
+ cd "${{ github.workspace }}"
+ tar -zxvf ${{ github.workspace }}/HDF5-*-Linux.tar.gz --strip-components 1
+
+ - name: set hdf5lib name
+ id: set-hdf5lib-name
+ run: |
+ HDF5DIR=${{ github.workspace }}/HDF_Group/HDF5/
+ FILE_NAME_HDF5=$(ls ${{ github.workspace }}/HDF_Group/HDF5)
+ echo "HDF5_ROOT=$HDF5DIR$FILE_NAME_HDF5" >> $GITHUB_OUTPUT
+ echo "HDF5_PLUGIN_PATH=$HDF5_ROOT/lib/plugin" >> $GITHUB_OUTPUT
+
+ - name: List files for the binaries (Linux)
+ run: |
+ ls -l ${{ github.workspace }}/HDF_Group/HDF5
+
+ - name: Set file base name (Linux)
+ id: set-file-base
+ run: |
+ FILE_NAME_BASE=$(echo "${{ inputs.file_base }}")
+ echo "FILE_BASE=$FILE_NAME_BASE" >> $GITHUB_OUTPUT
+
+ - name: List files for the space (Linux)
+ run: |
+ ls -l ${{ github.workspace }}
+ ls ${{ runner.workspace }}
+
+ - name: Run ctest (Linux)
+ env:
+ HDF5_ROOT: ${{ steps.set-hdf5lib-name.outputs.HDF5_ROOT }}
+ HDF5_PLUGIN_PATH: ${{ steps.set-hdf5lib-name.outputs.HDF5_PLUGIN_PATH }}
+ run: |
+ cd "${{ steps.set-hdf5lib-name.outputs.HDF5_ROOT }}/share/HDF5Examples"
+ cmake --workflow --preset=ci-StdShar-GNUC --fresh
+ shell: bash
+
+ test_binary_mac:
+ # MacOS w/ Clang + CMake
+ #
+ name: "MacOS Clang Binary Test"
+ runs-on: macos-13
+ steps:
+ - name: Install Dependencies (MacOS)
+ run: brew install ninja doxygen
+
+ - name: Set up JDK 19
+ uses: actions/setup-java@v3
+ with:
+ java-version: '19'
+ distribution: 'temurin'
+
+ - name: Get published binary (MacOS)
+ uses: actions/download-artifact@f44cd7b40bfd40b6aa1cc1b9b5b7bf03d3c67110 # v4.1.0
+ with:
+ name: tgz-osx12-${{ inputs.build_mode }}-binary
+ path: ${{ github.workspace }}
+
+ - name: Uncompress hdf5 binary (MacOS)
+ run: |
+ cd "${{ github.workspace }}"
+ tar -zxvf ${{ github.workspace }}/HDF5-*-Darwin.tar.gz --strip-components 1
+
+ - name: set hdf5lib name
+ id: set-hdf5lib-name
+ run: |
+ HDF5DIR=${{ github.workspace }}/HDF_Group/HDF5/
+ FILE_NAME_HDF5=$(ls ${{ github.workspace }}/HDF_Group/HDF5)
+ echo "HDF5_ROOT=$HDF5DIR$FILE_NAME_HDF5" >> $GITHUB_OUTPUT
+ echo "HDF5_PLUGIN_PATH=$HDF5_ROOT/lib/plugin" >> $GITHUB_OUTPUT
+
+ - name: List files for the binaries (MacOS)
+ run: |
+ ls -l ${{ github.workspace }}/HDF_Group/HDF5
+
+ - name: Set file base name (MacOS)
+ id: set-file-base
+ run: |
+ FILE_NAME_BASE=$(echo "${{ inputs.file_base }}")
+ echo "FILE_BASE=$FILE_NAME_BASE" >> $GITHUB_OUTPUT
+
+ - name: List files for the space (MacOS)
+ run: |
+ ls ${{ github.workspace }}
+ ls ${{ runner.workspace }}
+
+ # symlinks the compiler executables to a common location
+ - name: Setup GNU Fortran
+ uses: fortran-lang/setup-fortran@v1
+ id: setup-fortran
+ with:
+ compiler: gcc
+ version: 12
+
+ - name: Run ctest (MacOS)
+ id: run-ctest
+ env:
+ HDF5_ROOT: ${{ steps.set-hdf5lib-name.outputs.HDF5_ROOT }}
+ HDF5_PLUGIN_PATH: ${{ steps.set-hdf5lib-name.outputs.HDF5_PLUGIN_PATH }}
+ run: |
+ cd "${{ steps.set-hdf5lib-name.outputs.HDF5_ROOT }}/share/HDF5Examples"
+ cmake --workflow --preset=ci-StdShar-Clang --fresh
+ shell: bash
+
diff --git a/.github/workflows/cmake-ctest.yml b/.github/workflows/cmake-ctest.yml
index 00fb7b4..ec69415 100644
--- a/.github/workflows/cmake-ctest.yml
+++ b/.github/workflows/cmake-ctest.yml
@@ -177,7 +177,7 @@ jobs:
# MacOS w/ Clang + CMake
#
name: "MacOS Clang CMake"
- runs-on: macos-11
+ runs-on: macos-13
steps:
- name: Install Dependencies (MacOS)
run: brew install ninja
diff --git a/.github/workflows/cmake.yml b/.github/workflows/cmake.yml
index c22c753..7911be7 100644
--- a/.github/workflows/cmake.yml
+++ b/.github/workflows/cmake.yml
@@ -19,30 +19,49 @@ jobs:
name: "CMake Debug Thread-Safety Workflows"
uses: ./.github/workflows/main-cmake.yml
with:
- thread_safety: true
+ thread_safety: "TS"
build_mode: "Debug"
call-release-thread-cmake:
name: "CMake Release Thread-Safety Workflows"
uses: ./.github/workflows/main-cmake.yml
with:
- thread_safety: true
+ thread_safety: "TS"
build_mode: "Release"
call-debug-cmake:
name: "CMake Debug Workflows"
uses: ./.github/workflows/main-cmake.yml
with:
- thread_safety: false
+ thread_safety: ""
build_mode: "Debug"
call-release-cmake:
name: "CMake Release Workflows"
uses: ./.github/workflows/main-cmake.yml
with:
- thread_safety: false
+ thread_safety: ""
build_mode: "Release"
+ call-release-bintest:
+ name: "CMake Test Release Binaries"
+ needs: call-release-cmake
+ uses: ./.github/workflows/cmake-bintest.yml
+ with:
+ build_mode: "Release"
+
+ call-release-par:
+ name: "CMake Parallel Release Workflows"
+ uses: ./.github/workflows/main-cmake-par.yml
+ with:
+ build_mode: "Release"
+
+ call-debug-par:
+ name: "CMake Parallel Debug Workflows"
+ uses: ./.github/workflows/main-cmake-par.yml
+ with:
+ build_mode: "Debug"
+
call-release-cmake-intel:
name: "CMake Intel Workflows"
uses: ./.github/workflows/intel-cmake.yml
diff --git a/.github/workflows/main-auto-par-spc.yml b/.github/workflows/main-auto-par-spc.yml
new file mode 100644
index 0000000..f6c3316
--- /dev/null
+++ b/.github/workflows/main-auto-par-spc.yml
@@ -0,0 +1,137 @@
+name: hdf5 dev autotools parallel special CI
+
+# Controls when the action will run. Triggers the workflow on a call
+on:
+ workflow_call:
+
+permissions:
+ contents: read
+
+# A workflow run is made up of one or more jobs that can run sequentially or
+# in parallel. We just have one job, but the matrix items defined below will
+# run in parallel.
+jobs:
+ #
+ # SPECIAL AUTOTOOLS BUILDS
+ #
+ # These do not run tests and are not built into the matrix and instead
+ # become NEW configs as their name would clobber one of the matrix
+ # names (so make sure the names are UNIQUE).
+ #
+
+ build_parallel_debug_werror:
+ name: "gcc DBG parallel -Werror (build only)"
+ runs-on: ubuntu-latest
+ steps:
+ # SETUP
+ # Only CMake need ninja-build, but we just install it unilaterally
+ # libssl, etc. are needed for the ros3 VFD
+ - name: Install Linux Dependencies
+ run: |
+ sudo apt update
+ sudo apt-get install ninja-build doxygen graphviz
+ sudo apt install libssl3 libssl-dev libcurl4 libcurl4-openssl-dev
+ sudo apt install gcc-12 g++-12 gfortran-12
+ sudo apt install automake autoconf libtool libtool-bin
+ sudo apt install libaec0 libaec-dev
+ sudo apt install openmpi-bin openmpi-common mpi-default-dev
+ echo "CC=mpicc" >> $GITHUB_ENV
+ echo "FC=mpif90" >> $GITHUB_ENV
+
+ # Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it
+ - name: Get Sources
+ uses: actions/checkout@v4.1.1
+
+ # AUTOTOOLS CONFIGURE
+ - name: Autotools Configure
+ run: |
+ sh ./autogen.sh
+ mkdir "${{ runner.workspace }}/build"
+ cd "${{ runner.workspace }}/build"
+ CFLAGS=-Werror $GITHUB_WORKSPACE/configure \
+ --enable-build-mode=debug \
+ --enable-deprecated-symbols \
+ --with-default-api-version=v114 \
+ --enable-shared \
+ --enable-parallel \
+ --enable-subfiling-vfd \
+ --disable-cxx \
+ --disable-fortran \
+ --disable-java \
+ --disable-mirror-vfd \
+ --enable-direct-vfd \
+ --disable-ros3-vfd \
+ shell: bash
+
+ # BUILD
+ - name: Autotools Build
+ run: make -j3
+ working-directory: ${{ runner.workspace }}/build
+
+ # INSTALL (note that this runs even when we don't run the tests)
+ - name: Autotools Install
+ run: make install
+ working-directory: ${{ runner.workspace }}/build
+
+ - name: Autotools Verify Install
+ run: make check-install
+ working-directory: ${{ runner.workspace }}/build
+
+ build_parallel_release_werror:
+ name: "gcc REL parallel -Werror (build only)"
+ runs-on: ubuntu-latest
+ steps:
+ # SETUP
+ # Only CMake need ninja-build, but we just install it unilaterally
+ # libssl, etc. are needed for the ros3 VFD
+ - name: Install Linux Dependencies
+ run: |
+ sudo apt update
+ sudo apt-get install ninja-build doxygen graphviz
+ sudo apt install libssl3 libssl-dev libcurl4 libcurl4-openssl-dev
+ sudo apt install gcc-12 g++-12 gfortran-12
+ sudo apt install automake autoconf libtool libtool-bin
+ sudo apt install libaec0 libaec-dev
+ sudo apt install openmpi-bin openmpi-common mpi-default-dev
+ echo "CC=mpicc" >> $GITHUB_ENV
+ echo "FC=mpif90" >> $GITHUB_ENV
+
+ # Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it
+ - name: Get Sources
+ uses: actions/checkout@v4.1.1
+
+ # AUTOTOOLS CONFIGURE
+ - name: Autotools Configure
+ run: |
+ sh ./autogen.sh
+ mkdir "${{ runner.workspace }}/build"
+ cd "${{ runner.workspace }}/build"
+ CFLAGS=-Werror $GITHUB_WORKSPACE/configure \
+ --enable-build-mode=production \
+ --enable-deprecated-symbols \
+ --with-default-api-version=v114 \
+ --enable-shared \
+ --enable-parallel \
+ --enable-subfiling-vfd \
+ --disable-cxx \
+ --disable-fortran \
+ --disable-java \
+ --disable-mirror-vfd \
+ --enable-direct-vfd \
+ --disable-ros3-vfd \
+ shell: bash
+
+ # BUILD
+ - name: Autotools Build
+ run: make -j3
+ working-directory: ${{ runner.workspace }}/build
+
+ # INSTALL (note that this runs even when we don't run the tests)
+ - name: Autotools Install
+ run: make install
+ working-directory: ${{ runner.workspace }}/build
+
+ - name: Autotools Verify Install
+ run: make check-install
+ working-directory: ${{ runner.workspace }}/build
+
diff --git a/.github/workflows/main-auto-par.yml b/.github/workflows/main-auto-par.yml
index 70cf4bd..9f1522a 100644
--- a/.github/workflows/main-auto-par.yml
+++ b/.github/workflows/main-auto-par.yml
@@ -1,8 +1,13 @@
-name: hdf5 dev autotools CI
+name: hdf5 dev autotools parallel CI
# Controls when the action will run. Triggers the workflow on a call
on:
workflow_call:
+ inputs:
+ build_mode:
+ description: "release vs. debug build"
+ required: true
+ type: string
permissions:
contents: read
@@ -12,78 +17,23 @@ permissions:
# run in parallel.
jobs:
#
- # SPECIAL AUTOTOOLS BUILDS
- #
- # These do not run tests and are not built into the matrix and instead
- # become NEW configs as their name would clobber one of the matrix
- # names (so make sure the names are UNIQUE).
+ # The GitHub runners are inadequate for running parallel HDF5 tests,
+ # so we catch most issues in daily testing. What we have here is just
+ # a compile check to make sure nothing obvious is broken.
+ # A workflow that builds the library
+ # Parallel Linux (Ubuntu) w/ gcc + Autotools
#
+ Autotools_build_parallel:
+ name: "Parallel GCC-${{ inputs.build_mode }}"
+ # Don't run the action if the commit message says to skip CI
+ if: "!contains(github.event.head_commit.message, 'skip-ci')"
- build_parallel_debug_werror:
- name: "gcc DBG parallel -Werror (build only)"
+ # The type of runner that the job will run on
runs-on: ubuntu-latest
- steps:
- # SETUP
- # Only CMake need ninja-build, but we just install it unilaterally
- # libssl, etc. are needed for the ros3 VFD
- - name: Install Linux Dependencies
- run: |
- sudo apt update
- sudo apt-get install ninja-build doxygen graphviz
- sudo apt install libssl3 libssl-dev libcurl4 libcurl4-openssl-dev
- sudo apt install gcc-12 g++-12 gfortran-12
- sudo apt install automake autoconf libtool libtool-bin
- sudo apt install libaec0 libaec-dev
- sudo apt install openmpi-bin openmpi-common mpi-default-dev
- echo "CC=mpicc" >> $GITHUB_ENV
- echo "FC=mpif90" >> $GITHUB_ENV
-
- # Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it
- - name: Get Sources
- uses: actions/checkout@v4.1.1
- # AUTOTOOLS CONFIGURE
- - name: Autotools Configure
- run: |
- sh ./autogen.sh
- mkdir "${{ runner.workspace }}/build"
- cd "${{ runner.workspace }}/build"
- CFLAGS=-Werror $GITHUB_WORKSPACE/configure \
- --enable-build-mode=debug \
- --enable-deprecated-symbols \
- --with-default-api-version=v114 \
- --enable-shared \
- --enable-parallel \
- --enable-subfiling-vfd \
- --disable-cxx \
- --disable-fortran \
- --disable-java \
- --disable-mirror-vfd \
- --enable-direct-vfd \
- --disable-ros3-vfd \
- shell: bash
-
- # BUILD
- - name: Autotools Build
- run: make -j3
- working-directory: ${{ runner.workspace }}/build
-
- # INSTALL (note that this runs even when we don't run the tests)
- - name: Autotools Install
- run: make install
- working-directory: ${{ runner.workspace }}/build
-
- - name: Autotools Verify Install
- run: make check-install
- working-directory: ${{ runner.workspace }}/build
-
- build_parallel_release_werror:
- name: "gcc REL parallel -Werror (build only)"
- runs-on: ubuntu-latest
+ # Steps represent a sequence of tasks that will be executed as part of the job
steps:
# SETUP
- # Only CMake need ninja-build, but we just install it unilaterally
- # libssl, etc. are needed for the ros3 VFD
- name: Install Linux Dependencies
run: |
sudo apt update
@@ -106,32 +56,22 @@ jobs:
sh ./autogen.sh
mkdir "${{ runner.workspace }}/build"
cd "${{ runner.workspace }}/build"
- CFLAGS=-Werror $GITHUB_WORKSPACE/configure \
- --enable-build-mode=production \
+ CC=mpicc $GITHUB_WORKSPACE/configure \
+ --enable-build-mode=${{ inputs.build_mode }} \
--enable-deprecated-symbols \
--with-default-api-version=v114 \
--enable-shared \
--enable-parallel \
- --enable-subfiling-vfd \
--disable-cxx \
- --disable-fortran \
+ --enable-fortran \
--disable-java \
--disable-mirror-vfd \
- --enable-direct-vfd \
+ --disable-direct-vfd \
--disable-ros3-vfd \
+ --with-szlib=yes
shell: bash
# BUILD
- name: Autotools Build
run: make -j3
working-directory: ${{ runner.workspace }}/build
-
- # INSTALL (note that this runs even when we don't run the tests)
- - name: Autotools Install
- run: make install
- working-directory: ${{ runner.workspace }}/build
-
- - name: Autotools Verify Install
- run: make check-install
- working-directory: ${{ runner.workspace }}/build
-
diff --git a/.github/workflows/main-auto.yml b/.github/workflows/main-auto.yml
index 57b1c3d..51ddfdb 100644
--- a/.github/workflows/main-auto.yml
+++ b/.github/workflows/main-auto.yml
@@ -120,63 +120,3 @@ jobs:
- name: Autotools Verify Install
run: make check-install
working-directory: ${{ runner.workspace }}/build
-
- #
- # The GitHub runners are inadequate for running parallel HDF5 tests,
- # so we catch most issues in daily testing. What we have here is just
- # a compile check to make sure nothing obvious is broken.
- # A workflow that builds the library
- # Parallel Linux (Ubuntu) w/ gcc + Autotools
- #
- Autotools_build_parallel:
- name: "Parallel GCC-${{ inputs.build_mode }}-TS=${{ inputs.thread_safety }}d"
- # Don't run the action if the commit message says to skip CI
- if: "!contains(github.event.head_commit.message, 'skip-ci')"
-
- # The type of runner that the job will run on
- runs-on: ubuntu-latest
-
- # Steps represent a sequence of tasks that will be executed as part of the job
- steps:
- # SETUP
- - name: Install Linux Dependencies
- run: |
- sudo apt update
- sudo apt-get install ninja-build doxygen graphviz
- sudo apt install libssl3 libssl-dev libcurl4 libcurl4-openssl-dev
- sudo apt install gcc-12 g++-12 gfortran-12
- sudo apt install automake autoconf libtool libtool-bin
- sudo apt install libaec0 libaec-dev
- sudo apt install openmpi-bin openmpi-common mpi-default-dev
- echo "CC=mpicc" >> $GITHUB_ENV
- echo "FC=mpif90" >> $GITHUB_ENV
-
- # Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it
- - name: Get Sources
- uses: actions/checkout@v4.1.1
-
- # AUTOTOOLS CONFIGURE
- - name: Autotools Configure
- run: |
- sh ./autogen.sh
- mkdir "${{ runner.workspace }}/build"
- cd "${{ runner.workspace }}/build"
- CC=mpicc $GITHUB_WORKSPACE/configure \
- --enable-build-mode=${{ inputs.build_mode }} \
- --enable-deprecated-symbols \
- --with-default-api-version=v114 \
- --enable-shared \
- --enable-parallel \
- --disable-cxx \
- --enable-fortran \
- --disable-java \
- --disable-mirror-vfd \
- --disable-direct-vfd \
- --disable-ros3-vfd \
- --with-szlib=yes
- shell: bash
-
- # BUILD
- - name: Autotools Build
- run: make -j3
- working-directory: ${{ runner.workspace }}/build
diff --git a/.github/workflows/main-cmake-par.yml b/.github/workflows/main-cmake-par.yml
new file mode 100644
index 0000000..faecefc
--- /dev/null
+++ b/.github/workflows/main-cmake-par.yml
@@ -0,0 +1,77 @@
+name: hdf5 dev PAR CMake CI
+
+# Controls when the action will run. Triggers the workflow on a call
+on:
+ workflow_call:
+ inputs:
+ build_mode:
+ description: "release vs. debug build"
+ required: true
+ type: string
+
+permissions:
+ contents: read
+
+# A workflow run is made up of one or more jobs that can run sequentially or
+# in parallel. We just have one job, but the matrix items defined below will
+# run in parallel.
+jobs:
+ #
+ # The GitHub runners are inadequate for running parallel HDF5 tests,
+ # so we catch most issues in daily testing. What we have here is just
+ # a compile check to make sure nothing obvious is broken.
+ # A workflow that builds the library
+ # Parallel Linux (Ubuntu) w/ gcc + Autotools
+ #
+ CMake_build_parallel:
+ name: "Parallel GCC-${{ inputs.build_mode }}"
+ # Don't run the action if the commit message says to skip CI
+ if: ${{ inputs.thread_safety != 'TS' }}
+
+ # The type of runner that the job will run on
+ runs-on: ubuntu-latest
+
+ # Steps represent a sequence of tasks that will be executed as part of the job
+ steps:
+ # SETUP
+ - name: Install Linux Dependencies
+ run: |
+ sudo apt update
+ sudo apt-get install ninja-build doxygen graphviz
+ sudo apt install libssl3 libssl-dev libcurl4 libcurl4-openssl-dev
+ sudo apt install gcc-12 g++-12 gfortran-12
+ sudo apt install libaec0 libaec-dev
+ sudo apt install openmpi-bin openmpi-common mpi-default-dev
+ echo "CC=mpicc" >> $GITHUB_ENV
+ echo "FC=mpif90" >> $GITHUB_ENV
+
+ # Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it
+ - name: Get Sources
+ uses: actions/checkout@v4.1.1
+
+ # CMAKE CONFIGURE
+ - name: CMake Configure
+ run: |
+ mkdir "${{ runner.workspace }}/build"
+ cd "${{ runner.workspace }}/build"
+ CC=mpicc cmake -C $GITHUB_WORKSPACE/config/cmake/cacheinit.cmake \
+ -DCMAKE_BUILD_TYPE=${{ inputs.build_mode }} \
+ -DBUILD_SHARED_LIBS=ON \
+ -DHDF5_ENABLE_ALL_WARNINGS=ON \
+ -DHDF5_ENABLE_PARALLEL:BOOL=ON \
+ -DHDF5_BUILD_CPP_LIB:BOOL=OFF \
+ -DHDF5_BUILD_FORTRAN=ON \
+ -DHDF5_BUILD_JAVA=OFF \
+ -DLIBAEC_USE_LOCALCONTENT=OFF \
+ -DZLIB_USE_LOCALCONTENT=OFF \
+ -DHDF5_ENABLE_MIRROR_VFD:BOOL=OFF \
+ -DHDF5_ENABLE_DIRECT_VFD:BOOL=OFF \
+ -DHDF5_ENABLE_ROS3_VFD:BOOL=OFF \
+ -DHDF5_PACK_EXAMPLES:BOOL=ON \
+ $GITHUB_WORKSPACE
+ shell: bash
+
+ # BUILD
+ - name: CMake Build
+ run: cmake --build . --parallel 3 --config ${{ inputs.build_mode }}
+ working-directory: ${{ runner.workspace }}/build
diff --git a/.github/workflows/main-cmake.yml b/.github/workflows/main-cmake.yml
index 3294fb1..14e1eff 100644
--- a/.github/workflows/main-cmake.yml
+++ b/.github/workflows/main-cmake.yml
@@ -5,9 +5,10 @@ on:
workflow_call:
inputs:
thread_safety:
- description: "thread-safety on/off"
+ description: "TS or empty"
required: true
- type: boolean
+ type: string
+
build_mode:
description: "release vs. debug build"
required: true
@@ -47,7 +48,7 @@ jobs:
#
# No Fortran, parallel, or VFDs that rely on POSIX things
- name: "Windows MSVC"
- os: windows-2022
+ os: windows-latest
toolchain: ""
cpp: ON
fortran: OFF
@@ -82,7 +83,7 @@ jobs:
mirror_vfd: ON
direct_vfd: ON
ros3_vfd: ON
- toolchain: "config/toolchain/gcc.cmake"
+ toolchain: "-DCMAKE_TOOLCHAIN_FILE=config/toolchain/gcc.cmake"
generator: "-G Ninja"
run_tests: true
@@ -105,14 +106,14 @@ jobs:
mirror_vfd: ON
direct_vfd: OFF
ros3_vfd: OFF
- toolchain: "config/toolchain/clang.cmake"
+ toolchain: "-DCMAKE_TOOLCHAIN_FILE=config/toolchain/clang.cmake"
generator: "-G Ninja"
run_tests: true
# Sets the job's name from the properties
- name: "${{ matrix.name }}-${{ inputs.build_mode }}-TS=${{ inputs.thread_safety }}"
+ name: "${{ matrix.name }}-${{ inputs.build_mode }}-${{ inputs.thread_safety }}"
# Don't run the action if the commit message says to skip CI
if: "!contains(github.event.head_commit.message, 'skip-ci')"
@@ -165,7 +166,7 @@ jobs:
echo "CXX=cl.exe" >> $GITHUB_ENV
echo "CC=cl.exe" >> $GITHUB_ENV
if: matrix.os == 'windows-latest'
-
+
# Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it
- name: Get Sources
uses: actions/checkout@v4.1.1
@@ -181,7 +182,7 @@ jobs:
cmake -C $GITHUB_WORKSPACE/config/cmake/cacheinit.cmake \
${{ matrix.generator }} \
-DCMAKE_BUILD_TYPE=${{ inputs.build_mode }} \
- -DCMAKE_TOOLCHAIN_FILE=${{ matrix.toolchain }} \
+ ${{ matrix.toolchain }} \
-DBUILD_SHARED_LIBS=ON \
-DHDF5_ENABLE_ALL_WARNINGS=ON \
-DHDF5_ENABLE_DOXY_WARNINGS=ON \
@@ -195,9 +196,11 @@ jobs:
-DHDF5_ENABLE_MIRROR_VFD:BOOL=${{ matrix.mirror_vfd }} \
-DHDF5_ENABLE_DIRECT_VFD:BOOL=${{ matrix.direct_vfd }} \
-DHDF5_ENABLE_ROS3_VFD:BOOL=${{ matrix.ros3_vfd }} \
+ -DHDF5_PACK_EXAMPLES:BOOL=ON \
+ -DHDF5_PACKAGE_EXTLIBS:BOOL=ON \
$GITHUB_WORKSPACE
shell: bash
- if: "! (matrix.thread_safety)"
+ if: ${{ inputs.thread_safety != 'TS' }}
- name: CMake Configure (Thread-Safe)
@@ -207,8 +210,9 @@ jobs:
cmake -C $GITHUB_WORKSPACE/config/cmake/cacheinit.cmake \
${{ matrix.generator }} \
-DCMAKE_BUILD_TYPE=${{ inputs.build_mode }} \
- -DCMAKE_TOOLCHAIN_FILE=${{ matrix.toolchain }} \
+ ${{ matrix.toolchain }} \
-DBUILD_SHARED_LIBS=ON \
+ -DBUILD_STATIC_LIBS=${{ (matrix.os != 'windows-latest') }} \
-DHDF5_ENABLE_ALL_WARNINGS=ON \
-DHDF5_ENABLE_THREADSAFE:BOOL=ON \
-DHDF5_ENABLE_PARALLEL:BOOL=${{ matrix.parallel }} \
@@ -222,9 +226,10 @@ jobs:
-DHDF5_ENABLE_MIRROR_VFD:BOOL=${{ matrix.mirror_vfd }} \
-DHDF5_ENABLE_DIRECT_VFD:BOOL=${{ matrix.direct_vfd }} \
-DHDF5_ENABLE_ROS3_VFD:BOOL=${{ matrix.ros3_vfd }} \
+ -DHDF5_PACK_EXAMPLES:BOOL=ON \
$GITHUB_WORKSPACE
shell: bash
- if: (matrix.thread_safety)
+ if: ${{ inputs.thread_safety == 'TS' }}
#
# BUILD
@@ -243,75 +248,48 @@ jobs:
- name: CMake Run Tests
run: ctest . --parallel 2 -C ${{ inputs.build_mode }} -V
working-directory: ${{ runner.workspace }}/build
- if: (matrix.run_tests) && ! (matrix.thread_safety)
+ if: ${{ matrix.run_tests && (inputs.thread_safety != 'TS') }}
# THREAD-SAFE
- name: CMake Run Thread-Safe Tests
run: ctest . --parallel 2 -C ${{ inputs.build_mode }} -V -R ttsafe
working-directory: ${{ runner.workspace }}/build
- if: (matrix.run_tests) && (matrix.thread_safety)
+ if: ${{ matrix.run_tests && (inputs.thread_safety == 'TS') }}
#
# INSTALL (note that this runs even when we don't run the tests)
#
- #
- # The GitHub runners are inadequate for running parallel HDF5 tests,
- # so we catch most issues in daily testing. What we have here is just
- # a compile check to make sure nothing obvious is broken.
- # A workflow that builds the library
- # Parallel Linux (Ubuntu) w/ gcc + Autotools
- #
- CMake_build_parallel:
- name: "Parallel GCC-${{ inputs.build_mode }}-TS=${{ inputs.thread_safety }}"
- # Don't run the action if the commit message says to skip CI
- if: "!contains(github.event.head_commit.message, 'skip-ci')"
-
- # The type of runner that the job will run on
- runs-on: ubuntu-latest
+ - name: CMake Run Package
+ run: cpack -C ${{ inputs.build_mode }} -V
+ working-directory: ${{ runner.workspace }}/build
- # Steps represent a sequence of tasks that will be executed as part of the job
- steps:
- # SETUP
- - name: Install Linux Dependencies
+ - name: List files in the space
run: |
- sudo apt update
- sudo apt-get install ninja-build doxygen graphviz
- sudo apt install libssl3 libssl-dev libcurl4 libcurl4-openssl-dev
- sudo apt install gcc-12 g++-12 gfortran-12
- sudo apt install libaec0 libaec-dev
- sudo apt install openmpi-bin openmpi-common mpi-default-dev
- echo "CC=mpicc" >> $GITHUB_ENV
- echo "FC=mpif90" >> $GITHUB_ENV
+ ls -l ${{ runner.workspace }}/build
- # Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it
- - name: Get Sources
- uses: actions/checkout@v4.1.1
+ # Save files created by ctest script
+ - name: Save published binary (Windows)
+ uses: actions/upload-artifact@v4
+ with:
+ name: zip-vs2022_cl-${{ inputs.build_mode }}-binary
+ path: ${{ runner.workspace }}/build/HDF5-*-win64.zip
+ if-no-files-found: error # 'warn' or 'ignore' are also available, defaults to `warn`
+ if: ${{ (matrix.os == 'windows-latest') && (inputs.thread_safety != 'TS') }}
- # CMAKE CONFIGURE
- - name: CMake Configure
- run: |
- mkdir "${{ runner.workspace }}/build"
- cd "${{ runner.workspace }}/build"
- CC=mpicc cmake -C $GITHUB_WORKSPACE/config/cmake/cacheinit.cmake \
- -DCMAKE_BUILD_TYPE=${{ inputs.build_mode }} \
- -DCMAKE_TOOLCHAIN_FILE=${{ matrix.toolchain }} \
- -DBUILD_SHARED_LIBS=ON \
- -DHDF5_ENABLE_ALL_WARNINGS=ON \
- -DHDF5_ENABLE_PARALLEL:BOOL=ON \
- -DHDF5_BUILD_CPP_LIB:BOOL=OFF \
- -DHDF5_BUILD_FORTRAN=ON \
- -DHDF5_BUILD_JAVA=OFF \
- -DLIBAEC_USE_LOCALCONTENT=OFF \
- -DZLIB_USE_LOCALCONTENT=OFF \
- -DHDF5_ENABLE_MIRROR_VFD:BOOL=OFF \
- -DHDF5_ENABLE_DIRECT_VFD:BOOL=OFF \
- -DHDF5_ENABLE_ROS3_VFD:BOOL=OFF \
- $GITHUB_WORKSPACE
- shell: bash
+ - name: Save published binary (linux)
+ uses: actions/upload-artifact@v4
+ with:
+ name: tgz-ubuntu-2204_gcc-${{ inputs.build_mode }}-binary
+ path: ${{ runner.workspace }}/build/HDF5-*-Linux.tar.gz
+ if-no-files-found: error # 'warn' or 'ignore' are also available, defaults to `warn`
+ if: ${{ (matrix.os == 'ubuntu-latest') && (inputs.thread_safety != 'TS') }}
- # BUILD
- - name: CMake Build
- run: cmake --build . --parallel 3 --config ${{ inputs.build_mode }}
- working-directory: ${{ runner.workspace }}/build
+ - name: Save published binary (Mac)
+ uses: actions/upload-artifact@v4
+ with:
+ name: tgz-osx12-${{ inputs.build_mode }}-binary
+ path: ${{ runner.workspace }}/build/HDF5-*-Darwin.tar.gz
+ if-no-files-found: error # 'warn' or 'ignore' are also available, defaults to `warn`
+ if: ${{ (matrix.os == 'macos-13') && (inputs.thread_safety != 'TS') }}
diff --git a/.github/workflows/main.yml b/.github/workflows/main.yml
index 43513c5..3f878b1 100644
--- a/.github/workflows/main.yml
+++ b/.github/workflows/main.yml
@@ -30,7 +30,10 @@ jobs:
workflow-autotools:
name: "Autotools Workflows"
uses: ./.github/workflows/autotools.yml
+ if: "!contains(github.event.head_commit.message, 'skip-ci')"
workflow-cmake:
name: "CMake Workflows"
uses: ./.github/workflows/cmake.yml
+ if: "!contains(github.event.head_commit.message, 'skip-ci')"
+
diff --git a/CMakeInstallation.cmake b/CMakeInstallation.cmake
index aae6d65..9229c4e 100644
--- a/CMakeInstallation.cmake
+++ b/CMakeInstallation.cmake
@@ -356,7 +356,10 @@ if (NOT HDF5_EXTERNALLY_CONFIGURED AND NOT HDF5_NO_PACKAGES)
endif ()
elseif (APPLE)
list (APPEND CPACK_GENERATOR "STGZ")
- list (APPEND CPACK_GENERATOR "DragNDrop")
+ option (HDF5_PACK_MACOSX_DMG "Package the HDF5 Library using DragNDrop" OFF)
+ if (HDF5_PACK_MACOSX_DMG)
+ list (APPEND CPACK_GENERATOR "DragNDrop")
+ endif ()
set (CPACK_COMPONENTS_ALL_IN_ONE_PACKAGE ON)
set (CPACK_PACKAGING_INSTALL_PREFIX "/${CPACK_PACKAGE_INSTALL_DIRECTORY}")
set (CPACK_PACKAGE_ICON "${HDF_RESOURCES_DIR}/hdf.icns")