Remove unused files (#3276)

6 files changed, 0 insertions, 559 deletions

diff --git a/bin/README.md b/bin/README.md
index 856f348..e2e2570 100644
--- a/bin/README.md
+++ b/bin/README.md
@@ -6,7 +6,6 @@ Programs run via `autogen.sh` (or the equivalent in CMake) are indicated.
 |-------|-------|
 |`buildhdf5`|Convenience script to build HDF5 using the Autotools|
 |`checkapi`|Checks if public API calls are used in internal functions|
-|`checkposix`|Checks if C/POSIX calls are prefixed with `HD`|
 |`chkcopyright`|Checks if files have appropriate copyright statements|
 |`cmakehdf5`|Convenience script to build HDF5 using CMake|
 |`debug-ohdr`|Examines debug output from `H5O_open/close` to look for open objects|
diff --git a/bin/checkposix b/bin/checkposix
deleted file mode 100755
index bb6b81b..0000000
--- a/bin/checkposix
+++ /dev/null
@@ -1,263 +0,0 @@
-#!/usr/bin/env perl
-require 5.003;
-use warnings;
-
-#
-# Copyright by The HDF Group.
-# All rights reserved.
-#
-# This file is part of HDF5.  The full HDF5 copyright notice, including
-# terms governing use, modification, and redistribution, is contained in
-# the COPYING file, which can be found at the root of the source code
-# distribution tree, or in https://www.hdfgroup.org/licenses.
-# If you do not have access to either file, you may request a copy from
-# help@hdfgroup.org.
-#
-# Dana Robinson
-# Spring 2019
-# (Original by Robb Matzke)
-#
-# Purpose:  Given the names of C source files this script will print the
-#           file name, line number, and function name of any function that
-#           doesn't begin with the letter 'h' or 'H' as stipulated by the
-#           HDF5 programming style guide.
-#
-#           Emacs users can run this script as the compile command and
-#           use 'next-error' (usually bound to M-`) to find each name
-#           violation.
-
-use File::Basename;
-
-# Loop over all files passed to the function
-foreach $arg (@ARGV) {
-
-    # Get the filename from the path
-    $filename = fileparse($arg);
-
-    # Skip files that don't include H5private.h
-    # H5system. has to be inspected by hand since it wraps POSIX files
-    #
-    # H5detect and H5make_libsettings are created before the library exists
-    # so calls that link to function replacements won't work. We'll ignore
-    # it here.
-    #
-    # If a user specifies one file, process it no matter what so people
-    # can inspect files we normally skip (like H5system.c).
-
-    $ignore = 0;
-
-    # Ignored files in src/
-    if($#ARGV gt 0 and $filename =~ /H5FDmulti|H5FDstdio|H5VLpassthru|H5system|H5detect|H5make_libsettings/) {
-        $ignore = 1;
-    }
-    # Ignored atomic test files in test/
-    if($#ARGV gt 0 and $filename =~ /atomic_reader|atomic_writer/) {
-        $ignore = 1;
-    }
-    # Ignored filter plugins in test/
-    if($#ARGV gt 0 and $filename =~ /^filter_plugin\d_/) {
-        $ignore = 1;
-    }
-    # Ignored generators in test/
-    if($#ARGV gt 0 and $filename =~ /^gen_/) {
-        $ignore = 1;
-    }
-
-    if($ignore) {
-        print "$filename is exempt from using Standard library macro wrappers\n";
-        next;
-    }
-
-    # Open the file
-    open(my $fh, "<", $arg) or do {
-        warn "NOTE: Unable to open $arg: !$\n";
-        next;
-    };
-
-    # Loop over all lines in the file to find undecorated functions
-    while (<$fh>) {
-
-        # Get rid of comments by removing the inside part.
-        s|/\*.*?\*/||g;
-        if ($in_comment) {
-            if (/\*\//) {
-                s|.*?\*/||;
-                $in_comment = 0;
-            } else {
-                $_="\n";
-            }
-        } elsif (m|/\*|) {
-            s|/\*.*||;
-            $in_comment = 1;
-        }
-
-        # Get rid of string constants if they begin and end on this line.
-        s/([\'\"])([^\1]|\\\1)*?\1/$1$1/g;
-
-        # Get rid of preprocessor directives
-        s/^\#.*//;
-
-        # Skip callbacks invoked as methods in a struct
-        next if $_ =~ /\b(\)?]?->|\.)\(?([a-z_A-Z]\w*)\s*\(/;
-
-        # Now find all function calls on this line which don't start with 'H'
-        while (($name)=/\b([a-z_A-GI-Z]\w*)\s*\(/) {
-            $_ = $';
-
-            # Ignore C statements that look sort of like function
-            # calls.
-            next if $name =~ /^(if|for|offsetof|return|sizeof|switch|while|void)$/;
-
-            # Ignore things that get misdetected because of the simplified
-            # parsing that takes place here.
-            next if $name =~ /^(int|herr_t|_term_interface|_term_package)$/;
-
-            # These are really HDF5 functions/macros even though they don't
-            # start with `h' or `H'.
-            next if $name =~ /^FUNC_(ENTER|LEAVE)(_(NO)?API|_PACKAGE|_STATIC)?(_NAMECHECK_ONLY|_NOFS|_NOCLEAR|_NOINIT|_NOPUSH)?(_NOFUNC|_TAG)?$/;
-            next if $name =~ /^(BEGIN|END)_FUNC$/;
-            next if $name =~ /^U?INT(8|16|32|64)(ENCODE|DECODE)(_VAR)?$/;
-            next if $name =~ /^CI_(PRINT_STATS|INC_SRC|INC_DST)$/;
-            next if $name =~ /^(ABS|ADDR_OVERFLOW|ALL_MEMBERS|BOUND|CONSTR|DETECT_[I|F|M]|DOWN)$/;
-            next if $name =~ /^(MIN3?|MAX3?|NELMTS|POWER_OF_TWO|REGION_OVERFLOW)$/;
-            next if $name =~ /^(SIZE_OVERFLOW|UNIQUE_MEMBERS|S_ISDIR)$/;
-            next if $name =~ /^addr_defined$/;
-            next if $name =~ /^TERMINATOR$/;
-
-            # Ignore callback invocation
-            next if $name =~ /^(op|cb|OP|iter_op|func)$/;
-
-            # Ignore main
-            next if $name =~ /^main$/;
-
-            # This often appears in preprocessor lines that span multiple lines
-            next if $name =~ /^(defined)$/;
-
-            # These are Windows system calls. Ignore them.
-            next if $name =~ /^(_get_osfhandle|GetFileInformationByHandle|SetFilePointer|GetLastError|SetEndOfFile)$/;
-            next if $name =~ /^(FindNextFile|FindClose|_tzset|Wgettimeofday|GetSystemTimeAsFileTime|GetUserName)$/;
-            next if $name =~ /^(DeleteCriticalSection|TlsFree|TlsGetValue|CreateThread)$/;
-            next if $name =~ /^(ExpandEnvironmentStringsA|LockFileEx|UnlockFileEx)$/;
-            next if $name =~ /^(DllMain|LocalAlloc|LocalFree)$/;
-            next if $name =~ /^(FindFirstFileA|FindNextFileA)$/;
-            next if $name =~ /^(_beginthread|(Initialize|Enter|Leave)CriticalSection|TlsAlloc)$/;
-
-            # These are MPI function calls. Ignore them.
-            next if $name =~ /^(MPI_)/;
-
-            # These are POSIX threads function calls. Ignore them.
-            next if $name =~ /^pthread_/;
-
-            # These are zlib & szlib function calls. Ignore them.
-            next if $name =~ /^(inflate|SZ_)/;
-            next if $name =~ /^compress2$/;
-
-            # These is an H5Dfill function. Ignore it in this file.
-            if($filename =~ /H5Dfill/) {
-                next if $name =~ /^(alloc_func)$/;
-            }
-
-            # These are H5Zscaleoffset functions. Ignore them in this file.
-            if($filename =~ /H5Zscaleoffset/) {
-                next if $name =~ /^(pow_fun|round_fun|abs_fun|lround_fun|llround_fun)$/;
-            }
-
-            # This is a macro parameter in H5Rint.c. Ignore it in this file.
-            if($filename =~ /H5Rint/) {
-                next if $name =~ /^(func)$/;
-            }
-
-            # Internal calls in the HDFS VFD (H5FDhdfs.c). Ignore it in this file.
-            if($filename =~ /H5FDhdfs/) {
-                next if $name =~ /^(hdfs)/;
-            }
-
-            # Macros, etc. from the mirror VFD (H5FDmirror.c). Ignore in this file.
-            if($filename =~ /H5FDmirror/) {
-                next if $name =~ /^(LOG)/;
-                next if $name =~ /^(BSWAP_64|is_host_little_endian)$/;
-            }
-
-            # These are things in H5FDs3comms.c and H5FDros3.c. Ignore them in these files.
-            if($filename =~ /H5FDs3comms|H5FDros3/) {
-                next if $name =~ /^(curl_|curlwritecallback|gmnow)/;
-                next if $name =~ /^(ros3_|ROS3_|S3COMMS_)/;
-                next if $name =~ /^(EVP_sha256|SHA256|ISO8601NOW)$/;
-            }
-
-            # TESTING (not comprehensive - just noise reduction)
-
-            # Test macros and functions (testhdf5.h)
-            next if $name =~ /^(AddTest|TestErrPrintf|TestSummary|TestCleanup|TestShutdown)$/;
-            next if $name =~ /^(CHECK|CHECK_PTR|CHECK_PTR_NULL|CHECK_PTR_EQ|CHECK_I)$/;
-            next if $name =~ /^(VERIFY|VERIFY_STR|VERIFY_TYPE|MESSAGE|ERROR)$/;
-
-            # Test macros and functions (h5test.h)
-            next if $name =~ /^(TESTING|PASSED|SKIPPED|PUTS_ERROR|FAIL_PUTS_ERROR|FAIL_STACK_ERROR|TEST_ERROR|AT)$/;
-            next if $name =~ /^(GetTestExpress)$/;
-
-            # Ignore functions that start with test_ or check_
-            next if $name =~ /^test_/;
-            next if $name =~ /^check_/;
-
-            # Ignore functions that start with h5_
-            next if $name =~ /^h5_/;
-
-            # Ignore process completed status
-            next if $name =~ /(WIFEXITED|WEXITSTATUS|WIFSIGNALED|WTERMSIG|WCOREDUMP|WIFSTOPPED|WSTOPSIG)/;
-
-            # Ignore usage functions
-            next if $name =~ /^usage$/;
-
-            # Ignore callbacks
-            next if $name =~ /(_cb\d?)$/;
-
-            # Specific tests (not even remotely comprehensive)
-
-            # accum test code
-            if($filename =~ /accum/) {
-                next if $name =~ /^(accum_)/;
-            }
-
-            # cache test code
-            if($filename =~ /cache/) {
-                next if $name =~ /(_entry|_entries|_cache|_check|_dependency|_status|_op)$/;
-                next if $name =~ /^(verify_|smoke_check_|row_major_|col_major_)/;
-                next if $name =~ /^(resize_configs_are_equal|CACHE_ERROR)$/
-            }
-
-            # Splitter VFD test code. Ignore in vfd.c.
-            if($filename =~ /vfd/) {
-                next if $name =~ /^(SPLITTER_|splitter_)/;
-                next if $name =~ /(_splitter_)/;
-                next if $name =~ /^(file_exists)$/;
-            }
-
-            # S3 VFD test code. Ignore in ros3.c and s3comms.c.
-            # HDFS VFD test code. Ignore in hdfs.c.
-            if($filename =~ /ros3|s3comms|hdfs/) {
-                next if $name =~ /^(JSVERIFY|JSFAILED_|JSERR_|jserr_|FAIL_)/;
-                next if $name =~ /^(curl_)/;
-                next if $name =~ /^(S3COMMS_FORMAT_CREDENTIAL|ISO8601NOW|gmnow)$/;
-            }
-
-            # VDS test code. Ignore in vds.c.
-            if($filename =~ /vds/) {
-                next if $name =~ /^(vds_)/;
-            }
-
-            print "$filename:$.: $name\n";
-        }
-
-    }
-
-    # Close the file
-    close($fh);
-}
-
-if($#ARGV gt 0) {
-    print "\n";
-    print "NOTE:\n";
-    print "If any files were skipped due to being exempt, you can inspect them manually\n";
-    print "by using this script on them one at a time, which will always process the file.\n";
-}
diff --git a/src/.indent.pro b/src/.indent.pro
deleted file mode 100644
index fa375f0..0000000
--- a/src/.indent.pro
+++ /dev/null
@@ -1,150 +0,0 @@
--bad  /* Blank line after declarations */
--bap  /* Blank line after procedure */
--bbb  /* No blank line before boxed comments */
--bbo  /* Try to break long lines at boolean operators && and || */
--nbc  /* Don't force newlines after commas in declarations */
--br   /* Put braces on the same line as the statement (not -bl) */
--brs  /* Put braces on the same line as the struct declaration (not -bls) */
--nbs  /* Don't put a space between a sizeof operator and it's object */
--c33  /* Start comments after code in column 33 */
--cbi0 /* Indent braces below a case statement 0 spaces to right of case statement */
--cd33 /* Start comments after declarations in column 33 */
--ncdb /* Don't put comment delimiters on their own lines */
--cdw  /* "Cuddle" while statements onto the same line as the closing do statement's brace */
--nce  /* Don't "Cuddle" else statements onto the same line as the closing if statement's brace */
--ci8  /* Align continued code 8 spaces from initial indention */
--cli4 /* Indent case statements 4 spaces to right of switch statement */
--cp0  /* Start comments after pre-processor directives immediately after the directive */
--ncs  /* Don't put a space between a cast operator and it's object */
--d0   /* Align comments on their own line with the surrounding code */
--nbfda /* Don't force newlines after commas in function argument declarations */
--di24 /* Align identifiers in declarations in column 24 */
--nfc1 /* Don't format comments in the first column */
--nfca /* Don't format comments on their own line */
--hnl  /* Honor existing new-lines in long boolean statements */
--i4   /* Indent space spaces */
--ip8  /* Don't add any extra indention for nested parentheses */
--l78  /* Try to break long lines in column 78 */
--lc78 /* Try to break long comment lines in column 78 */
--nlp  /* Don't align lines continued onto further lines with the opening parentheses */
--lps  /* Leave spaces in preprocessor directives alone */
--npcs /* Don't put a space between the procedure name and it's parameters */
--npcs /* Don't put a space between the procedure name and it's parameters */
--pi4  /* Extra indentation per open parentheses */
--pmt  /* Preserve modification times on modified files */
--nprs /* Don't add spaces around parentheses */
--psl  /* Force the return type of a procedure to be on it's own line */
--nsaf /* Don't put a space between a for statement and it's initial parentheses */
--nsai /* Don't put a space between an if statement and it's initial parentheses */
--nsaw /* Don't put a space between a while statement and it's initial parentheses */
--sbi0 /* Indent braces after a struct, union or enum 0 spaces */
--sc   /* Put stars at the beginning of multi-line comments */
--nsob /* Don't swallow optional blank lines */
--ss   /* Put a space before the semicolon if its the only statement in a for or while loop */
--ts8  /* Hard tab characters are 8 spaces */
-/* The rest are typedefs used by the library, feel free to add missing ones, */
-/*  but try to keep them alphabetized */
--T H5AC_class_t
--T H5AC_prot_t
--T H5AC_slot_t
--T H5AC_subid_t
--T H5AC_t
--T H5A_t
--T H5Asearch_func_t
--T H5B_class_t
--T H5B_ins_t
--T H5B_key_t
--T H5B_subid_t
--T H5B_t
--T H5C_class_t
--T H5C_t
--T H5D_create_t
--T H5D_layout_t
--T H5D_t
--T H5E_error_t
--T H5E_major_mesg_t
--T H5E_major_t
--T H5E_minor_mesg_t
--T H5E_minor_t
--T H5E_t
--T H5F_create_t
--T H5F_shared_t
--T H5F_isop_t
--T H5F_istore_key_t
--T H5F_istore_ud1_t
--T H5F_low_class_t
--T H5F_low_t
--T H5F_search_t
--T H5F_t
--T H5Fget_create_t
--T H5G_bt_ud1_t
--T H5G_bt_ud2_t
--T H5G_cache_t
--T H5G_cwgstk_t
--T H5G_entry_t
--T H5G_node_key_t
--T H5G_node_t
--T H5G_t
--T H5G_type_t
--T H5H_free_t
--T H5H_t
--T H5H_type_t
--T H5M_find_t
--T H5O_chunk_t
--T H5O_class_t
--T H5O_cont_t
--T H5O_efl_t
--T H5O_layout_t
--T H5O_mesg_t
--T H5O_name_t
--T H5O_stab_t
--T H5O_t
--T H5P_class_t
--T H5P_simple_t
--T H5P_t
--T H5T_class_t
--T H5T_conv_t
--T H5T_cset_t
--T H5T_member_t
--T H5T_norm_t
--T H5T_order_t
--T H5T_pad_t
--T H5T_path_t
--T H5T_sign_t
--T H5T_soft_t
--T H5T_str_t
--T H5T_t
--T H5Tget_member_t
--T H5_exit_t
--T H5_init_t
--T H5_t
--T H5_term_t
--T access_t
--T atom_group_t
--T atom_info_t
--T cache_t
--T child_t
--T chunk_t
--T create_t
--T data_t
--T detected_t
--T group_t
--T haddr_t
--T hbool_t
--T heap_t
--T herr_t
--T hid_t
--T hobjtype_t
--T hsize_t
--T hssize_t
--T ino_t
--T mem_t
--T memb_t
--T mesg_t
--T message_t
--T meta_func_t
--T new_t
--T off_t
--T size_t
--T ssize_t
--T time_t
diff --git a/src/hdf5-lin.lnt b/src/hdf5-lin.lnt
deleted file mode 100644
index 23ceed2..0000000
--- a/src/hdf5-lin.lnt
+++ /dev/null
@@ -1,21 +0,0 @@
-// Define the __func__ macro so we don't get warnings about using it.
--d__func__="NoFunctionName"
-
-// Needed for gcc assert() macro
--function(exit,__assert_fail)
-
-// Needed to allow 'long long' with gcc
-+fll
-
-// Suppress message about "Constant value boolean" in assert macros
--emacro(506,assert)
-
-// Turn off warnings about not using the return value from these functions:
--emacro(534,HDfflush,HDgetrusage,HDgettimeofday,HDputc)
-
-// Suppress message about "Expression with side effects passed to repeated parameter 1 in macro 'assert'"
--esym(666,assert)
-
-// Include shared lint options file
-hdf5.lnt
-
diff --git a/src/hdf5-win.lnt b/src/hdf5-win.lnt
deleted file mode 100644
index 350b603..0000000
--- a/src/hdf5-win.lnt
+++ /dev/null
@@ -1,39 +0,0 @@
-// Define the __FUNCTION__ so we don't get warnings about using it.
--d__FUNCTION__="NoFunctionName"
-
-// Turn off warnings about "Ignoring return value of function" for
-// H5open() in public error macros
--emacro(534, H5Epush_ret, H5Epush_goto)
-
-// Suppress message about "Suspicious cast" in FUNC_ENTER* macros
--emacro(611,FUNC_ENTER_API,FUNC_ENTER_NOAPI)
-
-// Suppress message about "Boolean within 'if' always evaluates false" in FUNC_ENTER* macros
--emacro(774,FUNC_ENTER_API,FUNC_ENTER_NOAPI)
-
-// Suppress message about "Static variable found within inline function" in FUNC_ENTER* macros
--emacro(1534,FUNC_ENTER_NOINIT)
-
-// Suppress message about "Shift right of signed quantity" in H5I_GRP macro
--emacro(702,H5I_GRP)
-
-// Suppress message about "Constant expression evaluates to 0 in expression" in H5FL_ARR* macros
--emacro(778,H5FL_ARR_DEFINE_COMMON)
-
-// Suppress message about "Union initialization" in H5FL_ARR* macros
--emacro(708,H5FL_ARR_DEFINE_COMMON)
-
-// Suppress message about "enum constant not used within defaulted switch"
--e788
-
-// Indicate functions that are like printf()
--printf(2,HDfprintf)
-
-// Tell lint about additional printf() format codes that HDfprintf understands
--printf_code(a,haddr_t)
--printf_code(Hu,hsize_t)
--printf_code(Hd,hssize_t)
--printf_code(Zu,size_t)
--printf_code(Zd,ssize_t)
-
-
diff --git a/src/hdf5.lnt b/src/hdf5.lnt
deleted file mode 100644
index 7b0f384..0000000
--- a/src/hdf5.lnt
+++ /dev/null
@@ -1,85 +0,0 @@
-// Lint options shared by both PC-Lint for Windows and Flexelint for Linux
-
-// Turn off warnings about not using the inlined H5V* functions:
--esym(528, H5VM_vector_reduce_product, H5VM_vector_inc)
--esym(528, H5VM_vector_cmp_s)
--esym(528, H5VM_vector_zerop_s, H5VM_vector_zerop_u)
-
-// Suppress message about using 'goto' in a few functions
--efunc(801,H5_term_library,H5_trace)
-
-// Suppress message about "boolean test of a paranthesized assignment"
--efunc(820,H5_term_library)
-
-// Suppress message about "Constant value boolean" in FUNC_ENTER* macros
--emacro(506,FUNC_ENTER_API,FUNC_ENTER_API_NOCLEAR, FUNC_ENTER_NOAPI)
-
-// Suppress message about "Constant value boolean" in TRUE macros
--emacro(506,TRUE)
-
-// Suppress message about our use of 'goto' in our error macros
--emacro(801,HGOTO_DONE, H5Epush_goto)
-
-// Turn off warnings about not using the return value from these functions:
--esym(534, HDfprintf, HDsnprintf, HDvsnprintf)
--esym(534, H5E_clear_stack, H5E_push_stack)
--esym(534, H5FL_arr_free, H5FL_blk_free, H5FL_reg_free, H5FL_seq_free)
--esym(534, H5CS_push, H5CS_pop)
--esym(534, H5I_clear_type, H5I_dec_type_ref)
--esym(534, H5MM_xfree)
--esym(534, H5UC_decr)
--esym(534, H5VM_array_fill)
-
-/* So far, the following files have been linted with these options:
-        H5.c
-        H5A.c
-        H5AC.c
-        H5B.c
-
-        H5D.c
-        H5Dcompact.c
-        H5Dcontig.c
-        H5Defl.c
-        H5Dio.c
-        H5Distore.c
-        H5E.c
-        H5F.c
-        H5FD.c
-        H5FDcore.c
-        H5FDfamily.c
-        H5FDlog.c
-        H5FDmulti.c
-        H5FDsec2.c
-        H5FDstdio.c
-        H5FL.c
-        H5FO.c
-
-        H5Tcommit.c
-        H5Tcompound.c
-
-        H5Tcset.c
-        H5Tenum.c
-        H5Tfields.c
-        H5Tfixed.c
-        H5Tfloat.c
-        H5Tnative.c
-        H5Toffset.c
-        H5Topaque.c
-        H5Torder.c
-        H5Tpad.c
-        H5Tprecis.c
-        H5Tstrpad.c
-        H5Tvlen.c
-        H5V.c
-        H5Z.c
-        H5Zdeflate.c
-        H5Zfletcher32.c
-        H5Zshuffle.c
-        H5Zszip.c
-
-    The following files have had their FUNC_ENTER, FUNC_LEAVE & HGOTO*
-    macros cleaned up, but have not been linted
-    due to their dependencies on features that we don't support on Windows:
-        H5FDmpio.c
-        H5FDstream.c
-*/