[svn-r764] Changes since 19981014

----------------------

./bin/trace
./src/H5.c
./src/H5F.c
./src/H5Fprivate.h
./src/H5Fpublic.h
	Added a `scope' argument to H5Fflush() which should be either
	H5F_SCOPE_LOCAL or H5F_SCOPE_GLOBAL and determines which files
	are flushed (just the specified file or the entire virtual
	file).

./src/H5F.c
	Added reference counts to the H5F_t struct so we get the
	correct behavior between H5Funmount() and H5Fclose().

./src/H5O.c
	Fixed a memory leak that happens during error handling.

./test/cmpd_dset.c
./test/unlink.c
	Fixed a memory leak.

./test/mount.c
	Enabled the H5Fclose() test.

11 files changed, 369 insertions, 234 deletions

diff --git a/bin/trace b/bin/trace
index d8f6454..67ca384 100755
--- a/bin/trace
+++ b/bin/trace
@@ -22,6 +22,7 @@ $Source = "";
                "H5E_direction_t"           => "Ed",
                "H5E_error_t*"              => "Ee",
 	       "H5F_driver_t"              => "Fd",
+	       "H5F_scope_t"               => "Fs",
                "H5G_link_t"                => "Gl",
                "H5G_stat_t*"               => "Gs",
                "hsize_t"                   => "h",
diff --git a/src/.distdep b/src/.distdep
index d76c013..6571d93 100644
--- a/src/.distdep
+++ b/src/.distdep
@@ -93,6 +93,44 @@ H5B.o: \
    H5MFprivate.h \
    H5MFpublic.h \
    H5MMprivate.h
+H5D.o: \
+   H5D.c \
+   H5private.h \
+   H5public.h \
+   H5config.h \
+   H5Iprivate.h \
+   H5Ipublic.h \
+   H5ACprivate.h \
+   H5ACpublic.h \
+   H5Fprivate.h \
+   H5Fpublic.h \
+   H5Dpublic.h \
+   H5Dprivate.h \
+   H5Gprivate.h \
+   H5Gpublic.h \
+   H5Bprivate.h \
+   H5Bpublic.h \
+   H5Oprivate.h \
+   H5Opublic.h \
+   H5HGprivate.h \
+   H5HGpublic.h \
+   H5Tprivate.h \
+   H5Tpublic.h \
+   H5Sprivate.h \
+   H5Spublic.h \
+   H5Zprivate.h \
+   H5Zpublic.h \
+   H5Eprivate.h \
+   H5Epublic.h \
+   H5HLprivate.h \
+   H5HLpublic.h \
+   H5MFprivate.h \
+   H5MFpublic.h \
+   H5MMprivate.h \
+   H5MMpublic.h \
+   H5Pprivate.h \
+   H5Ppublic.h \
+   H5TBprivate.h
 H5E.o: \
    H5E.c \
    H5private.h \
@@ -101,6 +139,39 @@ H5E.o: \
    H5Iprivate.h \
    H5Ipublic.h \
    H5Eprivate.h
+H5F.o: \
+   H5F.c \
+   H5private.h \
+   H5public.h \
+   H5config.h \
+   H5Aprivate.h \
+   H5Apublic.h \
+   H5Ipublic.h \
+   H5Gprivate.h \
+   H5Gpublic.h \
+   H5Bprivate.h \
+   H5Bpublic.h \
+   H5Fprivate.h \
+   H5Fpublic.h \
+   H5Dpublic.h \
+   H5Dprivate.h \
+   H5Oprivate.h \
+   H5Opublic.h \
+   H5HGprivate.h \
+   H5HGpublic.h \
+   H5Tprivate.h \
+   H5Tpublic.h \
+   H5Sprivate.h \
+   H5Spublic.h \
+   H5Zprivate.h \
+   H5Zpublic.h \
+   H5Iprivate.h \
+   H5ACprivate.h \
+   H5ACpublic.h \
+   H5Eprivate.h \
+   H5Epublic.h \
+   H5MMprivate.h \
+   H5MMpublic.h
 H5Farray.o: \
    H5Farray.c \
    H5private.h \
@@ -253,6 +324,39 @@ H5Fstdio.o: \
    H5Dpublic.h \
    H5MMprivate.h \
    H5MMpublic.h
+H5G.o: \
+   H5G.c \
+   H5private.h \
+   H5public.h \
+   H5config.h \
+   H5Aprivate.h \
+   H5Apublic.h \
+   H5Ipublic.h \
+   H5Gprivate.h \
+   H5Gpublic.h \
+   H5Bprivate.h \
+   H5Bpublic.h \
+   H5Fprivate.h \
+   H5Fpublic.h \
+   H5Dpublic.h \
+   H5Dprivate.h \
+   H5Oprivate.h \
+   H5Opublic.h \
+   H5HGprivate.h \
+   H5HGpublic.h \
+   H5Tprivate.h \
+   H5Tpublic.h \
+   H5Sprivate.h \
+   H5Spublic.h \
+   H5Zprivate.h \
+   H5Zpublic.h \
+   H5Eprivate.h \
+   H5Epublic.h \
+   H5Gpkg.h \
+   H5ACprivate.h \
+   H5ACpublic.h \
+   H5HLprivate.h \
+   H5HLpublic.h
 H5Gent.o: \
    H5Gent.c \
    H5private.h \
@@ -753,6 +857,34 @@ H5P.o: \
    H5Eprivate.h \
    H5Epublic.h \
    H5MMprivate.h
+H5R.o: \
+   H5R.c \
+   H5private.h \
+   H5public.h \
+   H5config.h \
+   H5Iprivate.h \
+   H5Ipublic.h \
+   H5Dprivate.h \
+   H5Dpublic.h \
+   H5Fprivate.h \
+   H5Fpublic.h \
+   H5Gprivate.h \
+   H5Gpublic.h \
+   H5Bprivate.h \
+   H5Bpublic.h \
+   H5Oprivate.h \
+   H5Opublic.h \
+   H5HGprivate.h \
+   H5HGpublic.h \
+   H5Tprivate.h \
+   H5Tpublic.h \
+   H5Sprivate.h \
+   H5Spublic.h \
+   H5Zprivate.h \
+   H5Zpublic.h \
+   H5Eprivate.h \
+   H5Epublic.h \
+   H5Rprivate.h
 H5RA.o: \
    H5RA.c \
    H5RAprivate.h \
@@ -1079,135 +1211,3 @@ H5Z.o: \
    H5Spublic.h \
    H5Zprivate.h \
    H5Zpublic.h
-H5D.o: \
-   H5D.c \
-   H5private.h \
-   H5public.h \
-   H5config.h \
-   H5Iprivate.h \
-   H5Ipublic.h \
-   H5ACprivate.h \
-   H5ACpublic.h \
-   H5Fprivate.h \
-   H5Fpublic.h \
-   H5Dpublic.h \
-   H5Dprivate.h \
-   H5Gprivate.h \
-   H5Gpublic.h \
-   H5Bprivate.h \
-   H5Bpublic.h \
-   H5Oprivate.h \
-   H5Opublic.h \
-   H5HGprivate.h \
-   H5HGpublic.h \
-   H5Tprivate.h \
-   H5Tpublic.h \
-   H5Sprivate.h \
-   H5Spublic.h \
-   H5Zprivate.h \
-   H5Zpublic.h \
-   H5Eprivate.h \
-   H5Epublic.h \
-   H5HLprivate.h \
-   H5HLpublic.h \
-   H5MFprivate.h \
-   H5MFpublic.h \
-   H5MMprivate.h \
-   H5MMpublic.h \
-   H5Pprivate.h \
-   H5Ppublic.h \
-   H5TBprivate.h
-H5R.o: \
-   H5R.c \
-   H5private.h \
-   H5public.h \
-   H5config.h \
-   H5Iprivate.h \
-   H5Ipublic.h \
-   H5Dprivate.h \
-   H5Dpublic.h \
-   H5Fprivate.h \
-   H5Fpublic.h \
-   H5Gprivate.h \
-   H5Gpublic.h \
-   H5Bprivate.h \
-   H5Bpublic.h \
-   H5Oprivate.h \
-   H5Opublic.h \
-   H5HGprivate.h \
-   H5HGpublic.h \
-   H5Tprivate.h \
-   H5Tpublic.h \
-   H5Sprivate.h \
-   H5Spublic.h \
-   H5Zprivate.h \
-   H5Zpublic.h \
-   H5Eprivate.h \
-   H5Epublic.h \
-   H5Rprivate.h
-H5F.o: \
-   H5F.c \
-   H5private.h \
-   H5public.h \
-   H5config.h \
-   H5Aprivate.h \
-   H5Apublic.h \
-   H5Ipublic.h \
-   H5Gprivate.h \
-   H5Gpublic.h \
-   H5Bprivate.h \
-   H5Bpublic.h \
-   H5Fprivate.h \
-   H5Fpublic.h \
-   H5Dpublic.h \
-   H5Dprivate.h \
-   H5Oprivate.h \
-   H5Opublic.h \
-   H5HGprivate.h \
-   H5HGpublic.h \
-   H5Tprivate.h \
-   H5Tpublic.h \
-   H5Sprivate.h \
-   H5Spublic.h \
-   H5Zprivate.h \
-   H5Zpublic.h \
-   H5Iprivate.h \
-   H5ACprivate.h \
-   H5ACpublic.h \
-   H5Eprivate.h \
-   H5Epublic.h \
-   H5MMprivate.h \
-   H5MMpublic.h
-H5G.o: \
-   H5G.c \
-   H5private.h \
-   H5public.h \
-   H5config.h \
-   H5Aprivate.h \
-   H5Apublic.h \
-   H5Ipublic.h \
-   H5Gprivate.h \
-   H5Gpublic.h \
-   H5Bprivate.h \
-   H5Bpublic.h \
-   H5Fprivate.h \
-   H5Fpublic.h \
-   H5Dpublic.h \
-   H5Dprivate.h \
-   H5Oprivate.h \
-   H5Opublic.h \
-   H5HGprivate.h \
-   H5HGpublic.h \
-   H5Tprivate.h \
-   H5Tpublic.h \
-   H5Sprivate.h \
-   H5Spublic.h \
-   H5Zprivate.h \
-   H5Zpublic.h \
-   H5Eprivate.h \
-   H5Epublic.h \
-   H5Gpkg.h \
-   H5ACprivate.h \
-   H5ACpublic.h \
-   H5HLprivate.h \
-   H5HLpublic.h
diff --git a/src/H5.c b/src/H5.c
index 3fc25d7..f0de26e 100644
--- a/src/H5.c
+++ b/src/H5.c
@@ -1404,6 +1404,30 @@ H5_trace (hbool_t returning, const char *func, const char *type, ...)
 		}
 		break;
 
+	    case 's':
+		if (ptr) {
+		    if (vp) {
+			fprintf(out, "0x%lx", (unsigned long)vp);
+		    } else {
+			fprintf(out, "NULL");
+		    }
+		} else {
+		    H5F_scope_t scope = va_arg(ap, H5F_scope_t);
+		    switch (scope) {
+		    case H5F_SCOPE_LOCAL:
+			fprintf(out, "H5F_SCOPE_LOCAL");
+			break;
+		    case H5F_SCOPE_GLOBAL:
+			fprintf(out, "H5F_SCOPE_GLOBAL");
+			break;
+		    case H5F_SCOPE_DOWN:
+			fprintf(out, "H5F_SCOPE_DOWN "
+				"/*FOR INTERNAL USE ONLY!*/");
+			break;
+		    }
+		}
+		break;
+
 	    default:
 		fprintf(out, "BADTYPE(F%c)", type[1]);
 		goto error;
diff --git a/src/H5F.c b/src/H5F.c
index ac5d2fd..b50614d 100644
--- a/src/H5F.c
+++ b/src/H5F.c
@@ -110,7 +110,7 @@ static void H5F_term_interface(void);
 static H5F_t *H5F_new(H5F_file_t *shared, const H5F_create_t *fcpl,
 		      const H5F_access_t *fapl);
 static herr_t H5F_dest(H5F_t *f);
-static herr_t H5F_flush(H5F_t *f, hbool_t invalidate);
+static herr_t H5F_flush(H5F_t *f, H5F_scope_t scope, hbool_t invalidate);
 static herr_t H5F_locate_signature(H5F_low_t *f_handle,
 				   const H5F_access_t *access_parms,
 				   haddr_t *addr/*out*/);
@@ -583,6 +583,7 @@ H5F_new(H5F_file_t *shared, const H5F_create_t *fcpl, const H5F_access_t *fapl)
 	H5F_istore_init (f);
     }
     f->shared->nrefs++;
+    f->nrefs = 1;
     ret_value = f;
 
  done:
@@ -613,6 +614,10 @@ H5F_new(H5F_file_t *shared, const H5F_create_t *fcpl, const H5F_access_t *fapl)
  *
  * Modifications:
  *
+ * 	Robb Matzke, 1998-10-14
+ *	Nothing happens unless the reference count for the H5F_t goes to
+ *	zero.  The reference counts are decremented here.
+ *
  *-------------------------------------------------------------------------
  */
 static herr_t
@@ -622,8 +627,8 @@ H5F_dest(H5F_t *f)
     
     FUNC_ENTER(H5F_dest, FAIL);
 
-    if (f) {
-	if (0 == --(f->shared->nrefs)) {
+    if (f && 0 == --f->nrefs) {
+	if (0 == --f->shared->nrefs) {
 	    /*
 	     * Do not close the root group since we didn't count it, but free
 	     * the memory associated with it.
@@ -644,6 +649,8 @@ H5F_dest(H5F_t *f)
 	    f->shared = H5MM_xfree(f->shared);
 	}
 	f->name = H5MM_xfree(f->name);
+	f->mtab.child = H5MM_xfree(f->mtab.child);
+	f->mtab.nalloc = 0;
 	H5MM_xfree(f);
     }
     FUNC_LEAVE(ret_value);
@@ -935,7 +942,7 @@ H5F_open(const char *name, uintn flags,
 	f->shared->base_addr = f->shared->boot_addr;
 
 	f->shared->consist_flags = 0x03;
-	if (H5F_flush(f, FALSE) < 0) {
+	if (H5F_flush(f, H5F_SCOPE_LOCAL, FALSE) < 0) {
 	    HGOTO_ERROR(H5E_FILE, H5E_CANTINIT, NULL,
 			"unable to write file boot block");
 	}
@@ -1133,8 +1140,9 @@ H5F_open(const char *name, uintn flags,
  * Modifications:
  * 
  * 	Robb Matzke, 18 Jul 1997
- *	File struct creation and destruction is through H5F_new() H5F_dest().
- *	Writing the root symbol table entry is done with H5G_encode().
+ *	File struct creation and destruction is through H5F_new() and
+ *	H5F_dest(). Writing the root symbol table entry is done with
+ *	H5G_encode().
  *	
  *  	Robb Matzke, 29 Aug 1997
  *	Moved creation of the boot block to H5F_flush().
@@ -1251,8 +1259,9 @@ H5Fcreate(const char *filename, unsigned flags, hid_t create_id,
  * Modifications:
  * 
  *  	Robb Matzke, 18 Jul 1997
- *	File struct creation and destruction is through H5F_new() H5F_dest().
- *	Reading the root symbol table entry is done with H5G_decode().
+ *	File struct creation and destruction is through H5F_new() and
+ *	H5F_dest(). Reading the root symbol table entry is done with
+ *	H5G_decode().
  *	
  *  	Robb Matzke, 23 Sep 1997
  *	Most of the work is now done by H5F_open() since H5Fcreate() and
@@ -1331,10 +1340,13 @@ H5Fopen(const char *filename, unsigned flags, hid_t access_id)
  *
  * Modifications:
  *
+ * 		Robb Matzke, 1998-10-16
+ *		Added the `scope' argument.
+ *
  *-------------------------------------------------------------------------
  */
 herr_t
-H5Fflush(hid_t object_id)
+H5Fflush(hid_t object_id, H5F_scope_t scope)
 {
     H5F_t	*f = NULL;
     H5G_t	*grp = NULL;
@@ -1344,7 +1356,7 @@ H5Fflush(hid_t object_id)
     H5G_entry_t	*ent = NULL;
     
     FUNC_ENTER(H5Fflush, FAIL);
-    H5TRACE1("e","i",object_id);
+    H5TRACE2("e","iFs",object_id,scope);
 
     switch (H5I_get_type(object_id)) {
     case H5I_FILE:
@@ -1404,7 +1416,7 @@ H5Fflush(hid_t object_id)
     }
 
     /* Flush the file */
-    if (H5F_flush(f, FALSE)<0) {
+    if (H5F_flush(f, scope, FALSE)<0) {
 	HRETURN_ERROR(H5E_FILE, H5E_CANTINIT, FAIL,
 		      "flush failed");
     }
@@ -1435,16 +1447,25 @@ H5Fflush(hid_t object_id)
  * Modifications:
  *              rky 980828 Only p0 writes metadata to disk.
  *
+ * 		Robb Matzke, 1998-10-16
+ *		Added the `scope' argument to indicate what should be
+ *		flushed. If the value is H5F_SCOPE_GLOBAL then the entire
+ *		virtual file is flushed; a value of H5F_SCOPE_LOCAL means
+ *		that only the specified file is flushed.  A value of
+ *		H5F_SCOPE_DOWN means flush the specified file and all
+ *		children.
+ *
  *-------------------------------------------------------------------------
  */
 static herr_t
-H5F_flush(H5F_t *f, hbool_t invalidate)
+H5F_flush(H5F_t *f, H5F_scope_t scope, hbool_t invalidate)
 {
     uint8		buf[2048], *p = buf;
     haddr_t		reserved_addr;
+    uintn		nerrors=0, i;
     
     FUNC_ENTER(H5F_flush, FAIL);
-
+	
     /*
      * Nothing to do if the file is read only.	This determination is made at
      * the shared open(2) flags level, implying that opening a file twice,
@@ -1455,6 +1476,19 @@ H5F_flush(H5F_t *f, hbool_t invalidate)
 	HRETURN(SUCCEED);
     }
 
+    /* Flush other stuff depending on scope */
+    if (H5F_SCOPE_GLOBAL==scope) {
+	while (f->mtab.parent) f = f->mtab.parent;
+	scope = H5F_SCOPE_DOWN;
+    }
+    if (H5F_SCOPE_DOWN==scope) {
+	for (i=0; i<f->mtab.nmounts; i++) {
+	    if (H5F_flush(f->mtab.child[i].file, scope, invalidate)<0) {
+		nerrors++;
+	    }
+	}
+    }
+
     /* flush the entire raw data cache */
     if (H5F_istore_flush (f, invalidate)<0) {
 	HRETURN_ERROR(H5E_CACHE, H5E_CANTFLUSH, FAIL,
@@ -1512,6 +1546,9 @@ H5F_flush(H5F_t *f, hbool_t invalidate)
     if (H5F_low_flush(f->shared->lf, f->shared->access_parms) < 0) {
 	HRETURN_ERROR(H5E_IO, H5E_WRITEERROR, FAIL, "low level flush failed");
     }
+
+    /* Check flush errors for children - errors are already on the stack */
+    if (nerrors) HRETURN(FAIL);
     FUNC_LEAVE(SUCCEED);
 }
 
@@ -1519,7 +1556,9 @@ H5F_flush(H5F_t *f, hbool_t invalidate)
 /*-------------------------------------------------------------------------
  * Function:	H5F_close
  *
- * Purpose:	Closes an open HDF5 file.
+ * Purpose:	Closes an open HDF5 file.  From the API this function gets
+ *		called when a file hid_t reference count gets to zero as a
+ *		result of calling H5Fclose().
  *
  * Return:	Success:	SUCCEED
  *
@@ -1530,6 +1569,11 @@ H5F_flush(H5F_t *f, hbool_t invalidate)
  *
  * Modifications:
  *
+ * 	Robb Matzke, 1998-10-14
+ *	Nothing happens unless the H5F_t reference count is one (the
+ *	file is flushed anyway).  The reference count is decremented by
+ *	H5F_dest().
+ *
  *-------------------------------------------------------------------------
  */
 herr_t
@@ -1540,13 +1584,25 @@ H5F_close(H5F_t *f)
     FUNC_ENTER(H5F_close, FAIL);
 
     /*
-     * Find the root of the virtual file. Then unmount and close each child
-     * before closing the current file.
+     * If the reference count is positive then just decrement the count and
+     * flush the file.
      */
-    while (f->mtab.parent) f = f->mtab.parent;
+    if (f->nrefs>1) {
+	if (H5F_flush(f, H5F_SCOPE_LOCAL, FALSE)<0) {
+	    HRETURN_ERROR(H5E_CACHE, H5E_CANTFLUSH, FAIL,
+			  "unable to flush cache");
+	}
+	H5F_dest(f); /*decrement reference counts*/
+	HRETURN(SUCCEED);
+    }
+    
+    /*
+     * Unmount and close each child before closing the current file.
+     */
+    assert(NULL==f->mtab.parent);
     for (i=0; i<f->mtab.nmounts; i++) {
-	H5G_close(f->mtab.child[i].group);
 	f->mtab.child[i].file->mtab.parent = NULL;
+	H5G_close(f->mtab.child[i].group);
 	H5F_close(f->mtab.child[i].file);
     }
     f->mtab.nmounts = 0;
@@ -1558,7 +1614,7 @@ H5F_close(H5F_t *f)
      * problem.
      */
     if (f->nopen_objs>0) {
-	if (H5F_flush(f, FALSE)<0) {
+	if (H5F_flush(f, H5F_SCOPE_LOCAL, FALSE)<0) {
 	    HRETURN_ERROR(H5E_CACHE, H5E_CANTFLUSH, FAIL,
 			  "unable to flush cache");
 	}
@@ -1586,9 +1642,9 @@ H5F_close(H5F_t *f)
      * If this is the last reference to the shared part of the file then
      * close it also.
      */
-    if (1==f->shared->nrefs) {
+    if (1==f->nrefs && 1==f->shared->nrefs) {
 	/* Flush and destroy all caches */
-	if (H5F_flush (f, TRUE)<0) {
+	if (H5F_flush (f, H5F_SCOPE_LOCAL, TRUE)<0) {
 	    HRETURN_ERROR (H5E_CACHE, H5E_CANTFLUSH, FAIL,
 			   "unable to flush cache");
 	}
@@ -1605,7 +1661,7 @@ H5F_close(H5F_t *f)
 	 * this file are closed the flush isn't really necessary, but lets
 	 * just be safe.
 	 */
-	if (H5F_flush(f, TRUE)<0) {
+	if (H5F_flush(f, H5F_SCOPE_LOCAL, TRUE)<0) {
 	    HRETURN_ERROR(H5E_CACHE, H5E_CANTFLUSH, FAIL,
 			  "unable to flush cache");
 	}
@@ -1697,6 +1753,9 @@ H5Fclose(hid_t file_id)
  *
  * Modifications:
  *
+ * 	Robb Matzke, 1998-10-14
+ *	The reference count for the mounted H5F_t is incremented.
+ *
  *-------------------------------------------------------------------------
  */
 static herr_t
@@ -1781,6 +1840,7 @@ H5F_mount(H5G_entry_t *loc, const char *name, H5F_t *child,
     parent->mtab.child[md].group = mount_point;
     parent->mtab.child[md].file = child;
     child->mtab.parent = parent;
+    child->nrefs++;
     ret_value = SUCCEED;
 
  done:
@@ -1811,6 +1871,9 @@ H5F_mount(H5G_entry_t *loc, const char *name, H5F_t *child,
  *
  * Modifications:
  *
+ * 	Robb Matzke, 1998-10-14
+ *	The ref count for the child is decremented by calling H5F_close().
+ *
  *-------------------------------------------------------------------------
  */
 static herr_t
@@ -1854,6 +1917,7 @@ H5F_unmount(H5G_entry_t *loc, const char *name)
 		parent->mtab.nmounts -= 1;
 		H5G_close(parent->mtab.child[i].group);
 		child->mtab.parent = NULL;
+		H5F_close(child);
 		HDmemmove(parent->mtab.child+i,
 			  parent->mtab.child+i+1,
 			  ((parent->mtab.nmounts-i)*
@@ -1890,6 +1954,7 @@ H5F_unmount(H5G_entry_t *loc, const char *name)
 	parent->mtab.nmounts -= 1;
 	H5G_close(parent->mtab.child[md].group);
 	parent->mtab.child[md].file->mtab.parent = NULL;
+	H5F_close(parent->mtab.child[md].file);
 	HDmemmove(parent->mtab.child+md,
 		  parent->mtab.child+md+1,
 		  (parent->mtab.nmounts-md)*sizeof(parent->mtab.child[0]));
diff --git a/src/H5Fprivate.h b/src/H5Fprivate.h
index 004c411..4b42665 100644
--- a/src/H5Fprivate.h
+++ b/src/H5Fprivate.h
@@ -476,6 +476,7 @@ typedef struct H5F_file_t {
  * pointers to shared H5F_file_t structs.
  */
 typedef struct H5F_t {
+    uintn		nrefs;		/* Reference count		*/
     uintn		intent;		/* The flags passed to H5F_open()*/
     char		*name;		/* Name used to open file	*/
     H5F_file_t		*shared;	/* The shared file info		*/
@@ -490,9 +491,11 @@ typedef struct H5F_t {
     : H5F_SIZEOF_ADDR(f)==2 ? UINT16ENCODE(p,o) \
     : H5FPencode_unusual_offset(f,&(p),(uint8 *)&(o)))
 #else /* NOT_YET */
-#define H5F_ENCODE_OFFSET(f,p,o) switch(H5F_SIZEOF_ADDR(f)) { case 4: UINT32ENCODE(p,o); break;\
-    case 8: UINT64ENCODE(p,o); break;\
-    case 2: UINT16ENCODE(p,o); break;}
+#define H5F_ENCODE_OFFSET(f,p,o) switch(H5F_SIZEOF_ADDR(f)) {		      \
+    case 4: UINT32ENCODE(p,o); break;					      \
+    case 8: UINT64ENCODE(p,o); break;					      \
+    case 2: UINT16ENCODE(p,o); break;					      \
+}
 #endif /* NOT_YET */
 
 #define H5F_DECODE_OFFSET(f,p,o)					      \
diff --git a/src/H5Fpublic.h b/src/H5Fpublic.h
index 319eeeb..6a81d52 100644
--- a/src/H5Fpublic.h
+++ b/src/H5Fpublic.h
@@ -69,6 +69,12 @@ typedef enum H5F_driver_t {
     H5F_LOW_FAMILY	= 5 	/*split addr space over many files	*/
 } H5F_driver_t;
 
+typedef enum H5F_scope_t {
+    H5F_SCOPE_LOCAL	= 0,	/*specified file handle only		*/
+    H5F_SCOPE_GLOBAL	= 1,	/*entire virtual file			*/
+    H5F_SCOPE_DOWN      = 2	/*for internal use only			*/
+} H5F_scope_t;
+
 /* Unlimited file size for H5Pset_external() */
 #define H5F_UNLIMITED	((hsize_t)(-1L))
 
@@ -81,7 +87,7 @@ hbool_t H5Fis_hdf5 (const char *filename);
 hid_t H5Fcreate (const char *filename, unsigned flags, hid_t create_plist,
                  hid_t access_plist);
 hid_t H5Fopen (const char *filename, unsigned flags, hid_t access_plist);
-herr_t H5Fflush(hid_t object_id);
+herr_t H5Fflush(hid_t object_id, H5F_scope_t scope);
 herr_t H5Fclose (hid_t file_id);
 hid_t H5Fget_create_plist (hid_t file_id);
 hid_t H5Fget_access_plist (hid_t file_id);
diff --git a/src/H5O.c b/src/H5O.c
index 4386962..0902b1c 100644
--- a/src/H5O.c
+++ b/src/H5O.c
@@ -1189,7 +1189,6 @@ H5O_modify(H5G_entry_t *ent, const H5O_class_t *type, intn overwrite,
 		 */
 		H5E_clear ();
 		flags &= ~H5O_FLAG_SHARED;
-		H5MM_xfree (sh_mesg);
 	    } else if (sh_mesg->in_gh) {
 		/*
 		 * The shared message is stored in the global heap.
@@ -1245,6 +1244,7 @@ H5O_modify(H5G_entry_t *ent, const H5O_class_t *type, intn overwrite,
     /* Copy the native value into the object header */
     if (flags & H5O_FLAG_SHARED) {
 	oh->mesg[idx].native = sh_mesg;
+	sh_mesg = NULL;
     } else {
 	if (oh->mesg[idx].native) {
 	    H5O_reset (oh->mesg[idx].type, oh->mesg[idx].native);
@@ -1265,6 +1265,7 @@ H5O_modify(H5G_entry_t *ent, const H5O_class_t *type, intn overwrite,
     ret_value = sequence;
 
   done:
+    H5MM_xfree(sh_mesg);
     if (oh && H5AC_unprotect(ent->file, H5AC_OHDR, &(ent->header), oh) < 0) {
 	HRETURN_ERROR(H5E_OHDR, H5E_PROTECT, FAIL,
 		      "unable to release object header");
diff --git a/test/.distdep b/test/.distdep
index 915513d..25cfd63 100644
--- a/test/.distdep
+++ b/test/.distdep
@@ -103,6 +103,32 @@ tohdr.o: \
    ../src/H5Tprivate.h \
    ../src/H5Tpublic.h \
    ../src/H5Sprivate.h
+trefer.o: \
+   trefer.c \
+   testhdf5.h \
+   ../src/H5private.h \
+   ../src/H5public.h \
+   ../src/H5config.h \
+   ../src/H5Eprivate.h \
+   ../src/H5Epublic.h \
+   ../src/H5Ipublic.h \
+   ../src/hdf5.h \
+   ../src/H5Apublic.h \
+   ../src/H5ACpublic.h \
+   ../src/H5Bpublic.h \
+   ../src/H5Dpublic.h \
+   ../src/H5Fpublic.h \
+   ../src/H5Gpublic.h \
+   ../src/H5HGpublic.h \
+   ../src/H5HLpublic.h \
+   ../src/H5MFpublic.h \
+   ../src/H5MMpublic.h \
+   ../src/H5Opublic.h \
+   ../src/H5Ppublic.h \
+   ../src/H5Zpublic.h \
+   ../src/H5Rpublic.h \
+   ../src/H5RApublic.h \
+   ../src/H5Spublic.h
 tselect.o: \
    tselect.c \
    testhdf5.h \
@@ -129,6 +155,35 @@ tselect.o: \
    ../src/H5Rpublic.h \
    ../src/H5RApublic.h \
    ../src/H5Spublic.h
+tstab.o: \
+   tstab.c \
+   testhdf5.h \
+   ../src/H5private.h \
+   ../src/H5public.h \
+   ../src/H5config.h \
+   ../src/H5Eprivate.h \
+   ../src/H5Epublic.h \
+   ../src/H5Ipublic.h \
+   ../src/H5Iprivate.h \
+   ../src/H5ACprivate.h \
+   ../src/H5ACpublic.h \
+   ../src/H5Fprivate.h \
+   ../src/H5Fpublic.h \
+   ../src/H5Dpublic.h \
+   ../src/H5Pprivate.h \
+   ../src/H5Ppublic.h \
+   ../src/H5Zpublic.h \
+   ../src/H5Gprivate.h \
+   ../src/H5Gpublic.h \
+   ../src/H5Bprivate.h \
+   ../src/H5Bpublic.h \
+   ../src/H5Oprivate.h \
+   ../src/H5Opublic.h \
+   ../src/H5HGprivate.h \
+   ../src/H5HGpublic.h \
+   ../src/H5Tprivate.h \
+   ../src/H5Tpublic.h \
+   ../src/H5Sprivate.h
 th5s.o: \
    th5s.c \
    testhdf5.h \
@@ -191,6 +246,34 @@ hyperslab.o: \
    ../src/H5config.h \
    ../src/H5MMprivate.h \
    ../src/H5MMpublic.h
+istore.o: \
+   istore.c \
+   ../src/H5private.h \
+   ../src/H5public.h \
+   ../src/H5config.h \
+   ../src/H5Dprivate.h \
+   ../src/H5Dpublic.h \
+   ../src/H5Ipublic.h \
+   ../src/H5Fprivate.h \
+   ../src/H5Fpublic.h \
+   ../src/H5Gprivate.h \
+   ../src/H5Gpublic.h \
+   ../src/H5Bprivate.h \
+   ../src/H5Bpublic.h \
+   ../src/H5Oprivate.h \
+   ../src/H5Opublic.h \
+   ../src/H5HGprivate.h \
+   ../src/H5HGpublic.h \
+   ../src/H5Tprivate.h \
+   ../src/H5Tpublic.h \
+   ../src/H5Sprivate.h \
+   ../src/H5Spublic.h \
+   ../src/H5Zprivate.h \
+   ../src/H5Zpublic.h \
+   ../src/H5Iprivate.h \
+   ../src/H5Pprivate.h \
+   ../src/H5Ppublic.h \
+   ../src/H5MMprivate.h
 dsets.o: \
    dsets.c \
    ../src/hdf5.h \
@@ -563,77 +646,17 @@ fillval.o: \
    ../src/H5RApublic.h \
    ../src/H5Spublic.h \
    ../src/H5Tpublic.h
-tstab.o: \
-   tstab.c \
-   testhdf5.h \
-   ../src/H5private.h \
-   ../src/H5public.h \
-   ../src/H5config.h \
-   ../src/H5Eprivate.h \
-   ../src/H5Epublic.h \
-   ../src/H5Ipublic.h \
-   ../src/H5Iprivate.h \
-   ../src/H5ACprivate.h \
-   ../src/H5ACpublic.h \
-   ../src/H5Fprivate.h \
-   ../src/H5Fpublic.h \
-   ../src/H5Dpublic.h \
-   ../src/H5Pprivate.h \
-   ../src/H5Ppublic.h \
-   ../src/H5Zpublic.h \
-   ../src/H5Gprivate.h \
-   ../src/H5Gpublic.h \
-   ../src/H5Bprivate.h \
-   ../src/H5Bpublic.h \
-   ../src/H5Oprivate.h \
-   ../src/H5Opublic.h \
-   ../src/H5HGprivate.h \
-   ../src/H5HGpublic.h \
-   ../src/H5Tprivate.h \
-   ../src/H5Tpublic.h \
-   ../src/H5Sprivate.h
-istore.o: \
-   istore.c \
-   ../src/H5private.h \
-   ../src/H5public.h \
-   ../src/H5config.h \
-   ../src/H5Dprivate.h \
-   ../src/H5Dpublic.h \
-   ../src/H5Ipublic.h \
-   ../src/H5Fprivate.h \
-   ../src/H5Fpublic.h \
-   ../src/H5Gprivate.h \
-   ../src/H5Gpublic.h \
-   ../src/H5Bprivate.h \
-   ../src/H5Bpublic.h \
-   ../src/H5Oprivate.h \
-   ../src/H5Opublic.h \
-   ../src/H5HGprivate.h \
-   ../src/H5HGpublic.h \
-   ../src/H5Tprivate.h \
-   ../src/H5Tpublic.h \
-   ../src/H5Sprivate.h \
-   ../src/H5Spublic.h \
-   ../src/H5Zprivate.h \
-   ../src/H5Zpublic.h \
-   ../src/H5Iprivate.h \
-   ../src/H5Pprivate.h \
-   ../src/H5Ppublic.h \
-   ../src/H5MMprivate.h
-trefer.o: \
-   trefer.c \
-   testhdf5.h \
-   ../src/H5private.h \
+mount.o: \
+   mount.c \
+   ../src/hdf5.h \
    ../src/H5public.h \
    ../src/H5config.h \
-   ../src/H5Eprivate.h \
-   ../src/H5Epublic.h \
    ../src/H5Ipublic.h \
-   ../src/hdf5.h \
    ../src/H5Apublic.h \
    ../src/H5ACpublic.h \
    ../src/H5Bpublic.h \
    ../src/H5Dpublic.h \
+   ../src/H5Epublic.h \
    ../src/H5Fpublic.h \
    ../src/H5Gpublic.h \
    ../src/H5HGpublic.h \
@@ -644,5 +667,4 @@ trefer.o: \
    ../src/H5Ppublic.h \
    ../src/H5Zpublic.h \
    ../src/H5Rpublic.h \
-   ../src/H5RApublic.h \
-   ../src/H5Spublic.h
+   ../src/H5RApublic.h
diff --git a/test/cmpd_dset.c b/test/cmpd_dset.c
index 94255a4..534f3d6 100644
--- a/test/cmpd_dset.c
+++ b/test/cmpd_dset.c
@@ -742,7 +742,6 @@ main (void)
 	    }
 	}
     }
-    free(s11);
     puts(" PASSED");
 
     
diff --git a/test/mount.c b/test/mount.c
index 516eba8..e5d37ad 100644
--- a/test/mount.c
+++ b/test/mount.c
@@ -986,11 +986,6 @@ test_close(void)
     
     printf("%-70s", "Testing file handle close");
     fflush(stdout);
-#if 1
-    puts("   SKIP");
-    puts("   Skipped for now (until H5F_t refcounts are implemented)...");
-    return 0;
-#endif
     
     /* Build the virtual file */
     if ((file1=H5Fopen(FILE_NAME_1, H5F_ACC_RDWR, H5P_DEFAULT))<0 ||
@@ -998,16 +993,34 @@ test_close(void)
 	goto error;
     if (H5Fmount(file1, "/mnt1", file2, H5P_DEFAULT)<0) goto error;
 
-    /* Close by file1 */
+    /*
+     * Close file1 unmounting it from the virtual file.  Objects in file2 are
+     * still accessible through the file2 handle, but nothing in file1 is
+     * accessible.
+     */
     if (H5Fclose(file1)<0) goto error;
     H5E_BEGIN_TRY {
-	status = H5Fclose(file2);
+	status = H5Gget_objinfo(file2, "/mnt1", TRUE, NULL);
     } H5E_END_TRY;
     if (status>=0) {
 	puts("*FAILED*");
-	puts("   File close should have closed all virtual file members!");
+	puts("   File1 contents are still accessible!");
 	goto error;
     }
+    if (H5Fclose(file2)<0) goto error;
+
+    /* Build the virtual file again */
+    if ((file1=H5Fopen(FILE_NAME_1, H5F_ACC_RDWR, H5P_DEFAULT))<0 ||
+	(file2=H5Fopen(FILE_NAME_2, H5F_ACC_RDWR, H5P_DEFAULT))<0)
+	goto error;
+    if (H5Fmount(file1, "/mnt1", file2, H5P_DEFAULT)<0) goto error;
+
+    /*
+     * Close file2.  It is not actually closed because it's a child of file1.
+     */    
+    if (H5Fclose(file2)<0) goto error;
+    if (H5Gget_objinfo(file1, "/mnt1/file2", TRUE, NULL)<0) goto error;
+    if (H5Fclose(file1)<0) goto error;
     
     /* Shut down */
     puts(" PASSED");
diff --git a/test/unlink.c b/test/unlink.c
index 2340777..a3ec4a2 100644
--- a/test/unlink.c
+++ b/test/unlink.c
@@ -165,6 +165,7 @@ test_many(hid_t file)
     /* Create a test group */
     if ((work=H5Gcreate(file, "/test_many", 0))<0) goto error;
     if ((grp = H5Gcreate(work, "/test_many_foo", 0))<0) goto error;
+    if (H5Gclose(grp)<0) goto error;
 
     /* Create a bunch of names and unlink them in order */
     printf("%-70s", "Testing forward unlink");