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authorAllen Byrne <byrn@hdfgroup.org>2019-08-15 21:14:29 (GMT)
committerAllen Byrne <byrn@hdfgroup.org>2019-08-15 21:14:29 (GMT)
commitec8b17858a79c9a90b990521a4b0345d7c74ad45 (patch)
tree18e3dbd4b09eacf4925fdd0cfa4e0a0e6dc06b71
parent0f493af6a46b5d5234ba4bbb3e18028a4002bb85 (diff)
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Mostly whitespace plus fix broken perf_serial
-rw-r--r--testpar/CMakeVFDTests.cmake68
-rw-r--r--testpar/t_cache.c2801
-rw-r--r--testpar/t_chunk_alloc.c114
-rw-r--r--testpar/t_dset.c1279
-rw-r--r--testpar/t_mdset.c96
-rw-r--r--testpar/t_mpi.c1544
-rw-r--r--testpar/t_pflush1.c264
-rw-r--r--testpar/t_pflush2.c265
-rw-r--r--testpar/t_shapesame.c1737
-rw-r--r--testpar/t_span_tree.c760
-rw-r--r--testpar/testphdf5.c493
-rw-r--r--tools/perform/sio_perf.h1
12 files changed, 4636 insertions, 4786 deletions
diff --git a/testpar/CMakeVFDTests.cmake b/testpar/CMakeVFDTests.cmake
index 7db99de..0726da2 100644
--- a/testpar/CMakeVFDTests.cmake
+++ b/testpar/CMakeVFDTests.cmake
@@ -15,32 +15,32 @@
### T E S T I N G ###
##############################################################################
##############################################################################
- set (VFD_LIST
- sec2
- stdio
- core
- split
- multi
- family
- )
+set (VFD_LIST
+ sec2
+ stdio
+ core
+ split
+ multi
+ family
+)
- set (H5P_VFD_TESTS
- t_pflush1
- t_pflush2
- )
+set (H5P_VFD_TESTS
+ t_pflush1
+ t_pflush2
+)
- if (DIRECT_VFD)
- set (VFD_LIST ${VFD_LIST} direct)
- endif ()
+if (DIRECT_VFD)
+ set (VFD_LIST ${VFD_LIST} direct)
+endif ()
foreach (vfdtest ${VFD_LIST})
file (MAKE_DIRECTORY "${PROJECT_BINARY_DIR}/${vfdtest}")
endforeach ()
- macro (ADD_VFD_TEST vfdname resultcode)
- if (NOT HDF5_ENABLE_USING_MEMCHECKER)
- foreach (h5_test ${H5P_VFD_TESTS})
- add_test (
+macro (ADD_VFD_TEST vfdname resultcode)
+ if (NOT HDF5_ENABLE_USING_MEMCHECKER)
+ foreach (h5_test ${H5P_VFD_TESTS})
+ add_test (
NAME MPI_TEST_VFD-${vfdname}-${h5_test}
COMMAND "${CMAKE_COMMAND}"
-D "TEST_EMULATOR=${CMAKE_CROSSCOMPILING_EMULATOR}"
@@ -51,16 +51,22 @@ endforeach ()
-D "TEST_OUTPUT=${vfdname}-${h5_test}.out"
-D "TEST_FOLDER=${PROJECT_BINARY_DIR}/${vfdname}"
-P "${HDF_RESOURCES_DIR}/vfdTest.cmake"
- )
- set_tests_properties (MPI_TEST_VFD-${vfdname}-${h5_test} PROPERTIES
- ENVIRONMENT "srcdir=${HDF5_TEST_PAR_BINARY_DIR}/${vfdname}"
- WORKING_DIRECTORY ${HDF5_TEST_PAR_BINARY_DIR}/${vfdname}
- )
- endforeach ()
- endif ()
- endmacro ()
+ )
+ set_tests_properties (MPI_TEST_VFD-${vfdname}-${h5_test} PROPERTIES
+ ENVIRONMENT "srcdir=${HDF5_TEST_PAR_BINARY_DIR}/${vfdname}"
+ WORKING_DIRECTORY ${HDF5_TEST_PAR_BINARY_DIR}/${vfdname}
+ )
+ endforeach ()
+ endif ()
+endmacro ()
+
+##############################################################################
+##############################################################################
+### T H E T E S T S ###
+##############################################################################
+##############################################################################
- # Run test with different Virtual File Driver
- foreach (h5_vfd ${VFD_LIST})
- ADD_VFD_TEST (${h5_vfd} 0)
- endforeach ()
+# Run test with different Virtual File Driver
+foreach (h5_vfd ${VFD_LIST})
+ ADD_VFD_TEST (${h5_vfd} 0)
+endforeach ()
diff --git a/testpar/t_cache.c b/testpar/t_cache.c
index 813fb43..10ee0f6 100644
--- a/testpar/t_cache.c
+++ b/testpar/t_cache.c
@@ -16,7 +16,6 @@
*
*/
-#include "h5test.h"
#include "testpar.h"
#include "H5Iprivate.h"
#include "H5ACprivate.h"
@@ -34,15 +33,9 @@
#include "H5Fpkg.h"
-int nerrors = 0;
-int failures = 0;
-hbool_t verbose = TRUE; /* used to control error messages */
-#if 0
-/* So far we haven't needed this, but that may change.
- * Keep it around for now
- */
-hid_t noblock_dxpl_id=(-1);
-#endif
+int nerrors = 0;
+int failures = 0;
+hbool_t verbose = TRUE; /* used to control error messages */
#define NFILENAME 2
#define PARATESTFILE filenames[0]
@@ -54,13 +47,13 @@ char filenames[NFILENAME][PATH_MAX];
hid_t fapl; /* file access property list */
-int world_mpi_size = -1;
-int world_mpi_rank = -1;
-int world_server_mpi_rank = -1;
-MPI_Comm world_mpi_comm = MPI_COMM_NULL;
-int file_mpi_size = -1;
-int file_mpi_rank = -1;
-MPI_Comm file_mpi_comm = MPI_COMM_NULL;
+int world_mpi_size = -1;
+int world_mpi_rank = -1;
+int world_server_mpi_rank = -1;
+MPI_Comm world_mpi_comm = MPI_COMM_NULL;
+int file_mpi_size = -1;
+int file_mpi_rank = -1;
+MPI_Comm file_mpi_comm = MPI_COMM_NULL;
/* the following globals are used to maintain rudementary statistics
@@ -73,122 +66,123 @@ long datum_destroys = 0;
long datum_flushes = 0;
long datum_pinned_flushes = 0;
long datum_loads = 0;
-long global_pins = 0;
-long global_dirty_pins = 0;
-long local_pins = 0;
+long global_pins = 0;
+long global_dirty_pins = 0;
+long local_pins = 0;
/* the following fields are used by the server process only */
-int total_reads = 0;
+int total_reads = 0;
int total_writes = 0;
/*****************************************************************************
* struct datum
*
- * Instances of struct datum are used to store information on entries
- * that may be loaded into the cache. The individual fields are
- * discussed below:
+ * Instances of struct datum are used to store information on entries
+ * that may be loaded into the cache. The individual fields are
+ * discussed below:
*
- * header: Instance of H5C_cache_entry_t used by the for its data.
- * This field is only used on the file processes, not on the
- * server process.
+ * header: Instance of H5C_cache_entry_t used by the for its data.
+ * This field is only used on the file processes, not on the
+ * server process.
*
- * This field MUST be the first entry in this structure.
+ * This field MUST be the first entry in this structure.
*
- * base_addr: Base address of the entry.
+ * base_addr: Base address of the entry.
*
- * len: Length of the entry.
+ * len: Length of the entry.
*
- * local_len: Length of the entry according to the cache. This
- * value must be positive, and may not be larger than len.
+ * local_len: Length of the entry according to the cache. This
+ * value must be positive, and may not be larger than len.
*
- * The field exists to allow us change the sizes of entries
- * in the cache without upsetting the server. This value
- * is only used locally, and is never sent to the server.
+ * The field exists to allow us change the sizes of entries
+ * in the cache without upsetting the server. This value
+ * is only used locally, and is never sent to the server.
*
- * ver: Version number of the entry. This number is initialize
- * to zero, and incremented each time the entry is modified.
+ * ver: Version number of the entry. This number is initialize
+ * to zero, and incremented each time the entry is modified.
*
- * dirty: Boolean flag indicating whether the entry is dirty.
+ * dirty: Boolean flag indicating whether the entry is dirty.
*
- * For current purposes, an entry is clean until it is
- * modified, and dirty until written to the server (cache
- * on process 0) or until it is marked clean (all other
- * caches).
+ * For current purposes, an entry is clean until it is
+ * modified, and dirty until written to the server (cache
+ * on process 0) or until it is marked clean (all other
+ * caches).
*
- * valid: Boolean flag indicating whether the entry contains
- * valid data. Attempts to read an entry whose valid
- * flag is not set should trigger an error.
+ * valid: Boolean flag indicating whether the entry contains
+ * valid data. Attempts to read an entry whose valid
+ * flag is not set should trigger an error.
*
- * locked: Boolean flag that is set to true iff the entry is in
- * the cache and locked.
+ * locked: Boolean flag that is set to true iff the entry is in
+ * the cache and locked.
*
- * global_pinned: Boolean flag that is set to true iff the entry has
- * been pinned collectively in all caches. Since writes must
- * be collective across all processes, only entries pinned
- * in this fashion may be marked dirty.
+ * global_pinned: Boolean flag that is set to true iff the entry has
+ * been pinned collectively in all caches. Since writes must
+ * be collective across all processes, only entries pinned
+ * in this fashion may be marked dirty.
*
- * local_pinned: Boolean flag that is set to true iff the entry
- * has been pinned in the local cache, but probably not all
- * caches. Such pins will typically not be consistant across
- * processes, and thus cannot be marked as dirty unless they
- * happen to overlap some collective operation.
+ * local_pinned: Boolean flag that is set to true iff the entry
+ * has been pinned in the local cache, but probably not all
+ * caches. Such pins will typically not be consistant across
+ * processes, and thus cannot be marked as dirty unless they
+ * happen to overlap some collective operation.
*
- * cleared: Boolean flag that is set to true whenever the entry is
- * dirty, and is cleared via a call to clear_datum().
+ * cleared: Boolean flag that is set to true whenever the entry is
+ * dirty, and is cleared via a call to datum_notify with the
+ * "entry cleaned" action.
*
- * flushed: Boolean flag that is set to true whenever the entry is
- * dirty, and is flushed via a call to flush_datum().
+ * flushed: Boolean flag that is set to true whenever the entry is
+ * dirty, and is flushed by the metadata cache.
*
- * reads: Integer field used to maintain a count of the number of
- * times this entry has been read from the server since
- * the last time the read and write counts were reset.
+ * reads: Integer field used to maintain a count of the number of
+ * times this entry has been read from the server since
+ * the last time the read and write counts were reset.
*
- * writes: Integer field used to maintain a count of the number of
- * times this entry has been written to the server since
- * the last time the read and write counts were reset.
+ * writes: Integer field used to maintain a count of the number of
+ * times this entry has been written to the server since
+ * the last time the read and write counts were reset.
*
- * index: Index of this instance of datum in the data_index[] array
- * discussed below.
+ * index: Index of this instance of datum in the data_index[] array
+ * discussed below.
*
*****************************************************************************/
struct datum
{
- H5C_cache_entry_t header;
- haddr_t base_addr;
- size_t len;
- size_t local_len;
- int ver;
- hbool_t dirty;
- hbool_t valid;
- hbool_t locked;
- hbool_t global_pinned;
- hbool_t local_pinned;
- hbool_t cleared;
- hbool_t flushed;
- int reads;
- int writes;
- int index;
+ H5C_cache_entry_t header;
+ haddr_t base_addr;
+ size_t len;
+ size_t local_len;
+ int ver;
+ hbool_t dirty;
+ hbool_t valid;
+ hbool_t locked;
+ hbool_t global_pinned;
+ hbool_t local_pinned;
+ hbool_t cleared;
+ hbool_t flushed;
+ int reads;
+ int writes;
+ int index;
};
/*****************************************************************************
* data array
*
- * The data array is an array of instances of datum of size
- * NUM_DATA_ENTRIES that is used to track the particulars of all
- * the entries that may be loaded into the cache.
+ * The data array is an array of instances of datum of size
+ * NUM_DATA_ENTRIES that is used to track the particulars of all
+ * the entries that may be loaded into the cache.
*
- * It exists on all processes, although the master copy is maintained
- * by the server process. If the cache is performing correctly, all
- * versions should be effectively identical. By that I mean that
- * the data received from the server should always match that in
- * the local version of the data array.
+ * It exists on all processes, although the master copy is maintained
+ * by the server process. If the cache is performing correctly, all
+ * versions should be effectively identical. By that I mean that
+ * the data received from the server should always match that in
+ * the local version of the data array.
*
*****************************************************************************/
-#define NUM_DATA_ENTRIES 100000
+#define NUM_DATA_ENTRIES 100000
struct datum data[NUM_DATA_ENTRIES];
@@ -207,10 +201,10 @@ struct datum data[NUM_DATA_ENTRIES];
* Further, this value must be consistant across all processes.
*/
-#define STD_VIRT_NUM_DATA_ENTRIES NUM_DATA_ENTRIES
-#define EXPRESS_VIRT_NUM_DATA_ENTRIES (NUM_DATA_ENTRIES / 10)
+#define STD_VIRT_NUM_DATA_ENTRIES NUM_DATA_ENTRIES
+#define EXPRESS_VIRT_NUM_DATA_ENTRIES (NUM_DATA_ENTRIES / 10)
/* Use a smaller test size to avoid creating huge MPE logfiles. */
-#define MPE_VIRT_NUM_DATA_ENTIES (NUM_DATA_ENTRIES / 100)
+#define MPE_VIRT_NUM_DATA_ENTIES (NUM_DATA_ENTRIES / 100)
int virt_num_data_entries = NUM_DATA_ENTRIES;
@@ -218,14 +212,14 @@ int virt_num_data_entries = NUM_DATA_ENTRIES;
/*****************************************************************************
* data_index array
*
- * The data_index array is an array of integer used to maintain a list
- * of instances of datum in the data array in increasing base_addr order.
+ * The data_index array is an array of integer used to maintain a list
+ * of instances of datum in the data array in increasing base_addr order.
*
- * This array is necessary, as move operations can swap the values
- * of the base_addr fields of two instances of datum. Without this
- * array, we would no longer be able to use a binary search on a sorted
- * list to find the indexes of instances of datum given the values of
- * their base_addr fields.
+ * This array is necessary, as move operations can swap the values
+ * of the base_addr fields of two instances of datum. Without this
+ * array, we would no longer be able to use a binary search on a sorted
+ * list to find the indexes of instances of datum given the values of
+ * their base_addr fields.
*
*****************************************************************************/
@@ -234,99 +228,99 @@ int data_index[NUM_DATA_ENTRIES];
/*****************************************************************************
* The following two #defines are used to control code that is in turn used
- * to force "POSIX" semantics on the server process used to simulate metadata
- * reads and writes. Without some such mechanism, the test code contains
+ * to force "POSIX" semantics on the server process used to simulate metadata
+ * reads and writes. Without some such mechanism, the test code contains
* race conditions that will frequently cause spurious failures.
*
* When set to TRUE, DO_WRITE_REQ_ACK forces the server to send an ack after
- * each write request, and the client to wait until the ack is received
+ * each write request, and the client to wait until the ack is received
* before proceeding. This was my first solution to the problem, and at
* first glance, it would seem to have a lot of unnecessary overhead.
*
* In an attempt to reduce the overhead, I implemented a second solution
- * in which no acks are sent after writes. Instead, the metadata cache is
- * provided with a callback function to call after each sequence of writes.
- * This callback simply causes the client to send the server process a
+ * in which no acks are sent after writes. Instead, the metadata cache is
+ * provided with a callback function to call after each sequence of writes.
+ * This callback simply causes the client to send the server process a
* "sync" message and and await an ack in reply.
*
- * Strangely, at least on Phoenix, the first solution runs faster by a
- * rather large margin. However, I can imagine this changing with
+ * Strangely, at least on Phoenix, the first solution runs faster by a
+ * rather large margin. However, I can imagine this changing with
* different OS's and MPI implementatins.
*
- * Thus I have left code supporting the second solution in place.
+ * Thus I have left code supporting the second solution in place.
*
- * Note that while one of these two #defines must be set to TRUE, there
- * should never be any need to set both of them to TRUE (although the
+ * Note that while one of these two #defines must be set to TRUE, there
+ * should never be any need to set both of them to TRUE (although the
* tests will still function with this setting).
*****************************************************************************/
-#define DO_WRITE_REQ_ACK TRUE
-#define DO_SYNC_AFTER_WRITE FALSE
+#define DO_WRITE_REQ_ACK TRUE
+#define DO_SYNC_AFTER_WRITE FALSE
/*****************************************************************************
* struct mssg
*
- * The mssg structure is used as a generic container for messages to
- * and from the server. Not all fields are used in all cases.
+ * The mssg structure is used as a generic container for messages to
+ * and from the server. Not all fields are used in all cases.
*
- * req: Integer field containing the type of the message.
+ * req: Integer field containing the type of the message.
*
- * src: World communicator MPI rank of the sending process.
+ * src: World communicator MPI rank of the sending process.
*
- * dest: World communicator MPI rank of the destination process.
+ * dest: World communicator MPI rank of the destination process.
*
- * mssg_num: Serial number assigned to the message by the sender.
+ * mssg_num: Serial number assigned to the message by the sender.
*
- * base_addr: Base address of a datum. Not used in all mssgs.
+ * base_addr: Base address of a datum. Not used in all mssgs.
*
- * len: Length of a datum (in bytes). Not used in all mssgs.
+ * len: Length of a datum (in bytes). Not used in all mssgs.
*
- * ver: Version number of a datum. Not used in all mssgs.
+ * ver: Version number of a datum. Not used in all mssgs.
*
- * count: Reported number of total/entry reads/writes. Not used
- * in all mssgs.
+ * count: Reported number of total/entry reads/writes. Not used
+ * in all mssgs.
*
- * magic: Magic number for error detection. Must be set to
- * MSSG_MAGIC.
+ * magic: Magic number for error detection. Must be set to
+ * MSSG_MAGIC.
*
*****************************************************************************/
-#define WRITE_REQ_CODE 0
-#define WRITE_REQ_ACK_CODE 1
-#define READ_REQ_CODE 2
-#define READ_REQ_REPLY_CODE 3
-#define SYNC_REQ_CODE 4
-#define SYNC_ACK_CODE 5
-#define REQ_TTL_WRITES_CODE 6
-#define REQ_TTL_WRITES_RPLY_CODE 7
-#define REQ_TTL_READS_CODE 8
-#define REQ_TTL_READS_RPLY_CODE 9
-#define REQ_ENTRY_WRITES_CODE 10
-#define REQ_ENTRY_WRITES_RPLY_CODE 11
-#define REQ_ENTRY_READS_CODE 12
-#define REQ_ENTRY_READS_RPLY_CODE 13
-#define REQ_RW_COUNT_RESET_CODE 14
-#define REQ_RW_COUNT_RESET_RPLY_CODE 15
-#define DONE_REQ_CODE 16
-#define MAX_REQ_CODE 16
-
-#define MSSG_MAGIC 0x1248
+#define WRITE_REQ_CODE 0
+#define WRITE_REQ_ACK_CODE 1
+#define READ_REQ_CODE 2
+#define READ_REQ_REPLY_CODE 3
+#define SYNC_REQ_CODE 4
+#define SYNC_ACK_CODE 5
+#define REQ_TTL_WRITES_CODE 6
+#define REQ_TTL_WRITES_RPLY_CODE 7
+#define REQ_TTL_READS_CODE 8
+#define REQ_TTL_READS_RPLY_CODE 9
+#define REQ_ENTRY_WRITES_CODE 10
+#define REQ_ENTRY_WRITES_RPLY_CODE 11
+#define REQ_ENTRY_READS_CODE 12
+#define REQ_ENTRY_READS_RPLY_CODE 13
+#define REQ_RW_COUNT_RESET_CODE 14
+#define REQ_RW_COUNT_RESET_RPLY_CODE 15
+#define DONE_REQ_CODE 16
+#define MAX_REQ_CODE 16
+
+#define MSSG_MAGIC 0x1248
struct mssg_t
{
- int req;
- int src;
- int dest;
- long int mssg_num;
- haddr_t base_addr;
- unsigned len;
- int ver;
- int count;
- unsigned magic;
+ int req;
+ int src;
+ int dest;
+ long int mssg_num;
+ haddr_t base_addr;
+ unsigned len;
+ int ver;
+ unsigned count;
+ unsigned magic;
};
-MPI_Datatype mpi_mssg_t; /* for MPI derived type created from mssg */
+MPI_Datatype mpi_mssg_t; /* for MPI derived type created from mssg */
/*****************************************************************************/
@@ -387,9 +381,9 @@ static void * load_datum(H5F_t H5_ATTR_UNUSED *f, hid_t H5_ATTR_UNUSED dxpl_id,
void H5_ATTR_UNUSED *udata);
static herr_t size_datum(H5F_t H5_ATTR_UNUSED * f, void * thing, size_t * size_ptr);
-#define DATUM_ENTRY_TYPE H5AC_TEST_ID
+#define DATUM_ENTRY_TYPE H5AC_TEST_ID
-#define NUMBER_OF_ENTRY_TYPES 1
+#define NUMBER_OF_ENTRY_TYPES 1
const H5C_class_t types[NUMBER_OF_ENTRY_TYPES] =
{
@@ -429,9 +423,9 @@ static void pin_protected_entry(int32_t idx, hbool_t global);
static void move_entry(H5F_t * file_ptr, int32_t old_idx, int32_t new_idx);
static hbool_t reset_server_counts(void);
static void resize_entry(int32_t idx, size_t new_size);
-static hbool_t setup_cache_for_test(hid_t * fid_ptr,
+static hbool_t setup_cache_for_test(hid_t * fid_ptr,
H5F_t ** file_ptr_ptr,
- H5C_t ** cache_ptr_ptr,
+ H5C_t ** cache_ptr_ptr,
int metadata_write_strategy);
static void setup_rand(void);
static hbool_t take_down_cache(hid_t fid);
@@ -463,20 +457,20 @@ static hbool_t trace_file_check(int metadata_write_strategy);
#ifdef NOT_USED
/*****************************************************************************
*
- * Function: print_stats()
+ * Function: print_stats()
*
- * Purpose: Print the rudementary stats maintained by t_cache.
+ * Purpose: Print the rudementary stats maintained by t_cache.
*
- * This is a debugging function, which will not normally
- * be run as part of t_cache.
+ * This is a debugging function, which will not normally
+ * be run as part of t_cache.
*
- * Return: void
+ * Return: void
*
- * Programmer: JRM -- 4/17/06
+ * Programmer: JRM -- 4/17/06
*
* Modifications:
*
- * None.
+ * None.
*
*****************************************************************************/
@@ -484,16 +478,16 @@ static void
print_stats(void)
{
HDfprintf(stdout,
- "%d: datum clears / pinned clears / destroys = %ld / %ld / %ld\n",
+ "%d: datum clears / pinned clears / destroys = %ld / %ld / %ld\n",
world_mpi_rank, datum_clears, datum_pinned_clears,
- datum_destroys );
+ datum_destroys );
HDfprintf(stdout,
- "%d: datum flushes / pinned flushes / loads = %ld / %ld / %ld\n",
+ "%d: datum flushes / pinned flushes / loads = %ld / %ld / %ld\n",
world_mpi_rank, datum_flushes, datum_pinned_flushes,
- datum_loads );
+ datum_loads );
HDfprintf(stdout,
- "%d: pins: global / global dirty / local = %ld / %ld / %ld\n",
- world_mpi_rank, global_pins, global_dirty_pins, local_pins);
+ "%d: pins: global / global dirty / local = %ld / %ld / %ld\n",
+ world_mpi_rank, global_pins, global_dirty_pins, local_pins);
HDfflush(stdout);
return;
@@ -501,19 +495,20 @@ print_stats(void)
} /* print_stats() */
#endif /* NOT_USED */
+
/*****************************************************************************
*
- * Function: reset_stats()
+ * Function: reset_stats()
*
- * Purpose: Reset the rudementary stats maintained by t_cache.
+ * Purpose: Reset the rudementary stats maintained by t_cache.
*
- * Return: void
+ * Return: void
*
- * Programmer: JRM -- 4/17/06
+ * Programmer: JRM -- 4/17/06
*
* Modifications:
*
- * None.
+ * None.
*
*****************************************************************************/
@@ -526,9 +521,9 @@ reset_stats(void)
datum_flushes = 0;
datum_pinned_flushes = 0;
datum_loads = 0;
- global_pins = 0;
- global_dirty_pins = 0;
- local_pins = 0;
+ global_pins = 0;
+ global_dirty_pins = 0;
+ local_pins = 0;
return;
@@ -541,20 +536,20 @@ reset_stats(void)
/*****************************************************************************
*
- * Function: set_up_file_communicator()
+ * Function: set_up_file_communicator()
*
- * Purpose: Create the MPI communicator used to open a HDF5 file with.
- * In passing, also initialize the file_mpi... globals.
+ * Purpose: Create the MPI communicator used to open a HDF5 file with.
+ * In passing, also initialize the file_mpi... globals.
*
- * Return: Success: TRUE
+ * Return: Success: TRUE
*
- * Failure: FALSE
+ * Failure: FALSE
*
- * Programmer: JRM -- 11/16/05
+ * Programmer: JRM -- 11/16/05
*
* Modifications:
*
- * None.
+ * None.
*
*****************************************************************************/
@@ -577,7 +572,7 @@ set_up_file_communicator(void)
nerrors++;
success = FALSE;
- if ( verbose ) {
+ if ( verbose ) {
fprintf(stdout,
"%d:%s: MPI_Comm_group() failed with error %d.\n",
world_mpi_rank, fcn_name, mpi_result);
@@ -694,16 +689,16 @@ set_up_file_communicator(void)
/*****************************************************************************
*
- * Function: addr_to_datum_index()
+ * Function: addr_to_datum_index()
*
- * Purpose: Given the base address of a datum, find and return its index
- * in the data array.
+ * Purpose: Given the base address of a datum, find and return its index
+ * in the data array.
*
- * Return: Success: index of target datum.
+ * Return: Success: index of target datum.
*
- * Failure: -1.
+ * Failure: -1.
*
- * Programmer: JRM -- 12/20/05
+ * Programmer: JRM -- 12/20/05
*
*****************************************************************************/
static int
@@ -742,16 +737,16 @@ addr_to_datum_index(haddr_t base_addr)
/*****************************************************************************
*
- * Function: init_data()
+ * Function: init_data()
*
- * Purpose: Initialize the data array, from which cache entries are
- * loaded.
+ * Purpose: Initialize the data array, from which cache entries are
+ * loaded.
*
- * Return: Success: TRUE
+ * Return: Success: TRUE
*
- * Failure: FALSE
+ * Failure: FALSE
*
- * Programmer: JRM -- 12/20/05
+ * Programmer: JRM -- 12/20/05
*
*****************************************************************************/
static void
@@ -787,13 +782,13 @@ init_data(void)
data[i].dirty = FALSE;
data[i].valid = FALSE;
data[i].locked = FALSE;
- data[i].global_pinned = FALSE;
- data[i].local_pinned = FALSE;
- data[i].cleared = FALSE;
- data[i].flushed = FALSE;
+ data[i].global_pinned = FALSE;
+ data[i].local_pinned = FALSE;
+ data[i].cleared = FALSE;
+ data[i].flushed = FALSE;
data[i].reads = 0;
data[i].writes = 0;
- data[i].index = i;
+ data[i].index = i;
data_index[i] = i;
@@ -814,22 +809,22 @@ init_data(void)
/*****************************************************************************
*
- * Function: do_express_test()
+ * Function: do_express_test()
*
- * Purpose: Do an MPI_Allreduce to obtain the maximum value returned
- * by GetTestExpress() across all processes. Return this
- * value.
+ * Purpose: Do an MPI_Allreduce to obtain the maximum value returned
+ * by GetTestExpress() across all processes. Return this
+ * value.
*
- * Envirmoment variables can be different across different
- * processes. This function ensures that all processes agree
- * on whether to do an express test.
+ * Envirmoment variables can be different across different
+ * processes. This function ensures that all processes agree
+ * on whether to do an express test.
*
- * Return: Success: Maximum of the values returned by
- * GetTestExpress() across all processes.
+ * Return: Success: Maximum of the values returned by
+ * GetTestExpress() across all processes.
*
- * Failure: -1
+ * Failure: -1
*
- * Programmer: JRM -- 4/25/06
+ * Programmer: JRM -- 4/25/06
*
*****************************************************************************/
static int
@@ -866,26 +861,21 @@ do_express_test(void)
/*****************************************************************************
*
- * Function: do_sync()
+ * Function: do_sync()
*
- * Purpose: Ensure that all messages sent by this process have been
- * processed before proceeding.
+ * Purpose: Ensure that all messages sent by this process have been
+ * processed before proceeding.
*
- * Do this by exchanging sync req / sync ack messages with
- * the server.
+ * Do this by exchanging sync req / sync ack messages with
+ * the server.
*
- * Do nothing if nerrors is greater than zero.
+ * Do nothing if nerrors is greater than zero.
*
- * Return: void
+ * Return: void
*
- * Programmer: JRM -- 5/10/06
- *
- * Modifications:
- *
- * None.
+ * Programmer: JRM -- 5/10/06
*
*****************************************************************************/
-
static void
do_sync(void)
{
@@ -896,7 +886,7 @@ do_sync(void)
if ( nerrors <= 0 ) {
/* compose the message */
- mssg.req = SYNC_REQ_CODE;
+ mssg.req = SYNC_REQ_CODE;
mssg.src = world_mpi_rank;
mssg.dest = world_server_mpi_rank;
mssg.mssg_num = -1; /* set by send function */
@@ -906,10 +896,10 @@ do_sync(void)
mssg.count = 0;
mssg.magic = MSSG_MAGIC;
- if ( ! send_mssg(&mssg, FALSE) ) {
+ if ( ! send_mssg(&mssg, FALSE) ) {
- nerrors++;
- if ( verbose ) {
+ nerrors++;
+ if ( verbose ) {
HDfprintf(stdout, "%d:%s: send_mssg() failed.\n",
world_mpi_rank, fcn_name);
}
@@ -918,24 +908,24 @@ do_sync(void)
if ( nerrors <= 0 ) {
- if ( ! recv_mssg(&mssg, SYNC_ACK_CODE) ) {
+ if ( ! recv_mssg(&mssg, SYNC_ACK_CODE) ) {
nerrors++;
if ( verbose ) {
HDfprintf(stdout, "%d:%s: recv_mssg() failed.\n",
world_mpi_rank, fcn_name);
}
- } else if ( ( mssg.req != SYNC_ACK_CODE ) ||
+ } else if ( ( mssg.req != SYNC_ACK_CODE ) ||
( mssg.src != world_server_mpi_rank ) ||
( mssg.dest != world_mpi_rank ) ||
- ( mssg.magic != MSSG_MAGIC ) ) {
+ ( mssg.magic != MSSG_MAGIC ) ) {
nerrors++;
- if ( verbose ) {
+ if ( verbose ) {
HDfprintf(stdout, "%d:%s: Bad data in sync ack.\n",
world_mpi_rank, fcn_name);
}
- }
+ }
}
return;
@@ -945,24 +935,19 @@ do_sync(void)
/*****************************************************************************
*
- * Function: get_max_nerrors()
- *
- * Purpose: Do an MPI_Allreduce to obtain the maximum value of nerrors
- * across all processes. Return this value.
+ * Function: get_max_nerrors()
*
- * Return: Success: Maximum of the nerrors global variables across
- * all processes.
+ * Purpose: Do an MPI_Allreduce to obtain the maximum value of nerrors
+ * across all processes. Return this value.
*
- * Failure: -1
+ * Return: Success: Maximum of the nerrors global variables across
+ * all processes.
*
- * Programmer: JRM -- 1/3/06
+ * Failure: -1
*
- * Modifications:
- *
- * None.
+ * Programmer: JRM -- 1/3/06
*
*****************************************************************************/
-
static int
get_max_nerrors(void)
{
@@ -998,29 +983,29 @@ get_max_nerrors(void)
/*****************************************************************************
*
- * Function: recv_mssg()
+ * Function: recv_mssg()
*
- * Purpose: Receive a message from any process in the provided instance
- * of struct mssg.
+ * Purpose: Receive a message from any process in the provided instance
+ * of struct mssg.
*
- * Return: Success: TRUE
+ * Return: Success: TRUE
*
- * Failure: FALSE
+ * Failure: FALSE
*
- * Programmer: JRM -- 12/22/05
+ * Programmer: JRM -- 12/22/05
*
* Modifications:
*
- * JRM -- 5/10/06
- * Added mssg_tag_offset parameter and supporting code.
+ * JRM -- 5/10/06
+ * Added mssg_tag_offset parameter and supporting code.
*
*****************************************************************************/
-#define CACHE_TEST_TAG 99 /* different from any used by the library */
+#define CACHE_TEST_TAG 99 /* different from any used by the library */
static hbool_t
recv_mssg(struct mssg_t *mssg_ptr,
- int mssg_tag_offset)
+ int mssg_tag_offset)
{
const char * fcn_name = "recv_mssg()";
hbool_t success = TRUE;
@@ -1083,29 +1068,28 @@ recv_mssg(struct mssg_t *mssg_ptr,
/*****************************************************************************
*
- * Function: send_mssg()
+ * Function: send_mssg()
*
- * Purpose: Send the provided instance of mssg to the indicated target.
+ * Purpose: Send the provided instance of mssg to the indicated target.
*
- * Note that all source and destination ranks are in the
- * global communicator.
+ * Note that all source and destination ranks are in the
+ * global communicator.
*
- * Return: Success: TRUE
+ * Return: Success: TRUE
*
- * Failure: FALSE
+ * Failure: FALSE
*
- * Programmer: JRM -- 12/22/05
+ * Programmer: JRM -- 12/22/05
*
* Modifications:
*
- * JRM -- 5/10/06
- * Added the add_req_to_tag parameter and supporting code.
+ * JRM -- 5/10/06
+ * Added the add_req_to_tag parameter and supporting code.
*
*****************************************************************************/
-
static hbool_t
send_mssg(struct mssg_t *mssg_ptr,
- hbool_t add_req_to_tag)
+ hbool_t add_req_to_tag)
{
const char * fcn_name = "send_mssg()";
hbool_t success = TRUE;
@@ -1134,10 +1118,10 @@ send_mssg(struct mssg_t *mssg_ptr,
mssg_ptr->mssg_num = mssg_num++;
- if ( add_req_to_tag ) {
+ if ( add_req_to_tag ) {
- mssg_tag += mssg_ptr->req;
- }
+ mssg_tag += mssg_ptr->req;
+ }
result = MPI_Send((void *)mssg_ptr, 1, mpi_mssg_t,
mssg_ptr->dest, mssg_tag, world_mpi_comm);
@@ -1157,19 +1141,19 @@ send_mssg(struct mssg_t *mssg_ptr,
} /* send_mssg() */
-
+
/*****************************************************************************
*
- * Function: setup_derived_types()
+ * Function: setup_derived_types()
*
- * Purpose: Set up the derived types used by the test bed. At present,
- * only the mpi_mssg derived type is needed.
+ * Purpose: Set up the derived types used by the test bed. At present,
+ * only the mpi_mssg derived type is needed.
*
- * Return: Success: TRUE
+ * Return: Success: TRUE
*
- * Failure: FALSE
+ * Failure: FALSE
*
- * Programmer: JRM -- 12/22/05
+ * Programmer: JRM -- 12/22/05
*
*****************************************************************************/
static hbool_t
@@ -1250,23 +1234,18 @@ setup_derived_types(void)
/*****************************************************************************
*
- * Function: takedown_derived_types()
+ * Function: takedown_derived_types()
*
- * Purpose: take down the derived types used by the test bed. At present,
- * only the mpi_mssg derived type is needed.
+ * Purpose: take down the derived types used by the test bed. At present,
+ * only the mpi_mssg derived type is needed.
*
- * Return: Success: TRUE
+ * Return: Success: TRUE
*
- * Failure: FALSE
+ * Failure: FALSE
*
- * Programmer: JRM -- 12/22/05
- *
- * Modifications:
- *
- * None.
+ * Programmer: JRM -- 12/22/05
*
*****************************************************************************/
-
static hbool_t
takedown_derived_types(void)
{
@@ -1297,23 +1276,18 @@ takedown_derived_types(void)
/*****************************************************************************
*
- * Function: reset_server_counters()
- *
- * Purpose: Reset the counters maintained by the server, doing a
- * sanity check in passing.
+ * Function: reset_server_counters()
*
- * Return: Success: TRUE
+ * Purpose: Reset the counters maintained by the server, doing a
+ * sanity check in passing.
*
- * Failure: FALSE
+ * Return: Success: TRUE
*
- * Programmer: JRM -- 5/5/10
+ * Failure: FALSE
*
- * Modifications:
- *
- * None.
+ * Programmer: JRM -- 5/5/10
*
*****************************************************************************/
-
static hbool_t
reset_server_counters(void)
{
@@ -1344,7 +1318,7 @@ reset_server_counters(void)
nerrors++;
if ( verbose ) {
HDfprintf(stdout, "%d:%s: actual/total reads mismatch (%ld/%ld).\n",
- world_mpi_rank, fcn_name,
+ world_mpi_rank, fcn_name,
actual_total_reads, total_reads);
}
}
@@ -1355,7 +1329,7 @@ reset_server_counters(void)
nerrors++;
if ( verbose ) {
HDfprintf(stdout, "%d:%s: actual/total writes mismatch (%ld/%ld).\n",
- world_mpi_rank, fcn_name,
+ world_mpi_rank, fcn_name,
actual_total_writes, total_writes);
}
}
@@ -1370,28 +1344,27 @@ reset_server_counters(void)
/*****************************************************************************
*
- * Function: server_main()
+ * Function: server_main()
*
- * Purpose: Main function for the server process. This process exists
- * to provide an independant view of the data array.
+ * Purpose: Main function for the server process. This process exists
+ * to provide an independant view of the data array.
*
- * The function handles request from the other processes in
- * the test until the count of done messages received equals
- * the number of client processes.
+ * The function handles request from the other processes in
+ * the test until the count of done messages received equals
+ * the number of client processes.
*
- * Return: Success: TRUE
+ * Return: Success: TRUE
*
- * Failure: FALSE
+ * Failure: FALSE
*
- * Programmer: JRM -- 12/22/05
+ * Programmer: JRM -- 12/22/05
*
* Modifications:
*
- * JRM -- 5/10/06
- * Updated for sync message.
+ * JRM -- 5/10/06
+ * Updated for sync message.
*
*****************************************************************************/
-
static hbool_t
server_main(void)
{
@@ -1420,98 +1393,98 @@ server_main(void)
switch ( mssg.req )
{
- case WRITE_REQ_CODE:
- success = serve_write_request(&mssg);
- break;
+ case WRITE_REQ_CODE:
+ success = serve_write_request(&mssg);
+ break;
- case WRITE_REQ_ACK_CODE:
+ case WRITE_REQ_ACK_CODE:
success = FALSE;
if(verbose)
HDfprintf(stdout, "%s: Received write ack?!?.\n", fcn_name);
- break;
+ break;
- case READ_REQ_CODE:
+ case READ_REQ_CODE:
success = serve_read_request(&mssg);
- break;
+ break;
- case READ_REQ_REPLY_CODE:
+ case READ_REQ_REPLY_CODE:
success = FALSE;
if(verbose)
HDfprintf(stdout, "%s: Received read req reply?!?.\n", fcn_name);
- break;
+ break;
- case SYNC_REQ_CODE:
+ case SYNC_REQ_CODE:
success = serve_sync_request(&mssg);
- break;
+ break;
- case SYNC_ACK_CODE:
+ case SYNC_ACK_CODE:
success = FALSE;
if(verbose)
HDfprintf(stdout, "%s: Received sync ack?!?.\n", fcn_name);
- break;
+ break;
- case REQ_TTL_WRITES_CODE:
- success = serve_total_writes_request(&mssg);
- break;
+ case REQ_TTL_WRITES_CODE:
+ success = serve_total_writes_request(&mssg);
+ break;
- case REQ_TTL_WRITES_RPLY_CODE:
+ case REQ_TTL_WRITES_RPLY_CODE:
success = FALSE;
if(verbose)
HDfprintf(stdout, "%s: Received total writes reply?!?.\n", fcn_name);
- break;
+ break;
- case REQ_TTL_READS_CODE:
- success = serve_total_reads_request(&mssg);
- break;
+ case REQ_TTL_READS_CODE:
+ success = serve_total_reads_request(&mssg);
+ break;
- case REQ_TTL_READS_RPLY_CODE:
+ case REQ_TTL_READS_RPLY_CODE:
success = FALSE;
if(verbose)
HDfprintf(stdout, "%s: Received total reads reply?!?.\n", fcn_name);
- break;
+ break;
- case REQ_ENTRY_WRITES_CODE:
- success = serve_entry_writes_request(&mssg);
- break;
+ case REQ_ENTRY_WRITES_CODE:
+ success = serve_entry_writes_request(&mssg);
+ break;
- case REQ_ENTRY_WRITES_RPLY_CODE:
+ case REQ_ENTRY_WRITES_RPLY_CODE:
success = FALSE;
if(verbose)
HDfprintf(stdout, "%s: Received entry writes reply?!?.\n", fcn_name);
- break;
+ break;
- case REQ_ENTRY_READS_CODE:
- success = serve_entry_reads_request(&mssg);
- break;
+ case REQ_ENTRY_READS_CODE:
+ success = serve_entry_reads_request(&mssg);
+ break;
- case REQ_ENTRY_READS_RPLY_CODE:
+ case REQ_ENTRY_READS_RPLY_CODE:
success = FALSE;
if(verbose)
HDfprintf(stdout, "%s: Received entry reads reply?!?.\n", fcn_name);
- break;
+ break;
- case REQ_RW_COUNT_RESET_CODE:
- success = serve_rw_count_reset_request(&mssg);
- break;
+ case REQ_RW_COUNT_RESET_CODE:
+ success = serve_rw_count_reset_request(&mssg);
+ break;
- case REQ_RW_COUNT_RESET_RPLY_CODE:
+ case REQ_RW_COUNT_RESET_RPLY_CODE:
success = FALSE;
if(verbose)
HDfprintf(stdout, "%s: Received RW count reset reply?!?.\n", fcn_name);
- break;
+ break;
- case DONE_REQ_CODE:
- done_count++;
- if(done_count >= file_mpi_size)
- done = TRUE;
- break;
+ case DONE_REQ_CODE:
+ done_count++;
+ if(done_count >= file_mpi_size)
+ done = TRUE;
+ break;
- default:
+ default:
nerrors++;
success = FALSE;
if(verbose)
- HDfprintf(stdout, "%d:%s: Unknown request code.\n", world_mpi_rank, fcn_name);
- break;
+ HDfprintf(stdout, "%d:%s: Unknown request code.\n", world_mpi_rank, fcn_name);
+ break;
}
}
}
@@ -1520,23 +1493,23 @@ server_main(void)
} /* server_main() */
-
+
/*****************************************************************************
*
- * Function: serve_read_request()
+ * Function: serve_read_request()
*
- * Purpose: Serve a read request.
+ * Purpose: Serve a read request.
*
- * The function accepts a pointer to an instance of struct
- * mssg_t as input. If all sanity checks pass, it sends
- * a copy of the indicated datum from the data array to
- * the requesting process.
+ * The function accepts a pointer to an instance of struct
+ * mssg_t as input. If all sanity checks pass, it sends
+ * a copy of the indicated datum from the data array to
+ * the requesting process.
*
- * Return: Success: TRUE
+ * Return: Success: TRUE
*
- * Failure: FALSE
+ * Failure: FALSE
*
- * Programmer: JRM -- 12/22/05
+ * Programmer: JRM -- 12/22/05
*
*****************************************************************************/
static hbool_t
@@ -1593,8 +1566,8 @@ serve_read_request(struct mssg_t * mssg_ptr)
"%d:%s: proc %d read invalid entry. idx/base_addr = %d/0x%llx.\n",
world_mpi_rank, fcn_name,
mssg_ptr->src,
- target_index,
- (long long)(data[target_index].base_addr));
+ target_index,
+ (long long)(data[target_index].base_addr));
}
} else {
@@ -1606,11 +1579,11 @@ serve_read_request(struct mssg_t * mssg_ptr)
reply.base_addr = data[target_index].base_addr;
reply.len = data[target_index].len;
reply.ver = data[target_index].ver;
- reply.count = 0;
+ reply.count = 0;
reply.magic = MSSG_MAGIC;
- /* and update the counters */
- total_reads++;
+ /* and update the counters */
+ total_reads++;
(data[target_index].reads)++;
}
}
@@ -1625,7 +1598,7 @@ serve_read_request(struct mssg_t * mssg_ptr)
if ( success ) {
HDfprintf(stdout, "%d read 0x%llx. len = %d. ver = %d.\n",
- (int)(mssg_ptr->src),
+ (int)(mssg_ptr->src),
(long long)(data[target_index].base_addr),
(int)(data[target_index].len),
(int)(data[target_index].ver));
@@ -1633,13 +1606,13 @@ serve_read_request(struct mssg_t * mssg_ptr)
} else {
HDfprintf(stdout, "%d read 0x%llx FAILED. len = %d. ver = %d.\n",
- (int)(mssg_ptr->src),
+ (int)(mssg_ptr->src),
(long long)(data[target_index].base_addr),
(int)(data[target_index].len),
(int)(data[target_index].ver));
}
- }
+ }
return(success);
@@ -1648,30 +1621,25 @@ serve_read_request(struct mssg_t * mssg_ptr)
/*****************************************************************************
*
- * Function: serve_sync_request()
- *
- * Purpose: Serve a sync request.
+ * Function: serve_sync_request()
*
- * The function accepts a pointer to an instance of struct
- * mssg_t as input. If all sanity checks pass, it sends a
- * sync ack to the requesting process.
+ * Purpose: Serve a sync request.
*
- * This service exist to allow the sending process to ensure
- * that all previous messages have been processed before
- * proceeding.
+ * The function accepts a pointer to an instance of struct
+ * mssg_t as input. If all sanity checks pass, it sends a
+ * sync ack to the requesting process.
*
- * Return: Success: TRUE
+ * This service exist to allow the sending process to ensure
+ * that all previous messages have been processed before
+ * proceeding.
*
- * Failure: FALSE
+ * Return: Success: TRUE
*
- * Programmer: JRM -- 5/10/06
+ * Failure: FALSE
*
- * Modifications:
- *
- * None.
+ * Programmer: JRM -- 5/10/06
*
*****************************************************************************/
-
static hbool_t
serve_sync_request(struct mssg_t * mssg_ptr)
{
@@ -1702,7 +1670,7 @@ serve_sync_request(struct mssg_t * mssg_ptr)
reply.base_addr = 0;
reply.len = 0;
reply.ver = 0;
- reply.count = 0;
+ reply.count = 0;
reply.magic = MSSG_MAGIC;
}
@@ -1722,29 +1690,29 @@ serve_sync_request(struct mssg_t * mssg_ptr)
HDfprintf(stdout, "%d sync FAILED.\n", (int)(mssg_ptr->src));
}
- }
+ }
return(success);
} /* serve_sync_request() */
-
+
/*****************************************************************************
*
- * Function: serve_write_request()
+ * Function: serve_write_request()
*
- * Purpose: Serve a write request.
+ * Purpose: Serve a write request.
*
- * The function accepts a pointer to an instance of struct
- * mssg_t as input. If all sanity checks pass, it updates
- * the version number of the target data array entry as
- * specified in the message.
+ * The function accepts a pointer to an instance of struct
+ * mssg_t as input. If all sanity checks pass, it updates
+ * the version number of the target data array entry as
+ * specified in the message.
*
- * Return: Success: TRUE
+ * Return: Success: TRUE
*
- * Failure: FALSE
+ * Failure: FALSE
*
- * Programmer: JRM -- 12/21/05
+ * Programmer: JRM -- 12/21/05
*
*****************************************************************************/
static hbool_t
@@ -1803,7 +1771,7 @@ serve_write_request(struct mssg_t * mssg_ptr)
new_ver_num = mssg_ptr->ver;
/* this check should catch duplicate writes */
- if ( new_ver_num <= data[target_index].ver ) {
+ if ( new_ver_num <= data[target_index].ver ) {
nerrors++;
success = FALSE;
@@ -1817,12 +1785,12 @@ serve_write_request(struct mssg_t * mssg_ptr)
if ( success ) {
- /* process the write */
+ /* process the write */
data[target_index].ver = new_ver_num;
data[target_index].valid = TRUE;
/* and update the counters */
- total_writes++;
+ total_writes++;
(data[target_index].writes)++;
#if DO_WRITE_REQ_ACK
@@ -1838,7 +1806,7 @@ serve_write_request(struct mssg_t * mssg_ptr)
reply.count = 0;
reply.magic = MSSG_MAGIC;
- /* and send it */
+ /* and send it */
success = send_mssg(&reply, TRUE);
#endif /* DO_WRITE_REQ_ACK */
@@ -1850,7 +1818,7 @@ serve_write_request(struct mssg_t * mssg_ptr)
if ( success ) {
HDfprintf(stdout, "%d write 0x%llx. len = %d. ver = %d.\n",
- (int)(mssg_ptr->src),
+ (int)(mssg_ptr->src),
(long long)(data[target_index].base_addr),
(int)(data[target_index].len),
(int)(data[target_index].ver));
@@ -1858,36 +1826,36 @@ serve_write_request(struct mssg_t * mssg_ptr)
} else {
HDfprintf(stdout, "%d write 0x%llx FAILED. len = %d. ver = %d.\n",
- (int)(mssg_ptr->src),
+ (int)(mssg_ptr->src),
(long long)(data[target_index].base_addr),
(int)(data[target_index].len),
(int)(data[target_index].ver));
}
- }
+ }
return(success);
} /* serve_write_request() */
-
+
/*****************************************************************************
*
- * Function: serve_total_writes_request()
+ * Function: serve_total_writes_request()
*
- * Purpose: Serve a request for the total number of writes recorded since
- * the last reset.
+ * Purpose: Serve a request for the total number of writes recorded since
+ * the last reset.
*
- * The function accepts a pointer to an instance of struct
- * mssg_t as input. If all sanity checks pass, it sends
- * the current value of the total_writes global variable to
- * the requesting process.
+ * The function accepts a pointer to an instance of struct
+ * mssg_t as input. If all sanity checks pass, it sends
+ * the current value of the total_writes global variable to
+ * the requesting process.
*
- * Return: Success: TRUE
+ * Return: Success: TRUE
*
- * Failure: FALSE
+ * Failure: FALSE
*
- * Programmer: JRM -- 5/5/10
+ * Programmer: JRM -- 5/5/10
*
*****************************************************************************/
static hbool_t
@@ -1934,40 +1902,40 @@ serve_total_writes_request(struct mssg_t * mssg_ptr)
if ( success ) {
HDfprintf(stdout, "%d request total writes %ld.\n",
- (int)(mssg_ptr->src),
+ (int)(mssg_ptr->src),
total_writes);
} else {
HDfprintf(stdout, "%d request total writes %ld -- FAILED.\n",
- (int)(mssg_ptr->src),
+ (int)(mssg_ptr->src),
total_writes);
}
- }
+ }
return(success);
} /* serve_total_writes_request() */
-
+
/*****************************************************************************
*
- * Function: serve_total_reads_request()
+ * Function: serve_total_reads_request()
*
- * Purpose: Serve a request for the total number of reads recorded since
- * the last reset.
+ * Purpose: Serve a request for the total number of reads recorded since
+ * the last reset.
*
- * The function accepts a pointer to an instance of struct
- * mssg_t as input. If all sanity checks pass, it sends
- * the current value of the total_reads global variable to
- * the requesting process.
+ * The function accepts a pointer to an instance of struct
+ * mssg_t as input. If all sanity checks pass, it sends
+ * the current value of the total_reads global variable to
+ * the requesting process.
*
- * Return: Success: TRUE
+ * Return: Success: TRUE
*
- * Failure: FALSE
+ * Failure: FALSE
*
- * Programmer: JRM -- 5/5/10
+ * Programmer: JRM -- 5/5/10
*
*****************************************************************************/
static hbool_t
@@ -2014,40 +1982,40 @@ serve_total_reads_request(struct mssg_t * mssg_ptr)
if ( success ) {
HDfprintf(stdout, "%d request total reads %ld.\n",
- (int)(mssg_ptr->src),
+ (int)(mssg_ptr->src),
total_reads);
} else {
HDfprintf(stdout, "%d request total reads %ld -- FAILED.\n",
- (int)(mssg_ptr->src),
+ (int)(mssg_ptr->src),
total_reads);
}
- }
+ }
return(success);
} /* serve_total_reads_request() */
-
+
/*****************************************************************************
*
- * Function: serve_entry_writes_request()
+ * Function: serve_entry_writes_request()
*
- * Purpose: Serve an entry writes request.
+ * Purpose: Serve an entry writes request.
*
- * The function accepts a pointer to an instance of struct
- * mssg_t as input. If all sanity checks pass, it sends
- * the number of times that the indicated datum has been
- * written since the last counter reset to the requesting
- * process.
+ * The function accepts a pointer to an instance of struct
+ * mssg_t as input. If all sanity checks pass, it sends
+ * the number of times that the indicated datum has been
+ * written since the last counter reset to the requesting
+ * process.
*
- * Return: Success: TRUE
+ * Return: Success: TRUE
*
- * Failure: FALSE
+ * Failure: FALSE
*
- * Programmer: JRM -- 5/5/10
+ * Programmer: JRM -- 5/5/10
*
*****************************************************************************/
static hbool_t
@@ -2095,7 +2063,7 @@ serve_entry_writes_request(struct mssg_t * mssg_ptr)
reply.base_addr = target_addr;
reply.len = 0;
reply.ver = 0;
- reply.count = data[target_index].writes;
+ reply.count = data[target_index].writes;
reply.magic = MSSG_MAGIC;
}
}
@@ -2110,42 +2078,42 @@ serve_entry_writes_request(struct mssg_t * mssg_ptr)
if ( success ) {
HDfprintf(stdout, "%d request entry 0x%llx writes = %ld.\n",
- (int)(mssg_ptr->src),
+ (int)(mssg_ptr->src),
(long long)(data[target_index].base_addr),
(long)(data[target_index].writes));
} else {
HDfprintf(stdout, "%d request entry 0x%llx writes = %ld FAILED.\n",
- (int)(mssg_ptr->src),
+ (int)(mssg_ptr->src),
(long long)(data[target_index].base_addr),
(long)(data[target_index].writes));
}
- }
+ }
return(success);
} /* serve_entry_writes_request() */
-
+
/*****************************************************************************
*
- * Function: serve_entry_reads_request()
+ * Function: serve_entry_reads_request()
*
- * Purpose: Serve an entry reads request.
+ * Purpose: Serve an entry reads request.
*
- * The function accepts a pointer to an instance of struct
- * mssg_t as input. If all sanity checks pass, it sends
- * the number of times that the indicated datum has been
- * read since the last counter reset to the requesting
- * process.
+ * The function accepts a pointer to an instance of struct
+ * mssg_t as input. If all sanity checks pass, it sends
+ * the number of times that the indicated datum has been
+ * read since the last counter reset to the requesting
+ * process.
*
- * Return: Success: TRUE
+ * Return: Success: TRUE
*
- * Failure: FALSE
+ * Failure: FALSE
*
- * Programmer: JRM -- 5/5/10
+ * Programmer: JRM -- 5/5/10
*
*****************************************************************************/
static hbool_t
@@ -2193,7 +2161,7 @@ serve_entry_reads_request(struct mssg_t * mssg_ptr)
reply.base_addr = target_addr;
reply.len = 0;
reply.ver = 0;
- reply.count = (long)(data[target_index].reads);
+ reply.count = (long)(data[target_index].reads);
reply.magic = MSSG_MAGIC;
}
}
@@ -2208,41 +2176,41 @@ serve_entry_reads_request(struct mssg_t * mssg_ptr)
if ( success ) {
HDfprintf(stdout, "%d request entry 0x%llx reads = %ld.\n",
- (int)(mssg_ptr->src),
+ (int)(mssg_ptr->src),
(long long)(data[target_index].base_addr),
(long)(data[target_index].reads));
} else {
HDfprintf(stdout, "%d request entry 0x%llx reads = %ld FAILED.\n",
- (int)(mssg_ptr->src),
+ (int)(mssg_ptr->src),
(long long)(data[target_index].base_addr),
(long)(data[target_index].reads));
}
- }
+ }
return(success);
} /* serve_entry_reads_request() */
-
+
/*****************************************************************************
*
- * Function: serve_rw_count_reset_request()
+ * Function: serve_rw_count_reset_request()
*
- * Purpose: Serve read/write count reset request.
+ * Purpose: Serve read/write count reset request.
*
- * The function accepts a pointer to an instance of struct
- * mssg_t as input. If all sanity checks pass, it resets the
- * read/write counters, and sends a confirmation message to
- * the calling process.
+ * The function accepts a pointer to an instance of struct
+ * mssg_t as input. If all sanity checks pass, it resets the
+ * read/write counters, and sends a confirmation message to
+ * the calling process.
*
- * Return: Success: TRUE
+ * Return: Success: TRUE
*
- * Failure: FALSE
+ * Failure: FALSE
*
- * Programmer: JRM -- 5/5/10
+ * Programmer: JRM -- 5/5/10
*
*****************************************************************************/
static hbool_t
@@ -2268,7 +2236,7 @@ serve_rw_count_reset_request(struct mssg_t * mssg_ptr)
if ( success ) {
success = reset_server_counters();
- }
+ }
if ( success ) {
@@ -2302,7 +2270,7 @@ serve_rw_count_reset_request(struct mssg_t * mssg_ptr)
(int)(mssg_ptr->src));
}
- }
+ }
return(success);
@@ -2313,12 +2281,12 @@ serve_rw_count_reset_request(struct mssg_t * mssg_ptr)
/**************************** Call back functions ****************************/
/*****************************************************************************/
-
+
/*-------------------------------------------------------------------------
* Function: clear_datum
*
* Purpose: Mark the datum as clean and destroy it if requested.
- * Do not write it to the server, or increment the version.
+ * Do not write it to the server, or increment the version.
*
* Return: SUCCEED
*
@@ -2348,7 +2316,7 @@ clear_datum(H5F_t * f,
HDassert( entry_ptr->header.addr == entry_ptr->base_addr );
HDassert( ( entry_ptr->header.size == entry_ptr->len ) ||
- ( entry_ptr->header.size == entry_ptr->local_len ) );
+ ( entry_ptr->header.size == entry_ptr->local_len ) );
HDassert( entry_ptr->header.is_dirty == entry_ptr->dirty );
@@ -2371,20 +2339,20 @@ clear_datum(H5F_t * f,
if ( entry_ptr->header.is_pinned ) {
datum_pinned_clears++;
- HDassert( entry_ptr->global_pinned || entry_ptr->local_pinned );
+ HDassert( entry_ptr->global_pinned || entry_ptr->local_pinned );
}
return(SUCCEED);
} /* clear_datum() */
-
+
/*-------------------------------------------------------------------------
* Function: destroy_datum()
*
* Purpose: Destroy the entry. At present, this means do nothing other
- * than verify that the entry is clean. In particular, do not
- * write it to the server process.
+ * than verify that the entry is clean. In particular, do not
+ * write it to the server process.
*
* Return: SUCCEED
*
@@ -2413,7 +2381,7 @@ destroy_datum(H5F_t H5_ATTR_UNUSED * f,
HDassert( entry_ptr->header.addr == entry_ptr->base_addr );
HDassert( ( entry_ptr->header.size == entry_ptr->len ) ||
- ( entry_ptr->header.size == entry_ptr->local_len ) );
+ ( entry_ptr->header.size == entry_ptr->local_len ) );
HDassert( !(entry_ptr->dirty) );
HDassert( !(entry_ptr->header.is_dirty) );
@@ -2427,12 +2395,12 @@ destroy_datum(H5F_t H5_ATTR_UNUSED * f,
} /* destroy_datum() */
-
+
/*-------------------------------------------------------------------------
* Function: flush_datum
*
* Purpose: Flush the entry to the server process and mark it as clean.
- * Then destroy the entry if requested.
+ * Then destroy the entry if requested.
*
* Return: SUCCEED if successful, and FAIL otherwise.
*
@@ -2464,11 +2432,11 @@ flush_datum(H5F_t *f,
HDassert( f );
HDassert( f->shared );
HDassert( f->shared->cache );
-
+
cache_ptr = f->shared->cache;
HDassert( cache_ptr->magic == H5C__H5C_T_MAGIC );
- HDassert( cache_ptr->aux_ptr );
+ HDassert( cache_ptr->aux_ptr );
aux_ptr = (H5AC_aux_t *)(f->shared->cache->aux_ptr);
@@ -2487,9 +2455,9 @@ flush_datum(H5F_t *f,
HDassert( entry_ptr->header.is_dirty == entry_ptr->dirty );
- if ( ( file_mpi_rank != 0 ) &&
+ if ( ( file_mpi_rank != 0 ) &&
( entry_ptr->dirty ) &&
- ( aux_ptr->metadata_write_strategy ==
+ ( aux_ptr->metadata_write_strategy ==
H5AC_METADATA_WRITE_STRATEGY__PROCESS_0_ONLY ) ) {
ret_value = FAIL;
@@ -2502,7 +2470,7 @@ flush_datum(H5F_t *f,
if ( entry_ptr->header.is_dirty ) {
- was_dirty = TRUE; /* so we will receive the ack if requested */
+ was_dirty = TRUE; /* so we will receive the ack if requested */
/* compose the message */
mssg.req = WRITE_REQ_CODE;
@@ -2675,55 +2643,55 @@ load_datum(H5F_t H5_ATTR_UNUSED *f,
world_mpi_rank, fcn_name);
}
#if 0 /* This has been useful debugging code -- keep it for now. */
- if ( mssg.req != READ_REQ_REPLY_CODE ) {
+ if ( mssg.req != READ_REQ_REPLY_CODE ) {
- HDfprintf(stdout, "%d:%s: mssg.req != READ_REQ_REPLY_CODE.\n",
- world_mpi_rank, fcn_name);
- HDfprintf(stdout, "%d:%s: mssg.req = %d.\n",
- world_mpi_rank, fcn_name, (int)(mssg.req));
- }
+ HDfprintf(stdout, "%d:%s: mssg.req != READ_REQ_REPLY_CODE.\n",
+ world_mpi_rank, fcn_name);
+ HDfprintf(stdout, "%d:%s: mssg.req = %d.\n",
+ world_mpi_rank, fcn_name, (int)(mssg.req));
+ }
- if ( mssg.src != world_server_mpi_rank ) {
+ if ( mssg.src != world_server_mpi_rank ) {
- HDfprintf(stdout, "%d:%s: mssg.src != world_server_mpi_rank.\n",
- world_mpi_rank, fcn_name);
- }
+ HDfprintf(stdout, "%d:%s: mssg.src != world_server_mpi_rank.\n",
+ world_mpi_rank, fcn_name);
+ }
- if ( mssg.dest != world_mpi_rank ) {
+ if ( mssg.dest != world_mpi_rank ) {
- HDfprintf(stdout, "%d:%s: mssg.dest != world_mpi_rank.\n",
- world_mpi_rank, fcn_name);
+ HDfprintf(stdout, "%d:%s: mssg.dest != world_mpi_rank.\n",
+ world_mpi_rank, fcn_name);
}
- if ( mssg.base_addr != entry_ptr->base_addr ) {
+ if ( mssg.base_addr != entry_ptr->base_addr ) {
- HDfprintf(stdout,
- "%d:%s: mssg.base_addr != entry_ptr->base_addr.\n",
- world_mpi_rank, fcn_name);
- HDfprintf(stdout, "%d:%s: mssg.base_addr = %a.\n",
- world_mpi_rank, fcn_name, mssg.base_addr);
- HDfprintf(stdout, "%d:%s: entry_ptr->base_addr = %a.\n",
- world_mpi_rank, fcn_name, entry_ptr->base_addr);
+ HDfprintf(stdout,
+ "%d:%s: mssg.base_addr != entry_ptr->base_addr.\n",
+ world_mpi_rank, fcn_name);
+ HDfprintf(stdout, "%d:%s: mssg.base_addr = %a.\n",
+ world_mpi_rank, fcn_name, mssg.base_addr);
+ HDfprintf(stdout, "%d:%s: entry_ptr->base_addr = %a.\n",
+ world_mpi_rank, fcn_name, entry_ptr->base_addr);
}
- if ( mssg.len != entry_ptr->len ) {
+ if ( mssg.len != entry_ptr->len ) {
- HDfprintf(stdout, "%d:%s: mssg.len != entry_ptr->len.\n",
- world_mpi_rank, fcn_name);
- HDfprintf(stdout, "%d:%s: mssg.len = %a.\n",
- world_mpi_rank, fcn_name, mssg.len);
+ HDfprintf(stdout, "%d:%s: mssg.len != entry_ptr->len.\n",
+ world_mpi_rank, fcn_name);
+ HDfprintf(stdout, "%d:%s: mssg.len = %a.\n",
+ world_mpi_rank, fcn_name, mssg.len);
}
- if ( mssg.ver < entry_ptr->ver ) {
+ if ( mssg.ver < entry_ptr->ver ) {
- HDfprintf(stdout, "%d:%s: mssg.ver < entry_ptr->ver.\n",
- world_mpi_rank, fcn_name);
+ HDfprintf(stdout, "%d:%s: mssg.ver < entry_ptr->ver.\n",
+ world_mpi_rank, fcn_name);
}
- if ( mssg.magic != MSSG_MAGIC ) {
+ if ( mssg.magic != MSSG_MAGIC ) {
- HDfprintf(stdout, "%d:%s: mssg.magic != MSSG_MAGIC.\n",
- world_mpi_rank, fcn_name);
+ HDfprintf(stdout, "%d:%s: mssg.magic != MSSG_MAGIC.\n",
+ world_mpi_rank, fcn_name);
}
#endif /* JRM */
} else {
@@ -2750,7 +2718,7 @@ load_datum(H5F_t H5_ATTR_UNUSED *f,
* Function: size_datum
*
* Purpose: Get the size of the specified entry. Just look at the
- * local copy, as size can't change.
+ * local copy, as size can't change.
*
* Return: SUCCEED
*
@@ -2759,13 +2727,13 @@ load_datum(H5F_t H5_ATTR_UNUSED *f,
*
* Modifications:
*
- * JRM -- 7/11/06
- * Modified function to return the local_len field instead
- * of the len field. These two fields usually contain the
- * same value, but if the size of an entry is changed, we
- * store the altered size in local_len without changing
- * len. Note that local_len must be positive, and may
- * not exceed len.
+ * JRM -- 7/11/06
+ * Modified function to return the local_len field instead
+ * of the len field. These two fields usually contain the
+ * same value, but if the size of an entry is changed, we
+ * store the altered size in local_len without changing
+ * len. Note that local_len must be positive, and may
+ * not exceed len.
*
*-------------------------------------------------------------------------
*/
@@ -2809,21 +2777,16 @@ size_datum(H5F_t H5_ATTR_UNUSED * f,
* Function: expunge_entry()
*
* Purpose: Expunge the entry indicated by the type and index, mark it
- * as clean, and don't increment its version number.
+ * as clean, and don't increment its version number.
*
- * Do nothing if nerrors is non-zero on entry.
+ * Do nothing if nerrors is non-zero on entry.
*
* Return: void
*
* Programmer: John Mainzer
* 07/11/06
*
- * Modifications:
- *
- * None.
- *
*****************************************************************************/
-
static void
expunge_entry(H5F_t * file_ptr,
int32_t idx)
@@ -2846,36 +2809,36 @@ expunge_entry(H5F_t * file_ptr,
if ( nerrors == 0 ) {
result = H5AC_expunge_entry(file_ptr, (hid_t)-1, &(types[0]),
- entry_ptr->header.addr, H5AC__NO_FLAGS_SET);
+ entry_ptr->header.addr, H5AC__NO_FLAGS_SET);
if ( result < 0 ) {
nerrors++;
if ( verbose ) {
- HDfprintf(stdout, "%d:%s: Error in H5AC_expunge_entry().\n",
- world_mpi_rank, fcn_name);
+ HDfprintf(stdout, "%d:%s: Error in H5AC_expunge_entry().\n",
+ world_mpi_rank, fcn_name);
}
}
HDassert( ((entry_ptr->header).type)->id == DATUM_ENTRY_TYPE );
- HDassert( ! ((entry_ptr->header).is_dirty) );
+ HDassert( ! ((entry_ptr->header).is_dirty) );
- result = H5C_get_entry_status(file_ptr, entry_ptr->base_addr,
- NULL, &in_cache, NULL, NULL, NULL);
+ result = H5C_get_entry_status(file_ptr, entry_ptr->base_addr,
+ NULL, &in_cache, NULL, NULL, NULL);
- if ( result < 0 ) {
+ if ( result < 0 ) {
nerrors++;
if ( verbose ) {
- HDfprintf(stdout, "%d:%s: Error in H5C_get_entry_status().\n",
- world_mpi_rank, fcn_name);
+ HDfprintf(stdout, "%d:%s: Error in H5C_get_entry_status().\n",
+ world_mpi_rank, fcn_name);
}
} else if ( in_cache ) {
nerrors++;
if ( verbose ) {
- HDfprintf(stdout, "%d:%s: Expunged entry still in cache?!?\n",
- world_mpi_rank, fcn_name);
+ HDfprintf(stdout, "%d:%s: Expunged entry still in cache?!?\n",
+ world_mpi_rank, fcn_name);
}
}
}
@@ -2889,9 +2852,9 @@ expunge_entry(H5F_t * file_ptr,
* Function: insert_entry()
*
* Purpose: Insert the entry indicated by the type and index, mark it
- * as dirty, and increment its version number.
+ * as dirty, and increment its version number.
*
- * Do nothing if nerrors is non-zero on entry.
+ * Do nothing if nerrors is non-zero on entry.
*
* Return: void
*
@@ -2906,7 +2869,6 @@ expunge_entry(H5F_t * file_ptr,
* any pins must be global pins.
*
*****************************************************************************/
-
static void
insert_entry(H5C_t * cache_ptr,
H5F_t * file_ptr,
@@ -2944,33 +2906,33 @@ insert_entry(H5C_t * cache_ptr,
nerrors++;
if ( verbose ) {
- HDfprintf(stdout, "%d:%s: Error in H5AC_insert_entry().\n",
- world_mpi_rank, fcn_name);
+ HDfprintf(stdout, "%d:%s: Error in H5AC_insert_entry().\n",
+ world_mpi_rank, fcn_name);
}
}
if ( ! (entry_ptr->header.is_dirty) ) {
- /* it is possible that we just exceeded the dirty bytes
- * threshold, triggering a write of the newly inserted
- * entry. Test for this, and only flag an error if this
- * is not the case.
- */
+ /* it is possible that we just exceeded the dirty bytes
+ * threshold, triggering a write of the newly inserted
+ * entry. Test for this, and only flag an error if this
+ * is not the case.
+ */
- struct H5AC_aux_t * aux_ptr;
+ struct H5AC_aux_t * aux_ptr;
- aux_ptr = ((H5AC_aux_t *)(cache_ptr->aux_ptr));
+ aux_ptr = ((H5AC_aux_t *)(cache_ptr->aux_ptr));
- if ( ! ( ( aux_ptr != NULL ) &&
- ( aux_ptr->magic == H5AC__H5AC_AUX_T_MAGIC ) &&
- ( aux_ptr->dirty_bytes == 0 ) ) ) {
+ if ( ! ( ( aux_ptr != NULL ) &&
+ ( aux_ptr->magic == H5AC__H5AC_AUX_T_MAGIC ) &&
+ ( aux_ptr->dirty_bytes == 0 ) ) ) {
nerrors++;
if ( verbose ) {
- HDfprintf(stdout, "%d:%s: data[%d].header.is_dirty = %d.\n",
- world_mpi_rank, fcn_name, idx,
+ HDfprintf(stdout, "%d:%s: data[%d].header.is_dirty = %d.\n",
+ world_mpi_rank, fcn_name, idx,
(int)(data[idx].header.is_dirty));
- }
+ }
}
}
@@ -2978,7 +2940,7 @@ insert_entry(H5C_t * cache_ptr,
HDassert( entry_ptr->header.is_pinned );
entry_ptr->global_pinned = TRUE;
- global_pins++;
+ global_pins++;
} else {
@@ -3009,16 +2971,13 @@ insert_entry(H5C_t * cache_ptr,
* Programmer: John Mainzer
* 4/12/06
*
- * Modifications:
- *
*****************************************************************************/
-
static void
local_pin_and_unpin_random_entries(H5F_t * file_ptr,
int min_idx,
int max_idx,
- int min_count,
- int max_count)
+ int min_count,
+ int max_count)
{
/* const char * fcn_name = "local_pin_and_unpin_random_entries()"; */
@@ -3034,40 +2993,40 @@ local_pin_and_unpin_random_entries(H5F_t * file_ptr,
HDassert( min_idx < max_idx );
HDassert( max_idx < NUM_DATA_ENTRIES );
HDassert( max_idx < virt_num_data_entries );
- HDassert( 0 <= min_count );
- HDassert( min_count < max_count );
+ HDassert( 0 <= min_count );
+ HDassert( min_count < max_count );
- count = (HDrand() % (max_count - min_count)) + min_count;
+ count = (HDrand() % (max_count - min_count)) + min_count;
- HDassert( min_count <= count );
- HDassert( count <= max_count );
+ HDassert( min_count <= count );
+ HDassert( count <= max_count );
- for ( i = 0; i < count; i++ )
- {
+ for ( i = 0; i < count; i++ )
+ {
local_pin_random_entry(file_ptr, min_idx, max_idx);
- }
+ }
- count = (HDrand() % (max_count - min_count)) + min_count;
+ count = (HDrand() % (max_count - min_count)) + min_count;
- HDassert( min_count <= count );
- HDassert( count <= max_count );
+ HDassert( min_count <= count );
+ HDassert( count <= max_count );
i = 0;
- idx = 0;
+ idx = 0;
- while ( ( i < count ) && ( idx >= 0 ) )
- {
- via_unprotect = ( (((unsigned)i) & 0x0001) == 0 );
- idx = local_unpin_next_pinned_entry(file_ptr, idx, via_unprotect);
- i++;
- }
+ while ( ( i < count ) && ( idx >= 0 ) )
+ {
+ via_unprotect = ( (((unsigned)i) & 0x0001) == 0 );
+ idx = local_unpin_next_pinned_entry(file_ptr, idx, via_unprotect);
+ i++;
+ }
}
return;
} /* local_pin_and_unpin_random_entries() */
-
+
/*****************************************************************************
* Function: local_pin_random_entry()
*
@@ -3100,13 +3059,13 @@ local_pin_random_entry(H5F_t * file_ptr,
HDassert( max_idx < NUM_DATA_ENTRIES );
HDassert( max_idx < virt_num_data_entries );
- do
- {
- idx = (HDrand() % (max_idx - min_idx)) + min_idx;
+ do
+ {
+ idx = (HDrand() % (max_idx - min_idx)) + min_idx;
HDassert( min_idx <= idx );
HDassert( idx <= max_idx );
- }
- while ( data[idx].global_pinned || data[idx].local_pinned );
+ }
+ while ( data[idx].global_pinned || data[idx].local_pinned );
pin_entry(file_ptr, idx, FALSE, FALSE);
}
@@ -3128,13 +3087,10 @@ local_pin_random_entry(H5F_t * file_ptr,
* Programmer: John Mainzer
* 4/12/06
*
- * Modifications:
- *
*****************************************************************************/
-
static void
local_unpin_all_entries(H5F_t * file_ptr,
- hbool_t via_unprotect)
+ hbool_t via_unprotect)
{
/* const char * fcn_name = "local_unpin_all_entries()"; */
@@ -3144,13 +3100,13 @@ local_unpin_all_entries(H5F_t * file_ptr,
HDassert( file_ptr );
- idx = 0;
+ idx = 0;
- while ( idx >= 0 )
- {
- idx = local_unpin_next_pinned_entry(file_ptr,
- idx, via_unprotect);
- }
+ while ( idx >= 0 )
+ {
+ idx = local_unpin_next_pinned_entry(file_ptr,
+ idx, via_unprotect);
+ }
}
return;
@@ -3162,7 +3118,7 @@ local_unpin_all_entries(H5F_t * file_ptr,
* Function: local_unpin_next_pinned_entry()
*
* Purpose: Find the next locally pinned entry after the specified
- * starting point, and unpin it.
+ * starting point, and unpin it.
*
* Do nothing if nerrors is non-zero on entry.
*
@@ -3173,14 +3129,11 @@ local_unpin_all_entries(H5F_t * file_ptr,
* Programmer: John Mainzer
* 4/12/06
*
- * Modifications:
- *
*****************************************************************************/
-
static int
local_unpin_next_pinned_entry(H5F_t * file_ptr,
int start_idx,
- hbool_t via_unprotect)
+ hbool_t via_unprotect)
{
/* const char * fcn_name = "local_unpin_next_pinned_entry()"; */
int i = 0;
@@ -3193,26 +3146,26 @@ local_unpin_next_pinned_entry(H5F_t * file_ptr,
HDassert( start_idx < NUM_DATA_ENTRIES );
HDassert( start_idx < virt_num_data_entries );
- idx = start_idx;
+ idx = start_idx;
- while ( ( i < virt_num_data_entries ) &&
- ( ! ( data[idx].local_pinned ) ) )
- {
- i++;
- idx++;
- if ( idx >= virt_num_data_entries ) {
- idx = 0;
- }
- }
+ while ( ( i < virt_num_data_entries ) &&
+ ( ! ( data[idx].local_pinned ) ) )
+ {
+ i++;
+ idx++;
+ if ( idx >= virt_num_data_entries ) {
+ idx = 0;
+ }
+ }
- if ( data[idx].local_pinned ) {
+ if ( data[idx].local_pinned ) {
- unpin_entry(file_ptr, idx, FALSE, FALSE, via_unprotect);
+ unpin_entry(file_ptr, idx, FALSE, FALSE, via_unprotect);
- } else {
+ } else {
- idx = -1;
- }
+ idx = -1;
+ }
}
return(idx);
@@ -3224,8 +3177,8 @@ local_unpin_next_pinned_entry(H5F_t * file_ptr,
* Function: lock_and_unlock_random_entries()
*
* Purpose: Obtain a random number in the closed interval [min_count,
- * max_count]. Then protect and unprotect that number of
- * random entries.
+ * max_count]. Then protect and unprotect that number of
+ * random entries.
*
* Do nothing if nerrors is non-zero on entry.
*
@@ -3234,10 +3187,7 @@ local_unpin_next_pinned_entry(H5F_t * file_ptr,
* Programmer: John Mainzer
* 1/12/06
*
- * Modifications:
- *
*****************************************************************************/
-
static void
lock_and_unlock_random_entries(H5F_t * file_ptr,
int min_idx,
@@ -3275,7 +3225,7 @@ lock_and_unlock_random_entries(H5F_t * file_ptr,
* Function: lock_and_unlock_random_entry()
*
* Purpose: Protect and then unprotect a random entry with index in
- * the data[] array in the close interval [min_idx, max_idx].
+ * the data[] array in the close interval [min_idx, max_idx].
*
* Do nothing if nerrors is non-zero on entry.
*
@@ -3284,10 +3234,7 @@ lock_and_unlock_random_entries(H5F_t * file_ptr,
* Programmer: John Mainzer
* 1/4/06
*
- * Modifications:
- *
*****************************************************************************/
-
static void
lock_and_unlock_random_entry(H5F_t * file_ptr,
int min_idx,
@@ -3309,8 +3256,8 @@ lock_and_unlock_random_entry(H5F_t * file_ptr,
HDassert( min_idx <= idx );
HDassert( idx <= max_idx );
- lock_entry(file_ptr, idx);
- unlock_entry(file_ptr, idx, H5AC__NO_FLAGS_SET);
+ lock_entry(file_ptr, idx);
+ unlock_entry(file_ptr, idx, H5AC__NO_FLAGS_SET);
}
return;
@@ -3332,12 +3279,11 @@ lock_and_unlock_random_entry(H5F_t * file_ptr,
*
* Modifications:
*
- * JRM -- 7/11/06
- * Modified asserts to handle the new local_len field in
- * datum.
+ * JRM -- 7/11/06
+ * Modified asserts to handle the new local_len field in
+ * datum.
*
*****************************************************************************/
-
static void
lock_entry(H5F_t * file_ptr,
int32_t idx)
@@ -3353,7 +3299,7 @@ lock_entry(H5F_t * file_ptr,
entry_ptr = &(data[idx]);
- HDassert( ! (entry_ptr->locked) );
+ HDassert( ! (entry_ptr->locked) );
cache_entry_ptr = (H5C_cache_entry_t *)H5AC_protect(file_ptr, -1, &(types[0]),
entry_ptr->base_addr, NULL, H5AC_WRITE);
@@ -3361,19 +3307,19 @@ lock_entry(H5F_t * file_ptr,
if ( ( cache_entry_ptr != (void *)(&(entry_ptr->header)) ) ||
( entry_ptr->header.type != &(types[0]) ) ||
( ( entry_ptr->len != entry_ptr->header.size ) &&
- ( entry_ptr->local_len != entry_ptr->header.size ) ) ||
+ ( entry_ptr->local_len != entry_ptr->header.size ) ) ||
( entry_ptr->base_addr != entry_ptr->header.addr ) ) {
nerrors++;
if ( verbose ) {
- HDfprintf(stdout, "%d:%s: error in H5AC_protect().\n",
- world_mpi_rank, fcn_name);
+ HDfprintf(stdout, "%d:%s: error in H5AC_protect().\n",
+ world_mpi_rank, fcn_name);
}
} else {
- entry_ptr->locked = TRUE;
+ entry_ptr->locked = TRUE;
- }
+ }
HDassert( ((entry_ptr->header).type)->id == DATUM_ENTRY_TYPE );
}
@@ -3396,7 +3342,6 @@ lock_entry(H5F_t * file_ptr,
* 4/14/06
*
*****************************************************************************/
-
static void
mark_entry_dirty(int32_t idx)
{
@@ -3412,26 +3357,26 @@ mark_entry_dirty(int32_t idx)
entry_ptr = &(data[idx]);
HDassert ( entry_ptr->locked || entry_ptr->global_pinned );
- HDassert ( ! (entry_ptr->local_pinned) );
+ HDassert ( ! (entry_ptr->local_pinned) );
(entry_ptr->ver)++;
entry_ptr->dirty = TRUE;
- result = H5AC_mark_entry_dirty( (void *)entry_ptr);
+ result = H5AC_mark_entry_dirty( (void *)entry_ptr);
if ( result < 0 ) {
nerrors++;
if ( verbose ) {
- HDfprintf(stdout,
+ HDfprintf(stdout,
"%d:%s: error in H5AC_mark_entry_dirty().\n",
world_mpi_rank, fcn_name);
}
}
- else if ( ! ( entry_ptr->locked ) )
- {
- global_dirty_pins++;
- }
+ else if ( ! ( entry_ptr->locked ) )
+ {
+ global_dirty_pins++;
+ }
}
return;
@@ -3451,15 +3396,12 @@ mark_entry_dirty(int32_t idx)
* Programmer: John Mainzer
* 4/11/06
*
- * Modifications:
- *
*****************************************************************************/
-
static void
pin_entry(H5F_t * file_ptr,
int32_t idx,
- hbool_t global,
- hbool_t dirty)
+ hbool_t global,
+ hbool_t dirty)
{
/* const char * fcn_name = "pin_entry()"; */
unsigned int flags = H5AC__PIN_ENTRY_FLAG;
@@ -3473,35 +3415,35 @@ pin_entry(H5F_t * file_ptr,
entry_ptr = &(data[idx]);
- HDassert ( ! (entry_ptr->global_pinned) );
- HDassert ( ! (entry_ptr->local_pinned) );
- HDassert ( ! ( dirty && ( ! global ) ) );
+ HDassert ( ! (entry_ptr->global_pinned) );
+ HDassert ( ! (entry_ptr->local_pinned) );
+ HDassert ( ! ( dirty && ( ! global ) ) );
- lock_entry(file_ptr, idx);
+ lock_entry(file_ptr, idx);
- if ( dirty ) {
+ if ( dirty ) {
- flags |= H5AC__DIRTIED_FLAG;
- }
+ flags |= H5AC__DIRTIED_FLAG;
+ }
- unlock_entry(file_ptr, idx, flags);
+ unlock_entry(file_ptr, idx, flags);
HDassert( (entry_ptr->header).is_pinned );
- HDassert( ( ! dirty ) || ( (entry_ptr->header).is_dirty ) );
+ HDassert( ( ! dirty ) || ( (entry_ptr->header).is_dirty ) );
- if ( global ) {
+ if ( global ) {
- entry_ptr->global_pinned = TRUE;
+ entry_ptr->global_pinned = TRUE;
- global_pins++;
+ global_pins++;
- } else {
+ } else {
- entry_ptr->local_pinned = TRUE;
+ entry_ptr->local_pinned = TRUE;
- local_pins++;
+ local_pins++;
- }
+ }
}
return;
@@ -3514,24 +3456,19 @@ pin_entry(H5F_t * file_ptr,
* Function: pin_protected_entry()
*
* Purpose: Insert the entry indicated by the type and index, mark it
- * as dirty, and increment its version number.
+ * as dirty, and increment its version number.
*
- * Do nothing if nerrors is non-zero on entry.
+ * Do nothing if nerrors is non-zero on entry.
*
* Return: void
*
* Programmer: John Mainzer
* 01/04/06
*
- * Modifications:
- *
- * None.
- *
*****************************************************************************/
-
static void
pin_protected_entry(int32_t idx,
- hbool_t global)
+ hbool_t global)
{
const char * fcn_name = "pin_protected_entry()";
herr_t result;
@@ -3546,36 +3483,36 @@ pin_protected_entry(int32_t idx,
if ( nerrors == 0 ) {
- result = H5AC_pin_protected_entry((void *)entry_ptr);
+ result = H5AC_pin_protected_entry((void *)entry_ptr);
if ( ( result < 0 ) ||
( entry_ptr->header.type != &(types[0]) ) ||
( ( entry_ptr->len != entry_ptr->header.size ) &&
- ( entry_ptr->local_len != entry_ptr->header.size ) )||
+ ( entry_ptr->local_len != entry_ptr->header.size ) )||
( entry_ptr->base_addr != entry_ptr->header.addr ) ||
- ( ! ( (entry_ptr->header).is_pinned ) ) ) {
+ ( ! ( (entry_ptr->header).is_pinned ) ) ) {
nerrors++;
if ( verbose ) {
- HDfprintf(stdout,
- "%d:%s: Error in H5AC_pin_protected entry().\n",
- world_mpi_rank, fcn_name);
+ HDfprintf(stdout,
+ "%d:%s: Error in H5AC_pin_protected entry().\n",
+ world_mpi_rank, fcn_name);
}
}
if ( global ) {
- entry_ptr->global_pinned = TRUE;
+ entry_ptr->global_pinned = TRUE;
- global_pins++;
+ global_pins++;
- } else {
+ } else {
- entry_ptr->local_pinned = TRUE;
+ entry_ptr->local_pinned = TRUE;
- local_pins++;
+ local_pins++;
- }
+ }
HDassert( ((entry_ptr->header).type)->id == DATUM_ENTRY_TYPE );
}
@@ -3585,16 +3522,16 @@ pin_protected_entry(int32_t idx,
} /* pin_protected_entry() */
#endif /* H5_METADATA_TRACE_FILE */
-
+
/*****************************************************************************
* Function: move_entry()
*
* Purpose: Move the entry indicated old_idx to the entry indicated
- * by new_idex. Touch up the data array so that flush will
- * not choke.
+ * by new_idex. Touch up the data array so that flush will
+ * not choke.
*
- * Do nothing if nerrors isn't zero, or if old_idx equals
- * new_idx.
+ * Do nothing if nerrors isn't zero, or if old_idx equals
+ * new_idx.
*
* Return: void
*
@@ -3609,8 +3546,8 @@ move_entry(H5F_t * file_ptr,
{
const char * fcn_name = "move_entry()";
herr_t result;
- int tmp;
- size_t tmp_len;
+ int tmp;
+ size_t tmp_len;
haddr_t old_addr = HADDR_UNDEF;
haddr_t new_addr = HADDR_UNDEF;
struct datum * old_entry_ptr;
@@ -3638,12 +3575,12 @@ move_entry(H5F_t * file_ptr,
/* Moving will mark the entry dirty if it is not already */
old_entry_ptr->dirty = TRUE;
- /* touch up versions, base_addrs, and data_index. Do this
- * now as it is possible that the rename will trigger a
+ /* touch up versions, base_addrs, and data_index. Do this
+ * now as it is possible that the rename will trigger a
* sync point.
*/
if(old_entry_ptr->ver < new_entry_ptr->ver)
- old_entry_ptr->ver = new_entry_ptr->ver;
+ old_entry_ptr->ver = new_entry_ptr->ver;
else
(old_entry_ptr->ver)++;
@@ -3657,11 +3594,11 @@ move_entry(H5F_t * file_ptr,
old_entry_ptr->index = new_entry_ptr->index;
new_entry_ptr->index = tmp;
- if(old_entry_ptr->local_len != new_entry_ptr->local_len) {
- tmp_len = old_entry_ptr->local_len;
- old_entry_ptr->local_len = new_entry_ptr->local_len;
- new_entry_ptr->local_len = tmp_len;
- } /* end if */
+ if(old_entry_ptr->local_len != new_entry_ptr->local_len) {
+ tmp_len = old_entry_ptr->local_len;
+ old_entry_ptr->local_len = new_entry_ptr->local_len;
+ new_entry_ptr->local_len = tmp_len;
+ } /* end if */
result = H5AC_move_entry(file_ptr, &(types[0]), old_addr, new_addr);
@@ -3669,8 +3606,8 @@ move_entry(H5F_t * file_ptr,
nerrors++;
if ( verbose ) {
- HDfprintf(stdout, "%d:%s: H5AC_move_entry() failed.\n",
- world_mpi_rank, fcn_name);
+ HDfprintf(stdout, "%d:%s: H5AC_move_entry() failed.\n",
+ world_mpi_rank, fcn_name);
}
} else {
@@ -3679,27 +3616,27 @@ move_entry(H5F_t * file_ptr,
if ( ! (old_entry_ptr->header.is_dirty) ) {
- /* it is possible that we just exceeded the dirty bytes
- * threshold, triggering a write of the newly inserted
- * entry. Test for this, and only flag an error if this
- * is not the case.
- */
+ /* it is possible that we just exceeded the dirty bytes
+ * threshold, triggering a write of the newly inserted
+ * entry. Test for this, and only flag an error if this
+ * is not the case.
+ */
- struct H5AC_aux_t * aux_ptr;
+ struct H5AC_aux_t * aux_ptr;
- aux_ptr = ((H5AC_aux_t *)(file_ptr->shared->cache->aux_ptr));
+ aux_ptr = ((H5AC_aux_t *)(file_ptr->shared->cache->aux_ptr));
- if ( ! ( ( aux_ptr != NULL ) &&
- ( aux_ptr->magic == H5AC__H5AC_AUX_T_MAGIC ) &&
- ( aux_ptr->dirty_bytes == 0 ) ) ) {
+ if ( ! ( ( aux_ptr != NULL ) &&
+ ( aux_ptr->magic == H5AC__H5AC_AUX_T_MAGIC ) &&
+ ( aux_ptr->dirty_bytes == 0 ) ) ) {
nerrors++;
if ( verbose ) {
- HDfprintf(stdout,
+ HDfprintf(stdout,
"%d:%s: data[%d].header.is_dirty = %d.\n",
- world_mpi_rank, fcn_name, new_idx,
+ world_mpi_rank, fcn_name, new_idx,
(int)(data[new_idx].header.is_dirty));
- }
+ }
}
} else {
@@ -3710,19 +3647,19 @@ move_entry(H5F_t * file_ptr,
} /* move_entry() */
-
+
/*****************************************************************************
*
- * Function: reset_server_counts()
+ * Function: reset_server_counts()
*
- * Purpose: Send a message to the server process requesting it to reset
- * its counters. Await confirmation message.
+ * Purpose: Send a message to the server process requesting it to reset
+ * its counters. Await confirmation message.
*
- * Return: Success: TRUE
+ * Return: Success: TRUE
*
- * Failure: FALSE
+ * Failure: FALSE
*
- * Programmer: JRM -- 5/6/10
+ * Programmer: JRM -- 5/6/10
*
*****************************************************************************/
static hbool_t
@@ -3778,7 +3715,7 @@ reset_server_counts(void)
nerrors++;
success = FALSE;
if ( verbose ) {
- HDfprintf(stdout,
+ HDfprintf(stdout,
"%d:%s: Bad data in req r/w counter reset reply.\n",
world_mpi_rank, fcn_name);
}
@@ -3794,25 +3731,20 @@ reset_server_counts(void)
* Function: resize_entry()
*
* Purpose: Resize the pinned entry indicated by idx to the new_size.
- * Note that new_size must be greater than 0, and must be
- * less than or equal to the original size of the entry.
+ * Note that new_size must be greater than 0, and must be
+ * less than or equal to the original size of the entry.
*
- * Do nothing if nerrors isn't zero.
+ * Do nothing if nerrors isn't zero.
*
* Return: void
*
* Programmer: John Mainzer
* 7/11/06
*
- * Modifications:
- *
- * None
- *
*****************************************************************************/
-
static void
resize_entry(int32_t idx,
- size_t new_size)
+ size_t new_size)
{
const char * fcn_name = "resize_entry()";
herr_t result;
@@ -3827,21 +3759,21 @@ resize_entry(int32_t idx,
HDassert( ((entry_ptr->header).type)->id == DATUM_ENTRY_TYPE );
HDassert( !(entry_ptr->locked) );
- HDassert( ( entry_ptr->global_pinned ) &&
- ( ! entry_ptr->local_pinned ) );
- HDassert( ( entry_ptr->header.size == entry_ptr->len ) ||
- ( entry_ptr->header.size == entry_ptr->local_len ) );
- HDassert( new_size > 0 );
- HDassert( new_size <= entry_ptr->len );
+ HDassert( ( entry_ptr->global_pinned ) &&
+ ( ! entry_ptr->local_pinned ) );
+ HDassert( ( entry_ptr->header.size == entry_ptr->len ) ||
+ ( entry_ptr->header.size == entry_ptr->local_len ) );
+ HDassert( new_size > 0 );
+ HDassert( new_size <= entry_ptr->len );
- result = H5AC_resize_entry((void *)entry_ptr, new_size);
+ result = H5AC_resize_entry((void *)entry_ptr, new_size);
if ( result < 0 ) {
nerrors++;
if ( verbose ) {
- HDfprintf(stdout, "%d:%s: H5AC_resize_entry() failed.\n",
- world_mpi_rank, fcn_name);
+ HDfprintf(stdout, "%d:%s: H5AC_resize_entry() failed.\n",
+ world_mpi_rank, fcn_name);
}
} else {
@@ -3851,7 +3783,7 @@ resize_entry(int32_t idx,
HDassert( entry_ptr->header.size == new_size );
entry_ptr->dirty = TRUE;
- entry_ptr->local_len = new_size;
+ entry_ptr->local_len = new_size;
/* touch up version. */
@@ -3863,24 +3795,24 @@ resize_entry(int32_t idx,
} /* resize_entry() */
-
+
/*****************************************************************************
*
- * Function: setup_cache_for_test()
+ * Function: setup_cache_for_test()
*
- * Purpose: Setup the parallel cache for a test, and return the file id
- * and a pointer to the cache's internal data structures.
+ * Purpose: Setup the parallel cache for a test, and return the file id
+ * and a pointer to the cache's internal data structures.
*
- * To do this, we must create a file, flush it (so that we
- * don't have to worry about entries in the metadata cache),
- * look up the address of the metadata cache, and then instruct
- * the cache to omit sanity checks on dxpl IDs.
+ * To do this, we must create a file, flush it (so that we
+ * don't have to worry about entries in the metadata cache),
+ * look up the address of the metadata cache, and then instruct
+ * the cache to omit sanity checks on dxpl IDs.
*
- * Return: Success: TRUE
+ * Return: Success: TRUE
*
- * Failure: FALSE
+ * Failure: FALSE
*
- * Programmer: JRM -- 1/4/06
+ * Programmer: JRM -- 1/4/06
*
*****************************************************************************/
static hbool_t
@@ -3907,13 +3839,13 @@ setup_cache_for_test(hid_t * fid_ptr,
if ( fid < 0 ) {
nerrors++;
if ( verbose ) {
- HDfprintf(stdout, "%d:%s: H5Fcreate() failed.\n",
+ HDfprintf(stdout, "%d:%s: H5Fcreate() failed.\n",
world_mpi_rank, fcn_name);
}
} else if ( H5Fflush(fid, H5F_SCOPE_GLOBAL) < 0 ) {
nerrors++;
if ( verbose ) {
- HDfprintf(stdout, "%d:%s: H5Fflush() failed.\n",
+ HDfprintf(stdout, "%d:%s: H5Fflush() failed.\n",
world_mpi_rank, fcn_name);
}
} else {
@@ -3923,7 +3855,7 @@ setup_cache_for_test(hid_t * fid_ptr,
if ( file_ptr == NULL ) {
nerrors++;
if ( verbose ) {
- HDfprintf(stdout, "%d:%s: Can't get file_ptr.\n",
+ HDfprintf(stdout, "%d:%s: Can't get file_ptr.\n",
world_mpi_rank, fcn_name);
}
} else {
@@ -3933,13 +3865,13 @@ setup_cache_for_test(hid_t * fid_ptr,
if ( cache_ptr == NULL ) {
nerrors++;
if ( verbose ) {
- HDfprintf(stdout, "%d:%s: Can't get cache_ptr.\n",
+ HDfprintf(stdout, "%d:%s: Can't get cache_ptr.\n",
world_mpi_rank, fcn_name);
}
} else if ( cache_ptr->magic != H5C__H5C_T_MAGIC ) {
nerrors++;
if ( verbose ) {
- HDfprintf(stdout, "%d:%s: Bad cache_ptr magic.\n",
+ HDfprintf(stdout, "%d:%s: Bad cache_ptr magic.\n",
world_mpi_rank, fcn_name);
}
} else {
@@ -3957,7 +3889,7 @@ setup_cache_for_test(hid_t * fid_ptr,
if ( H5AC_get_cache_auto_resize_config(cache_ptr, &config)
!= SUCCEED ) {
- HDfprintf(stdout,
+ HDfprintf(stdout,
"%d:%s: H5AC_get_cache_auto_resize_config(1) failed.\n",
world_mpi_rank, fcn_name);
@@ -3967,9 +3899,9 @@ setup_cache_for_test(hid_t * fid_ptr,
config.metadata_write_strategy = metadata_write_strategy;
if ( H5AC_set_cache_auto_resize_config(cache_ptr, &config)
- != SUCCEED ) {
+ != SUCCEED ) {
- HDfprintf(stdout,
+ HDfprintf(stdout,
"%d:%s: H5AC_set_cache_auto_resize_config() failed.\n",
world_mpi_rank, fcn_name);
@@ -3992,15 +3924,15 @@ setup_cache_for_test(hid_t * fid_ptr,
nerrors++;
if ( verbose ) {
- HDfprintf(stdout, "%d:%s: cache_ptr->aux_ptr == NULL.\n",
+ HDfprintf(stdout, "%d:%s: cache_ptr->aux_ptr == NULL.\n",
world_mpi_rank, fcn_name);
}
- } else if ( ((H5AC_aux_t *)(cache_ptr->aux_ptr))->magic !=
+ } else if ( ((H5AC_aux_t *)(cache_ptr->aux_ptr))->magic !=
H5AC__H5AC_AUX_T_MAGIC ) {
nerrors++;
if ( verbose ) {
- HDfprintf(stdout,
+ HDfprintf(stdout,
"%d:%s: cache_ptr->aux_ptr->magic != H5AC__H5AC_AUX_T_MAGIC.\n",
world_mpi_rank, fcn_name);
}
@@ -4009,14 +3941,14 @@ setup_cache_for_test(hid_t * fid_ptr,
nerrors++;
if ( verbose ) {
- HDfprintf(stdout,
+ HDfprintf(stdout,
"%d:%s: bad cache_ptr->aux_ptr->metadata_write_strategy\n",
world_mpi_rank, fcn_name);
}
}
}
- /* also verify that the expected metadata write strategy is reported
+ /* also verify that the expected metadata write strategy is reported
* when we get the current configuration.
*/
@@ -4027,18 +3959,18 @@ setup_cache_for_test(hid_t * fid_ptr,
if ( H5AC_get_cache_auto_resize_config(cache_ptr, &test_config)
!= SUCCEED ) {
- HDfprintf(stdout,
+ HDfprintf(stdout,
"%d:%s: H5AC_get_cache_auto_resize_config(2) failed.\n",
world_mpi_rank, fcn_name);
- } else if ( test_config.metadata_write_strategy !=
+ } else if ( test_config.metadata_write_strategy !=
metadata_write_strategy ) {
nerrors++;
if ( verbose ) {
- HDfprintf(stdout,
+ HDfprintf(stdout,
"%d:%s: unexpected metadata_write_strategy.\n",
world_mpi_rank, fcn_name);
}
@@ -4050,68 +3982,68 @@ setup_cache_for_test(hid_t * fid_ptr,
if ( success ) {
- if ( H5AC_set_write_done_callback(cache_ptr, do_sync) != SUCCEED ) {
+ if ( H5AC_set_write_done_callback(cache_ptr, do_sync) != SUCCEED ) {
nerrors++;
if ( verbose ) {
- HDfprintf(stdout,
- "%d:%s: H5C_set_write_done_callback failed.\n",
+ HDfprintf(stdout,
+ "%d:%s: H5C_set_write_done_callback failed.\n",
world_mpi_rank, fcn_name);
}
- }
+ }
}
#endif /* DO_SYNC_AFTER_WRITE */
if ( success ) {
- if ( H5AC_set_sync_point_done_callback(cache_ptr, verify_writes) !=
+ if ( H5AC_set_sync_point_done_callback(cache_ptr, verify_writes) !=
SUCCEED ) {
nerrors++;
if ( verbose ) {
- HDfprintf(stdout,
- "%d:%s: H5AC_set_sync_point_done_callback failed.\n",
+ HDfprintf(stdout,
+ "%d:%s: H5AC_set_sync_point_done_callback failed.\n",
world_mpi_rank, fcn_name);
}
- }
+ }
}
return(success);
} /* setup_cache_for_test() */
-
+
/*****************************************************************************
*
- * Function: verify_writes()
+ * Function: verify_writes()
*
- * Purpose: Verify that the indicated entries have been written exactly
- * once each, and that the indicated total number of writes
- * has been processed by the server process. Flag an error if
- * discrepency is noted. Finally reset the counters maintained
- * by the server process.
+ * Purpose: Verify that the indicated entries have been written exactly
+ * once each, and that the indicated total number of writes
+ * has been processed by the server process. Flag an error if
+ * discrepency is noted. Finally reset the counters maintained
+ * by the server process.
*
- * This function should only be called by the metadata cache
- * as the "sync point done" function, as it must do some
- * synchronization to avoid false positives.
+ * This function should only be called by the metadata cache
+ * as the "sync point done" function, as it must do some
+ * synchronization to avoid false positives.
*
- * Note that at present, this function does not allow for the
- * case in which one or more of the indicated entries should
- * have been written more than once since the last time the
- * server process's counters were reset. That is fine for now,
- * as with the current metadata write strategies, no entry
- * should be written more than once per sync point. If this
- * changes this limitation will have to be revisited.
+ * Note that at present, this function does not allow for the
+ * case in which one or more of the indicated entries should
+ * have been written more than once since the last time the
+ * server process's counters were reset. That is fine for now,
+ * as with the current metadata write strategies, no entry
+ * should be written more than once per sync point. If this
+ * changes this limitation will have to be revisited.
*
- * Return: void.
+ * Return: void.
*
- * Programmer: JRM -- 5/9/10
+ * Programmer: JRM -- 5/9/10
*
*****************************************************************************/
static void
verify_writes(int num_writes,
- haddr_t * written_entries_tbl)
+ haddr_t * written_entries_tbl)
{
const char * fcn_name = "verify_writes()";
const hbool_t report = FALSE;
@@ -4139,12 +4071,10 @@ verify_writes(int num_writes,
}
}
- if ( proceed ) {
-
+ if(proceed)
proceed = verify_total_writes(num_writes);
- }
- while ( ( proceed ) && ( i < num_writes ) )
+ while ( ( proceed ) && ( i < num_writes ) )
{
proceed = verify_entry_writes(written_entries_tbl[i], 1);
i++;
@@ -4188,7 +4118,7 @@ verify_writes(int num_writes,
}
/* final barrier to ensure that all processes think that the server
- * counters have been reset before we leave the sync point. This
+ * counters have been reset before we leave the sync point. This
* barrier is probaby not necessary at this point in time (5/9/10),
* but I can think of at least one likely change to the metadata write
* strategies that will require it -- hence its insertion now.
@@ -4213,24 +4143,23 @@ verify_writes(int num_writes,
/*****************************************************************************
*
- * Function: setup_rand()
+ * Function: setup_rand()
*
- * Purpose: Use gettimeofday() to obtain a seed for rand(), print the
- * seed to stdout, and then pass it to srand().
+ * Purpose: Use gettimeofday() to obtain a seed for rand(), print the
+ * seed to stdout, and then pass it to srand().
*
- * Increment nerrors if any errors are detected.
+ * Increment nerrors if any errors are detected.
*
- * Return: void.
+ * Return: void.
*
- * Programmer: JRM -- 1/12/06
+ * Programmer: JRM -- 1/12/06
*
* Modifications:
*
- * JRM -- 5/9/06
- * Modified function to facilitate setting predefined seeds.
+ * JRM -- 5/9/06
+ * Modified function to facilitate setting predefined seeds.
*
*****************************************************************************/
-
static void
setup_rand(void)
{
@@ -4244,13 +4173,13 @@ setup_rand(void)
if ( ( use_predefined_seeds ) &&
( world_mpi_size == num_predefined_seeds ) ) {
- HDassert( world_mpi_rank >= 0 );
- HDassert( world_mpi_rank < world_mpi_size );
+ HDassert( world_mpi_rank >= 0 );
+ HDassert( world_mpi_rank < world_mpi_size );
seed = predefined_seeds[world_mpi_rank];
- HDfprintf(stdout, "%d:%s: predefined_seed = %d.\n",
+ HDfprintf(stdout, "%d:%s: predefined_seed = %d.\n",
world_mpi_rank, fcn_name, seed);
- fflush(stdout);
+ fflush(stdout);
HDsrand(seed);
} else {
@@ -4259,7 +4188,7 @@ setup_rand(void)
nerrors++;
if ( verbose ) {
- HDfprintf(stdout, "%d:%s: gettimeofday() failed.\n",
+ HDfprintf(stdout, "%d:%s: gettimeofday() failed.\n",
world_mpi_rank, fcn_name);
}
} else {
@@ -4280,25 +4209,20 @@ setup_rand(void)
/*****************************************************************************
*
- * Function: take_down_cache()
- *
- * Purpose: Take down the parallel cache after a test.
+ * Function: take_down_cache()
*
- * To do this, we must close the file, and delete if if
- * possible.
+ * Purpose: Take down the parallel cache after a test.
*
- * Return: Success: TRUE
+ * To do this, we must close the file, and delete if if
+ * possible.
*
- * Failure: FALSE
+ * Return: Success: TRUE
*
- * Programmer: JRM -- 1/4/06
+ * Failure: FALSE
*
- * Modifications:
- *
- * None.
+ * Programmer: JRM -- 1/4/06
*
*****************************************************************************/
-
static hbool_t
take_down_cache(hid_t fid)
{
@@ -4325,7 +4249,7 @@ take_down_cache(hid_t fid)
}
} else {
- success = TRUE;
+ success = TRUE;
}
} else {
@@ -4336,19 +4260,19 @@ take_down_cache(hid_t fid)
} /* take_down_cache() */
-
+
/*****************************************************************************
* Function: verify_entry_reads
*
- * Purpose: Query the server to determine the number of times the
- * indicated entry has been read since the last time the
- * server counters were reset.
+ * Purpose: Query the server to determine the number of times the
+ * indicated entry has been read since the last time the
+ * server counters were reset.
*
- * Return TRUE if successful, and if the supplied expected
- * number of reads matches the number of reads reported by
- * the server process.
+ * Return TRUE if successful, and if the supplied expected
+ * number of reads matches the number of reads reported by
+ * the server process.
*
- * Return FALSE and flag an error otherwise.
+ * Return FALSE and flag an error otherwise.
*
* Return: TRUE if successful, FALSE otherwise.
*
@@ -4432,31 +4356,31 @@ verify_entry_reads(haddr_t addr,
nerrors++;
success = FALSE;
if ( verbose ) {
- HDfprintf(stdout,
+ HDfprintf(stdout,
"%d:%s: rep/exp entry 0x%llx reads mismatch (%ld/%ld).\n",
world_mpi_rank, fcn_name, (long long)addr,
reported_entry_reads, expected_entry_reads);
}
- }
+ }
}
return(success);
} /* verify_entry_reads() */
-
+
/*****************************************************************************
* Function: verify_entry_writes
*
- * Purpose: Query the server to determine the number of times the
- * indicated entry has been written since the last time the
- * server counters were reset.
+ * Purpose: Query the server to determine the number of times the
+ * indicated entry has been written since the last time the
+ * server counters were reset.
*
- * Return TRUE if successful, and if the supplied expected
- * number of reads matches the number of reads reported by
- * the server process.
+ * Return TRUE if successful, and if the supplied expected
+ * number of reads matches the number of reads reported by
+ * the server process.
*
- * Return FALSE and flag an error otherwise.
+ * Return FALSE and flag an error otherwise.
*
* Return: TRUE if successful, FALSE otherwise.
*
@@ -4540,36 +4464,36 @@ verify_entry_writes(haddr_t addr,
nerrors++;
success = FALSE;
if ( verbose ) {
- HDfprintf(stdout,
+ HDfprintf(stdout,
"%d:%s: rep/exp entry 0x%llx writes mismatch (%ld/%ld).\n",
world_mpi_rank, fcn_name, (long long)addr,
reported_entry_writes, expected_entry_writes);
}
- }
+ }
}
return(success);
} /* verify_entry_writes() */
-
+
/*****************************************************************************
*
- * Function: verify_total_reads()
+ * Function: verify_total_reads()
*
- * Purpose: Query the server to obtain the total reads since the last
- * server counter reset, and compare this value with the supplied
- * expected value.
+ * Purpose: Query the server to obtain the total reads since the last
+ * server counter reset, and compare this value with the supplied
+ * expected value.
*
- * If the values match, return TRUE.
+ * If the values match, return TRUE.
*
- * If the values don't match, flag an error and return FALSE.
+ * If the values don't match, flag an error and return FALSE.
*
- * Return: Success: TRUE
+ * Return: Success: TRUE
*
- * Failure: FALSE
+ * Failure: FALSE
*
- * Programmer: JRM -- 5/6/10
+ * Programmer: JRM -- 5/6/10
*
*****************************************************************************/
static hbool_t
@@ -4641,9 +4565,9 @@ verify_total_reads(int expected_total_reads)
nerrors++;
success = FALSE;
if ( verbose ) {
- HDfprintf(stdout,
+ HDfprintf(stdout,
"%d:%s: reported/expected total reads mismatch (%ld/%ld).\n",
- world_mpi_rank, fcn_name,
+ world_mpi_rank, fcn_name,
reported_total_reads, expected_total_reads);
}
@@ -4654,24 +4578,24 @@ verify_total_reads(int expected_total_reads)
} /* verify_total_reads() */
-
+
/*****************************************************************************
*
- * Function: verify_total_writes()
+ * Function: verify_total_writes()
*
- * Purpose: Query the server to obtain the total writes since the last
- * server counter reset, and compare this value with the supplied
- * expected value.
+ * Purpose: Query the server to obtain the total writes since the last
+ * server counter reset, and compare this value with the supplied
+ * expected value.
*
- * If the values match, return TRUE.
+ * If the values match, return TRUE.
*
- * If the values don't match, flag an error and return FALSE.
+ * If the values don't match, flag an error and return FALSE.
*
- * Return: Success: TRUE
+ * Return: Success: TRUE
*
- * Failure: FALSE
+ * Failure: FALSE
*
- * Programmer: JRM -- 5/6/10
+ * Programmer: JRM -- 5/6/10
*
*****************************************************************************/
static hbool_t
@@ -4743,9 +4667,9 @@ verify_total_writes(int expected_total_writes)
nerrors++;
success = FALSE;
if ( verbose ) {
- HDfprintf(stdout,
+ HDfprintf(stdout,
"%d:%s: reported/expected total writes mismatch (%ld/%ld).\n",
- world_mpi_rank, fcn_name,
+ world_mpi_rank, fcn_name,
reported_total_writes, expected_total_writes);
}
}
@@ -4770,8 +4694,8 @@ verify_total_writes(int expected_total_writes)
*
* Modifications:
*
- * 7/11/06
- * Updated for the new local_len field in datum.
+ * 7/11/06
+ * Updated for the new local_len field in datum.
*
*****************************************************************************/
@@ -4793,7 +4717,7 @@ unlock_entry(H5F_t * file_ptr,
entry_ptr = &(data[idx]);
- HDassert( entry_ptr->locked );
+ HDassert( entry_ptr->locked );
dirtied = ((flags & H5AC__DIRTIED_FLAG) == H5AC__DIRTIED_FLAG );
@@ -4809,7 +4733,7 @@ unlock_entry(H5F_t * file_ptr,
if ( ( result < 0 ) ||
( entry_ptr->header.type != &(types[0]) ) ||
( ( entry_ptr->len != entry_ptr->header.size ) &&
- ( entry_ptr->local_len != entry_ptr->header.size ) ) ||
+ ( entry_ptr->local_len != entry_ptr->header.size ) ) ||
( entry_ptr->base_addr != entry_ptr->header.addr ) ) {
nerrors++;
@@ -4821,7 +4745,7 @@ unlock_entry(H5F_t * file_ptr,
entry_ptr->locked = FALSE;
- }
+ }
HDassert( ((entry_ptr->header).type)->id == DATUM_ENTRY_TYPE );
@@ -4857,11 +4781,10 @@ unlock_entry(H5F_t * file_ptr,
*
* Modifications:
*
- * JRM -- 8/15/06
- * Added assertion that entry is pinned on entry.
+ * JRM -- 8/15/06
+ * Added assertion that entry is pinned on entry.
*
*****************************************************************************/
-
static void
unpin_entry(H5F_t * file_ptr,
int32_t idx,
@@ -4882,54 +4805,54 @@ unpin_entry(H5F_t * file_ptr,
entry_ptr = &(data[idx]);
- HDassert( (entry_ptr->header).is_pinned );
- HDassert ( ! ( entry_ptr->global_pinned && entry_ptr->local_pinned) );
- HDassert ( ( global && entry_ptr->global_pinned ) ||
- ( ! global && entry_ptr->local_pinned ) );
- HDassert ( ! ( dirty && ( ! global ) ) );
+ HDassert( (entry_ptr->header).is_pinned );
+ HDassert ( ! ( entry_ptr->global_pinned && entry_ptr->local_pinned) );
+ HDassert ( ( global && entry_ptr->global_pinned ) ||
+ ( ! global && entry_ptr->local_pinned ) );
+ HDassert ( ! ( dirty && ( ! global ) ) );
- if ( via_unprotect ) {
+ if ( via_unprotect ) {
- lock_entry(file_ptr, idx);
+ lock_entry(file_ptr, idx);
- if ( dirty ) {
+ if ( dirty ) {
- flags |= H5AC__DIRTIED_FLAG;
- }
+ flags |= H5AC__DIRTIED_FLAG;
+ }
- unlock_entry(file_ptr, idx, flags);
+ unlock_entry(file_ptr, idx, flags);
- } else {
+ } else {
- if ( dirty ) {
+ if ( dirty ) {
- mark_entry_dirty(idx);
+ mark_entry_dirty(idx);
- }
+ }
- result = H5AC_unpin_entry(entry_ptr);
+ result = H5AC_unpin_entry(entry_ptr);
- if ( result < 0 ) {
+ if ( result < 0 ) {
nerrors++;
if ( verbose ) {
HDfprintf(stdout, "%d:%s: error in H5AC_unpin_entry().\n",
- world_mpi_rank, fcn_name);
+ world_mpi_rank, fcn_name);
}
- }
- }
+ }
+ }
HDassert( ! ((entry_ptr->header).is_pinned) );
- if ( global ) {
+ if ( global ) {
- entry_ptr->global_pinned = FALSE;
+ entry_ptr->global_pinned = FALSE;
- } else {
+ } else {
- entry_ptr->local_pinned = FALSE;
+ entry_ptr->local_pinned = FALSE;
- }
+ }
}
return;
@@ -4941,18 +4864,18 @@ unpin_entry(H5F_t * file_ptr,
/****************************** test functions *******************************/
/*****************************************************************************/
-
+
/*****************************************************************************
*
- * Function: server_smoke_check()
+ * Function: server_smoke_check()
*
- * Purpose: Quick smoke check for the server process.
+ * Purpose: Quick smoke check for the server process.
*
- * Return: Success: TRUE
+ * Return: Success: TRUE
*
- * Failure: FALSE
+ * Failure: FALSE
*
- * Programmer: JRM -- 12/21/05
+ * Programmer: JRM -- 12/21/05
*
*****************************************************************************/
static hbool_t
@@ -4974,12 +4897,12 @@ server_smoke_check(void)
if ( world_mpi_rank == world_server_mpi_rank ) {
- if ( ! server_main() ) {
+ if ( ! server_main() ) {
/* some error occured in the server -- report failure */
nerrors++;
if ( verbose ) {
- HDfprintf(stdout, "%d:%s: server_main() failed.\n",
+ HDfprintf(stdout, "%d:%s: server_main() failed.\n",
world_mpi_rank, fcn_name);
}
}
@@ -5045,9 +4968,9 @@ server_smoke_check(void)
#endif /* DO_WRITE_REQ_ACK */
- do_sync();
+ do_sync();
- /* barrier to allow all writes to complete */
+ /* barrier to allow all writes to complete */
if ( MPI_SUCCESS != MPI_Barrier(file_mpi_comm) ) {
success = FALSE;
@@ -5062,12 +4985,12 @@ server_smoke_check(void)
if ( success ) {
success = verify_entry_writes(data[world_mpi_rank].base_addr, 1);
- }
+ }
if ( success ) {
success = verify_entry_reads(data[world_mpi_rank].base_addr, 0);
- }
+ }
if ( success ) {
@@ -5079,7 +5002,7 @@ server_smoke_check(void)
success = verify_total_reads(0);
}
- /* barrier to allow all writes to complete */
+ /* barrier to allow all writes to complete */
if ( MPI_SUCCESS != MPI_Barrier(file_mpi_comm) ) {
success = FALSE;
@@ -5151,7 +5074,7 @@ server_smoke_check(void)
}
}
- /* barrier to allow all writes to complete */
+ /* barrier to allow all writes to complete */
if ( MPI_SUCCESS != MPI_Barrier(file_mpi_comm) ) {
success = FALSE;
@@ -5166,12 +5089,12 @@ server_smoke_check(void)
if ( success ) {
success = verify_entry_writes(data[world_mpi_rank].base_addr, 1);
- }
+ }
if ( success ) {
success = verify_entry_reads(data[world_mpi_rank].base_addr, 1);
- }
+ }
if ( success ) {
@@ -5215,12 +5138,12 @@ server_smoke_check(void)
if ( success ) {
success = verify_entry_writes(data[world_mpi_rank].base_addr, 0);
- }
+ }
if ( success ) {
success = verify_entry_reads(data[world_mpi_rank].base_addr, 0);
- }
+ }
if ( success ) {
@@ -5273,9 +5196,9 @@ server_smoke_check(void)
if ( world_mpi_rank == 0 ) {
- if ( max_nerrors == 0 ) {
+ if ( max_nerrors == 0 ) {
- PASSED();
+ PASSED();
} else {
@@ -5290,18 +5213,18 @@ server_smoke_check(void)
} /* server_smoke_check() */
-
+
/*****************************************************************************
*
- * Function: smoke_check_1()
+ * Function: smoke_check_1()
*
- * Purpose: First smoke check for the parallel cache.
+ * Purpose: First smoke check for the parallel cache.
*
- * Return: Success: TRUE
+ * Return: Success: TRUE
*
- * Failure: FALSE
+ * Failure: FALSE
*
- * Programmer: JRM -- 1/4/06
+ * Programmer: JRM -- 1/4/06
*
*****************************************************************************/
static hbool_t
@@ -5318,23 +5241,23 @@ smoke_check_1(int metadata_write_strategy)
switch ( metadata_write_strategy ) {
- case H5AC_METADATA_WRITE_STRATEGY__PROCESS_0_ONLY:
+ case H5AC_METADATA_WRITE_STRATEGY__PROCESS_0_ONLY:
if ( world_mpi_rank == 0 ) {
- TESTING("smoke check #1 -- process 0 only md write strategy");
+ TESTING("smoke check #1 -- process 0 only md write strategy");
}
- break;
+ break;
- case H5AC_METADATA_WRITE_STRATEGY__DISTRIBUTED:
+ case H5AC_METADATA_WRITE_STRATEGY__DISTRIBUTED:
if ( world_mpi_rank == 0 ) {
- TESTING("smoke check #1 -- distributed md write strategy");
+ TESTING("smoke check #1 -- distributed md write strategy");
}
- break;
+ break;
default:
if ( world_mpi_rank == 0 ) {
- TESTING("smoke check #1 -- unknown md write strategy");
+ TESTING("smoke check #1 -- unknown md write strategy");
}
- break;
+ break;
}
nerrors = 0;
@@ -5343,12 +5266,12 @@ smoke_check_1(int metadata_write_strategy)
if ( world_mpi_rank == world_server_mpi_rank ) {
- if ( ! server_main() ) {
+ if ( ! server_main() ) {
/* some error occured in the server -- report failure */
nerrors++;
if ( verbose ) {
- HDfprintf(stdout, "%d:%s: server_main() failed.\n",
+ HDfprintf(stdout, "%d:%s: server_main() failed.\n",
world_mpi_rank, fcn_name);
}
}
@@ -5362,7 +5285,7 @@ smoke_check_1(int metadata_write_strategy)
fid = -1;
cache_ptr = NULL;
if ( verbose ) {
- HDfprintf(stdout, "%d:%s: setup_cache_for_test() failed.\n",
+ HDfprintf(stdout, "%d:%s: setup_cache_for_test() failed.\n",
world_mpi_rank, fcn_name);
}
}
@@ -5374,24 +5297,24 @@ smoke_check_1(int metadata_write_strategy)
for ( i = (virt_num_data_entries / 2) - 1; i >= 0; i-- )
{
- lock_entry(file_ptr, i);
- unlock_entry(file_ptr, i, H5AC__NO_FLAGS_SET);
+ lock_entry(file_ptr, i);
+ unlock_entry(file_ptr, i, H5AC__NO_FLAGS_SET);
}
/* Move the first half of the entries... */
for ( i = 0; i < (virt_num_data_entries / 2); i++ )
{
- lock_entry(file_ptr, i);
- unlock_entry(file_ptr, i, H5AC__NO_FLAGS_SET);
- move_entry(file_ptr, i, (i + (virt_num_data_entries / 2)));
+ lock_entry(file_ptr, i);
+ unlock_entry(file_ptr, i, H5AC__NO_FLAGS_SET);
+ move_entry(file_ptr, i, (i + (virt_num_data_entries / 2)));
}
/* ...and then move them back. */
for ( i = (virt_num_data_entries / 2) - 1; i >= 0; i-- )
{
- lock_entry(file_ptr, i);
- unlock_entry(file_ptr, i, H5AC__NO_FLAGS_SET);
- move_entry(file_ptr, i, (i + (virt_num_data_entries / 2)));
+ lock_entry(file_ptr, i);
+ unlock_entry(file_ptr, i, H5AC__NO_FLAGS_SET);
+ move_entry(file_ptr, i, (i + (virt_num_data_entries / 2)));
}
if ( fid >= 0 ) {
@@ -5400,7 +5323,7 @@ smoke_check_1(int metadata_write_strategy)
nerrors++;
if ( verbose ) {
- HDfprintf(stdout, "%d:%s: take_down_cache() failed.\n",
+ HDfprintf(stdout, "%d:%s: take_down_cache() failed.\n",
world_mpi_rank, fcn_name);
}
}
@@ -5446,9 +5369,9 @@ smoke_check_1(int metadata_write_strategy)
if ( world_mpi_rank == 0 ) {
- if ( max_nerrors == 0 ) {
+ if ( max_nerrors == 0 ) {
- PASSED();
+ PASSED();
} else {
@@ -5463,21 +5386,21 @@ smoke_check_1(int metadata_write_strategy)
} /* smoke_check_1() */
-
+
/*****************************************************************************
*
- * Function: smoke_check_2()
+ * Function: smoke_check_2()
*
- * Purpose: Second smoke check for the parallel cache.
+ * Purpose: Second smoke check for the parallel cache.
*
- * Introduce random reads, but keep all processes with roughly
- * the same work load.
+ * Introduce random reads, but keep all processes with roughly
+ * the same work load.
*
- * Return: Success: TRUE
+ * Return: Success: TRUE
*
- * Failure: FALSE
+ * Failure: FALSE
*
- * Programmer: JRM -- 1/12/06
+ * Programmer: JRM -- 1/12/06
*
*****************************************************************************/
static hbool_t
@@ -5494,23 +5417,23 @@ smoke_check_2(int metadata_write_strategy)
switch ( metadata_write_strategy ) {
- case H5AC_METADATA_WRITE_STRATEGY__PROCESS_0_ONLY:
+ case H5AC_METADATA_WRITE_STRATEGY__PROCESS_0_ONLY:
if ( world_mpi_rank == 0 ) {
- TESTING("smoke check #2 -- process 0 only md write strategy");
+ TESTING("smoke check #2 -- process 0 only md write strategy");
}
- break;
+ break;
- case H5AC_METADATA_WRITE_STRATEGY__DISTRIBUTED:
+ case H5AC_METADATA_WRITE_STRATEGY__DISTRIBUTED:
if ( world_mpi_rank == 0 ) {
- TESTING("smoke check #2 -- distributed md write strategy");
+ TESTING("smoke check #2 -- distributed md write strategy");
}
- break;
+ break;
default:
if ( world_mpi_rank == 0 ) {
- TESTING("smoke check #2 -- unknown md write strategy");
+ TESTING("smoke check #2 -- unknown md write strategy");
}
- break;
+ break;
}
nerrors = 0;
@@ -5519,12 +5442,12 @@ smoke_check_2(int metadata_write_strategy)
if ( world_mpi_rank == world_server_mpi_rank ) {
- if ( ! server_main() ) {
+ if ( ! server_main() ) {
/* some error occured in the server -- report failure */
nerrors++;
if ( verbose ) {
- HDfprintf(stdout, "%d:%s: server_main() failed.\n",
+ HDfprintf(stdout, "%d:%s: server_main() failed.\n",
world_mpi_rank, fcn_name);
}
}
@@ -5538,7 +5461,7 @@ smoke_check_2(int metadata_write_strategy)
fid = -1;
cache_ptr = NULL;
if ( verbose ) {
- HDfprintf(stdout, "%d:%s: setup_cache_for_test() failed.\n",
+ HDfprintf(stdout, "%d:%s: setup_cache_for_test() failed.\n",
world_mpi_rank, fcn_name);
}
}
@@ -5549,73 +5472,73 @@ smoke_check_2(int metadata_write_strategy)
if ( i > 100 ) {
- lock_and_unlock_random_entries(file_ptr, (i - 100), i, 0, 10);
+ lock_and_unlock_random_entries(file_ptr, (i - 100), i, 0, 10);
}
}
- for ( i = 0; i < (virt_num_data_entries / 2); i+=61 )
- {
- /* Make sure we don't step on any locally pinned entries */
- if ( data[i].local_pinned ) {
- unpin_entry(file_ptr, i, FALSE, FALSE, FALSE);
- }
+ for ( i = 0; i < (virt_num_data_entries / 2); i+=61 )
+ {
+ /* Make sure we don't step on any locally pinned entries */
+ if ( data[i].local_pinned ) {
+ unpin_entry(file_ptr, i, FALSE, FALSE, FALSE);
+ }
- pin_entry(file_ptr, i, TRUE, FALSE);
- }
+ pin_entry(file_ptr, i, TRUE, FALSE);
+ }
for ( i = (virt_num_data_entries / 2) - 1; i >= 0; i-=2 )
{
- lock_entry(file_ptr, i);
- unlock_entry(file_ptr, i, H5AC__NO_FLAGS_SET);
- lock_and_unlock_random_entries(file_ptr, 0,
- (virt_num_data_entries / 20),
- 0, 100);
- local_pin_and_unpin_random_entries(file_ptr, 0,
- (virt_num_data_entries / 4),
- 0, 3);
+ lock_entry(file_ptr, i);
+ unlock_entry(file_ptr, i, H5AC__NO_FLAGS_SET);
+ lock_and_unlock_random_entries(file_ptr, 0,
+ (virt_num_data_entries / 20),
+ 0, 100);
+ local_pin_and_unpin_random_entries(file_ptr, 0,
+ (virt_num_data_entries / 4),
+ 0, 3);
}
for ( i = 0; i < (virt_num_data_entries / 2); i+=2 )
{
- lock_entry(file_ptr, i);
- unlock_entry(file_ptr, i, H5AC__DIRTIED_FLAG);
- lock_and_unlock_random_entries(file_ptr, 0,
- (virt_num_data_entries / 10),
- 0, 100);
+ lock_entry(file_ptr, i);
+ unlock_entry(file_ptr, i, H5AC__DIRTIED_FLAG);
+ lock_and_unlock_random_entries(file_ptr, 0,
+ (virt_num_data_entries / 10),
+ 0, 100);
}
- /* we can't move pinned entries, so release any local pins now. */
- local_unpin_all_entries(file_ptr, FALSE);
+ /* we can't move pinned entries, so release any local pins now. */
+ local_unpin_all_entries(file_ptr, FALSE);
/* Move the first half of the entries... */
for ( i = 0; i < (virt_num_data_entries / 2); i++ )
{
- lock_entry(file_ptr, i);
- unlock_entry(file_ptr, i, H5AC__NO_FLAGS_SET);
- move_entry(file_ptr, i, (i + (virt_num_data_entries / 2)));
- lock_and_unlock_random_entries(file_ptr, 0,
- ((virt_num_data_entries / 50) - 1),
+ lock_entry(file_ptr, i);
+ unlock_entry(file_ptr, i, H5AC__NO_FLAGS_SET);
+ move_entry(file_ptr, i, (i + (virt_num_data_entries / 2)));
+ lock_and_unlock_random_entries(file_ptr, 0,
+ ((virt_num_data_entries / 50) - 1),
0, 100);
}
/* ...and then move them back. */
for ( i = (virt_num_data_entries / 2) - 1; i >= 0; i-- )
{
- lock_entry(file_ptr, i);
- unlock_entry(file_ptr, i, H5AC__DIRTIED_FLAG);
- move_entry(file_ptr, i, (i + (virt_num_data_entries / 2)));
- lock_and_unlock_random_entries(file_ptr, 0,
- (virt_num_data_entries / 100),
- 0, 100);
+ lock_entry(file_ptr, i);
+ unlock_entry(file_ptr, i, H5AC__DIRTIED_FLAG);
+ move_entry(file_ptr, i, (i + (virt_num_data_entries / 2)));
+ lock_and_unlock_random_entries(file_ptr, 0,
+ (virt_num_data_entries / 100),
+ 0, 100);
}
- for ( i = 0; i < (virt_num_data_entries / 2); i+=61 )
- {
- hbool_t via_unprotect = ( (((unsigned)i) & 0x01) == 0 );
- hbool_t dirty = ( (((unsigned)i) & 0x02) == 0 );
+ for ( i = 0; i < (virt_num_data_entries / 2); i+=61 )
+ {
+ hbool_t via_unprotect = ( (((unsigned)i) & 0x01) == 0 );
+ hbool_t dirty = ( (((unsigned)i) & 0x02) == 0 );
- unpin_entry(file_ptr, i, TRUE, dirty, via_unprotect);
- }
+ unpin_entry(file_ptr, i, TRUE, dirty, via_unprotect);
+ }
if ( fid >= 0 ) {
@@ -5623,7 +5546,7 @@ smoke_check_2(int metadata_write_strategy)
nerrors++;
if ( verbose ) {
- HDfprintf(stdout, "%d:%s: take_down_cache() failed.\n",
+ HDfprintf(stdout, "%d:%s: take_down_cache() failed.\n",
world_mpi_rank, fcn_name);
}
}
@@ -5669,9 +5592,9 @@ smoke_check_2(int metadata_write_strategy)
if ( world_mpi_rank == 0 ) {
- if ( max_nerrors == 0 ) {
+ if ( max_nerrors == 0 ) {
- PASSED();
+ PASSED();
} else {
@@ -5686,24 +5609,24 @@ smoke_check_2(int metadata_write_strategy)
} /* smoke_check_2() */
-
+
/*****************************************************************************
*
- * Function: smoke_check_3()
+ * Function: smoke_check_3()
*
- * Purpose: Third smoke check for the parallel cache.
+ * Purpose: Third smoke check for the parallel cache.
*
- * Use random reads to vary the loads on the diffferent
- * processors. Also force different cache size adjustments.
+ * Use random reads to vary the loads on the diffferent
+ * processors. Also force different cache size adjustments.
*
- * In this test, load process 0 heavily, and the other
- * processes lightly.
+ * In this test, load process 0 heavily, and the other
+ * processes lightly.
*
- * Return: Success: TRUE
+ * Return: Success: TRUE
*
- * Failure: FALSE
+ * Failure: FALSE
*
- * Programmer: JRM -- 1/13/06
+ * Programmer: JRM -- 1/13/06
*
*****************************************************************************/
static hbool_t
@@ -5726,23 +5649,23 @@ smoke_check_3(int metadata_write_strategy)
switch ( metadata_write_strategy ) {
- case H5AC_METADATA_WRITE_STRATEGY__PROCESS_0_ONLY:
+ case H5AC_METADATA_WRITE_STRATEGY__PROCESS_0_ONLY:
if ( world_mpi_rank == 0 ) {
- TESTING("smoke check #3 -- process 0 only md write strategy");
+ TESTING("smoke check #3 -- process 0 only md write strategy");
}
- break;
+ break;
- case H5AC_METADATA_WRITE_STRATEGY__DISTRIBUTED:
+ case H5AC_METADATA_WRITE_STRATEGY__DISTRIBUTED:
if ( world_mpi_rank == 0 ) {
- TESTING("smoke check #3 -- distributed md write strategy");
+ TESTING("smoke check #3 -- distributed md write strategy");
}
- break;
+ break;
default:
if ( world_mpi_rank == 0 ) {
- TESTING("smoke check #3 -- unknown md write strategy");
+ TESTING("smoke check #3 -- unknown md write strategy");
}
- break;
+ break;
}
/* 0 */
@@ -5757,12 +5680,12 @@ smoke_check_3(int metadata_write_strategy)
/* 1 */
if ( verbose ) {HDfprintf(stderr, "%d: cp = %d\n", world_mpi_rank, cp++);}
- if ( ! server_main() ) {
+ if ( ! server_main() ) {
/* some error occured in the server -- report failure */
nerrors++;
if ( verbose ) {
- HDfprintf(stdout, "%d:%s: server_main() failed.\n",
+ HDfprintf(stdout, "%d:%s: server_main() failed.\n",
world_mpi_rank, fcn_name);
}
}
@@ -5782,7 +5705,7 @@ smoke_check_3(int metadata_write_strategy)
fid = -1;
cache_ptr = NULL;
if ( verbose ) {
- HDfprintf(stdout, "%d:%s: setup_cache_for_test() failed.\n",
+ HDfprintf(stdout, "%d:%s: setup_cache_for_test() failed.\n",
world_mpi_rank, fcn_name);
}
}
@@ -5799,7 +5722,7 @@ smoke_check_3(int metadata_write_strategy)
if ( i > 100 ) {
- lock_and_unlock_random_entries(file_ptr, (i - 100), i,
+ lock_and_unlock_random_entries(file_ptr, (i - 100), i,
min_count, max_count);
}
}
@@ -5812,51 +5735,51 @@ smoke_check_3(int metadata_write_strategy)
max_count = min_count + 50;
for ( i = (virt_num_data_entries / 4);
- i < (virt_num_data_entries / 2);
- i++ )
+ i < (virt_num_data_entries / 2);
+ i++ )
{
insert_entry(cache_ptr, file_ptr, i, H5AC__NO_FLAGS_SET);
- if ( i % 59 == 0 ) {
+ if ( i % 59 == 0 ) {
- hbool_t dirty = ( (i % 2) == 0);
+ hbool_t dirty = ( (i % 2) == 0);
- if ( data[i].local_pinned ) {
- unpin_entry(file_ptr, i, FALSE, FALSE, FALSE);
- }
+ if ( data[i].local_pinned ) {
+ unpin_entry(file_ptr, i, FALSE, FALSE, FALSE);
+ }
- pin_entry(file_ptr, i, TRUE, dirty);
+ pin_entry(file_ptr, i, TRUE, dirty);
- HDassert( !dirty || data[i].header.is_dirty );
- HDassert( data[i].header.is_pinned );
- HDassert( data[i].global_pinned );
- HDassert( ! data[i].local_pinned );
- }
+ HDassert( !dirty || data[i].header.is_dirty );
+ HDassert( data[i].header.is_pinned );
+ HDassert( data[i].global_pinned );
+ HDassert( ! data[i].local_pinned );
+ }
if ( i > 100 ) {
- lock_and_unlock_random_entries(file_ptr, (i - 100), i,
+ lock_and_unlock_random_entries(file_ptr, (i - 100), i,
min_count, max_count);
}
- local_pin_and_unpin_random_entries(file_ptr, 0,
+ local_pin_and_unpin_random_entries(file_ptr, 0,
virt_num_data_entries / 4,
- 0, (file_mpi_rank + 2));
+ 0, (file_mpi_rank + 2));
- }
+ }
/* 4 */
if ( verbose ) {HDfprintf(stderr, "%d: cp = %d\n", world_mpi_rank, cp++);}
- /* flush the file to be sure that we have no problems flushing
- * pinned entries
- */
+ /* flush the file to be sure that we have no problems flushing
+ * pinned entries
+ */
if ( H5Fflush(fid, H5F_SCOPE_GLOBAL) < 0 ) {
nerrors++;
if ( verbose ) {
- HDfprintf(stdout, "%d:%s: H5Fflush() failed.\n",
+ HDfprintf(stdout, "%d:%s: H5Fflush() failed.\n",
world_mpi_rank, fcn_name);
}
}
@@ -5875,27 +5798,27 @@ smoke_check_3(int metadata_write_strategy)
for ( i = (virt_num_data_entries / 2) - 1; i >= 0; i-- )
{
- if ( ( i >= (virt_num_data_entries / 4) ) && ( i % 59 == 0 ) ) {
+ if ( ( i >= (virt_num_data_entries / 4) ) && ( i % 59 == 0 ) ) {
hbool_t via_unprotect = ( (((unsigned)i) & 0x02) == 0 );
- hbool_t dirty = ( (((unsigned)i) & 0x04) == 0 );
-
- HDassert( data[i].global_pinned );
- HDassert( ! data[i].local_pinned );
-
- unpin_entry(file_ptr, i, TRUE, dirty,
- via_unprotect);
- }
- if ( i % 2 == 0 ) {
-
- lock_entry(file_ptr, i);
- unlock_entry(file_ptr, i, H5AC__NO_FLAGS_SET);
- local_pin_and_unpin_random_entries(file_ptr, 0,
- virt_num_data_entries / 2,
- 0, 2);
- lock_and_unlock_random_entries(file_ptr,
+ hbool_t dirty = ( (((unsigned)i) & 0x04) == 0 );
+
+ HDassert( data[i].global_pinned );
+ HDassert( ! data[i].local_pinned );
+
+ unpin_entry(file_ptr, i, TRUE, dirty,
+ via_unprotect);
+ }
+ if ( i % 2 == 0 ) {
+
+ lock_entry(file_ptr, i);
+ unlock_entry(file_ptr, i, H5AC__NO_FLAGS_SET);
+ local_pin_and_unpin_random_entries(file_ptr, 0,
+ virt_num_data_entries / 2,
+ 0, 2);
+ lock_and_unlock_random_entries(file_ptr,
min_idx, max_idx, 0, 100);
- }
+ }
}
/* 6 */
@@ -5911,9 +5834,9 @@ smoke_check_3(int metadata_write_strategy)
for ( i = 0; i < (virt_num_data_entries / 2); i+=2 )
{
- lock_entry(file_ptr, i);
- unlock_entry(file_ptr, i, H5AC__DIRTIED_FLAG);
- lock_and_unlock_random_entries(file_ptr,
+ lock_entry(file_ptr, i);
+ unlock_entry(file_ptr, i, H5AC__DIRTIED_FLAG);
+ lock_and_unlock_random_entries(file_ptr,
min_idx, max_idx, 0, 100);
}
@@ -5929,11 +5852,11 @@ smoke_check_3(int metadata_write_strategy)
/* move the first half of the entries... */
for ( i = 0; i < (virt_num_data_entries / 2); i++ )
{
- lock_entry(file_ptr, i);
- unlock_entry(file_ptr, i, H5AC__NO_FLAGS_SET);
- move_entry(file_ptr, i, (i + (virt_num_data_entries / 2)));
- lock_and_unlock_random_entries(file_ptr, 0,
- (virt_num_data_entries / 20),
+ lock_entry(file_ptr, i);
+ unlock_entry(file_ptr, i, H5AC__NO_FLAGS_SET);
+ move_entry(file_ptr, i, (i + (virt_num_data_entries / 2)));
+ lock_and_unlock_random_entries(file_ptr, 0,
+ (virt_num_data_entries / 20),
min_count, max_count);
}
@@ -5943,11 +5866,11 @@ smoke_check_3(int metadata_write_strategy)
/* ...and then move them back. */
for ( i = (virt_num_data_entries / 2) - 1; i >= 0; i-- )
{
- lock_entry(file_ptr, i);
- unlock_entry(file_ptr, i, H5AC__DIRTIED_FLAG);
- move_entry(file_ptr, i, (i + (virt_num_data_entries / 2)));
- lock_and_unlock_random_entries(file_ptr, 0,
- (virt_num_data_entries / 40),
+ lock_entry(file_ptr, i);
+ unlock_entry(file_ptr, i, H5AC__DIRTIED_FLAG);
+ move_entry(file_ptr, i, (i + (virt_num_data_entries / 2)));
+ lock_and_unlock_random_entries(file_ptr, 0,
+ (virt_num_data_entries / 40),
min_count, max_count);
}
@@ -5962,16 +5885,16 @@ smoke_check_3(int metadata_write_strategy)
for ( i = 0; i < (virt_num_data_entries / 2); i+=2 )
{
- local_pin_and_unpin_random_entries(file_ptr, 0,
- (virt_num_data_entries / 2),
- 0, 5);
+ local_pin_and_unpin_random_entries(file_ptr, 0,
+ (virt_num_data_entries / 2),
+ 0, 5);
- lock_entry(file_ptr, i);
- unlock_entry(file_ptr, i, H5AC__DIRTIED_FLAG);
+ lock_entry(file_ptr, i);
+ unlock_entry(file_ptr, i, H5AC__DIRTIED_FLAG);
if ( i > 100 ) {
- lock_and_unlock_random_entries(file_ptr, (i - 100), i,
+ lock_and_unlock_random_entries(file_ptr, (i - 100), i,
min_count, max_count);
}
}
@@ -5988,7 +5911,7 @@ smoke_check_3(int metadata_write_strategy)
nerrors++;
if ( verbose ) {
- HDfprintf(stdout, "%d:%s: take_down_cache() failed.\n",
+ HDfprintf(stdout, "%d:%s: take_down_cache() failed.\n",
world_mpi_rank, fcn_name);
}
}
@@ -6041,9 +5964,9 @@ smoke_check_3(int metadata_write_strategy)
if ( world_mpi_rank == 0 ) {
- if ( max_nerrors == 0 ) {
+ if ( max_nerrors == 0 ) {
- PASSED();
+ PASSED();
} else {
@@ -6058,24 +5981,24 @@ smoke_check_3(int metadata_write_strategy)
} /* smoke_check_3() */
-
+
/*****************************************************************************
*
- * Function: smoke_check_4()
+ * Function: smoke_check_4()
*
- * Purpose: Fourth smoke check for the parallel cache.
+ * Purpose: Fourth smoke check for the parallel cache.
*
- * Use random reads to vary the loads on the diffferent
- * processors. Also force different cache size adjustments.
+ * Use random reads to vary the loads on the diffferent
+ * processors. Also force different cache size adjustments.
*
- * In this test, load process 0 lightly, and the other
- * processes heavily.
+ * In this test, load process 0 lightly, and the other
+ * processes heavily.
*
- * Return: Success: TRUE
+ * Return: Success: TRUE
*
- * Failure: FALSE
+ * Failure: FALSE
*
- * Programmer: JRM -- 1/13/06
+ * Programmer: JRM -- 1/13/06
*
*****************************************************************************/
static hbool_t
@@ -6096,23 +6019,23 @@ smoke_check_4(int metadata_write_strategy)
switch ( metadata_write_strategy ) {
- case H5AC_METADATA_WRITE_STRATEGY__PROCESS_0_ONLY:
+ case H5AC_METADATA_WRITE_STRATEGY__PROCESS_0_ONLY:
if ( world_mpi_rank == 0 ) {
- TESTING("smoke check #4 -- process 0 only md write strategy");
+ TESTING("smoke check #4 -- process 0 only md write strategy");
}
- break;
+ break;
- case H5AC_METADATA_WRITE_STRATEGY__DISTRIBUTED:
+ case H5AC_METADATA_WRITE_STRATEGY__DISTRIBUTED:
if ( world_mpi_rank == 0 ) {
- TESTING("smoke check #4 -- distributed md write strategy");
+ TESTING("smoke check #4 -- distributed md write strategy");
}
- break;
+ break;
default:
if ( world_mpi_rank == 0 ) {
- TESTING("smoke check #4 -- unknown md write strategy");
+ TESTING("smoke check #4 -- unknown md write strategy");
}
- break;
+ break;
}
nerrors = 0;
@@ -6121,12 +6044,12 @@ smoke_check_4(int metadata_write_strategy)
if ( world_mpi_rank == world_server_mpi_rank ) {
- if ( ! server_main() ) {
+ if ( ! server_main() ) {
/* some error occured in the server -- report failure */
nerrors++;
if ( verbose ) {
- HDfprintf(stdout, "%d:%s: server_main() failed.\n",
+ HDfprintf(stdout, "%d:%s: server_main() failed.\n",
world_mpi_rank, fcn_name);
}
}
@@ -6140,7 +6063,7 @@ smoke_check_4(int metadata_write_strategy)
fid = -1;
cache_ptr = NULL;
if ( verbose ) {
- HDfprintf(stdout, "%d:%s: setup_cache_for_test() failed.\n",
+ HDfprintf(stdout, "%d:%s: setup_cache_for_test() failed.\n",
world_mpi_rank, fcn_name);
}
}
@@ -6155,7 +6078,7 @@ smoke_check_4(int metadata_write_strategy)
if ( i > 100 ) {
- lock_and_unlock_random_entries(file_ptr, (i - 100), i,
+ lock_and_unlock_random_entries(file_ptr, (i - 100), i,
min_count, max_count);
}
}
@@ -6164,23 +6087,23 @@ smoke_check_4(int metadata_write_strategy)
max_count = min_count + 100;
for ( i = (virt_num_data_entries / 4);
- i < (virt_num_data_entries / 2);
- i++ )
+ i < (virt_num_data_entries / 2);
+ i++ )
{
- if ( i % 2 == 0 ) {
+ if ( i % 2 == 0 ) {
insert_entry(cache_ptr, file_ptr, i, H5AC__NO_FLAGS_SET);
- } else {
+ } else {
- /* Insert some entries pinned, and then unpin them
- * immediately. We have tested pinned entries elsewhere,
- * so it should be sufficient to verify that the
- * entries are in fact pinned (which unpin_entry() should do).
- */
+ /* Insert some entries pinned, and then unpin them
+ * immediately. We have tested pinned entries elsewhere,
+ * so it should be sufficient to verify that the
+ * entries are in fact pinned (which unpin_entry() should do).
+ */
insert_entry(cache_ptr, file_ptr, i, H5C__PIN_ENTRY_FLAG);
unpin_entry(file_ptr, i, TRUE, FALSE, FALSE);
- }
+ }
if ( i % 59 == 0 ) {
@@ -6200,19 +6123,19 @@ smoke_check_4(int metadata_write_strategy)
if ( i > 100 ) {
- lock_and_unlock_random_entries(file_ptr, (i - 100), i,
+ lock_and_unlock_random_entries(file_ptr, (i - 100), i,
min_count, max_count);
}
local_pin_and_unpin_random_entries(file_ptr, 0,
- (virt_num_data_entries / 4),
+ (virt_num_data_entries / 4),
0, (file_mpi_rank + 2));
}
/* flush the file to be sure that we have no problems flushing
- * pinned entries
- */
+ * pinned entries
+ */
if ( H5Fflush(fid, H5F_SCOPE_GLOBAL) < 0 ) {
nerrors++;
if ( verbose ) {
@@ -6239,13 +6162,13 @@ smoke_check_4(int metadata_write_strategy)
unpin_entry(file_ptr, i, TRUE, dirty, via_unprotect);
}
- if ( i % 2 == 0 ) {
+ if ( i % 2 == 0 ) {
- lock_entry(file_ptr, i);
- unlock_entry(file_ptr, i, H5AC__NO_FLAGS_SET);
- lock_and_unlock_random_entries(file_ptr,
+ lock_entry(file_ptr, i);
+ unlock_entry(file_ptr, i, H5AC__NO_FLAGS_SET);
+ lock_and_unlock_random_entries(file_ptr,
min_idx, max_idx, 0, 100);
- }
+ }
}
min_idx = 0;
@@ -6254,14 +6177,14 @@ smoke_check_4(int metadata_write_strategy)
for ( i = 0; i < (virt_num_data_entries / 2); i+=2 )
{
- lock_entry(file_ptr, i);
- unlock_entry(file_ptr, i, H5AC__DIRTIED_FLAG);
- lock_and_unlock_random_entries(file_ptr,
+ lock_entry(file_ptr, i);
+ unlock_entry(file_ptr, i, H5AC__DIRTIED_FLAG);
+ lock_and_unlock_random_entries(file_ptr,
min_idx, max_idx, 0, 100);
}
- /* we can't move pinned entries, so release any local pins now. */
- local_unpin_all_entries(file_ptr, FALSE);
+ /* we can't move pinned entries, so release any local pins now. */
+ local_unpin_all_entries(file_ptr, FALSE);
min_count = 10 * (file_mpi_rank % 4);
max_count = min_count + 100;
@@ -6269,22 +6192,22 @@ smoke_check_4(int metadata_write_strategy)
/* move the first half of the entries... */
for ( i = 0; i < (virt_num_data_entries / 2); i++ )
{
- lock_entry(file_ptr, i);
- unlock_entry(file_ptr, i, H5AC__NO_FLAGS_SET);
- move_entry(file_ptr, i, (i + (virt_num_data_entries / 2)));
- lock_and_unlock_random_entries(file_ptr, 0,
- (virt_num_data_entries / 20),
+ lock_entry(file_ptr, i);
+ unlock_entry(file_ptr, i, H5AC__NO_FLAGS_SET);
+ move_entry(file_ptr, i, (i + (virt_num_data_entries / 2)));
+ lock_and_unlock_random_entries(file_ptr, 0,
+ (virt_num_data_entries / 20),
min_count, max_count);
}
/* ...and then move them back. */
for ( i = (virt_num_data_entries / 2) - 1; i >= 0; i-- )
{
- lock_entry(file_ptr, i);
- unlock_entry(file_ptr, i, H5AC__DIRTIED_FLAG);
- move_entry(file_ptr, i, (i + (virt_num_data_entries / 2)));
- lock_and_unlock_random_entries(file_ptr, 0,
- (virt_num_data_entries / 40),
+ lock_entry(file_ptr, i);
+ unlock_entry(file_ptr, i, H5AC__DIRTIED_FLAG);
+ move_entry(file_ptr, i, (i + (virt_num_data_entries / 2)));
+ lock_and_unlock_random_entries(file_ptr, 0,
+ (virt_num_data_entries / 40),
min_count, max_count);
}
@@ -6296,12 +6219,12 @@ smoke_check_4(int metadata_write_strategy)
for ( i = 0; i < (virt_num_data_entries / 2); i+=2 )
{
- lock_entry(file_ptr, i);
- unlock_entry(file_ptr, i, H5AC__DIRTIED_FLAG);
+ lock_entry(file_ptr, i);
+ unlock_entry(file_ptr, i, H5AC__DIRTIED_FLAG);
if ( i > 100 ) {
- lock_and_unlock_random_entries(file_ptr, (i - 100), i,
+ lock_and_unlock_random_entries(file_ptr, (i - 100), i,
min_count, max_count);
}
}
@@ -6312,7 +6235,7 @@ smoke_check_4(int metadata_write_strategy)
nerrors++;
if ( verbose ) {
- HDfprintf(stdout, "%d:%s: take_down_cache() failed.\n",
+ HDfprintf(stdout, "%d:%s: take_down_cache() failed.\n",
world_mpi_rank, fcn_name);
}
}
@@ -6359,9 +6282,9 @@ smoke_check_4(int metadata_write_strategy)
if ( world_mpi_rank == 0 ) {
- if ( max_nerrors == 0 ) {
+ if ( max_nerrors == 0 ) {
- PASSED();
+ PASSED();
} else {
@@ -6376,19 +6299,19 @@ smoke_check_4(int metadata_write_strategy)
} /* smoke_check_4() */
-
+
/*****************************************************************************
*
- * Function: smoke_check_5()
+ * Function: smoke_check_5()
*
- * Purpose: Similar to smoke check 1, but modified to verify that
- * H5AC_mark_entry_dirty() works in the parallel case.
+ * Purpose: Similar to smoke check 1, but modified to verify that
+ * H5AC_mark_entry_dirty() works in the parallel case.
*
- * Return: Success: TRUE
+ * Return: Success: TRUE
*
- * Failure: FALSE
+ * Failure: FALSE
*
- * Programmer: JRM -- 5/18/06
+ * Programmer: JRM -- 5/18/06
*
*****************************************************************************/
static hbool_t
@@ -6407,23 +6330,23 @@ smoke_check_5(int metadata_write_strategy)
switch ( metadata_write_strategy ) {
- case H5AC_METADATA_WRITE_STRATEGY__PROCESS_0_ONLY:
+ case H5AC_METADATA_WRITE_STRATEGY__PROCESS_0_ONLY:
if ( world_mpi_rank == 0 ) {
- TESTING("smoke check #5 -- process 0 only md write strategy");
+ TESTING("smoke check #5 -- process 0 only md write strategy");
}
- break;
+ break;
- case H5AC_METADATA_WRITE_STRATEGY__DISTRIBUTED:
+ case H5AC_METADATA_WRITE_STRATEGY__DISTRIBUTED:
if ( world_mpi_rank == 0 ) {
- TESTING("smoke check #5 -- distributed md write strategy");
+ TESTING("smoke check #5 -- distributed md write strategy");
}
- break;
+ break;
default:
if ( world_mpi_rank == 0 ) {
- TESTING("smoke check #5 -- unknown md write strategy");
+ TESTING("smoke check #5 -- unknown md write strategy");
}
- break;
+ break;
}
@@ -6438,22 +6361,22 @@ smoke_check_5(int metadata_write_strategy)
/* 1 */
if ( verbose ) {
- HDfprintf(stderr, "%d: cp = %d\n", world_mpi_rank, cp++);
+ HDfprintf(stderr, "%d: cp = %d\n", world_mpi_rank, cp++);
}
- if ( ! server_main() ) {
+ if ( ! server_main() ) {
/* some error occured in the server -- report failure */
nerrors++;
if ( verbose ) {
- HDfprintf(stdout, "%d:%s: server_main() failed.\n",
+ HDfprintf(stdout, "%d:%s: server_main() failed.\n",
world_mpi_rank, fcn_name);
}
}
/* 2 */
if ( verbose ) {
- HDfprintf(stderr, "%d: cp = %d\n", world_mpi_rank, cp++);
+ HDfprintf(stderr, "%d: cp = %d\n", world_mpi_rank, cp++);
}
}
else /* run the clients */
@@ -6461,7 +6384,7 @@ smoke_check_5(int metadata_write_strategy)
/* 1 */
if ( verbose ) {
- HDfprintf(stderr, "%d: cp = %d\n", world_mpi_rank, cp++);
+ HDfprintf(stderr, "%d: cp = %d\n", world_mpi_rank, cp++);
}
if ( ! setup_cache_for_test(&fid, &file_ptr, &cache_ptr,
@@ -6471,14 +6394,14 @@ smoke_check_5(int metadata_write_strategy)
fid = -1;
cache_ptr = NULL;
if ( verbose ) {
- HDfprintf(stdout, "%d:%s: setup_cache_for_test() failed.\n",
+ HDfprintf(stdout, "%d:%s: setup_cache_for_test() failed.\n",
world_mpi_rank, fcn_name);
}
}
/* 2 */
if ( verbose ) {
- HDfprintf(stderr, "%d: cp = %d\n", world_mpi_rank, cp++);
+ HDfprintf(stderr, "%d: cp = %d\n", world_mpi_rank, cp++);
}
for ( i = 0; i < (virt_num_data_entries / 2); i++ )
@@ -6488,78 +6411,78 @@ smoke_check_5(int metadata_write_strategy)
/* 3 */
if ( verbose ) {
- HDfprintf(stderr, "%d: cp = %d\n", world_mpi_rank, cp++);
+ HDfprintf(stderr, "%d: cp = %d\n", world_mpi_rank, cp++);
}
- /* flush the file so we can lock known clean entries. */
+ /* flush the file so we can lock known clean entries. */
if ( H5Fflush(fid, H5F_SCOPE_GLOBAL) < 0 ) {
nerrors++;
if ( verbose ) {
- HDfprintf(stdout, "%d:%s: H5Fflush() failed.\n",
+ HDfprintf(stdout, "%d:%s: H5Fflush() failed.\n",
world_mpi_rank, fcn_name);
}
}
/* 4 */
if ( verbose ) {
- HDfprintf(stderr, "%d: cp = %d\n", world_mpi_rank, cp++);
+ HDfprintf(stderr, "%d: cp = %d\n", world_mpi_rank, cp++);
}
for ( i = 0; i < (virt_num_data_entries / 4); i++ )
{
- lock_entry(file_ptr, i);
+ lock_entry(file_ptr, i);
- if ( i % 2 == 0 )
- {
- mark_entry_dirty(i);
- }
+ if ( i % 2 == 0 )
+ {
+ mark_entry_dirty(i);
+ }
- unlock_entry(file_ptr, i, H5AC__NO_FLAGS_SET);
+ unlock_entry(file_ptr, i, H5AC__NO_FLAGS_SET);
- if ( i % 2 == 1 )
- {
- if ( i % 4 == 1 ) {
+ if ( i % 2 == 1 )
+ {
+ if ( i % 4 == 1 ) {
- lock_entry(file_ptr, i);
- unlock_entry(file_ptr, i, H5AC__DIRTIED_FLAG);
- }
+ lock_entry(file_ptr, i);
+ unlock_entry(file_ptr, i, H5AC__DIRTIED_FLAG);
+ }
- expunge_entry(file_ptr, i);
- }
+ expunge_entry(file_ptr, i);
+ }
}
/* 5 */
if ( verbose ) {
- HDfprintf(stderr, "%d: cp = %d\n", world_mpi_rank, cp++);
+ HDfprintf(stderr, "%d: cp = %d\n", world_mpi_rank, cp++);
}
for ( i = (virt_num_data_entries / 2) - 1;
i >= (virt_num_data_entries / 4);
- i-- )
+ i-- )
{
- pin_entry(file_ptr, i, TRUE, FALSE);
+ pin_entry(file_ptr, i, TRUE, FALSE);
- if ( i % 2 == 0 )
- {
- if ( i % 8 <= 4 ) {
+ if ( i % 2 == 0 )
+ {
+ if ( i % 8 <= 4 ) {
- resize_entry(i, data[i].len / 2);
- }
+ resize_entry(i, data[i].len / 2);
+ }
mark_entry_dirty(i);
- if ( i % 8 <= 4 ) {
+ if ( i % 8 <= 4 ) {
- resize_entry(i, data[i].len);
- }
- }
+ resize_entry(i, data[i].len);
+ }
+ }
- unpin_entry(file_ptr, i, TRUE, FALSE, FALSE);
+ unpin_entry(file_ptr, i, TRUE, FALSE, FALSE);
}
/* 6 */
if ( verbose ) {
- HDfprintf(stderr, "%d: cp = %d\n", world_mpi_rank, cp++);
+ HDfprintf(stderr, "%d: cp = %d\n", world_mpi_rank, cp++);
}
if ( fid >= 0 ) {
@@ -6568,7 +6491,7 @@ smoke_check_5(int metadata_write_strategy)
nerrors++;
if ( verbose ) {
- HDfprintf(stdout, "%d:%s: take_down_cache() failed.\n",
+ HDfprintf(stdout, "%d:%s: take_down_cache() failed.\n",
world_mpi_rank, fcn_name);
}
}
@@ -6576,7 +6499,7 @@ smoke_check_5(int metadata_write_strategy)
/* 7 */
if ( verbose ) {
- HDfprintf(stderr, "%d: cp = %d\n", world_mpi_rank, cp++);
+ HDfprintf(stderr, "%d: cp = %d\n", world_mpi_rank, cp++);
}
/* verify that all instance of datum are back where the started
@@ -6591,7 +6514,7 @@ smoke_check_5(int metadata_write_strategy)
/* 8 */
if ( verbose ) {
- HDfprintf(stderr, "%d: cp = %d\n", world_mpi_rank, cp++);
+ HDfprintf(stderr, "%d: cp = %d\n", world_mpi_rank, cp++);
}
/* compose the done message */
@@ -6621,7 +6544,7 @@ smoke_check_5(int metadata_write_strategy)
/* 9 */
if ( verbose ) {
- HDfprintf(stderr, "%d: cp = %d\n", world_mpi_rank, cp++);
+ HDfprintf(stderr, "%d: cp = %d\n", world_mpi_rank, cp++);
}
}
@@ -6629,9 +6552,9 @@ smoke_check_5(int metadata_write_strategy)
if ( world_mpi_rank == 0 ) {
- if ( max_nerrors == 0 ) {
+ if ( max_nerrors == 0 ) {
- PASSED();
+ PASSED();
} else {
@@ -6646,10 +6569,10 @@ smoke_check_5(int metadata_write_strategy)
} /* smoke_check_5() */
-
+
/*****************************************************************************
*
- * Function: trace_file_check()
+ * Function: trace_file_check()
*
* Purpose: A basic test of the trace file capability. In essence,
* we invoke all operations that generate trace file output,
@@ -6679,11 +6602,11 @@ smoke_check_5(int metadata_write_strategy)
*
* This test is skipped if H5_METADATA_TRACE_FILE is undefined.
*
- * Return: Success: TRUE
+ * Return: Success: TRUE
*
- * Failure: FALSE
+ * Failure: FALSE
*
- * Programmer: JRM -- 6/13/06
+ * Programmer: JRM -- 6/13/06
*
*****************************************************************************/
static hbool_t
@@ -6767,27 +6690,23 @@ trace_file_check(int metadata_write_strategy)
#endif /* H5_METADATA_TRACE_FILE */
- switch ( metadata_write_strategy ) {
+ switch(metadata_write_strategy) {
- case H5AC_METADATA_WRITE_STRATEGY__PROCESS_0_ONLY:
+ case H5AC_METADATA_WRITE_STRATEGY__PROCESS_0_ONLY:
#ifdef H5_METADATA_TRACE_FILE
expected_output = &expected_output_0;
#endif /* H5_METADATA_TRACE_FILE */
- if ( world_mpi_rank == 0 ) {
- TESTING(
- "trace file collection -- process 0 only md write strategy");
- }
- break;
+ if(world_mpi_rank == 0)
+ TESTING("trace file collection -- process 0 only md write strategy");
+ break;
- case H5AC_METADATA_WRITE_STRATEGY__DISTRIBUTED:
+ case H5AC_METADATA_WRITE_STRATEGY__DISTRIBUTED:
#ifdef H5_METADATA_TRACE_FILE
expected_output = &expected_output_1;
#endif /* H5_METADATA_TRACE_FILE */
- if ( world_mpi_rank == 0 ) {
- TESTING(
- "trace file collection -- distributed md write strategy");
- }
- break;
+ if(world_mpi_rank == 0)
+ TESTING("trace file collection -- distributed md write strategy");
+ break;
default:
#ifdef H5_METADATA_TRACE_FILE
@@ -6796,11 +6715,10 @@ trace_file_check(int metadata_write_strategy)
*/
expected_output = &expected_output_0;
#endif /* H5_METADATA_TRACE_FILE */
- if ( world_mpi_rank == 0 ) {
- TESTING("trace file collection -- unknown md write strategy");
- }
- break;
- }
+ if(world_mpi_rank == 0)
+ TESTING("trace file collection -- unknown md write strategy");
+ break;
+ } /* end switch */
#ifdef H5_METADATA_TRACE_FILE
@@ -6808,145 +6726,115 @@ trace_file_check(int metadata_write_strategy)
init_data();
reset_stats();
- if ( world_mpi_rank == world_server_mpi_rank ) {
+ if(world_mpi_rank == world_server_mpi_rank) {
- if ( ! server_main() ) {
+ if(!server_main()) {
/* some error occured in the server -- report failure */
nerrors++;
- if ( verbose ) {
- HDfprintf(stdout, "%d:%s: server_main() failed.\n",
- world_mpi_rank, fcn_name);
- }
+ if ( verbose )
+ HDfprintf(stdout, "%d:%s: server_main() failed.\n", world_mpi_rank, fcn_name);
}
}
- else /* run the clients */
- {
+ else {
+ /* run the clients */
- if ( ! setup_cache_for_test(&fid, &file_ptr, &cache_ptr,
- metadata_write_strategy) ) {
+ if(!setup_cache_for_test(&fid, &file_ptr, &cache_ptr, metadata_write_strategy) ) {
nerrors++;
fid = -1;
cache_ptr = NULL;
- if ( verbose ) {
- HDfprintf(stdout, "%d:%s: setup_cache_for_test() failed.\n",
- world_mpi_rank, fcn_name);
- }
+ if(verbose)
+ HDfprintf(stdout, "%d:%s: setup_cache_for_test() failed.\n", world_mpi_rank, fcn_name);
}
- if ( nerrors == 0 ) {
+ if(nerrors == 0) {
config.version = H5AC__CURR_CACHE_CONFIG_VERSION;
- if ( H5AC_get_cache_auto_resize_config(cache_ptr, &config)
- != SUCCEED ) {
-
- nerrors++;
- HDfprintf(stdout,
- "%d:%s: H5AC_get_cache_auto_resize_config() failed.\n",
- world_mpi_rank, fcn_name);
-
- } else {
-
+ if(H5AC_get_cache_auto_resize_config(cache_ptr, &config) != SUCCEED) {
+ nerrors++;
+ HDfprintf(stdout, "%d:%s: H5AC_get_cache_auto_resize_config() failed.\n", world_mpi_rank, fcn_name);
+ }
+ else {
config.open_trace_file = TRUE;
- strcpy(config.trace_file_name, "t_cache_trace.txt");
+ strcpy(config.trace_file_name, "t_cache_trace.txt");
- if ( H5AC_set_cache_auto_resize_config(cache_ptr, &config)
- != SUCCEED ) {
-
- nerrors++;
- HDfprintf(stdout,
- "%d:%s: H5AC_set_cache_auto_resize_config() failed.\n",
- world_mpi_rank, fcn_name);
+ if(H5AC_set_cache_auto_resize_config(cache_ptr, &config) != SUCCEED) {
+ nerrors++;
+ HDfprintf(stdout, "%d:%s: H5AC_set_cache_auto_resize_config() failed.\n", world_mpi_rank, fcn_name);
}
}
- }
+ } /* end if */
- insert_entry(cache_ptr, file_ptr, 0, H5AC__NO_FLAGS_SET);
- insert_entry(cache_ptr, file_ptr, 1, H5AC__NO_FLAGS_SET);
- insert_entry(cache_ptr, file_ptr, 2, H5AC__NO_FLAGS_SET);
- insert_entry(cache_ptr, file_ptr, 3, H5AC__NO_FLAGS_SET);
+ insert_entry(cache_ptr, file_ptr, 0, H5AC__NO_FLAGS_SET);
+ insert_entry(cache_ptr, file_ptr, 1, H5AC__NO_FLAGS_SET);
+ insert_entry(cache_ptr, file_ptr, 2, H5AC__NO_FLAGS_SET);
+ insert_entry(cache_ptr, file_ptr, 3, H5AC__NO_FLAGS_SET);
- lock_entry(file_ptr, 0);
- mark_entry_dirty(0);
- unlock_entry(file_ptr, 0, H5AC__NO_FLAGS_SET);
+ lock_entry(file_ptr, 0);
+ mark_entry_dirty(0);
+ unlock_entry(file_ptr, 0, H5AC__NO_FLAGS_SET);
- lock_entry(file_ptr, 1);
+ lock_entry(file_ptr, 1);
pin_protected_entry(1, TRUE);
- unlock_entry(file_ptr, 1, H5AC__NO_FLAGS_SET);
+ unlock_entry(file_ptr, 1, H5AC__NO_FLAGS_SET);
unpin_entry(file_ptr, 1, TRUE, FALSE, FALSE);
expunge_entry(file_ptr, 1);
- lock_entry(file_ptr, 2);
+ lock_entry(file_ptr, 2);
pin_protected_entry(2, TRUE);
- unlock_entry(file_ptr, 2, H5AC__NO_FLAGS_SET);
- mark_entry_dirty(2);
+ unlock_entry(file_ptr, 2, H5AC__NO_FLAGS_SET);
+ mark_entry_dirty(2);
resize_entry(2, data[2].len / 2);
resize_entry(2, data[2].len);
unpin_entry(file_ptr, 2, TRUE, FALSE, FALSE);
- move_entry(file_ptr, 0, 20);
- move_entry(file_ptr, 0, 20);
+ move_entry(file_ptr, 0, 20);
+ move_entry(file_ptr, 0, 20);
- if ( H5Fflush(fid, H5F_SCOPE_GLOBAL) < 0 ) {
+ if(H5Fflush(fid, H5F_SCOPE_GLOBAL) < 0) {
nerrors++;
- if ( verbose ) {
- HDfprintf(stdout, "%d:%s: H5Fflush() failed.\n",
- world_mpi_rank, fcn_name);
- }
+ if(verbose)
+ HDfprintf(stdout, "%d:%s: H5Fflush() failed.\n", world_mpi_rank, fcn_name);
}
- if ( nerrors == 0 ) {
-
+ if(nerrors == 0) {
config.version = H5AC__CURR_CACHE_CONFIG_VERSION;
- if ( H5AC_get_cache_auto_resize_config(cache_ptr, &config)
- != SUCCEED ) {
-
- nerrors++;
- HDfprintf(stdout,
- "%d:%s: H5AC_get_cache_auto_resize_config() failed.\n",
- world_mpi_rank, fcn_name);
-
- } else {
-
+ if(H5AC_get_cache_auto_resize_config(cache_ptr, &config) != SUCCEED) {
+ nerrors++;
+ HDfprintf(stdout, "%d:%s: H5AC_get_cache_auto_resize_config() failed.\n", world_mpi_rank, fcn_name);
+ }
+ else {
config.open_trace_file = FALSE;
config.close_trace_file = TRUE;
- config.trace_file_name[0] = '\0';
+ config.trace_file_name[0] = '\0';
- if ( H5AC_set_cache_auto_resize_config(cache_ptr, &config)
- != SUCCEED ) {
-
- nerrors++;
- HDfprintf(stdout,
- "%d:%s: H5AC_set_cache_auto_resize_config() failed.\n",
- world_mpi_rank, fcn_name);
+ if(H5AC_set_cache_auto_resize_config(cache_ptr, &config) != SUCCEED) {
+ nerrors++;
+ HDfprintf(stdout, "%d:%s: H5AC_set_cache_auto_resize_config() failed.\n", world_mpi_rank, fcn_name);
}
}
- }
-
- if ( fid >= 0 ) {
+ } /* end if */
- if ( ! take_down_cache(fid) ) {
+ if(fid >= 0) {
+ if(!take_down_cache(fid)) {
nerrors++;
- if ( verbose ) {
- HDfprintf(stdout, "%d:%s: take_down_cache() failed.\n",
- world_mpi_rank, fcn_name);
- }
+ if(verbose)
+ HDfprintf(stdout, "%d:%s: take_down_cache() failed.\n", world_mpi_rank, fcn_name);
}
- }
+ } /* end if */
/* verify that all instance of datum are back where the started
* and are clean.
*/
- for ( i = 0; i < NUM_DATA_ENTRIES; i++ )
- {
- HDassert( data_index[i] == i );
- HDassert( ! (data[i].dirty) );
+ for(i = 0; i < NUM_DATA_ENTRIES; i++) {
+ HDassert(data_index[i] == i);
+ HDassert(!(data[i].dirty));
}
/* compose the done message */
@@ -6960,113 +6848,92 @@ trace_file_check(int metadata_write_strategy)
mssg.count = 0; /* not used */
mssg.magic = MSSG_MAGIC;
- if ( success ) {
-
+ if(success) {
success = send_mssg(&mssg, FALSE);
- if ( ! success ) {
-
+ if(!success) {
nerrors++;
- if ( verbose ) {
- HDfprintf(stdout, "%d:%s: send_mssg() failed on done.\n",
- world_mpi_rank, fcn_name);
- }
+ if(verbose)
+ HDfprintf(stdout, "%d:%s: send_mssg() failed on done.\n", world_mpi_rank, fcn_name);
}
- }
+ } /* end if */
- if ( nerrors == 0 ) {
+ nerrors++;
+ if(verbose)
+ HDfprintf(stdout, "%d:%s: send_mssg() failed on done.\n", world_mpi_rank, fcn_name);
- sprintf(trace_file_name, "t_cache_trace.txt.%d",
- (int)file_mpi_rank);
+ if(nerrors == 0) {
+ HDsprintf(trace_file_name, "t_cache_trace.txt.%d", (int)file_mpi_rank);
- if ( (trace_file_ptr = HDfopen(trace_file_name, "r")) == NULL ) {
+ if((trace_file_ptr = HDfopen(trace_file_name, "r")) == NULL ) {
nerrors++;
- if ( verbose ) {
- HDfprintf(stdout, "%d:%s: HDfopen failed.\n",
- world_mpi_rank, fcn_name);
- }
+ if(verbose)
+ HDfprintf(stdout, "%d:%s: HDfopen failed.\n", world_mpi_rank, fcn_name);
}
- }
-
- i = 0;
- while ( ( nerrors == 0 ) && ( ! done ) )
- {
- if ( (*expected_output)[i] == NULL ) {
-
- expected_line_len = 0;
-
- } else {
-
- expected_line_len = HDstrlen((*expected_output)[i]);
- }
-
- if ( HDfgets(buffer, 255, trace_file_ptr) != NULL ) {
-
- actual_line_len = strlen(buffer);
-
- } else {
-
- actual_line_len = 0;
- }
+ }
- if ( ( actual_line_len == 0 ) && ( expected_line_len == 0 ) ) {
+ i = 0;
+ while((nerrors == 0) && (!done)) {
+ /* Get lines of actual and expected data */
+ if((*expected_output)[i] == NULL)
+ expected_line_len = (size_t)0;
+ else
+ expected_line_len = HDstrlen((*expected_output)[i]);
- done = TRUE;
+ if(HDfgets(buffer, 255, trace_file_ptr) != NULL)
+ actual_line_len = HDstrlen(buffer);
+ else
+ actual_line_len = (size_t)0;
- } else if ( ( actual_line_len != expected_line_len ) ||
- ( HDstrcmp(buffer, (*expected_output)[i]) != 0 ) ) {
+ /* Compare the lines */
+ /* Handle running out of data */
+ if((actual_line_len == 0) || (expected_line_len == 0)) {
+ done = TRUE;
+ }
+ else if((actual_line_len != expected_line_len) || (HDstrcmp(buffer, (*expected_output)[i]) != 0)) {
- nerrors++;
- if ( verbose ) {
- HDfprintf(stdout,
- "%d:%s: Unexpected data in trace file line %d.\n",
- world_mpi_rank, fcn_name, i);
- HDfprintf(stdout, "%d:%s: expected = \"%s\" %d\n",
- world_mpi_rank, fcn_name, (*expected_output)[i],
- expected_line_len);
- HDfprintf(stdout, "%d:%s: actual = \"%s\" %d\n",
- world_mpi_rank, fcn_name, buffer,
- actual_line_len);
+ nerrors++;
+ if(verbose) {
+ HDfprintf(stdout, "%d:%s: Unexpected data in trace file line %d.\n", world_mpi_rank, fcn_name, i);
+ HDfprintf(stdout, "%d:%s: expected = \"%s\" %d\n", world_mpi_rank, fcn_name, (*expected_output)[i], expected_line_len);
+ HDfprintf(stdout, "%d:%s: actual = \"%s\" %d\n", world_mpi_rank, fcn_name, buffer, actual_line_len);
}
- } else {
- i++;
- }
- }
-
- if ( trace_file_ptr != NULL ) {
+ }
+ else {
+ i++;
+ }
+ }
- HDfclose(trace_file_ptr);
- trace_file_ptr = NULL;
+ /* Clean up the trace file */
+ if(trace_file_ptr != NULL) {
+ HDfclose(trace_file_ptr);
+ trace_file_ptr = NULL;
#if 1
- HDremove(trace_file_name);
+ HDremove(trace_file_name);
#endif
}
}
max_nerrors = get_max_nerrors();
- if ( world_mpi_rank == 0 ) {
-
- if ( max_nerrors == 0 ) {
-
- PASSED();
-
- } else {
+ if(world_mpi_rank == 0) {
+ if(max_nerrors == 0) {
+ PASSED();
+ }
+ else {
failures++;
H5_FAILED();
}
}
- success = ( ( success ) && ( max_nerrors == 0 ) );
+ success = ((success) && (max_nerrors == 0));
#else /* H5_METADATA_TRACE_FILE */
- if ( world_mpi_rank == 0 ) {
-
+ if(world_mpi_rank == 0) {
SKIPPED();
-
HDfprintf(stdout, " trace file support disabled.\n");
}
@@ -7079,22 +6946,17 @@ trace_file_check(int metadata_write_strategy)
/*****************************************************************************
*
- * Function: main()
- *
- * Purpose: Main function for the parallel cache test.
+ * Function: main()
*
- * Return: Success: 0
+ * Purpose: Main function for the parallel cache test.
*
- * Failure: 1
+ * Return: Success: 0
*
- * Programmer: JRM -- 12/23/05
+ * Failure: 1
*
- * Modifications:
- *
- * None.
+ * Programmer: JRM -- 12/23/05
*
*****************************************************************************/
-
int
main(int argc, char **argv)
{
@@ -7120,7 +6982,8 @@ main(int argc, char **argv)
* calls. By then, MPI calls may not work.
*/
if (H5dont_atexit() < 0){
- printf("Failed to turn off atexit processing. Continue.\n", mpi_rank);
+ printf("%d:Failed to turn off atexit processing. Continue.\n",
+ mpi_rank);
};
H5open();
@@ -7130,32 +6993,32 @@ main(int argc, char **argv)
#endif /* JRM */
if ( express_test ) {
- virt_num_data_entries = EXPRESS_VIRT_NUM_DATA_ENTRIES;
+ virt_num_data_entries = EXPRESS_VIRT_NUM_DATA_ENTRIES;
} else {
- virt_num_data_entries = STD_VIRT_NUM_DATA_ENTRIES;
+ virt_num_data_entries = STD_VIRT_NUM_DATA_ENTRIES;
}
#ifdef H5_HAVE_MPE
- if ( MAINPROCESS ) { printf(" Tests compiled for MPE.\n"); }
+ if ( MAINPROCESS ) { printf(" Tests compiled for MPE.\n"); }
virt_num_data_entries = MPE_VIRT_NUM_DATA_ENTIES;
#endif /* H5_HAVE_MPE */
if (MAINPROCESS){
- printf("===================================\n");
- printf("Parallel metadata cache tests\n");
- printf(" mpi_size = %d\n", mpi_size);
- printf(" express_test = %d\n", express_test);
- printf("===================================\n");
+ printf("===================================\n");
+ printf("Parallel metadata cache tests\n");
+ printf(" mpi_size = %d\n", mpi_size);
+ printf(" express_test = %d\n", express_test);
+ printf("===================================\n");
}
if ( mpi_size < 3 ) {
if ( MAINPROCESS ) {
- printf(" Need at least 3 processes. Exiting.\n");
+ printf(" Need at least 3 processes. Exiting.\n");
}
goto finish;
}
@@ -7174,8 +7037,8 @@ main(int argc, char **argv)
/* setup file access property list with the world communicator */
if ( FAIL == (fapl = H5Pcreate(H5P_FILE_ACCESS)) ) {
nerrors++;
- if ( verbose ) {
- HDfprintf(stdout, "%d:%s: H5Pcreate() failed 1.\n",
+ if ( verbose ) {
+ HDfprintf(stdout, "%d:%s: H5Pcreate() failed 1.\n",
world_mpi_rank, fcn_name);
}
}
@@ -7207,8 +7070,8 @@ main(int argc, char **argv)
/* close the fapl before we set it up again */
if ( H5Pclose(fapl) < 0 ) {
nerrors++;
- if ( verbose ) {
- HDfprintf(stdout, "%d:%s: H5Pclose() failed.\n",
+ if ( verbose ) {
+ HDfprintf(stdout, "%d:%s: H5Pclose() failed.\n",
world_mpi_rank, fcn_name);
}
}
@@ -7218,9 +7081,9 @@ main(int argc, char **argv)
/* setup file access property list */
if ( FAIL == (fapl = H5Pcreate(H5P_FILE_ACCESS)) ) {
- nerrors++;
- if ( verbose ) {
- HDfprintf(stdout, "%d:%s: H5Pcreate() failed 2.\n",
+ nerrors++;
+ if ( verbose ) {
+ HDfprintf(stdout, "%d:%s: H5Pcreate() failed 2.\n",
world_mpi_rank, fcn_name);
}
}
@@ -7228,8 +7091,8 @@ main(int argc, char **argv)
if ( H5Pset_fapl_mpio(fapl, file_mpi_comm, MPI_INFO_NULL) < 0 ) {
nerrors++;
- if ( verbose ) {
- HDfprintf(stdout, "%d:%s: H5Pset_fapl_mpio() failed 2.\n",
+ if ( verbose ) {
+ HDfprintf(stdout, "%d:%s: H5Pset_fapl_mpio() failed 2.\n",
world_mpi_rank, fcn_name);
}
}
@@ -7247,7 +7110,7 @@ main(int argc, char **argv)
HDfprintf(stdout, "Errors in test initialization. Exiting.\n");
}
- goto finish;
+ goto finish;
}
/* run the tests */
@@ -7284,16 +7147,16 @@ finish:
* and exit.
*/
MPI_Barrier(MPI_COMM_WORLD);
- if (MAINPROCESS){ /* only process 0 reports */
- printf("===================================\n");
- if (failures){
- printf("***metadata cache tests detected %d failures***\n",
+ if (MAINPROCESS){ /* only process 0 reports */
+ printf("===================================\n");
+ if (failures){
+ printf("***metadata cache tests detected %d failures***\n",
failures);
- }
- else{
- printf("metadata cache tests finished with no failures\n");
- }
- printf("===================================\n");
+ }
+ else{
+ printf("metadata cache tests finished with no failures\n");
+ }
+ printf("===================================\n");
}
takedown_derived_types();
diff --git a/testpar/t_chunk_alloc.c b/testpar/t_chunk_alloc.c
index 8b3ede5..bfa0bfe 100644
--- a/testpar/t_chunk_alloc.c
+++ b/testpar/t_chunk_alloc.c
@@ -20,23 +20,23 @@
*/
#include "testphdf5.h"
-static int mpi_size, mpi_rank;
+static int mpi_size, mpi_rank;
#define DSET_NAME "ExtendibleArray"
-#define CHUNK_SIZE 1000 /* #elements per chunk */
-#define CHUNK_FACTOR 200 /* default dataset size in terms of chunks */
+#define CHUNK_SIZE 1000 /* #elements per chunk */
+#define CHUNK_FACTOR 200 /* default dataset size in terms of chunks */
#define CLOSE 1
#define NO_CLOSE 0
static MPI_Offset
get_filesize(const char *filename)
{
- int mpierr;
- MPI_File fd;
- MPI_Offset filesize;
+ int mpierr;
+ MPI_File fd;
+ MPI_Offset filesize;
- mpierr = MPI_File_open(MPI_COMM_SELF, (char*)filename, MPI_MODE_RDONLY,
- MPI_INFO_NULL, &fd);
+ mpierr = MPI_File_open(MPI_COMM_SELF, filename, MPI_MODE_RDONLY,
+ MPI_INFO_NULL, &fd);
VRFY((mpierr == MPI_SUCCESS), "");
mpierr = MPI_File_get_size(fd, &filesize);
@@ -85,15 +85,15 @@ create_chunked_dataset(const char *filename, int chunk_factor, write_type write_
long nchunks;
herr_t hrc;
- MPI_Offset filesize, /* actual file size */
- est_filesize; /* estimated file size */
+ MPI_Offset filesize, /* actual file size */
+ est_filesize; /* estimated file size */
/* set up MPI parameters */
MPI_Comm_size(MPI_COMM_WORLD,&mpi_size);
MPI_Comm_rank(MPI_COMM_WORLD,&mpi_rank);
/* Only MAINPROCESS should create the file. Others just wait. */
- if (MAINPROCESS) {
+ if (MAINPROCESS){
nchunks=chunk_factor*mpi_size;
dims[0]=nchunks*CHUNK_SIZE;
/* Create the data space with unlimited dimensions. */
@@ -103,10 +103,9 @@ create_chunked_dataset(const char *filename, int chunk_factor, write_type write_
memspace = H5Screate_simple(1, chunk_dims, NULL);
VRFY((memspace >= 0), "");
- /* Create a new file. If file exists its contents will be overwritten. */
- file_id = H5Fcreate(filename, H5F_ACC_TRUNC, H5P_DEFAULT,
- H5P_DEFAULT);
- VRFY((file_id >= 0), "H5Fcreate");
+ /* Create a new file. If file exists its contents will be overwritten. */
+ file_id = H5Fcreate(filename, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
+ VRFY((file_id >= 0), "H5Fcreate");
/* Modify dataset creation properties, i.e. enable chunking */
cparms = H5Pcreate(H5P_DATASET_CREATE);
@@ -131,7 +130,7 @@ create_chunked_dataset(const char *filename, int chunk_factor, write_type write_
offset[0] = (nchunks-2)*chunk_dims[0];
hrc = H5Sselect_hyperslab(dataspace, H5S_SELECT_SET, offset, stride, count, block);
- VRFY((hrc >= 0), "");
+ VRFY((hrc >= 0), "");
/* Write sec_last chunk */
hrc = H5Dwrite(dataset, H5T_NATIVE_UCHAR, memspace, dataspace, H5P_DEFAULT, buffer);
@@ -200,8 +199,8 @@ parallel_access_dataset(const char *filename, int chunk_factor, access_type acti
int i;
long nchunks;
/* MPI Gubbins */
- MPI_Offset filesize, /* actual file size */
- est_filesize; /* estimated file size */
+ MPI_Offset filesize, /* actual file size */
+ est_filesize; /* estimated file size */
/* Initialize MPI */
MPI_Comm_size(MPI_COMM_WORLD,&mpi_size);
@@ -241,19 +240,19 @@ parallel_access_dataset(const char *filename, int chunk_factor, access_type acti
/* all chunks are written by all the processes in an interleaved way*/
case write_all:
- memset(buffer, mpi_rank+1, CHUNK_SIZE);
- count[0] = 1;
- stride[0] = 1;
- block[0] = chunk_dims[0];
- for (i=0; i<nchunks/mpi_size; i++){
- offset[0] = (i*mpi_size+mpi_rank)*chunk_dims[0];
+ HDmemset(buffer, mpi_rank+1, CHUNK_SIZE);
+ count[0] = 1;
+ stride[0] = 1;
+ block[0] = chunk_dims[0];
+ for (i=0; i<nchunks/mpi_size; i++) {
+ offset[0] = (i*mpi_size+mpi_rank)*chunk_dims[0];
- hrc = H5Sselect_hyperslab(dataspace, H5S_SELECT_SET, offset, stride, count, block);
- VRFY((hrc >= 0), "");
+ hrc = H5Sselect_hyperslab(dataspace, H5S_SELECT_SET, offset, stride, count, block);
+ VRFY((hrc >= 0), "");
- /* Write the buffer out */
- hrc = H5Dwrite(*dataset, H5T_NATIVE_UCHAR, memspace, dataspace, H5P_DEFAULT, buffer);
- VRFY((hrc >= 0), "H5Dwrite");
+ /* Write the buffer out */
+ hrc = H5Dwrite(*dataset, H5T_NATIVE_UCHAR, memspace, dataspace, H5P_DEFAULT, buffer);
+ VRFY((hrc >= 0), "H5Dwrite");
}
break;
@@ -273,8 +272,9 @@ parallel_access_dataset(const char *filename, int chunk_factor, access_type acti
/* only opens the *dataset */
case open_only:
-
break;
+ default:
+ HDassert(0);
}
/* Close up */
@@ -317,7 +317,8 @@ parallel_access_dataset(const char *filename, int chunk_factor, access_type acti
* interleaved pattern.
*/
static void
-verify_data(const char *filename, int chunk_factor, write_type write_pattern, int close, hid_t *file_id, hid_t *dataset)
+verify_data(const char *filename, int chunk_factor, write_type write_pattern, int vclose,
+ hid_t *file_id, hid_t *dataset)
{
/* HDF5 gubbins */
hid_t dataspace, memspace; /* HDF5 file identifier */
@@ -332,7 +333,7 @@ verify_data(const char *filename, int chunk_factor, write_type write_pattern, in
/* Variables used in reading data back */
char buffer[CHUNK_SIZE];
int value, i;
- int index;
+ int index_l;
long nchunks;
/* Initialize MPI */
MPI_Comm_size(MPI_COMM_WORLD,&mpi_size);
@@ -370,8 +371,8 @@ verify_data(const char *filename, int chunk_factor, write_type write_pattern, in
stride[0] = 1;
block[0] = chunk_dims[0];
for (i=0; i<nchunks; i++){
- /* reset buffer values */
- memset(buffer, -1, CHUNK_SIZE);
+ /* reset buffer values */
+ HDmemset(buffer, -1, CHUNK_SIZE);
offset[0] = i*chunk_dims[0];
@@ -383,37 +384,40 @@ verify_data(const char *filename, int chunk_factor, write_type write_pattern, in
VRFY((hrc >= 0), "H5Dread");
/* set expected value according the write pattern */
- switch (write_pattern) {
- case all:
- value = i%mpi_size + 1;
- break;
- case none:
- value = 0;
- break;
- case sec_last:
- if (i==nchunks-2)
- value = 100;
- else
- value = 0;
- }
+ switch (write_pattern) {
+ case all:
+ value = i%mpi_size + 1;
+ break;
+ case none:
+ value = 0;
+ break;
+ case sec_last:
+ if (i==nchunks-2)
+ value = 100;
+ else
+ value = 0;
+ break;
+ default:
+ HDassert(0);
+ }
/* verify content of the chunk */
- for (index = 0; index < CHUNK_SIZE; index++)
- VRFY((buffer[index] == value), "data verification");
+ for (index_l = 0; index_l < CHUNK_SIZE; index_l++)
+ VRFY((buffer[index_l] == value), "data verification");
}
hrc = H5Sclose (dataspace);
- VRFY((hrc >= 0), "");
+ VRFY((hrc >= 0), "");
- hrc = H5Sclose (memspace);
- VRFY((hrc >= 0), "");
+ hrc = H5Sclose (memspace);
+ VRFY((hrc >= 0), "");
/* Can close some plists */
hrc = H5Pclose(access_plist);
VRFY((hrc >= 0), "");
/* Close up */
- if (close){
+ if (vclose){
hrc = H5Dclose(*dataset);
VRFY((hrc >= 0), "");
*dataset = -1;
@@ -462,9 +466,9 @@ test_chunk_alloc(void)
MPI_Comm_size(MPI_COMM_WORLD,&mpi_size);
MPI_Comm_rank(MPI_COMM_WORLD,&mpi_rank);
- filename = GetTestParameters();
+ filename = (const char*)GetTestParameters();
if (VERBOSE_MED)
- printf("Extend Chunked allocation test on file %s\n", filename);
+ HDprintf("Extend Chunked allocation test on file %s\n", filename);
/* Case 1 */
/* Create chunked dataset without writing anything.*/
diff --git a/testpar/t_dset.c b/testpar/t_dset.c
index 29d6dcf..68f96da 100644
--- a/testpar/t_dset.c
+++ b/testpar/t_dset.c
@@ -36,83 +36,91 @@
* Setup the dimensions of the hyperslab.
* Two modes--by rows or by columns.
* Assume dimension rank is 2.
- * BYROW divide into slabs of rows
- * BYCOL divide into blocks of columns
- * ZROW same as BYROW except process 0 gets 0 rows
- * ZCOL same as BYCOL except process 0 gets 0 columns
+ * BYROW divide into slabs of rows
+ * BYCOL divide into blocks of columns
+ * ZROW same as BYROW except process 0 gets 0 rows
+ * ZCOL same as BYCOL except process 0 gets 0 columns
*/
static void
slab_set(int mpi_rank, int mpi_size, hsize_t start[], hsize_t count[],
- hsize_t stride[], hsize_t block[], int mode)
+ hsize_t stride[], hsize_t block[], int mode)
{
- switch (mode){
+ switch (mode) {
case BYROW:
- /* Each process takes a slabs of rows. */
- block[0] = dim0/mpi_size;
- block[1] = dim1;
- stride[0] = block[0];
- stride[1] = block[1];
- count[0] = 1;
- count[1] = 1;
- start[0] = mpi_rank*block[0];
- start[1] = 0;
-if(VERBOSE_MED) printf("slab_set BYROW\n");
- break;
+ /* Each process takes a slabs of rows. */
+ block[0] = dim0 / mpi_size;
+ block[1] = dim1;
+ stride[0] = block[0];
+ stride[1] = block[1];
+ count[0] = 1;
+ count[1] = 1;
+ start[0] = mpi_rank * block[0];
+ start[1] = 0;
+ if (VERBOSE_MED)
+ HDprintf("slab_set BYROW\n");
+ break;
case BYCOL:
- /* Each process takes a block of columns. */
- block[0] = dim0;
- block[1] = dim1/mpi_size;
- stride[0] = block[0];
- stride[1] = block[1];
- count[0] = 1;
- count[1] = 1;
- start[0] = 0;
- start[1] = mpi_rank*block[1];
-if(VERBOSE_MED) printf("slab_set BYCOL\n");
- break;
+ /* Each process takes a block of columns. */
+ block[0] = dim0;
+ block[1] = dim1 / mpi_size;
+ stride[0] = block[0];
+ stride[1] = block[1];
+ count[0] = 1;
+ count[1] = 1;
+ start[0] = 0;
+ start[1] = mpi_rank * block[1];
+ if (VERBOSE_MED)
+ HDprintf("slab_set BYCOL\n");
+ break;
case ZROW:
- /* Similar to BYROW except process 0 gets 0 row */
- block[0] = (mpi_rank ? dim0/mpi_size : 0);
- block[1] = dim1;
- stride[0] = (mpi_rank ? block[0] : 1); /* avoid setting stride to 0 */
- stride[1] = block[1];
- count[0] = 1;
- count[1] = 1;
- start[0] = (mpi_rank? mpi_rank*block[0] : 0);
- start[1] = 0;
-if(VERBOSE_MED) printf("slab_set ZROW\n");
- break;
+ /* Similar to BYROW except process 0 gets 0 row */
+ block[0] = (mpi_rank ? dim0 / mpi_size : 0);
+ block[1] = dim1;
+ stride[0] = (mpi_rank ? block[0] : 1); /* avoid setting stride to 0 */
+ stride[1] = block[1];
+ count[0] = 1;
+ count[1] = 1;
+ start[0] = (mpi_rank ? mpi_rank * block[0] : 0);
+ start[1] = 0;
+ if (VERBOSE_MED)
+ HDprintf("slab_set ZROW\n");
+ break;
case ZCOL:
- /* Similar to BYCOL except process 0 gets 0 column */
- block[0] = dim0;
- block[1] = (mpi_rank ? dim1/mpi_size : 0);
- stride[0] = block[0];
- stride[1] = (mpi_rank ? block[1] : 1); /* avoid setting stride to 0 */
- count[0] = 1;
- count[1] = 1;
- start[0] = 0;
- start[1] = (mpi_rank? mpi_rank*block[1] : 0);
-if(VERBOSE_MED) printf("slab_set ZCOL\n");
- break;
+ /* Similar to BYCOL except process 0 gets 0 column */
+ block[0] = dim0;
+ block[1] = (mpi_rank ? dim1 / mpi_size : 0);
+ stride[0] = block[0];
+ stride[1] = (mpi_rank ? block[1] : 1); /* avoid setting stride to 0 */
+ count[0] = 1;
+ count[1] = 1;
+ start[0] = 0;
+ start[1] = (mpi_rank ? mpi_rank * block[1] : 0);
+ if (VERBOSE_MED)
+ HDprintf("slab_set ZCOL\n");
+ break;
default:
- /* Unknown mode. Set it to cover the whole dataset. */
- printf("unknown slab_set mode (%d)\n", mode);
- block[0] = dim0;
- block[1] = dim1;
- stride[0] = block[0];
- stride[1] = block[1];
- count[0] = 1;
- count[1] = 1;
- start[0] = 0;
- start[1] = 0;
-if(VERBOSE_MED) printf("slab_set wholeset\n");
- break;
+ /* Unknown mode. Set it to cover the whole dataset. */
+ HDprintf("unknown slab_set mode (%d)\n", mode);
+ block[0] = dim0;
+ block[1] = dim1;
+ stride[0] = block[0];
+ stride[1] = block[1];
+ count[0] = 1;
+ count[1] = 1;
+ start[0] = 0;
+ start[1] = 0;
+ if (VERBOSE_MED)
+ HDprintf("slab_set wholeset\n");
+ break;
}
-if(VERBOSE_MED){
- printf("start[]=(%lu,%lu), count[]=(%lu,%lu), stride[]=(%lu,%lu), block[]=(%lu,%lu), total datapoints=%lu\n",
- (unsigned long)start[0], (unsigned long)start[1], (unsigned long)count[0], (unsigned long)count[1],
- (unsigned long)stride[0], (unsigned long)stride[1], (unsigned long)block[0], (unsigned long)block[1],
- (unsigned long)(block[0]*block[1]*count[0]*count[1]));
+ if (VERBOSE_MED) {
+ HDprintf(
+ "start[]=(%lu,%lu), count[]=(%lu,%lu), stride[]=(%lu,%lu), block[]=(%lu,%lu), total datapoints=%lu\n",
+ (unsigned long) start[0], (unsigned long) start[1],
+ (unsigned long) count[0], (unsigned long) count[1],
+ (unsigned long) stride[0], (unsigned long) stride[1],
+ (unsigned long) block[0], (unsigned long) block[1],
+ (unsigned long) (block[0] * block[1] * count[0] * count[1]));
}
}
@@ -123,7 +131,7 @@ void point_set(hsize_t start[],
hsize_t count[],
hsize_t stride[],
hsize_t block[],
- size_t num_points,
+ size_t num_points,
hsize_t coords[],
int order)
{
@@ -153,13 +161,13 @@ void point_set(hsize_t start[],
}
if(VERBOSE_MED) {
- printf("start[]=(%lu, %lu), count[]=(%lu, %lu), stride[]=(%lu, %lu), block[]=(%lu, %lu), total datapoints=%lu\n",
+ HDprintf("start[]=(%lu, %lu), count[]=(%lu, %lu), stride[]=(%lu, %lu), block[]=(%lu, %lu), total datapoints=%lu\n",
(unsigned long)start[0], (unsigned long)start[1], (unsigned long)count[0], (unsigned long)count[1],
(unsigned long)stride[0], (unsigned long)stride[1], (unsigned long)block[0], (unsigned long)block[1],
(unsigned long)(block[0] * block[1] * count[0] * count[1]));
k = 0;
for(i = 0; i < num_points ; i++) {
- printf("(%d, %d)\n", (int)coords[k], (int)coords[k + 1]);
+ HDprintf("(%d, %d)\n", (int)coords[k], (int)coords[k + 1]);
k += 2;
}
}
@@ -177,10 +185,10 @@ dataset_fill(hsize_t start[], hsize_t block[], DATATYPE * dataset)
/* put some trivial data in the data_array */
for (i=0; i < block[0]; i++){
- for (j=0; j < block[1]; j++){
- *dataptr = (DATATYPE)((i+start[0])*100 + (j+start[1]+1));
- dataptr++;
- }
+ for (j=0; j < block[1]; j++){
+ *dataptr = (DATATYPE)((i+start[0])*100 + (j+start[1]+1));
+ dataptr++;
+ }
}
}
@@ -195,19 +203,19 @@ dataset_print(hsize_t start[], hsize_t block[], DATATYPE * dataset)
hsize_t i, j;
/* print the column heading */
- printf("%-8s", "Cols:");
+ HDprintf("%-8s", "Cols:");
for (j=0; j < block[1]; j++){
- printf("%3lu ", (unsigned long)(start[1]+j));
+ HDprintf("%3lu ", (unsigned long)(start[1]+j));
}
- printf("\n");
+ HDprintf("\n");
/* print the slab data */
for (i=0; i < block[0]; i++){
- printf("Row %2lu: ", (unsigned long)(i+start[0]));
- for (j=0; j < block[1]; j++){
- printf("%03d ", *dataptr++);
- }
- printf("\n");
+ HDprintf("Row %2lu: ", (unsigned long)(i+start[0]));
+ for (j=0; j < block[1]; j++){
+ HDprintf("%03d ", *dataptr++);
+ }
+ HDprintf("\n");
}
}
@@ -223,35 +231,35 @@ dataset_vrfy(hsize_t start[], hsize_t count[], hsize_t stride[], hsize_t block[]
/* print it if VERBOSE_MED */
if(VERBOSE_MED) {
- printf("dataset_vrfy dumping:::\n");
- printf("start(%lu, %lu), count(%lu, %lu), stride(%lu, %lu), block(%lu, %lu)\n",
- (unsigned long)start[0], (unsigned long)start[1], (unsigned long)count[0], (unsigned long)count[1],
- (unsigned long)stride[0], (unsigned long)stride[1], (unsigned long)block[0], (unsigned long)block[1]);
- printf("original values:\n");
- dataset_print(start, block, original);
- printf("compared values:\n");
- dataset_print(start, block, dataset);
+ HDprintf("dataset_vrfy dumping:::\n");
+ HDprintf("start(%lu, %lu), count(%lu, %lu), stride(%lu, %lu), block(%lu, %lu)\n",
+ (unsigned long)start[0], (unsigned long)start[1], (unsigned long)count[0], (unsigned long)count[1],
+ (unsigned long)stride[0], (unsigned long)stride[1], (unsigned long)block[0], (unsigned long)block[1]);
+ HDprintf("original values:\n");
+ dataset_print(start, block, original);
+ HDprintf("compared values:\n");
+ dataset_print(start, block, dataset);
}
vrfyerrs = 0;
for (i=0; i < block[0]; i++){
- for (j=0; j < block[1]; j++){
- if(*dataset != *original){
- if(vrfyerrs++ < MAX_ERR_REPORT || VERBOSE_MED){
- printf("Dataset Verify failed at [%lu][%lu](row %lu, col %lu): expect %d, got %d\n",
- (unsigned long)i, (unsigned long)j,
- (unsigned long)(i+start[0]), (unsigned long)(j+start[1]),
- *(original), *(dataset));
- }
- dataset++;
- original++;
- }
- }
+ for (j=0; j < block[1]; j++){
+ if(*dataset != *original){
+ if(vrfyerrs++ < MAX_ERR_REPORT || VERBOSE_MED){
+ HDprintf("Dataset Verify failed at [%lu][%lu](row %lu, col %lu): expect %d, got %d\n",
+ (unsigned long)i, (unsigned long)j,
+ (unsigned long)(i+start[0]), (unsigned long)(j+start[1]),
+ *(original), *(dataset));
+ }
+ dataset++;
+ original++;
+ }
+ }
}
if(vrfyerrs > MAX_ERR_REPORT && !VERBOSE_MED)
- printf("[more errors ...]\n");
+ HDprintf("[more errors ...]\n");
if(vrfyerrs)
- printf("%d errors found in dataset_vrfy\n", vrfyerrs);
+ HDprintf("%d errors found in dataset_vrfy\n", vrfyerrs);
return(vrfyerrs);
}
@@ -272,20 +280,20 @@ void
dataset_writeInd(void)
{
hid_t fid; /* HDF5 file ID */
- hid_t acc_tpl; /* File access templates */
- hid_t sid; /* Dataspace ID */
- hid_t file_dataspace; /* File dataspace ID */
- hid_t mem_dataspace; /* memory dataspace ID */
- hid_t dataset1, dataset2; /* Dataset ID */
- hsize_t dims[RANK]; /* dataset dim sizes */
- DATATYPE *data_array1 = NULL; /* data buffer */
+ hid_t acc_tpl; /* File access templates */
+ hid_t sid; /* Dataspace ID */
+ hid_t file_dataspace; /* File dataspace ID */
+ hid_t mem_dataspace; /* memory dataspace ID */
+ hid_t dataset1, dataset2; /* Dataset ID */
+ hsize_t dims[RANK]; /* dataset dim sizes */
+ DATATYPE *data_array1 = NULL; /* data buffer */
const char *filename;
- hsize_t start[RANK]; /* for hyperslab setting */
- hsize_t count[RANK], stride[RANK]; /* for hyperslab setting */
- hsize_t block[RANK]; /* for hyperslab setting */
+ hsize_t start[RANK]; /* for hyperslab setting */
+ hsize_t count[RANK], stride[RANK]; /* for hyperslab setting */
+ hsize_t block[RANK]; /* for hyperslab setting */
- herr_t ret; /* Generic return value */
+ herr_t ret; /* Generic return value */
int mpi_size, mpi_rank;
MPI_Comm comm = MPI_COMM_WORLD;
@@ -293,7 +301,7 @@ dataset_writeInd(void)
filename = GetTestParameters();
if(VERBOSE_MED)
- printf("Independent write test on file %s\n", filename);
+ HDprintf("Independent write test on file %s\n", filename);
/* set up MPI parameters */
MPI_Comm_size(MPI_COMM_WORLD,&mpi_size);
@@ -332,12 +340,12 @@ dataset_writeInd(void)
/* create a dataset collectively */
dataset1 = H5Dcreate2(fid, DATASETNAME1, H5T_NATIVE_INT, sid,
- H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
VRFY((dataset1 >= 0), "H5Dcreate2 succeeded");
/* create another dataset collectively */
dataset2 = H5Dcreate2(fid, DATASETNAME2, H5T_NATIVE_INT, sid,
- H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
VRFY((dataset2 >= 0), "H5Dcreate2 succeeded");
@@ -366,28 +374,28 @@ dataset_writeInd(void)
/* write data independently */
ret = H5Dwrite(dataset1, H5T_NATIVE_INT, mem_dataspace, file_dataspace,
- H5P_DEFAULT, data_array1);
+ H5P_DEFAULT, data_array1);
VRFY((ret >= 0), "H5Dwrite dataset1 succeeded");
/* write data independently */
ret = H5Dwrite(dataset2, H5T_NATIVE_INT, mem_dataspace, file_dataspace,
- H5P_DEFAULT, data_array1);
+ H5P_DEFAULT, data_array1);
VRFY((ret >= 0), "H5Dwrite dataset2 succeeded");
/* setup dimensions again to write with zero rows for process 0 */
if(VERBOSE_MED)
- printf("writeInd by some with zero row\n");
+ HDprintf("writeInd by some with zero row\n");
slab_set(mpi_rank, mpi_size, start, count, stride, block, ZROW);
ret = H5Sselect_hyperslab(file_dataspace, H5S_SELECT_SET, start, stride, count, block);
VRFY((ret >= 0), "H5Sset_hyperslab succeeded");
/* need to make mem_dataspace to match for process 0 */
if(MAINPROCESS){
- ret = H5Sselect_hyperslab(mem_dataspace, H5S_SELECT_SET, start, stride, count, block);
- VRFY((ret >= 0), "H5Sset_hyperslab mem_dataspace succeeded");
+ ret = H5Sselect_hyperslab(mem_dataspace, H5S_SELECT_SET, start, stride, count, block);
+ VRFY((ret >= 0), "H5Sset_hyperslab mem_dataspace succeeded");
}
MESG("writeInd by some with zero row");
if((mpi_rank/2)*2 != mpi_rank){
ret = H5Dwrite(dataset1, H5T_NATIVE_INT, mem_dataspace, file_dataspace,
- H5P_DEFAULT, data_array1);
+ H5P_DEFAULT, data_array1);
VRFY((ret >= 0), "H5Dwrite dataset1 by ZROW succeeded");
}
#ifdef BARRIER_CHECKS
@@ -418,19 +426,19 @@ void
dataset_readInd(void)
{
hid_t fid; /* HDF5 file ID */
- hid_t acc_tpl; /* File access templates */
- hid_t file_dataspace; /* File dataspace ID */
- hid_t mem_dataspace; /* memory dataspace ID */
- hid_t dataset1, dataset2; /* Dataset ID */
- DATATYPE *data_array1 = NULL; /* data buffer */
- DATATYPE *data_origin1 = NULL; /* expected data buffer */
+ hid_t acc_tpl; /* File access templates */
+ hid_t file_dataspace; /* File dataspace ID */
+ hid_t mem_dataspace; /* memory dataspace ID */
+ hid_t dataset1, dataset2; /* Dataset ID */
+ DATATYPE *data_array1 = NULL; /* data buffer */
+ DATATYPE *data_origin1 = NULL; /* expected data buffer */
const char *filename;
- hsize_t start[RANK]; /* for hyperslab setting */
- hsize_t count[RANK], stride[RANK]; /* for hyperslab setting */
- hsize_t block[RANK]; /* for hyperslab setting */
+ hsize_t start[RANK]; /* for hyperslab setting */
+ hsize_t count[RANK], stride[RANK]; /* for hyperslab setting */
+ hsize_t block[RANK]; /* for hyperslab setting */
- herr_t ret; /* Generic return value */
+ herr_t ret; /* Generic return value */
int mpi_size, mpi_rank;
MPI_Comm comm = MPI_COMM_WORLD;
@@ -438,7 +446,7 @@ dataset_readInd(void)
filename = GetTestParameters();
if(VERBOSE_MED)
- printf("Independent read test on file %s\n", filename);
+ HDprintf("Independent read test on file %s\n", filename);
/* set up MPI parameters */
MPI_Comm_size(MPI_COMM_WORLD,&mpi_size);
@@ -455,7 +463,7 @@ dataset_readInd(void)
VRFY((acc_tpl >= 0), "");
/* open the file collectively */
- fid=H5Fopen(filename,H5F_ACC_RDONLY,acc_tpl);
+ fid = H5Fopen(filename, H5F_ACC_RDONLY, acc_tpl);
VRFY((fid >= 0), "");
/* Release file-access template */
@@ -489,7 +497,7 @@ dataset_readInd(void)
/* read data independently */
ret = H5Dread(dataset1, H5T_NATIVE_INT, mem_dataspace, file_dataspace,
- H5P_DEFAULT, data_array1);
+ H5P_DEFAULT, data_array1);
VRFY((ret >= 0), "");
/* verify the read data with original expected data */
@@ -498,7 +506,7 @@ dataset_readInd(void)
/* read data independently */
ret = H5Dread(dataset2, H5T_NATIVE_INT, mem_dataspace, file_dataspace,
- H5P_DEFAULT, data_array1);
+ H5P_DEFAULT, data_array1);
VRFY((ret >= 0), "");
/* verify the read data with original expected data */
@@ -540,28 +548,28 @@ void
dataset_writeAll(void)
{
hid_t fid; /* HDF5 file ID */
- hid_t acc_tpl; /* File access templates */
- hid_t xfer_plist; /* Dataset transfer properties list */
- hid_t sid; /* Dataspace ID */
- hid_t file_dataspace; /* File dataspace ID */
- hid_t mem_dataspace; /* memory dataspace ID */
+ hid_t acc_tpl; /* File access templates */
+ hid_t xfer_plist; /* Dataset transfer properties list */
+ hid_t sid; /* Dataspace ID */
+ hid_t file_dataspace; /* File dataspace ID */
+ hid_t mem_dataspace; /* memory dataspace ID */
hid_t dataset1, dataset2, dataset3, dataset4; /* Dataset ID */
hid_t dataset5, dataset6, dataset7; /* Dataset ID */
- hid_t datatype; /* Datatype ID */
- hsize_t dims[RANK]; /* dataset dim sizes */
- DATATYPE *data_array1 = NULL; /* data buffer */
+ hid_t datatype; /* Datatype ID */
+ hsize_t dims[RANK]; /* dataset dim sizes */
+ DATATYPE *data_array1 = NULL; /* data buffer */
const char *filename;
- hsize_t start[RANK]; /* for hyperslab setting */
- hsize_t count[RANK], stride[RANK]; /* for hyperslab setting */
- hsize_t block[RANK]; /* for hyperslab setting */
+ hsize_t start[RANK]; /* for hyperslab setting */
+ hsize_t count[RANK], stride[RANK]; /* for hyperslab setting */
+ hsize_t block[RANK]; /* for hyperslab setting */
size_t num_points; /* for point selection */
hsize_t *coords = NULL; /* for point selection */
hsize_t current_dims; /* for point selection */
int i;
- herr_t ret; /* Generic return value */
+ herr_t ret; /* Generic return value */
int mpi_size, mpi_rank;
MPI_Comm comm = MPI_COMM_WORLD;
@@ -569,7 +577,7 @@ dataset_writeAll(void)
filename = GetTestParameters();
if(VERBOSE_MED)
- printf("Collective write test on file %s\n", filename);
+ HDprintf("Collective write test on file %s\n", filename);
/* set up MPI parameters */
MPI_Comm_size(MPI_COMM_WORLD,&mpi_size);
@@ -669,8 +677,8 @@ dataset_writeAll(void)
dataset_fill(start, block, data_array1);
MESG("data_array initialized");
if(VERBOSE_MED){
- MESG("data_array created");
- dataset_print(start, block, data_array1);
+ MESG("data_array created");
+ dataset_print(start, block, data_array1);
}
/* set up the collective transfer properties list */
@@ -679,31 +687,31 @@ dataset_writeAll(void)
ret = H5Pset_dxpl_mpio(xfer_plist, H5FD_MPIO_COLLECTIVE);
VRFY((ret >= 0), "H5Pset_dxpl_mpio succeeded");
if(dxfer_coll_type == DXFER_INDEPENDENT_IO) {
- ret = H5Pset_dxpl_mpio_collective_opt(xfer_plist,H5FD_MPIO_INDIVIDUAL_IO);
- VRFY((ret>= 0),"set independent IO collectively succeeded");
+ ret = H5Pset_dxpl_mpio_collective_opt(xfer_plist,H5FD_MPIO_INDIVIDUAL_IO);
+ VRFY((ret>= 0),"set independent IO collectively succeeded");
}
/* write data collectively */
MESG("writeAll by Row");
ret = H5Dwrite(dataset1, H5T_NATIVE_INT, mem_dataspace, file_dataspace,
- xfer_plist, data_array1);
+ xfer_plist, data_array1);
VRFY((ret >= 0), "H5Dwrite dataset1 succeeded");
/* setup dimensions again to writeAll with zero rows for process 0 */
if(VERBOSE_MED)
- printf("writeAll by some with zero row\n");
+ HDprintf("writeAll by some with zero row\n");
slab_set(mpi_rank, mpi_size, start, count, stride, block, ZROW);
ret = H5Sselect_hyperslab(file_dataspace, H5S_SELECT_SET, start, stride, count, block);
VRFY((ret >= 0), "H5Sset_hyperslab succeeded");
/* need to make mem_dataspace to match for process 0 */
if(MAINPROCESS){
- ret = H5Sselect_hyperslab(mem_dataspace, H5S_SELECT_SET, start, stride, count, block);
- VRFY((ret >= 0), "H5Sset_hyperslab mem_dataspace succeeded");
+ ret = H5Sselect_hyperslab(mem_dataspace, H5S_SELECT_SET, start, stride, count, block);
+ VRFY((ret >= 0), "H5Sset_hyperslab mem_dataspace succeeded");
}
MESG("writeAll by some with zero row");
ret = H5Dwrite(dataset1, H5T_NATIVE_INT, mem_dataspace, file_dataspace,
- xfer_plist, data_array1);
+ xfer_plist, data_array1);
VRFY((ret >= 0), "H5Dwrite dataset1 by ZROW succeeded");
/* release all temporary handles. */
@@ -720,8 +728,8 @@ dataset_writeAll(void)
dataset_fill(start, block, data_array1);
MESG("data_array initialized");
if(VERBOSE_MED){
- MESG("data_array created");
- dataset_print(start, block, data_array1);
+ MESG("data_array created");
+ dataset_print(start, block, data_array1);
}
/* create a file dataspace independently */
@@ -738,8 +746,8 @@ dataset_writeAll(void)
dataset_fill(start, block, data_array1);
MESG("data_array initialized");
if(VERBOSE_MED){
- MESG("data_array created");
- dataset_print(start, block, data_array1);
+ MESG("data_array created");
+ dataset_print(start, block, data_array1);
}
/* set up the collective transfer properties list */
@@ -748,30 +756,30 @@ dataset_writeAll(void)
ret = H5Pset_dxpl_mpio(xfer_plist, H5FD_MPIO_COLLECTIVE);
VRFY((ret >= 0), "H5Pcreate xfer succeeded");
if(dxfer_coll_type == DXFER_INDEPENDENT_IO) {
- ret = H5Pset_dxpl_mpio_collective_opt(xfer_plist,H5FD_MPIO_INDIVIDUAL_IO);
- VRFY((ret>= 0),"set independent IO collectively succeeded");
+ ret = H5Pset_dxpl_mpio_collective_opt(xfer_plist,H5FD_MPIO_INDIVIDUAL_IO);
+ VRFY((ret>= 0),"set independent IO collectively succeeded");
}
/* write data independently */
ret = H5Dwrite(dataset2, H5T_NATIVE_INT, mem_dataspace, file_dataspace,
- xfer_plist, data_array1);
+ xfer_plist, data_array1);
VRFY((ret >= 0), "H5Dwrite dataset2 succeeded");
/* setup dimensions again to writeAll with zero columns for process 0 */
if(VERBOSE_MED)
- printf("writeAll by some with zero col\n");
+ HDprintf("writeAll by some with zero col\n");
slab_set(mpi_rank, mpi_size, start, count, stride, block, ZCOL);
ret = H5Sselect_hyperslab(file_dataspace, H5S_SELECT_SET, start, stride, count, block);
VRFY((ret >= 0), "H5Sset_hyperslab succeeded");
/* need to make mem_dataspace to match for process 0 */
if(MAINPROCESS){
- ret = H5Sselect_hyperslab(mem_dataspace, H5S_SELECT_SET, start, stride, count, block);
- VRFY((ret >= 0), "H5Sset_hyperslab mem_dataspace succeeded");
+ ret = H5Sselect_hyperslab(mem_dataspace, H5S_SELECT_SET, start, stride, count, block);
+ VRFY((ret >= 0), "H5Sset_hyperslab mem_dataspace succeeded");
}
MESG("writeAll by some with zero col");
ret = H5Dwrite(dataset1, H5T_NATIVE_INT, mem_dataspace, file_dataspace,
- xfer_plist, data_array1);
+ xfer_plist, data_array1);
VRFY((ret >= 0), "H5Dwrite dataset1 by ZCOL succeeded");
/* release all temporary handles. */
@@ -789,8 +797,8 @@ dataset_writeAll(void)
file_dataspace = H5Dget_space (dataset3);
VRFY((file_dataspace >= 0), "H5Dget_space succeeded");
if(MAINPROCESS) {
- ret = H5Sselect_none(file_dataspace);
- VRFY((ret >= 0), "H5Sselect_none file_dataspace succeeded");
+ ret = H5Sselect_none(file_dataspace);
+ VRFY((ret >= 0), "H5Sselect_none file_dataspace succeeded");
} /* end if */
else {
ret = H5Sselect_hyperslab(file_dataspace, H5S_SELECT_SET, start, stride, count, block);
@@ -801,16 +809,16 @@ dataset_writeAll(void)
mem_dataspace = H5Screate_simple (RANK, block, NULL);
VRFY((mem_dataspace >= 0), "");
if(MAINPROCESS) {
- ret = H5Sselect_none(mem_dataspace);
- VRFY((ret >= 0), "H5Sselect_none mem_dataspace succeeded");
+ ret = H5Sselect_none(mem_dataspace);
+ VRFY((ret >= 0), "H5Sselect_none mem_dataspace succeeded");
} /* end if */
/* fill the local slab with some trivial data */
dataset_fill(start, block, data_array1);
MESG("data_array initialized");
if(VERBOSE_MED) {
- MESG("data_array created");
- dataset_print(start, block, data_array1);
+ MESG("data_array created");
+ dataset_print(start, block, data_array1);
} /* end if */
/* set up the collective transfer properties list */
@@ -819,21 +827,21 @@ dataset_writeAll(void)
ret = H5Pset_dxpl_mpio(xfer_plist, H5FD_MPIO_COLLECTIVE);
VRFY((ret >= 0), "H5Pcreate xfer succeeded");
if(dxfer_coll_type == DXFER_INDEPENDENT_IO) {
- ret = H5Pset_dxpl_mpio_collective_opt(xfer_plist,H5FD_MPIO_INDIVIDUAL_IO);
- VRFY((ret>= 0),"set independent IO collectively succeeded");
+ ret = H5Pset_dxpl_mpio_collective_opt(xfer_plist,H5FD_MPIO_INDIVIDUAL_IO);
+ VRFY((ret>= 0),"set independent IO collectively succeeded");
}
/* write data collectively */
MESG("writeAll with none");
ret = H5Dwrite(dataset3, H5T_NATIVE_INT, mem_dataspace, file_dataspace,
- xfer_plist, data_array1);
+ xfer_plist, data_array1);
VRFY((ret >= 0), "H5Dwrite dataset3 succeeded");
/* write data collectively (with datatype conversion) */
MESG("writeAll with none");
ret = H5Dwrite(dataset3, H5T_NATIVE_UCHAR, mem_dataspace, file_dataspace,
- xfer_plist, data_array1);
+ xfer_plist, data_array1);
VRFY((ret >= 0), "H5Dwrite dataset3 succeeded");
/* release all temporary handles. */
@@ -850,8 +858,8 @@ dataset_writeAll(void)
file_dataspace = H5Dget_space (dataset4);
VRFY((file_dataspace >= 0), "H5Dget_space succeeded");
if(MAINPROCESS) {
- ret = H5Sselect_none(file_dataspace);
- VRFY((ret >= 0), "H5Sselect_all file_dataspace succeeded");
+ ret = H5Sselect_none(file_dataspace);
+ VRFY((ret >= 0), "H5Sselect_all file_dataspace succeeded");
} /* end if */
else {
ret = H5Sselect_all(file_dataspace);
@@ -862,8 +870,8 @@ dataset_writeAll(void)
mem_dataspace = H5Screate(H5S_SCALAR);
VRFY((mem_dataspace >= 0), "");
if(MAINPROCESS) {
- ret = H5Sselect_none(mem_dataspace);
- VRFY((ret >= 0), "H5Sselect_all mem_dataspace succeeded");
+ ret = H5Sselect_none(mem_dataspace);
+ VRFY((ret >= 0), "H5Sselect_all mem_dataspace succeeded");
} /* end if */
else {
ret = H5Sselect_all(mem_dataspace);
@@ -874,8 +882,8 @@ dataset_writeAll(void)
dataset_fill(start, block, data_array1);
MESG("data_array initialized");
if(VERBOSE_MED) {
- MESG("data_array created");
- dataset_print(start, block, data_array1);
+ MESG("data_array created");
+ dataset_print(start, block, data_array1);
} /* end if */
/* set up the collective transfer properties list */
@@ -884,20 +892,20 @@ dataset_writeAll(void)
ret = H5Pset_dxpl_mpio(xfer_plist, H5FD_MPIO_COLLECTIVE);
VRFY((ret >= 0), "H5Pcreate xfer succeeded");
if(dxfer_coll_type == DXFER_INDEPENDENT_IO) {
- ret = H5Pset_dxpl_mpio_collective_opt(xfer_plist,H5FD_MPIO_INDIVIDUAL_IO);
- VRFY((ret>= 0),"set independent IO collectively succeeded");
+ ret = H5Pset_dxpl_mpio_collective_opt(xfer_plist,H5FD_MPIO_INDIVIDUAL_IO);
+ VRFY((ret>= 0),"set independent IO collectively succeeded");
}
/* write data collectively */
MESG("writeAll with scalar dataspace");
ret = H5Dwrite(dataset4, H5T_NATIVE_INT, mem_dataspace, file_dataspace,
- xfer_plist, data_array1);
+ xfer_plist, data_array1);
VRFY((ret >= 0), "H5Dwrite dataset4 succeeded");
/* write data collectively (with datatype conversion) */
MESG("writeAll with scalar dataspace");
ret = H5Dwrite(dataset4, H5T_NATIVE_UCHAR, mem_dataspace, file_dataspace,
- xfer_plist, data_array1);
+ xfer_plist, data_array1);
VRFY((ret >= 0), "H5Dwrite dataset4 succeeded");
/* release all temporary handles. */
@@ -907,7 +915,7 @@ dataset_writeAll(void)
if(data_array1) free(data_array1);
- data_array1 = (DATATYPE *)malloc(dim0*dim1*sizeof(DATATYPE));
+ data_array1 = (DATATYPE *)HDmalloc(dim0*dim1*sizeof(DATATYPE));
VRFY((data_array1 != NULL), "data_array1 malloc succeeded");
block[0] = 1;
@@ -922,15 +930,15 @@ dataset_writeAll(void)
dataset_fill(start, block, data_array1);
MESG("data_array initialized");
if(VERBOSE_MED){
- MESG("data_array created");
- dataset_print(start, block, data_array1);
+ MESG("data_array created");
+ dataset_print(start, block, data_array1);
}
/* Dataset5: point selection in File - Hyperslab selection in Memory*/
/* create a file dataspace independently */
point_set (start, count, stride, block, num_points, coords, OUT_OF_ORDER);
file_dataspace = H5Dget_space (dataset5);
- VRFY((file_dataspace >= 0), "H5Dget_space succeeded");
+ VRFY((file_dataspace >= 0), "H5Dget_space succeeded");
ret = H5Sselect_elements(file_dataspace, H5S_SELECT_SET, num_points, coords);
VRFY((ret >= 0), "H5Sselect_elements succeeded");
@@ -1005,7 +1013,7 @@ dataset_writeAll(void)
start[1] = 0;
point_set (start, count, stride, block, num_points, coords, IN_ORDER);
file_dataspace = H5Dget_space (dataset7);
- VRFY((file_dataspace >= 0), "H5Dget_space succeeded");
+ VRFY((file_dataspace >= 0), "H5Dget_space succeeded");
ret = H5Sselect_elements(file_dataspace, H5S_SELECT_SET, num_points, coords);
VRFY((ret >= 0), "H5Sselect_elements succeeded");
@@ -1075,25 +1083,25 @@ void
dataset_readAll(void)
{
hid_t fid; /* HDF5 file ID */
- hid_t acc_tpl; /* File access templates */
- hid_t xfer_plist; /* Dataset transfer properties list */
- hid_t file_dataspace; /* File dataspace ID */
- hid_t mem_dataspace; /* memory dataspace ID */
+ hid_t acc_tpl; /* File access templates */
+ hid_t xfer_plist; /* Dataset transfer properties list */
+ hid_t file_dataspace; /* File dataspace ID */
+ hid_t mem_dataspace; /* memory dataspace ID */
hid_t dataset1, dataset2, dataset5, dataset6, dataset7; /* Dataset ID */
- DATATYPE *data_array1 = NULL; /* data buffer */
- DATATYPE *data_origin1 = NULL; /* expected data buffer */
+ DATATYPE *data_array1 = NULL; /* data buffer */
+ DATATYPE *data_origin1 = NULL; /* expected data buffer */
const char *filename;
- hsize_t start[RANK]; /* for hyperslab setting */
- hsize_t count[RANK], stride[RANK]; /* for hyperslab setting */
- hsize_t block[RANK]; /* for hyperslab setting */
+ hsize_t start[RANK]; /* for hyperslab setting */
+ hsize_t count[RANK], stride[RANK]; /* for hyperslab setting */
+ hsize_t block[RANK]; /* for hyperslab setting */
size_t num_points; /* for point selection */
hsize_t *coords = NULL; /* for point selection */
hsize_t current_dims; /* for point selection */
int i,j,k;
- herr_t ret; /* Generic return value */
+ herr_t ret; /* Generic return value */
int mpi_size, mpi_rank;
MPI_Comm comm = MPI_COMM_WORLD;
@@ -1101,7 +1109,7 @@ dataset_readAll(void)
filename = GetTestParameters();
if(VERBOSE_MED)
- printf("Collective read test on file %s\n", filename);
+ HDprintf("Collective read test on file %s\n", filename);
/* set up MPI parameters */
MPI_Comm_size(MPI_COMM_WORLD,&mpi_size);
@@ -1174,8 +1182,8 @@ dataset_readAll(void)
dataset_fill(start, block, data_origin1);
MESG("data_array initialized");
if(VERBOSE_MED){
- MESG("data_array created");
- dataset_print(start, block, data_origin1);
+ MESG("data_array created");
+ dataset_print(start, block, data_origin1);
}
/* set up the collective transfer properties list */
@@ -1184,14 +1192,14 @@ dataset_readAll(void)
ret = H5Pset_dxpl_mpio(xfer_plist, H5FD_MPIO_COLLECTIVE);
VRFY((ret >= 0), "H5Pcreate xfer succeeded");
if(dxfer_coll_type == DXFER_INDEPENDENT_IO) {
- ret = H5Pset_dxpl_mpio_collective_opt(xfer_plist,H5FD_MPIO_INDIVIDUAL_IO);
- VRFY((ret>= 0),"set independent IO collectively succeeded");
+ ret = H5Pset_dxpl_mpio_collective_opt(xfer_plist,H5FD_MPIO_INDIVIDUAL_IO);
+ VRFY((ret>= 0),"set independent IO collectively succeeded");
}
/* read data collectively */
ret = H5Dread(dataset1, H5T_NATIVE_INT, mem_dataspace, file_dataspace,
- xfer_plist, data_array1);
+ xfer_plist, data_array1);
VRFY((ret >= 0), "H5Dread dataset1 succeeded");
/* verify the read data with original expected data */
@@ -1200,18 +1208,18 @@ dataset_readAll(void)
/* setup dimensions again to readAll with zero columns for process 0 */
if(VERBOSE_MED)
- printf("readAll by some with zero col\n");
+ HDprintf("readAll by some with zero col\n");
slab_set(mpi_rank, mpi_size, start, count, stride, block, ZCOL);
ret = H5Sselect_hyperslab(file_dataspace, H5S_SELECT_SET, start, stride, count, block);
VRFY((ret >= 0), "H5Sset_hyperslab succeeded");
/* need to make mem_dataspace to match for process 0 */
if(MAINPROCESS){
- ret = H5Sselect_hyperslab(mem_dataspace, H5S_SELECT_SET, start, stride, count, block);
- VRFY((ret >= 0), "H5Sset_hyperslab mem_dataspace succeeded");
+ ret = H5Sselect_hyperslab(mem_dataspace, H5S_SELECT_SET, start, stride, count, block);
+ VRFY((ret >= 0), "H5Sset_hyperslab mem_dataspace succeeded");
}
MESG("readAll by some with zero col");
ret = H5Dread(dataset1, H5T_NATIVE_INT, mem_dataspace, file_dataspace,
- xfer_plist, data_array1);
+ xfer_plist, data_array1);
VRFY((ret >= 0), "H5Dread dataset1 by ZCOL succeeded");
/* verify the read data with original expected data */
@@ -1242,8 +1250,8 @@ dataset_readAll(void)
dataset_fill(start, block, data_origin1);
MESG("data_array initialized");
if(VERBOSE_MED){
- MESG("data_array created");
- dataset_print(start, block, data_origin1);
+ MESG("data_array created");
+ dataset_print(start, block, data_origin1);
}
/* set up the collective transfer properties list */
@@ -1252,14 +1260,14 @@ dataset_readAll(void)
ret = H5Pset_dxpl_mpio(xfer_plist, H5FD_MPIO_COLLECTIVE);
VRFY((ret >= 0), "H5Pcreate xfer succeeded");
if(dxfer_coll_type == DXFER_INDEPENDENT_IO) {
- ret = H5Pset_dxpl_mpio_collective_opt(xfer_plist,H5FD_MPIO_INDIVIDUAL_IO);
- VRFY((ret>= 0),"set independent IO collectively succeeded");
+ ret = H5Pset_dxpl_mpio_collective_opt(xfer_plist,H5FD_MPIO_INDIVIDUAL_IO);
+ VRFY((ret>= 0),"set independent IO collectively succeeded");
}
/* read data collectively */
ret = H5Dread(dataset2, H5T_NATIVE_INT, mem_dataspace, file_dataspace,
- xfer_plist, data_array1);
+ xfer_plist, data_array1);
VRFY((ret >= 0), "H5Dread dataset2 succeeded");
/* verify the read data with original expected data */
@@ -1268,18 +1276,18 @@ dataset_readAll(void)
/* setup dimensions again to readAll with zero rows for process 0 */
if(VERBOSE_MED)
- printf("readAll by some with zero row\n");
+ HDprintf("readAll by some with zero row\n");
slab_set(mpi_rank, mpi_size, start, count, stride, block, ZROW);
ret = H5Sselect_hyperslab(file_dataspace, H5S_SELECT_SET, start, stride, count, block);
VRFY((ret >= 0), "H5Sset_hyperslab succeeded");
/* need to make mem_dataspace to match for process 0 */
if(MAINPROCESS){
- ret = H5Sselect_hyperslab(mem_dataspace, H5S_SELECT_SET, start, stride, count, block);
- VRFY((ret >= 0), "H5Sset_hyperslab mem_dataspace succeeded");
+ ret = H5Sselect_hyperslab(mem_dataspace, H5S_SELECT_SET, start, stride, count, block);
+ VRFY((ret >= 0), "H5Sset_hyperslab mem_dataspace succeeded");
}
MESG("readAll by some with zero row");
ret = H5Dread(dataset1, H5T_NATIVE_INT, mem_dataspace, file_dataspace,
- xfer_plist, data_array1);
+ xfer_plist, data_array1);
VRFY((ret >= 0), "H5Dread dataset1 by ZROW succeeded");
/* verify the read data with original expected data */
@@ -1293,9 +1301,9 @@ dataset_readAll(void)
if(data_array1) free(data_array1);
if(data_origin1) free(data_origin1);
- data_array1 = (DATATYPE *)malloc(dim0*dim1*sizeof(DATATYPE));
+ data_array1 = (DATATYPE *)HDmalloc(dim0*dim1*sizeof(DATATYPE));
VRFY((data_array1 != NULL), "data_array1 malloc succeeded");
- data_origin1 = (DATATYPE *)malloc(dim0*dim1*sizeof(DATATYPE));
+ data_origin1 = (DATATYPE *)HDmalloc(dim0*dim1*sizeof(DATATYPE));
VRFY((data_origin1 != NULL), "data_origin1 malloc succeeded");
block[0] = 1;
@@ -1310,8 +1318,8 @@ dataset_readAll(void)
dataset_fill(start, block, data_origin1);
MESG("data_array initialized");
if(VERBOSE_MED){
- MESG("data_array created");
- dataset_print(start, block, data_origin1);
+ MESG("data_array created");
+ dataset_print(start, block, data_origin1);
}
/* Dataset5: point selection in memory - Hyperslab selection in file*/
@@ -1335,8 +1343,8 @@ dataset_readAll(void)
ret = H5Pset_dxpl_mpio(xfer_plist, H5FD_MPIO_COLLECTIVE);
VRFY((ret >= 0), "H5Pcreate xfer succeeded");
if(dxfer_coll_type == DXFER_INDEPENDENT_IO) {
- ret = H5Pset_dxpl_mpio_collective_opt(xfer_plist,H5FD_MPIO_INDIVIDUAL_IO);
- VRFY((ret>= 0),"set independent IO collectively succeeded");
+ ret = H5Pset_dxpl_mpio_collective_opt(xfer_plist,H5FD_MPIO_INDIVIDUAL_IO);
+ VRFY((ret>= 0),"set independent IO collectively succeeded");
}
/* read data collectively */
@@ -1344,7 +1352,7 @@ dataset_readAll(void)
xfer_plist, data_array1);
VRFY((ret >= 0), "H5Dread dataset5 succeeded");
-
+
ret = dataset_vrfy(start, count, stride, block, data_array1, data_origin1);
if(ret) nerrors++;
@@ -1355,7 +1363,7 @@ dataset_readAll(void)
if(data_array1) free(data_array1);
- data_array1 = (DATATYPE *)malloc(dim0*dim1*sizeof(DATATYPE));
+ data_array1 = (DATATYPE *)HDmalloc(dim0*dim1*sizeof(DATATYPE));
VRFY((data_array1 != NULL), "data_array1 malloc succeeded");
/* Dataset6: point selection in File - Point selection in Memory*/
@@ -1400,7 +1408,7 @@ dataset_readAll(void)
H5Pclose(xfer_plist);
if(data_array1) free(data_array1);
- data_array1 = (DATATYPE *)malloc(dim0*dim1*sizeof(DATATYPE));
+ data_array1 = (DATATYPE *)HDmalloc(dim0*dim1*sizeof(DATATYPE));
VRFY((data_array1 != NULL), "data_array1 malloc succeeded");
/* Dataset7: point selection in memory - All selection in file*/
@@ -1488,25 +1496,25 @@ void
extend_writeInd(void)
{
hid_t fid; /* HDF5 file ID */
- hid_t acc_tpl; /* File access templates */
- hid_t sid; /* Dataspace ID */
- hid_t file_dataspace; /* File dataspace ID */
- hid_t mem_dataspace; /* memory dataspace ID */
- hid_t dataset1, dataset2; /* Dataset ID */
+ hid_t acc_tpl; /* File access templates */
+ hid_t sid; /* Dataspace ID */
+ hid_t file_dataspace; /* File dataspace ID */
+ hid_t mem_dataspace; /* memory dataspace ID */
+ hid_t dataset1, dataset2; /* Dataset ID */
const char *filename;
- hsize_t dims[RANK]; /* dataset dim sizes */
+ hsize_t dims[RANK]; /* dataset dim sizes */
hsize_t max_dims[RANK] =
- {H5S_UNLIMITED, H5S_UNLIMITED}; /* dataset maximum dim sizes */
- DATATYPE *data_array1 = NULL; /* data buffer */
- hsize_t chunk_dims[RANK]; /* chunk sizes */
- hid_t dataset_pl; /* dataset create prop. list */
+ {H5S_UNLIMITED, H5S_UNLIMITED}; /* dataset maximum dim sizes */
+ DATATYPE *data_array1 = NULL; /* data buffer */
+ hsize_t chunk_dims[RANK]; /* chunk sizes */
+ hid_t dataset_pl; /* dataset create prop. list */
- hsize_t start[RANK]; /* for hyperslab setting */
- hsize_t count[RANK]; /* for hyperslab setting */
- hsize_t stride[RANK]; /* for hyperslab setting */
- hsize_t block[RANK]; /* for hyperslab setting */
+ hsize_t start[RANK]; /* for hyperslab setting */
+ hsize_t count[RANK]; /* for hyperslab setting */
+ hsize_t stride[RANK]; /* for hyperslab setting */
+ hsize_t block[RANK]; /* for hyperslab setting */
- herr_t ret; /* Generic return value */
+ herr_t ret; /* Generic return value */
int mpi_size, mpi_rank;
MPI_Comm comm = MPI_COMM_WORLD;
@@ -1514,7 +1522,7 @@ extend_writeInd(void)
filename = GetTestParameters();
if(VERBOSE_MED)
- printf("Extend independent write test on file %s\n", filename);
+ HDprintf("Extend independent write test on file %s\n", filename);
/* set up MPI parameters */
MPI_Comm_size(MPI_COMM_WORLD,&mpi_size);
@@ -1567,7 +1575,7 @@ extend_writeInd(void)
/* set up dataset storage chunk sizes and creation property list */
if(VERBOSE_MED)
- printf("chunks[]=%lu,%lu\n", (unsigned long)chunk_dims[0], (unsigned long)chunk_dims[1]);
+ HDprintf("chunks[]=%lu,%lu\n", (unsigned long)chunk_dims[0], (unsigned long)chunk_dims[1]);
dataset_pl = H5Pcreate(H5P_DATASET_CREATE);
VRFY((dataset_pl >= 0), "H5Pcreate succeeded");
ret = H5Pset_chunk(dataset_pl, RANK, chunk_dims);
@@ -1603,8 +1611,8 @@ extend_writeInd(void)
dataset_fill(start, block, data_array1);
MESG("data_array initialized");
if(VERBOSE_MED) {
- MESG("data_array created");
- dataset_print(start, block, data_array1);
+ MESG("data_array created");
+ dataset_print(start, block, data_array1);
}
/* create a memory dataspace independently */
@@ -1625,7 +1633,7 @@ extend_writeInd(void)
/* write data independently */
ret = H5Dwrite(dataset1, H5T_NATIVE_INT, mem_dataspace, file_dataspace,
- H5P_DEFAULT, data_array1);
+ H5P_DEFAULT, data_array1);
VRFY((ret >= 0), "H5Dwrite succeeded");
/* release resource */
@@ -1643,8 +1651,8 @@ extend_writeInd(void)
dataset_fill(start, block, data_array1);
MESG("data_array initialized");
if(VERBOSE_MED){
- MESG("data_array created");
- dataset_print(start, block, data_array1);
+ MESG("data_array created");
+ dataset_print(start, block, data_array1);
}
/* create a memory dataspace independently */
@@ -1664,7 +1672,7 @@ extend_writeInd(void)
/* write data independently. Should fail. */
ret = H5Dwrite(dataset2, H5T_NATIVE_INT, mem_dataspace, file_dataspace,
- H5P_DEFAULT, data_array1);
+ H5P_DEFAULT, data_array1);
VRFY((ret < 0), "H5Dwrite failed as expected");
/* restore auto error reporting */
@@ -1685,7 +1693,7 @@ extend_writeInd(void)
/* write data independently */
ret = H5Dwrite(dataset2, H5T_NATIVE_INT, mem_dataspace, file_dataspace,
- H5P_DEFAULT, data_array1);
+ H5P_DEFAULT, data_array1);
VRFY((ret >= 0), "H5Dwrite succeeded");
/* release resource */
@@ -1719,25 +1727,25 @@ extend_writeInd2(void)
{
const char *filename;
hid_t fid; /* HDF5 file ID */
- hid_t fapl; /* File access templates */
- hid_t fs; /* File dataspace ID */
- hid_t ms; /* Memory dataspace ID */
- hid_t dataset; /* Dataset ID */
- hsize_t orig_size=10; /* Original dataset dim size */
- hsize_t new_size=20; /* Extended dataset dim size */
+ hid_t fapl; /* File access templates */
+ hid_t fs; /* File dataspace ID */
+ hid_t ms; /* Memory dataspace ID */
+ hid_t dataset; /* Dataset ID */
+ hsize_t orig_size=10; /* Original dataset dim size */
+ hsize_t new_size=20; /* Extended dataset dim size */
hsize_t one=1;
- hsize_t max_size = H5S_UNLIMITED; /* dataset maximum dim size */
- hsize_t chunk_size = 16384; /* chunk size */
- hid_t dcpl; /* dataset create prop. list */
+ hsize_t max_size = H5S_UNLIMITED; /* dataset maximum dim size */
+ hsize_t chunk_size = 16384; /* chunk size */
+ hid_t dcpl; /* dataset create prop. list */
int written[10], /* Data to write */
retrieved[10]; /* Data read in */
int mpi_size, mpi_rank; /* MPI settings */
int i; /* Local index variable */
- herr_t ret; /* Generic return value */
+ herr_t ret; /* Generic return value */
filename = GetTestParameters();
if(VERBOSE_MED)
- printf("Extend independent write test #2 on file %s\n", filename);
+ HDprintf("Extend independent write test #2 on file %s\n", filename);
/* set up MPI parameters */
MPI_Comm_size(MPI_COMM_WORLD,&mpi_size);
@@ -1794,10 +1802,10 @@ extend_writeInd2(void)
written[i] = i;
MESG("data array initialized");
if(VERBOSE_MED) {
- MESG("writing at offset zero: ");
+ MESG("writing at offset zero: ");
for(i = 0; i < (int)orig_size; i++)
- printf("%s%d", i?", ":"", written[i]);
- printf("\n");
+ HDprintf("%s%d", i?", ":"", written[i]);
+ HDprintf("\n");
}
ret = H5Dwrite(dataset, H5T_NATIVE_INT, ms, fs, H5P_DEFAULT, written);
VRFY((ret >= 0), "H5Dwrite succeeded");
@@ -1809,15 +1817,15 @@ extend_writeInd2(void)
VRFY((ret >= 0), "H5Dread succeeded");
for (i=0; i<(int)orig_size; i++)
if(written[i]!=retrieved[i]) {
- printf("Line #%d: written!=retrieved: written[%d]=%d, retrieved[%d]=%d\n",__LINE__,
+ HDprintf("Line #%d: written!=retrieved: written[%d]=%d, retrieved[%d]=%d\n",__LINE__,
i,written[i], i,retrieved[i]);
nerrors++;
}
if(VERBOSE_MED){
- MESG("read at offset zero: ");
+ MESG("read at offset zero: ");
for (i=0; i<(int)orig_size; i++)
- printf("%s%d", i?", ":"", retrieved[i]);
- printf("\n");
+ HDprintf("%s%d", i?", ":"", retrieved[i]);
+ HDprintf("\n");
}
/* -------------------------
@@ -1837,10 +1845,10 @@ extend_writeInd2(void)
written[i] = orig_size + i;
MESG("data array re-initialized");
if(VERBOSE_MED) {
- MESG("writing at offset 10: ");
+ MESG("writing at offset 10: ");
for (i=0; i<(int)orig_size; i++)
- printf("%s%d", i?", ":"", written[i]);
- printf("\n");
+ HDprintf("%s%d", i?", ":"", written[i]);
+ HDprintf("\n");
}
ret = H5Sselect_hyperslab(fs, H5S_SELECT_SET, &orig_size, NULL, &one, &orig_size);
VRFY((ret >= 0), "H5Sselect_hyperslab succeeded");
@@ -1854,15 +1862,15 @@ extend_writeInd2(void)
VRFY((ret >= 0), "H5Dread succeeded");
for (i=0; i<(int)orig_size; i++)
if(written[i]!=retrieved[i]) {
- printf("Line #%d: written!=retrieved: written[%d]=%d, retrieved[%d]=%d\n",__LINE__,
+ HDprintf("Line #%d: written!=retrieved: written[%d]=%d, retrieved[%d]=%d\n",__LINE__,
i,written[i], i,retrieved[i]);
nerrors++;
}
if(VERBOSE_MED){
- MESG("read at offset 10: ");
+ MESG("read at offset 10: ");
for (i=0; i<(int)orig_size; i++)
- printf("%s%d", i?", ":"", retrieved[i]);
- printf("\n");
+ HDprintf("%s%d", i?", ":"", retrieved[i]);
+ HDprintf("\n");
}
@@ -1879,22 +1887,22 @@ extend_writeInd2(void)
void
extend_readInd(void)
{
- hid_t fid; /* HDF5 file ID */
- hid_t acc_tpl; /* File access templates */
- hid_t file_dataspace; /* File dataspace ID */
- hid_t mem_dataspace; /* memory dataspace ID */
- hid_t dataset1, dataset2; /* Dataset ID */
- hsize_t dims[RANK]; /* dataset dim sizes */
- DATATYPE *data_array1 = NULL; /* data buffer */
- DATATYPE *data_array2 = NULL; /* data buffer */
- DATATYPE *data_origin1 = NULL; /* expected data buffer */
+ hid_t fid; /* HDF5 file ID */
+ hid_t acc_tpl; /* File access templates */
+ hid_t file_dataspace; /* File dataspace ID */
+ hid_t mem_dataspace; /* memory dataspace ID */
+ hid_t dataset1, dataset2; /* Dataset ID */
+ hsize_t dims[RANK]; /* dataset dim sizes */
+ DATATYPE *data_array1 = NULL; /* data buffer */
+ DATATYPE *data_array2 = NULL; /* data buffer */
+ DATATYPE *data_origin1 = NULL; /* expected data buffer */
const char *filename;
- hsize_t start[RANK]; /* for hyperslab setting */
- hsize_t count[RANK], stride[RANK]; /* for hyperslab setting */
- hsize_t block[RANK]; /* for hyperslab setting */
+ hsize_t start[RANK]; /* for hyperslab setting */
+ hsize_t count[RANK], stride[RANK]; /* for hyperslab setting */
+ hsize_t block[RANK]; /* for hyperslab setting */
- herr_t ret; /* Generic return value */
+ herr_t ret; /* Generic return value */
int mpi_size, mpi_rank;
MPI_Comm comm = MPI_COMM_WORLD;
@@ -1902,7 +1910,7 @@ extend_readInd(void)
filename = GetTestParameters();
if(VERBOSE_MED)
- printf("Extend independent read test on file %s\n", filename);
+ HDprintf("Extend independent read test on file %s\n", filename);
/* set up MPI parameters */
MPI_Comm_size(MPI_COMM_WORLD,&mpi_size);
@@ -1974,13 +1982,13 @@ extend_readInd(void)
/* fill dataset with test data */
dataset_fill(start, block, data_origin1);
if(VERBOSE_MED){
- MESG("data_array created");
- dataset_print(start, block, data_array1);
+ MESG("data_array created");
+ dataset_print(start, block, data_array1);
}
/* read data independently */
ret = H5Dread(dataset1, H5T_NATIVE_INT, mem_dataspace, file_dataspace,
- H5P_DEFAULT, data_array1);
+ H5P_DEFAULT, data_array1);
VRFY((ret >= 0), "H5Dread succeeded");
/* verify the read data with original expected data */
@@ -2009,13 +2017,13 @@ extend_readInd(void)
/* fill dataset with test data */
dataset_fill(start, block, data_origin1);
if(VERBOSE_MED){
- MESG("data_array created");
- dataset_print(start, block, data_array1);
+ MESG("data_array created");
+ dataset_print(start, block, data_array1);
}
/* read data independently */
ret = H5Dread(dataset2, H5T_NATIVE_INT, mem_dataspace, file_dataspace,
- H5P_DEFAULT, data_array1);
+ H5P_DEFAULT, data_array1);
VRFY((ret >= 0), "H5Dread succeeded");
/* verify the read data with original expected data */
@@ -2058,26 +2066,26 @@ void
extend_writeAll(void)
{
hid_t fid; /* HDF5 file ID */
- hid_t acc_tpl; /* File access templates */
- hid_t xfer_plist; /* Dataset transfer properties list */
- hid_t sid; /* Dataspace ID */
- hid_t file_dataspace; /* File dataspace ID */
- hid_t mem_dataspace; /* memory dataspace ID */
- hid_t dataset1, dataset2; /* Dataset ID */
+ hid_t acc_tpl; /* File access templates */
+ hid_t xfer_plist; /* Dataset transfer properties list */
+ hid_t sid; /* Dataspace ID */
+ hid_t file_dataspace; /* File dataspace ID */
+ hid_t mem_dataspace; /* memory dataspace ID */
+ hid_t dataset1, dataset2; /* Dataset ID */
const char *filename;
- hsize_t dims[RANK]; /* dataset dim sizes */
+ hsize_t dims[RANK]; /* dataset dim sizes */
hsize_t max_dims[RANK] =
- {H5S_UNLIMITED, H5S_UNLIMITED}; /* dataset maximum dim sizes */
- DATATYPE *data_array1 = NULL; /* data buffer */
- hsize_t chunk_dims[RANK]; /* chunk sizes */
- hid_t dataset_pl; /* dataset create prop. list */
+ {H5S_UNLIMITED, H5S_UNLIMITED}; /* dataset maximum dim sizes */
+ DATATYPE *data_array1 = NULL; /* data buffer */
+ hsize_t chunk_dims[RANK]; /* chunk sizes */
+ hid_t dataset_pl; /* dataset create prop. list */
- hsize_t start[RANK]; /* for hyperslab setting */
- hsize_t count[RANK]; /* for hyperslab setting */
- hsize_t stride[RANK]; /* for hyperslab setting */
- hsize_t block[RANK]; /* for hyperslab setting */
+ hsize_t start[RANK]; /* for hyperslab setting */
+ hsize_t count[RANK]; /* for hyperslab setting */
+ hsize_t stride[RANK]; /* for hyperslab setting */
+ hsize_t block[RANK]; /* for hyperslab setting */
- herr_t ret; /* Generic return value */
+ herr_t ret; /* Generic return value */
int mpi_size, mpi_rank;
MPI_Comm comm = MPI_COMM_WORLD;
@@ -2085,7 +2093,7 @@ extend_writeAll(void)
filename = GetTestParameters();
if(VERBOSE_MED)
- printf("Extend independent write test on file %s\n", filename);
+ HDprintf("Extend independent write test on file %s\n", filename);
/* set up MPI parameters */
MPI_Comm_size(MPI_COMM_WORLD,&mpi_size);
@@ -2138,7 +2146,7 @@ extend_writeAll(void)
/* set up dataset storage chunk sizes and creation property list */
if(VERBOSE_MED)
- printf("chunks[]=%lu,%lu\n", (unsigned long)chunk_dims[0], (unsigned long)chunk_dims[1]);
+ HDprintf("chunks[]=%lu,%lu\n", (unsigned long)chunk_dims[0], (unsigned long)chunk_dims[1]);
dataset_pl = H5Pcreate(H5P_DATASET_CREATE);
VRFY((dataset_pl >= 0), "H5Pcreate succeeded");
ret = H5Pset_chunk(dataset_pl, RANK, chunk_dims);
@@ -2174,8 +2182,8 @@ extend_writeAll(void)
dataset_fill(start, block, data_array1);
MESG("data_array initialized");
if(VERBOSE_MED) {
- MESG("data_array created");
- dataset_print(start, block, data_array1);
+ MESG("data_array created");
+ dataset_print(start, block, data_array1);
}
/* create a memory dataspace independently */
@@ -2200,14 +2208,14 @@ extend_writeAll(void)
ret = H5Pset_dxpl_mpio(xfer_plist, H5FD_MPIO_COLLECTIVE);
VRFY((ret >= 0), "H5Pset_dxpl_mpio succeeded");
if(dxfer_coll_type == DXFER_INDEPENDENT_IO) {
- ret = H5Pset_dxpl_mpio_collective_opt(xfer_plist,H5FD_MPIO_INDIVIDUAL_IO);
- VRFY((ret>= 0),"set independent IO collectively succeeded");
+ ret = H5Pset_dxpl_mpio_collective_opt(xfer_plist,H5FD_MPIO_INDIVIDUAL_IO);
+ VRFY((ret>= 0),"set independent IO collectively succeeded");
}
/* write data collectively */
ret = H5Dwrite(dataset1, H5T_NATIVE_INT, mem_dataspace, file_dataspace,
- xfer_plist, data_array1);
+ xfer_plist, data_array1);
VRFY((ret >= 0), "H5Dwrite succeeded");
/* release resource */
@@ -2226,8 +2234,8 @@ extend_writeAll(void)
dataset_fill(start, block, data_array1);
MESG("data_array initialized");
if(VERBOSE_MED){
- MESG("data_array created");
- dataset_print(start, block, data_array1);
+ MESG("data_array created");
+ dataset_print(start, block, data_array1);
}
/* create a memory dataspace independently */
@@ -2240,8 +2248,8 @@ extend_writeAll(void)
ret = H5Pset_dxpl_mpio(xfer_plist, H5FD_MPIO_COLLECTIVE);
VRFY((ret >= 0), "H5Pset_dxpl_mpio succeeded");
if(dxfer_coll_type == DXFER_INDEPENDENT_IO) {
- ret = H5Pset_dxpl_mpio_collective_opt(xfer_plist,H5FD_MPIO_INDIVIDUAL_IO);
- VRFY((ret>= 0),"set independent IO collectively succeeded");
+ ret = H5Pset_dxpl_mpio_collective_opt(xfer_plist,H5FD_MPIO_INDIVIDUAL_IO);
+ VRFY((ret>= 0),"set independent IO collectively succeeded");
}
@@ -2258,7 +2266,7 @@ extend_writeAll(void)
/* write data independently. Should fail. */
ret = H5Dwrite(dataset2, H5T_NATIVE_INT, mem_dataspace, file_dataspace,
- xfer_plist, data_array1);
+ xfer_plist, data_array1);
VRFY((ret < 0), "H5Dwrite failed as expected");
/* restore auto error reporting */
@@ -2279,7 +2287,7 @@ extend_writeAll(void)
/* write data independently */
ret = H5Dwrite(dataset2, H5T_NATIVE_INT, mem_dataspace, file_dataspace,
- xfer_plist, data_array1);
+ xfer_plist, data_array1);
VRFY((ret >= 0), "H5Dwrite succeeded");
/* release resource */
@@ -2308,23 +2316,23 @@ extend_writeAll(void)
void
extend_readAll(void)
{
- hid_t fid; /* HDF5 file ID */
- hid_t acc_tpl; /* File access templates */
- hid_t xfer_plist; /* Dataset transfer properties list */
- hid_t file_dataspace; /* File dataspace ID */
- hid_t mem_dataspace; /* memory dataspace ID */
- hid_t dataset1, dataset2; /* Dataset ID */
+ hid_t fid; /* HDF5 file ID */
+ hid_t acc_tpl; /* File access templates */
+ hid_t xfer_plist; /* Dataset transfer properties list */
+ hid_t file_dataspace; /* File dataspace ID */
+ hid_t mem_dataspace; /* memory dataspace ID */
+ hid_t dataset1, dataset2; /* Dataset ID */
const char *filename;
- hsize_t dims[RANK]; /* dataset dim sizes */
- DATATYPE *data_array1 = NULL; /* data buffer */
- DATATYPE *data_array2 = NULL; /* data buffer */
- DATATYPE *data_origin1 = NULL; /* expected data buffer */
+ hsize_t dims[RANK]; /* dataset dim sizes */
+ DATATYPE *data_array1 = NULL; /* data buffer */
+ DATATYPE *data_array2 = NULL; /* data buffer */
+ DATATYPE *data_origin1 = NULL; /* expected data buffer */
- hsize_t start[RANK]; /* for hyperslab setting */
- hsize_t count[RANK], stride[RANK]; /* for hyperslab setting */
- hsize_t block[RANK]; /* for hyperslab setting */
+ hsize_t start[RANK]; /* for hyperslab setting */
+ hsize_t count[RANK], stride[RANK]; /* for hyperslab setting */
+ hsize_t block[RANK]; /* for hyperslab setting */
- herr_t ret; /* Generic return value */
+ herr_t ret; /* Generic return value */
int mpi_size, mpi_rank;
MPI_Comm comm = MPI_COMM_WORLD;
@@ -2332,7 +2340,7 @@ extend_readAll(void)
filename = GetTestParameters();
if(VERBOSE_MED)
- printf("Extend independent read test on file %s\n", filename);
+ HDprintf("Extend independent read test on file %s\n", filename);
/* set up MPI parameters */
MPI_Comm_size(MPI_COMM_WORLD,&mpi_size);
@@ -2404,8 +2412,8 @@ extend_readAll(void)
/* fill dataset with test data */
dataset_fill(start, block, data_origin1);
if(VERBOSE_MED){
- MESG("data_array created");
- dataset_print(start, block, data_array1);
+ MESG("data_array created");
+ dataset_print(start, block, data_array1);
}
/* set up the collective transfer properties list */
@@ -2414,14 +2422,14 @@ extend_readAll(void)
ret = H5Pset_dxpl_mpio(xfer_plist, H5FD_MPIO_COLLECTIVE);
VRFY((ret >= 0), "H5Pset_dxpl_mpio succeeded");
if(dxfer_coll_type == DXFER_INDEPENDENT_IO) {
- ret = H5Pset_dxpl_mpio_collective_opt(xfer_plist,H5FD_MPIO_INDIVIDUAL_IO);
- VRFY((ret>= 0),"set independent IO collectively succeeded");
+ ret = H5Pset_dxpl_mpio_collective_opt(xfer_plist,H5FD_MPIO_INDIVIDUAL_IO);
+ VRFY((ret>= 0),"set independent IO collectively succeeded");
}
/* read data collectively */
ret = H5Dread(dataset1, H5T_NATIVE_INT, mem_dataspace, file_dataspace,
- xfer_plist, data_array1);
+ xfer_plist, data_array1);
VRFY((ret >= 0), "H5Dread succeeded");
/* verify the read data with original expected data */
@@ -2451,8 +2459,8 @@ extend_readAll(void)
/* fill dataset with test data */
dataset_fill(start, block, data_origin1);
if(VERBOSE_MED){
- MESG("data_array created");
- dataset_print(start, block, data_array1);
+ MESG("data_array created");
+ dataset_print(start, block, data_array1);
}
/* set up the collective transfer properties list */
@@ -2461,14 +2469,14 @@ extend_readAll(void)
ret = H5Pset_dxpl_mpio(xfer_plist, H5FD_MPIO_COLLECTIVE);
VRFY((ret >= 0), "H5Pset_dxpl_mpio succeeded");
if(dxfer_coll_type == DXFER_INDEPENDENT_IO) {
- ret = H5Pset_dxpl_mpio_collective_opt(xfer_plist,H5FD_MPIO_INDIVIDUAL_IO);
- VRFY((ret>= 0),"set independent IO collectively succeeded");
+ ret = H5Pset_dxpl_mpio_collective_opt(xfer_plist,H5FD_MPIO_INDIVIDUAL_IO);
+ VRFY((ret>= 0),"set independent IO collectively succeeded");
}
/* read data collectively */
ret = H5Dread(dataset2, H5T_NATIVE_INT, mem_dataspace, file_dataspace,
- xfer_plist, data_array1);
+ xfer_plist, data_array1);
VRFY((ret >= 0), "H5Dread succeeded");
/* verify the read data with original expected data */
@@ -2505,25 +2513,25 @@ void
compress_readAll(void)
{
hid_t fid; /* HDF5 file ID */
- hid_t acc_tpl; /* File access templates */
+ hid_t acc_tpl; /* File access templates */
hid_t dcpl; /* Dataset creation property list */
- hid_t xfer_plist; /* Dataset transfer properties list */
- hid_t dataspace; /* Dataspace ID */
- hid_t dataset; /* Dataset ID */
+ hid_t xfer_plist; /* Dataset transfer properties list */
+ hid_t dataspace; /* Dataspace ID */
+ hid_t dataset; /* Dataset ID */
int rank=1; /* Dataspace rank */
hsize_t dim=dim0; /* Dataspace dimensions */
unsigned u; /* Local index variable */
- DATATYPE *data_read = NULL; /* data buffer */
+ DATATYPE *data_read = NULL; /* data buffer */
DATATYPE *data_orig = NULL; /* expected data buffer */
const char *filename;
MPI_Comm comm = MPI_COMM_WORLD;
MPI_Info info = MPI_INFO_NULL;
int mpi_size, mpi_rank;
- herr_t ret; /* Generic return value */
+ herr_t ret; /* Generic return value */
filename = GetTestParameters();
if(VERBOSE_MED)
- printf("Collective chunked dataset read test on file %s\n", filename);
+ HDprintf("Collective chunked dataset read test on file %s\n", filename);
/* Retrieve MPI parameters */
MPI_Comm_size(comm,&mpi_size);
@@ -2539,101 +2547,101 @@ compress_readAll(void)
for(u=0; u<dim;u++)
data_orig[u]=u;
- /* Process zero creates the file with a compressed, chunked dataset */
- if(mpi_rank==0) {
- hsize_t chunk_dim; /* Chunk dimensions */
-
- /* Create the file */
- fid = H5Fcreate(h5_rmprefix(filename), H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
- VRFY((fid > 0), "H5Fcreate succeeded");
-
- /* Create property list for chunking and compression */
- dcpl = H5Pcreate(H5P_DATASET_CREATE);
- VRFY((dcpl > 0), "H5Pcreate succeeded");
-
- ret = H5Pset_layout(dcpl, H5D_CHUNKED);
- VRFY((ret >= 0), "H5Pset_layout succeeded");
-
- /* Use eight chunks */
- chunk_dim = dim / 8;
- ret = H5Pset_chunk(dcpl, rank, &chunk_dim);
- VRFY((ret >= 0), "H5Pset_chunk succeeded");
+ /* Process zero creates the file with a compressed, chunked dataset */
+ if(mpi_rank==0) {
+ hsize_t chunk_dim; /* Chunk dimensions */
+
+ /* Create the file */
+ fid = H5Fcreate(h5_rmprefix(filename), H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
+ VRFY((fid > 0), "H5Fcreate succeeded");
+
+ /* Create property list for chunking and compression */
+ dcpl = H5Pcreate(H5P_DATASET_CREATE);
+ VRFY((dcpl > 0), "H5Pcreate succeeded");
+
+ ret = H5Pset_layout(dcpl, H5D_CHUNKED);
+ VRFY((ret >= 0), "H5Pset_layout succeeded");
+
+ /* Use eight chunks */
+ chunk_dim = dim / 8;
+ ret = H5Pset_chunk(dcpl, rank, &chunk_dim);
+ VRFY((ret >= 0), "H5Pset_chunk succeeded");
+
+ ret = H5Pset_deflate(dcpl, 9);
+ VRFY((ret >= 0), "H5Pset_deflate succeeded");
+
+ /* Create dataspace */
+ dataspace = H5Screate_simple(rank, &dim, NULL);
+ VRFY((dataspace > 0), "H5Screate_simple succeeded");
+
+ /* Create dataset */
+ dataset = H5Dcreate2(fid, "compressed_data", H5T_NATIVE_INT, dataspace, H5P_DEFAULT, dcpl, H5P_DEFAULT);
+ VRFY((dataset > 0), "H5Dcreate2 succeeded");
+
+ /* Write compressed data */
+ ret = H5Dwrite(dataset, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, data_orig);
+ VRFY((ret >= 0), "H5Dwrite succeeded");
+
+ /* Close objects */
+ ret = H5Pclose(dcpl);
+ VRFY((ret >= 0), "H5Pclose succeeded");
+ ret = H5Sclose(dataspace);
+ VRFY((ret >= 0), "H5Sclose succeeded");
+ ret = H5Dclose(dataset);
+ VRFY((ret >= 0), "H5Dclose succeeded");
+ ret = H5Fclose(fid);
+ VRFY((ret >= 0), "H5Fclose succeeded");
+ }
- ret = H5Pset_deflate(dcpl, 9);
- VRFY((ret >= 0), "H5Pset_deflate succeeded");
+ /* Wait for file to be created */
+ MPI_Barrier(comm);
- /* Create dataspace */
- dataspace = H5Screate_simple(rank, &dim, NULL);
- VRFY((dataspace > 0), "H5Screate_simple succeeded");
+ /* -------------------
+ * OPEN AN HDF5 FILE
+ * -------------------*/
- /* Create dataset */
- dataset = H5Dcreate2(fid, "compressed_data", H5T_NATIVE_INT, dataspace, H5P_DEFAULT, dcpl, H5P_DEFAULT);
- VRFY((dataset > 0), "H5Dcreate2 succeeded");
+ /* setup file access template */
+ acc_tpl = create_faccess_plist(comm, info, facc_type);
+ VRFY((acc_tpl >= 0), "");
- /* Write compressed data */
- ret = H5Dwrite(dataset, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, data_orig);
- VRFY((ret >= 0), "H5Dwrite succeeded");
+ /* open the file collectively */
+ fid=H5Fopen(filename,H5F_ACC_RDWR,acc_tpl);
+ VRFY((fid > 0), "H5Fopen succeeded");
- /* Close objects */
- ret = H5Pclose(dcpl);
+ /* Release file-access template */
+ ret = H5Pclose(acc_tpl);
VRFY((ret >= 0), "H5Pclose succeeded");
- ret = H5Sclose(dataspace);
- VRFY((ret >= 0), "H5Sclose succeeded");
- ret = H5Dclose(dataset);
- VRFY((ret >= 0), "H5Dclose succeeded");
- ret = H5Fclose(fid);
- VRFY((ret >= 0), "H5Fclose succeeded");
- }
-
- /* Wait for file to be created */
- MPI_Barrier(comm);
-
- /* -------------------
- * OPEN AN HDF5 FILE
- * -------------------*/
-
- /* setup file access template */
- acc_tpl = create_faccess_plist(comm, info, facc_type);
- VRFY((acc_tpl >= 0), "");
-
- /* open the file collectively */
- fid=H5Fopen(filename,H5F_ACC_RDWR,acc_tpl);
- VRFY((fid > 0), "H5Fopen succeeded");
-
- /* Release file-access template */
- ret = H5Pclose(acc_tpl);
- VRFY((ret >= 0), "H5Pclose succeeded");
- /* Open dataset with compressed chunks */
- dataset = H5Dopen2(fid, "compressed_data", H5P_DEFAULT);
- VRFY((dataset > 0), "H5Dopen2 succeeded");
+ /* Open dataset with compressed chunks */
+ dataset = H5Dopen2(fid, "compressed_data", H5P_DEFAULT);
+ VRFY((dataset > 0), "H5Dopen2 succeeded");
- /* Try reading & writing data */
- if(dataset>0) {
- /* Create dataset transfer property list */
- xfer_plist = H5Pcreate(H5P_DATASET_XFER);
- VRFY((xfer_plist > 0), "H5Pcreate succeeded");
+ /* Try reading & writing data */
+ if(dataset>0) {
+ /* Create dataset transfer property list */
+ xfer_plist = H5Pcreate(H5P_DATASET_XFER);
+ VRFY((xfer_plist > 0), "H5Pcreate succeeded");
- ret = H5Pset_dxpl_mpio(xfer_plist, H5FD_MPIO_COLLECTIVE);
- VRFY((ret >= 0), "H5Pset_dxpl_mpio succeeded");
- if(dxfer_coll_type == DXFER_INDEPENDENT_IO) {
- ret = H5Pset_dxpl_mpio_collective_opt(xfer_plist,H5FD_MPIO_INDIVIDUAL_IO);
- VRFY((ret>= 0),"set independent IO collectively succeeded");
- }
+ ret = H5Pset_dxpl_mpio(xfer_plist, H5FD_MPIO_COLLECTIVE);
+ VRFY((ret >= 0), "H5Pset_dxpl_mpio succeeded");
+ if(dxfer_coll_type == DXFER_INDEPENDENT_IO) {
+ ret = H5Pset_dxpl_mpio_collective_opt(xfer_plist,H5FD_MPIO_INDIVIDUAL_IO);
+ VRFY((ret>= 0),"set independent IO collectively succeeded");
+ }
- /* Try reading the data */
- ret = H5Dread(dataset, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, xfer_plist, data_read);
- VRFY((ret >= 0), "H5Pset_dxpl_mpio succeeded");
+ /* Try reading the data */
+ ret = H5Dread(dataset, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, xfer_plist, data_read);
+ VRFY((ret >= 0), "H5Dread succeeded");
- /* Verify data read */
- for(u=0; u<dim; u++)
- if(data_orig[u]!=data_read[u]) {
- printf("Line #%d: written!=retrieved: data_orig[%u]=%d, data_read[%u]=%d\n",__LINE__,
- (unsigned)u,data_orig[u],(unsigned)u,data_read[u]);
- nerrors++;
- }
+ /* Verify data read */
+ for(u=0; u<dim; u++)
+ if(data_orig[u]!=data_read[u]) {
+ HDprintf("Line #%d: written!=retrieved: data_orig[%u]=%d, data_read[%u]=%d\n",__LINE__,
+ (unsigned)u,data_orig[u],(unsigned)u,data_read[u]);
+ nerrors++;
+ }
/* Writing to the compressed, chunked dataset in parallel should fail */
H5E_BEGIN_TRY {
@@ -2641,14 +2649,15 @@ compress_readAll(void)
} H5E_END_TRY;
VRFY((ret < 0), "H5Dwrite failed");
- ret = H5Pclose(xfer_plist);
- VRFY((ret >= 0), "H5Pclose succeeded");
- ret = H5Dclose(dataset);
- VRFY((ret >= 0), "H5Dclose succeeded");
- } /* end if */
+ ret = H5Pclose(xfer_plist);
+ VRFY((ret >= 0), "H5Pclose succeeded");
+ ret = H5Dclose(dataset);
+ VRFY((ret >= 0), "H5Dclose succeeded");
+ } /* end if */
- ret = H5Fclose(fid);
- VRFY((ret >= 0), "H5Fclose succeeded");
+ /* Close file */
+ ret = H5Fclose(fid);
+ VRFY((ret >= 0), "H5Fclose succeeded");
/* release data buffers */
if(data_read) HDfree(data_read);
@@ -2672,26 +2681,26 @@ void
none_selection_chunk(void)
{
hid_t fid; /* HDF5 file ID */
- hid_t acc_tpl; /* File access templates */
- hid_t xfer_plist; /* Dataset transfer properties list */
- hid_t sid; /* Dataspace ID */
- hid_t file_dataspace; /* File dataspace ID */
- hid_t mem_dataspace; /* memory dataspace ID */
- hid_t dataset1, dataset2; /* Dataset ID */
+ hid_t acc_tpl; /* File access templates */
+ hid_t xfer_plist; /* Dataset transfer properties list */
+ hid_t sid; /* Dataspace ID */
+ hid_t file_dataspace; /* File dataspace ID */
+ hid_t mem_dataspace; /* memory dataspace ID */
+ hid_t dataset1, dataset2; /* Dataset ID */
const char *filename;
- hsize_t dims[RANK]; /* dataset dim sizes */
- DATATYPE *data_origin = NULL; /* data buffer */
- DATATYPE *data_array = NULL; /* data buffer */
- hsize_t chunk_dims[RANK]; /* chunk sizes */
- hid_t dataset_pl; /* dataset create prop. list */
-
- hsize_t start[RANK]; /* for hyperslab setting */
- hsize_t count[RANK]; /* for hyperslab setting */
- hsize_t stride[RANK]; /* for hyperslab setting */
- hsize_t block[RANK]; /* for hyperslab setting */
- hsize_t mstart[RANK]; /* for data buffer in memory */
-
- herr_t ret; /* Generic return value */
+ hsize_t dims[RANK]; /* dataset dim sizes */
+ DATATYPE *data_origin = NULL; /* data buffer */
+ DATATYPE *data_array = NULL; /* data buffer */
+ hsize_t chunk_dims[RANK]; /* chunk sizes */
+ hid_t dataset_pl; /* dataset create prop. list */
+
+ hsize_t start[RANK]; /* for hyperslab setting */
+ hsize_t count[RANK]; /* for hyperslab setting */
+ hsize_t stride[RANK]; /* for hyperslab setting */
+ hsize_t block[RANK]; /* for hyperslab setting */
+ hsize_t mstart[RANK]; /* for data buffer in memory */
+
+ herr_t ret; /* Generic return value */
int mpi_size, mpi_rank;
MPI_Comm comm = MPI_COMM_WORLD;
@@ -2699,7 +2708,7 @@ none_selection_chunk(void)
filename = GetTestParameters();
if(VERBOSE_MED)
- printf("Extend independent write test on file %s\n", filename);
+ HDprintf("Extend independent write test on file %s\n", filename);
/* set up MPI parameters */
MPI_Comm_size(MPI_COMM_WORLD,&mpi_size);
@@ -2730,7 +2739,7 @@ none_selection_chunk(void)
/* set up dataset storage chunk sizes and creation property list */
if(VERBOSE_MED)
- printf("chunks[]=%lu,%lu\n", (unsigned long)chunk_dims[0], (unsigned long)chunk_dims[1]);
+ HDprintf("chunks[]=%lu,%lu\n", (unsigned long)chunk_dims[0], (unsigned long)chunk_dims[1]);
dataset_pl = H5Pcreate(H5P_DATASET_CREATE);
VRFY((dataset_pl >= 0), "H5Pcreate succeeded");
ret = H5Pset_chunk(dataset_pl, RANK, chunk_dims);
@@ -2774,8 +2783,8 @@ none_selection_chunk(void)
dataset_fill(mstart, block, data_origin);
MESG("data_array initialized");
if(VERBOSE_MED){
- MESG("data_array created");
- dataset_print(mstart, block, data_origin);
+ MESG("data_array created");
+ dataset_print(mstart, block, data_origin);
}
}
@@ -2809,12 +2818,12 @@ none_selection_chunk(void)
/* write data collectively */
ret = H5Dwrite(dataset1, H5T_NATIVE_INT, mem_dataspace, file_dataspace,
- xfer_plist, data_origin);
+ xfer_plist, data_origin);
VRFY((ret >= 0), "H5Dwrite succeeded");
/* read data independently */
ret = H5Dread(dataset1, H5T_NATIVE_INT, mem_dataspace, file_dataspace,
- H5P_DEFAULT, data_array);
+ H5P_DEFAULT, data_array);
VRFY((ret >= 0), "");
/* verify the read data with original expected data */
@@ -2831,12 +2840,12 @@ none_selection_chunk(void)
/* write data collectively */
ret = H5Dwrite(dataset2, H5T_NATIVE_INT, mem_dataspace, file_dataspace,
- xfer_plist, data_origin);
+ xfer_plist, data_origin);
VRFY((ret >= 0), "H5Dwrite succeeded");
/* read data independently */
ret = H5Dread(dataset2, H5T_NATIVE_INT, mem_dataspace, file_dataspace,
- H5P_DEFAULT, data_array);
+ H5P_DEFAULT, data_array);
VRFY((ret >= 0), "");
/* verify the read data with original expected data */
@@ -2868,20 +2877,20 @@ none_selection_chunk(void)
if(data_array) HDfree(data_array);
}
-
+
/* Function: test_actual_io_mode
*
- * Purpose: tests one specific case of collective I/O and checks that the
+ * Purpose: tests one specific case of collective I/O and checks that the
* actual_chunk_opt_mode property and the actual_io_mode
* properties in the DXPL have the correct values.
*
* Input: selection_mode: changes the way processes select data from the space, as well
* as some dxpl flags to get collective I/O to break in different ways.
- *
+ *
* The relevant I/O function and expected response for each mode:
* TEST_ACTUAL_IO_MULTI_CHUNK_IND:
* H5D_mpi_chunk_collective_io, each process reports independent I/O
- *
+ *
* TEST_ACTUAL_IO_MULTI_CHUNK_COL:
* H5D_mpi_chunk_collective_io, each process reports collective I/O
*
@@ -2893,7 +2902,7 @@ none_selection_chunk(void)
* collective, the rest report independent I/O
*
* TEST_ACTUAL_IO_DIRECT_MULTI_CHUNK_IND:
- * Same test TEST_ACTUAL_IO_MULTI_CHUNK_IND.
+ * Same test TEST_ACTUAL_IO_MULTI_CHUNK_IND.
* Set directly go to multi-chunk-io without num threshold calc.
* TEST_ACTUAL_IO_DIRECT_MULTI_CHUNK_COL:
* Same test TEST_ACTUAL_IO_MULTI_CHUNK_COL.
@@ -2918,20 +2927,20 @@ none_selection_chunk(void)
*
* Note: DIRECT_MULTI_CHUNK_MIX and DIRECT_MULTI_CHUNK_MIX_DISAGREE
* is not needed as they are covered by DIRECT_CHUNK_MIX and
- * MULTI_CHUNK_MIX_DISAGREE cases. _DIRECT_ cases are only for testing
+ * MULTI_CHUNK_MIX_DISAGREE cases. _DIRECT_ cases are only for testing
* path way to multi-chunk-io by H5FD_MPIO_CHUNK_MULTI_IO insted of num-threshold.
*
* Modification:
- * - Refctore to remove multi-chunk-without-opimization test and update for
- * testing direct to multi-chunk-io
+ * - Refctore to remove multi-chunk-without-opimization test and update for
+ * testing direct to multi-chunk-io
* Programmer: Jonathan Kim
* Date: 2012-10-10
*
- *
+ *
* Programmer: Jacob Gruber
* Date: 2011-04-06
*/
-static void
+static void
test_actual_io_mode(int selection_mode) {
H5D_mpio_actual_chunk_opt_mode_t actual_chunk_opt_mode_write = -1;
H5D_mpio_actual_chunk_opt_mode_t actual_chunk_opt_mode_read = -1;
@@ -2945,7 +2954,7 @@ test_actual_io_mode(int selection_mode) {
hbool_t multi_chunk_io;
hbool_t is_chunked;
hbool_t is_collective;
- int mpi_size = -1;
+ int mpi_size = -1;
int mpi_rank = -1;
int length;
int * buffer;
@@ -2970,12 +2979,12 @@ test_actual_io_mode(int selection_mode) {
hsize_t block[RANK];
char message[256];
herr_t ret;
-
+
/* Set up some flags to make some future if statements slightly more readable */
direct_multi_chunk_io = (
selection_mode == TEST_ACTUAL_IO_DIRECT_MULTI_CHUNK_IND ||
selection_mode == TEST_ACTUAL_IO_DIRECT_MULTI_CHUNK_COL );
-
+
/* Note: RESET performs the same tests as MULTI_CHUNK_MIX_DISAGREE and then
* tests independent I/O
*/
@@ -2985,11 +2994,11 @@ test_actual_io_mode(int selection_mode) {
selection_mode == TEST_ACTUAL_IO_MULTI_CHUNK_MIX ||
selection_mode == TEST_ACTUAL_IO_MULTI_CHUNK_MIX_DISAGREE ||
selection_mode == TEST_ACTUAL_IO_RESET );
-
+
is_chunked = (
selection_mode != TEST_ACTUAL_IO_CONTIGUOUS &&
selection_mode != TEST_ACTUAL_IO_NO_COLLECTIVE);
-
+
is_collective = selection_mode != TEST_ACTUAL_IO_NO_COLLECTIVE;
/* Set up MPI parameters */
@@ -2997,7 +3006,7 @@ test_actual_io_mode(int selection_mode) {
MPI_Comm_rank(MPI_COMM_WORLD, &mpi_rank);
MPI_Barrier(MPI_COMM_WORLD);
-
+
HDassert(mpi_size >= 1);
mpi_comm = MPI_COMM_WORLD;
@@ -3014,7 +3023,7 @@ test_actual_io_mode(int selection_mode) {
fid = H5Fcreate(filename, H5F_ACC_TRUNC, H5P_DEFAULT, fapl);
VRFY((fid >= 0), "H5Fcreate succeeded");
- /* Create the basic Space */
+ /* Create the basic Space */
dims[0] = dim0;
dims[1] = dim1;
sid = H5Screate_simple (RANK, dims, NULL);
@@ -3042,10 +3051,10 @@ test_actual_io_mode(int selection_mode) {
file_space = H5Dget_space(dataset);
VRFY((file_space >= 0), "H5Dget_space succeeded");
- /* Choose a selection method based on the type of I/O we want to occur,
+ /* Choose a selection method based on the type of I/O we want to occur,
* and also set up some selection-dependeent test info. */
switch(selection_mode) {
-
+
/* Independent I/O with optimization */
case TEST_ACTUAL_IO_MULTI_CHUNK_IND:
case TEST_ACTUAL_IO_DIRECT_MULTI_CHUNK_IND:
@@ -3054,7 +3063,7 @@ test_actual_io_mode(int selection_mode) {
* independent.
*/
slab_set(mpi_rank, mpi_size, start, count, stride, block, BYROW);
-
+
test_name = "Multi Chunk - Independent";
actual_chunk_opt_mode_expected = H5D_MPIO_MULTI_CHUNK;
actual_io_mode_expected = H5D_MPIO_CHUNK_INDEPENDENT;
@@ -3068,7 +3077,7 @@ test_actual_io_mode(int selection_mode) {
* selections to each chunk, the operation is purely collective.
*/
slab_set(mpi_rank, mpi_size, start, count, stride, block, BYCOL);
-
+
test_name = "Multi Chunk - Collective";
actual_chunk_opt_mode_expected = H5D_MPIO_MULTI_CHUNK;
if(mpi_size > 1)
@@ -3076,7 +3085,7 @@ test_actual_io_mode(int selection_mode) {
else
actual_io_mode_expected = H5D_MPIO_CHUNK_INDEPENDENT;
break;
-
+
/* Mixed I/O with optimization */
case TEST_ACTUAL_IO_MULTI_CHUNK_MIX:
/* A chunk will be assigned collective I/O only if it is selected by each
@@ -3087,7 +3096,7 @@ test_actual_io_mode(int selection_mode) {
* assigned independent I/O. Each process will access one chunk collectively
* and at least one chunk independently, reporting mixed I/O.
*/
-
+
if(mpi_rank == 0) {
/* Select the first column */
slab_set(mpi_rank, mpi_size, start, count, stride, block, BYCOL);
@@ -3102,7 +3111,7 @@ test_actual_io_mode(int selection_mode) {
start[0] = 0;
start[1] = mpi_rank*block[1];
}
-
+
test_name = "Multi Chunk - Mixed";
actual_chunk_opt_mode_expected = H5D_MPIO_MULTI_CHUNK;
actual_io_mode_expected = H5D_MPIO_CHUNK_MIXED;
@@ -3112,7 +3121,7 @@ test_actual_io_mode(int selection_mode) {
* performed. To acheive this, we have RESET perform collective I/O (which would change
* the values from the defaults) followed by independent I/O (which should report the
* default values). RESET doesn't need to have a unique selection, so we reuse
- * MULTI_CHUMK_MIX_DISAGREE, which was chosen because it is a complex case that works
+ * MULTI_CHUMK_MIX_DISAGREE, which was chosen because it is a complex case that works
* on all builds. The independent section of RESET can be found at the end of this function.
*/
case TEST_ACTUAL_IO_RESET:
@@ -3121,7 +3130,7 @@ test_actual_io_mode(int selection_mode) {
case TEST_ACTUAL_IO_MULTI_CHUNK_MIX_DISAGREE:
/* A chunk will be assigned collective I/O only if it is selected by each
* process. To get mixed I/O with disagreement, assign process n to the
- * first chunk and the nth chunk. The first chunk, selected by all, is
+ * first chunk and the nth chunk. The first chunk, selected by all, is
* assgigned collective I/O, while each other process gets independent I/O.
* Since the root process with only access the first chunk, it will report
* collective I/O. The subsequent processes will access the first chunk
@@ -3143,13 +3152,13 @@ test_actual_io_mode(int selection_mode) {
start[0] = 0;
start[1] = mpi_rank*block[1];
}
-
+
/* If the testname was not already set by the RESET case */
if (selection_mode == TEST_ACTUAL_IO_RESET)
test_name = "RESET";
else
test_name = "Multi Chunk - Mixed (Disagreement)";
-
+
actual_chunk_opt_mode_expected = H5D_MPIO_MULTI_CHUNK;
if(mpi_size > 1) {
if(mpi_rank == 0)
@@ -3159,14 +3168,14 @@ test_actual_io_mode(int selection_mode) {
}
else
actual_io_mode_expected = H5D_MPIO_CHUNK_INDEPENDENT;
-
- break;
+
+ break;
/* Linked Chunk I/O */
- case TEST_ACTUAL_IO_LINK_CHUNK:
+ case TEST_ACTUAL_IO_LINK_CHUNK:
/* Nothing special; link chunk I/O is forced in the dxpl settings. */
slab_set(mpi_rank, mpi_size, start, count, stride, block, BYROW);
-
+
test_name = "Link Chunk";
actual_chunk_opt_mode_expected = H5D_MPIO_LINK_CHUNK;
actual_io_mode_expected = H5D_MPIO_CHUNK_COLLECTIVE;
@@ -3177,7 +3186,7 @@ test_actual_io_mode(int selection_mode) {
/* A non overlapping, regular selection in a contiguous dataset leads to
* collective I/O */
slab_set(mpi_rank, mpi_size, start, count, stride, block, BYROW);
-
+
test_name = "Contiguous";
actual_chunk_opt_mode_expected = H5D_MPIO_NO_CHUNK_OPTIMIZATION;
actual_io_mode_expected = H5D_MPIO_CONTIGUOUS_COLLECTIVE;
@@ -3185,7 +3194,7 @@ test_actual_io_mode(int selection_mode) {
case TEST_ACTUAL_IO_NO_COLLECTIVE:
slab_set(mpi_rank, mpi_size, start, count, stride, block, BYROW);
-
+
test_name = "Independent";
actual_chunk_opt_mode_expected = H5D_MPIO_NO_CHUNK_OPTIMIZATION;
actual_io_mode_expected = H5D_MPIO_NO_COLLECTIVE;
@@ -3200,13 +3209,13 @@ test_actual_io_mode(int selection_mode) {
ret = H5Sselect_hyperslab(file_space, H5S_SELECT_SET, start, stride, count, block);
VRFY((ret >= 0), "H5Sset_hyperslab succeeded");
-
+
/* Create a memory dataspace mirroring the dataset and select the same hyperslab
- * as in the file space.
+ * as in the file space.
*/
mem_space = H5Screate_simple (RANK, dims, NULL);
VRFY((mem_space >= 0), "mem_space created");
-
+
ret = H5Sselect_hyperslab(mem_space, H5S_SELECT_SET, start, stride, count, block);
VRFY((ret >= 0), "H5Sset_hyperslab succeeded");
@@ -3215,22 +3224,22 @@ test_actual_io_mode(int selection_mode) {
/* Allocate and initialize the buffer */
buffer = (int *)HDmalloc(sizeof(int) * length);
- VRFY((buffer != NULL), "HDmalloc of buffer succeeded");
- for(i = 0; i < length; i++)
+ VRFY((buffer != NULL), "HDmalloc of buffer succeeded");
+ for(i = 0; i < length; i++)
buffer[i] = i;
/* Set up the dxpl for the write */
dxpl_write = H5Pcreate(H5P_DATASET_XFER);
VRFY((dxpl_write >= 0), "H5Pcreate(H5P_DATASET_XFER) succeeded");
-
+
/* Set collective I/O properties in the dxpl. */
if(is_collective) {
/* Request collective I/O */
ret = H5Pset_dxpl_mpio(dxpl_write, H5FD_MPIO_COLLECTIVE);
VRFY((ret >= 0), "H5Pset_dxpl_mpio succeeded");
-
- /* Set the threshold number of processes per chunk to twice mpi_size.
- * This will prevent the threshold from ever being met, thus forcing
+
+ /* Set the threshold number of processes per chunk to twice mpi_size.
+ * This will prevent the threshold from ever being met, thus forcing
* multi chunk io instead of link chunk io.
* This is via deault.
*/
@@ -3268,12 +3277,12 @@ test_actual_io_mode(int selection_mode) {
ret = H5Pget_mpio_actual_chunk_opt_mode(dxpl_write, &actual_chunk_opt_mode_write);
VRFY((ret >= 0), "retriving actual chunk opt mode succeeded" );
-
+
/* Read */
ret = H5Dread(dataset, data_type, mem_space, file_space, dxpl_read, buffer);
if(ret < 0) H5Eprint2(H5E_DEFAULT, stdout);
VRFY((ret >= 0), "H5Dread() dataset multichunk read succeeded");
-
+
/* Retreive Actual io values */
ret = H5Pget_mpio_actual_io_mode(dxpl_read, &actual_io_mode_read);
VRFY((ret >= 0), "retriving actual io mode succeeded" );
@@ -3289,9 +3298,9 @@ test_actual_io_mode(int selection_mode) {
/* Test values */
if(actual_chunk_opt_mode_expected != (unsigned) -1 && actual_io_mode_expected != (unsigned) -1) {
- sprintf(message, "Actual Chunk Opt Mode has the correct value for %s.\n",test_name);
+ HDsprintf(message, "Actual Chunk Opt Mode has the correct value for %s.\n",test_name);
VRFY((actual_chunk_opt_mode_write == actual_chunk_opt_mode_expected), message);
- sprintf(message, "Actual IO Mode has the correct value for %s.\n",test_name);
+ HDsprintf(message, "Actual IO Mode has the correct value for %s.\n",test_name);
VRFY((actual_io_mode_write == actual_io_mode_expected), message);
} else {
HDfprintf(stderr, "%s %d -> (%d,%d)\n", test_name, mpi_rank,
@@ -3323,7 +3332,7 @@ test_actual_io_mode(int selection_mode) {
"actual_chunk_opt_mode has correct value for reset write (independent)");
VRFY(actual_io_mode_write == H5D_MPIO_NO_COLLECTIVE,
"actual_io_mode has correct value for reset write (independent)");
-
+
/* Read */
ret = H5Dread(dataset, data_type, H5S_ALL, H5S_ALL, dxpl_read, buffer);
VRFY((ret >= 0), "H5Dwrite() dataset multichunk write succeeded");
@@ -3333,7 +3342,7 @@ test_actual_io_mode(int selection_mode) {
VRFY( (ret >= 0), "retriving actual io mode succeeded" );
ret = H5Pget_mpio_actual_chunk_opt_mode(dxpl_read, &actual_chunk_opt_mode_read);
VRFY( (ret >= 0), "retriving actual chunk opt mode succeeded" );
-
+
VRFY(actual_chunk_opt_mode_read == H5D_MPIO_NO_CHUNK_OPTIMIZATION,
"actual_chunk_opt_mode has correct value for reset read (independent)");
VRFY(actual_io_mode_read == H5D_MPIO_NO_COLLECTIVE,
@@ -3355,10 +3364,10 @@ test_actual_io_mode(int selection_mode) {
return;
}
-
+
/* Function: actual_io_mode_tests
*
- * Purpose: Tests all possible cases of the actual_io_mode property.
+ * Purpose: Tests all possible cases of the actual_io_mode property.
*
* Programmer: Jacob Gruber
* Date: 2011-04-06
@@ -3369,10 +3378,10 @@ actual_io_mode_tests(void) {
int mpi_rank = -1;
MPI_Comm_size(MPI_COMM_WORLD, &mpi_size);
MPI_Comm_size(MPI_COMM_WORLD, &mpi_rank);
-
+
test_actual_io_mode(TEST_ACTUAL_IO_NO_COLLECTIVE);
-
- /*
+
+ /*
* Test multi-chunk-io via proc_num threshold
*/
test_actual_io_mode(TEST_ACTUAL_IO_MULTI_CHUNK_IND);
@@ -3383,10 +3392,10 @@ actual_io_mode_tests(void) {
test_actual_io_mode(TEST_ACTUAL_IO_MULTI_CHUNK_MIX);
else
HDfprintf(stdout, "Multi Chunk Mixed test requires 3 proceses minimum\n");
-
+
test_actual_io_mode(TEST_ACTUAL_IO_MULTI_CHUNK_MIX_DISAGREE);
- /*
+ /*
* Test multi-chunk-io via setting direct property
*/
test_actual_io_mode(TEST_ACTUAL_IO_DIRECT_MULTI_CHUNK_IND);
@@ -3394,31 +3403,31 @@ actual_io_mode_tests(void) {
test_actual_io_mode(TEST_ACTUAL_IO_LINK_CHUNK);
test_actual_io_mode(TEST_ACTUAL_IO_CONTIGUOUS);
-
+
test_actual_io_mode(TEST_ACTUAL_IO_RESET);
return;
}
-/*
+/*
* Function: test_no_collective_cause_mode
*
- * Purpose:
- * tests cases for broken collective I/O and checks that the
+ * Purpose:
+ * tests cases for broken collective I/O and checks that the
* H5Pget_mpio_no_collective_cause properties in the DXPL have the correct values.
*
- * Input:
+ * Input:
* selection_mode: various mode to cause broken collective I/O
* Note: Originally, each TEST case is supposed to be used alone.
* After some discussion, this is updated to take multiple TEST cases
- * with '|'. However there is no error check for any of combined
+ * with '|'. However there is no error check for any of combined
* test cases, so a tester is responsible to understand and feed
* proper combination of TESTs if needed.
*
- *
+ *
* TEST_COLLECTIVE:
* Test for regular collective I/O without cause of breaking.
* Just to test normal behavior.
- *
+ *
* TEST_SET_INDEPENDENT:
* Test for Independent I/O as the cause of breaking collective I/O.
*
@@ -3430,7 +3439,7 @@ actual_io_mode_tests(void) {
*
* TEST_NOT_SIMPLE_OR_SCALAR_DATASPACES:
* Test for NULL dataspace as the cause of breaking collective I/O.
- *
+ *
* TEST_NOT_CONTIGUOUS_OR_CHUNKED_DATASET_COMPACT:
* Test for Compact layout as the cause of breaking collective I/O.
*
@@ -3439,17 +3448,17 @@ actual_io_mode_tests(void) {
*
* TEST_FILTERS:
* Test for using filter (checksum) as the cause of breaking collective I/O.
- * Note: TEST_FILTERS mode will not work until H5Dcreate and H5write is supported for mpio and filter feature. Use test_no_collective_cause_mode_filter() function instead.
+ * Note: TEST_FILTERS mode will not work until H5Dcreate and H5write is supported for mpio and filter feature. Use test_no_collective_cause_mode_filter() function instead.
+ *
*
- *
* Programmer: Jonathan Kim
* Date: Aug, 2012
*/
#define DSET_NOCOLCAUSE "nocolcause"
#define NELM 2
#define FILE_EXTERNAL "nocolcause_extern.data"
-static void
-test_no_collective_cause_mode(int selection_mode)
+static void
+test_no_collective_cause_mode(int selection_mode)
{
uint32_t no_collective_cause_local_write = 0;
uint32_t no_collective_cause_local_read = 0;
@@ -3463,7 +3472,7 @@ test_no_collective_cause_mode(int selection_mode)
const char * test_name;
hbool_t is_chunked=1;
hbool_t is_independent=0;
- int mpi_size = -1;
+ int mpi_size = -1;
int mpi_rank = -1;
int length;
int * buffer;
@@ -3487,7 +3496,7 @@ test_no_collective_cause_mode(int selection_mode)
H5Z_filter_t filter_info;
#endif /* LATER */
/* set to global value as default */
- int l_facc_type = facc_type;
+ int l_facc_type = facc_type;
char message[256];
/* Set up MPI parameters */
@@ -3549,7 +3558,7 @@ test_no_collective_cause_mode(int selection_mode)
sid = H5Screate_simple (RANK, dims, NULL);
VRFY((sid >= 0), "H5Screate_simple succeeded");
}
-
+
filename = (const char *)GetTestParameters();
HDassert(filename != NULL);
@@ -3574,20 +3583,19 @@ test_no_collective_cause_mode(int selection_mode)
/* Create the dataset */
- dataset = H5Dcreate2(fid, "nocolcause", data_type, sid, H5P_DEFAULT,
- dcpl, H5P_DEFAULT);
+ dataset = H5Dcreate2(fid, "nocolcause", data_type, sid, H5P_DEFAULT, dcpl, H5P_DEFAULT);
VRFY((dataset >= 0), "H5Dcreate2() dataset succeeded");
- /*
- * Set expected causes and some tweaks based on the type of test
+ /*
+ * Set expected causes and some tweaks based on the type of test
*/
if (selection_mode & TEST_DATATYPE_CONVERSION) {
test_name = "Broken Collective I/O - Datatype Conversion";
no_collective_cause_local_expected |= H5D_MPIO_DATATYPE_CONVERSION;
no_collective_cause_global_expected |= H5D_MPIO_DATATYPE_CONVERSION;
/* set different sign to trigger type conversion */
- data_type = H5T_NATIVE_UINT;
+ data_type = H5T_NATIVE_UINT;
}
if (selection_mode & TEST_DATA_TRANSFORMS) {
@@ -3652,14 +3660,14 @@ test_no_collective_cause_mode(int selection_mode)
/* Allocate and initialize the buffer */
buffer = (int *)HDmalloc(sizeof(int) * length);
- VRFY((buffer != NULL), "HDmalloc of buffer succeeded");
- for(i = 0; i < length; i++)
+ VRFY((buffer != NULL), "HDmalloc of buffer succeeded");
+ for(i = 0; i < length; i++)
buffer[i] = i;
/* Set up the dxpl for the write */
dxpl_write = H5Pcreate(H5P_DATASET_XFER);
VRFY((dxpl_write >= 0), "H5Pcreate(H5P_DATASET_XFER) succeeded");
-
+
if(is_independent) {
/* Set Independent I/O */
ret = H5Pset_dxpl_mpio(dxpl_write, H5FD_MPIO_INDEPENDENT);
@@ -3669,17 +3677,17 @@ test_no_collective_cause_mode(int selection_mode)
/* Set Collective I/O */
ret = H5Pset_dxpl_mpio(dxpl_write, H5FD_MPIO_COLLECTIVE);
VRFY((ret >= 0), "H5Pset_dxpl_mpio succeeded");
-
+
}
if (selection_mode & TEST_DATA_TRANSFORMS) {
- ret = H5Pset_data_transform (dxpl_write, "x+1");
+ ret = H5Pset_data_transform (dxpl_write, "x+1");
VRFY((ret >= 0), "H5Pset_data_transform succeeded");
}
/*---------------------
* Test Write access
- *---------------------*/
+ *---------------------*/
/* Write */
ret = H5Dwrite(dataset, data_type, mem_space, file_space, dxpl_write, buffer);
@@ -3694,7 +3702,7 @@ test_no_collective_cause_mode(int selection_mode)
/*---------------------
* Test Read access
- *---------------------*/
+ *---------------------*/
/* Make a copy of the dxpl to test the read operation */
dxpl_read = H5Pcopy(dxpl_write);
@@ -3705,7 +3713,7 @@ test_no_collective_cause_mode(int selection_mode)
if(ret < 0) H5Eprint2(H5E_DEFAULT, stdout);
VRFY((ret >= 0), "H5Dread() dataset multichunk read succeeded");
-
+
/* Get the cause of broken collective I/O */
ret = H5Pget_mpio_no_collective_cause (dxpl_read, &no_collective_cause_local_read, &no_collective_cause_global_read);
VRFY((ret >= 0), "retriving no collective cause succeeded" );
@@ -3715,13 +3723,13 @@ test_no_collective_cause_mode(int selection_mode)
"reading and writing are the same for local cause of Broken Collective I/O");
VRFY((no_collective_cause_global_read == no_collective_cause_global_write),
"reading and writing are the same for global cause of Broken Collective I/O");
-
+
/* Test values */
- memset (message, 0, sizeof (message));
- sprintf(message, "Local cause of Broken Collective I/O has the correct value for %s.\n",test_name);
+ HDmemset (message, 0, sizeof (message));
+ HDsprintf(message, "Local cause of Broken Collective I/O has the correct value for %s.\n",test_name);
VRFY((no_collective_cause_local_write == no_collective_cause_local_expected), message);
- memset (message, 0, sizeof (message));
- sprintf(message, "Global cause of Broken Collective I/O has the correct value for %s.\n",test_name);
+ HDmemset (message, 0, sizeof (message));
+ HDsprintf(message, "Global cause of Broken Collective I/O has the correct value for %s.\n",test_name);
VRFY((no_collective_cause_global_write == no_collective_cause_global_expected), message);
/* Release some resources */
@@ -3753,28 +3761,28 @@ test_no_collective_cause_mode(int selection_mode)
}
-/*
+/*
* Function: test_no_collective_cause_mode_filter
*
- * Purpose:
- * Test specific for using filter as a caus of broken collective I/O and
+ * Purpose:
+ * Test specific for using filter as a caus of broken collective I/O and
* checks that the H5Pget_mpio_no_collective_cause properties in the DXPL
* have the correct values.
*
- * NOTE:
- * This is a temporary function.
+ * NOTE:
+ * This is a temporary function.
* test_no_collective_cause_mode(TEST_FILTERS) will replace this when
* H5Dcreate and H5write support for mpio and filter feature.
*
- * Input:
+ * Input:
* TEST_FILTERS_READ:
* Test for using filter (checksum) as the cause of breaking collective I/O.
- *
+ *
* Programmer: Jonathan Kim
* Date: Aug, 2012
*/
-static void
-test_no_collective_cause_mode_filter(int selection_mode)
+static void
+test_no_collective_cause_mode_filter(int selection_mode)
{
uint32_t no_collective_cause_local_read = 0;
uint32_t no_collective_cause_local_expected = 0;
@@ -3784,7 +3792,7 @@ test_no_collective_cause_mode_filter(int selection_mode)
const char * filename;
const char * test_name;
hbool_t is_chunked=1;
- int mpi_size = -1;
+ int mpi_size = -1;
int mpi_rank = -1;
int length;
int * buffer;
@@ -3814,7 +3822,7 @@ test_no_collective_cause_mode_filter(int selection_mode)
MPI_Comm_rank(MPI_COMM_WORLD, &mpi_rank);
MPI_Barrier(MPI_COMM_WORLD);
-
+
HDassert(mpi_size >= 1);
mpi_comm = MPI_COMM_WORLD;
@@ -3840,12 +3848,12 @@ test_no_collective_cause_mode_filter(int selection_mode)
VRFY(0, "Unexpected mode, only test for TEST_FILTERS_READ.");
}
- /* Create the basic Space */
+ /* Create the basic Space */
dims[0] = dim0;
dims[1] = dim1;
sid = H5Screate_simple (RANK, dims, NULL);
VRFY((sid >= 0), "H5Screate_simple succeeded");
-
+
filename = (const char *)GetTestParameters();
HDassert(filename != NULL);
@@ -3868,8 +3876,7 @@ test_no_collective_cause_mode_filter(int selection_mode)
/* Create the dataset */
- dataset = H5Dcreate2(fid, DSET_NOCOLCAUSE, data_type, sid, H5P_DEFAULT,
- dcpl, H5P_DEFAULT);
+ dataset = H5Dcreate2(fid, DSET_NOCOLCAUSE, data_type, sid, H5P_DEFAULT, dcpl, H5P_DEFAULT);
VRFY((dataset >= 0), "H5Dcreate2() dataset succeeded");
#ifdef LATER /* fletcher32 */
@@ -3892,16 +3899,16 @@ test_no_collective_cause_mode_filter(int selection_mode)
/* Allocate and initialize the buffer */
buffer = (int *)HDmalloc(sizeof(int) * length);
- VRFY((buffer != NULL), "HDmalloc of buffer succeeded");
- for(i = 0; i < length; i++)
+ VRFY((buffer != NULL), "HDmalloc of buffer succeeded");
+ for(i = 0; i < length; i++)
buffer[i] = i;
/* Set up the dxpl for the write */
dxpl = H5Pcreate(H5P_DATASET_XFER);
VRFY((dxpl >= 0), "H5Pcreate(H5P_DATASET_XFER) succeeded");
-
+
if (selection_mode == TEST_FILTERS_READ) {
- /* To test read in collective I/O mode , write in independent mode
+ /* To test read in collective I/O mode , write in independent mode
* because write fails with mpio + filter */
ret = H5Pset_dxpl_mpio(dxpl, H5FD_MPIO_INDEPENDENT);
VRFY((ret >= 0), "H5Pset_dxpl_mpio succeeded");
@@ -3911,7 +3918,7 @@ test_no_collective_cause_mode_filter(int selection_mode)
ret = H5Pset_dxpl_mpio(dxpl, H5FD_MPIO_COLLECTIVE);
VRFY((ret >= 0), "H5Pset_dxpl_mpio succeeded");
}
-
+
/* Write */
ret = H5Dwrite(dataset, data_type, mem_space, file_space, dxpl, buffer);
@@ -3952,17 +3959,17 @@ test_no_collective_cause_mode_filter(int selection_mode)
if(ret < 0) H5Eprint2(H5E_DEFAULT, stdout);
VRFY((ret >= 0), "H5Dread() dataset multichunk read succeeded");
-
+
/* Get the cause of broken collective I/O */
ret = H5Pget_mpio_no_collective_cause (dxpl, &no_collective_cause_local_read, &no_collective_cause_global_read);
VRFY((ret >= 0), "retriving no collective cause succeeded" );
/* Test values */
- memset (message, 0, sizeof (message));
- sprintf(message, "Local cause of Broken Collective I/O has the correct value for %s.\n",test_name);
+ HDmemset (message, 0, sizeof (message));
+ HDsprintf(message, "Local cause of Broken Collective I/O has the correct value for %s.\n",test_name);
VRFY((no_collective_cause_local_read == (uint32_t)no_collective_cause_local_expected), message);
- memset (message, 0, sizeof (message));
- sprintf(message, "Global cause of Broken Collective I/O has the correct value for %s.\n",test_name);
+ HDmemset (message, 0, sizeof (message));
+ HDsprintf(message, "Global cause of Broken Collective I/O has the correct value for %s.\n",test_name);
VRFY((no_collective_cause_global_read == (uint32_t)no_collective_cause_global_expected), message);
/* Release some resources */
@@ -3988,16 +3995,16 @@ test_no_collective_cause_mode_filter(int selection_mode)
/* Function: no_collective_cause_tests
*
- * Purpose: Tests cases for broken collective IO.
+ * Purpose: Tests cases for broken collective IO.
*
* Programmer: Jonathan Kim
* Date: Aug, 2012
*/
-void
-no_collective_cause_tests(void)
+void
+no_collective_cause_tests(void)
{
- /*
- * Test individual cause
+ /*
+ * Test individual cause
*/
test_no_collective_cause_mode (TEST_COLLECTIVE);
test_no_collective_cause_mode (TEST_SET_INDEPENDENT);
@@ -4007,15 +4014,15 @@ no_collective_cause_tests(void)
test_no_collective_cause_mode (TEST_NOT_CONTIGUOUS_OR_CHUNKED_DATASET_COMPACT);
test_no_collective_cause_mode (TEST_NOT_CONTIGUOUS_OR_CHUNKED_DATASET_EXTERNAL);
#ifdef LATER /* fletcher32 */
- /* TODO: use this instead of below TEST_FILTERS_READ when H5Dcreate and
+ /* TODO: use this instead of below TEST_FILTERS_READ when H5Dcreate and
* H5Dwrite is ready for mpio + filter feature.
*/
/* test_no_collective_cause_mode (TEST_FILTERS); */
test_no_collective_cause_mode_filter (TEST_FILTERS_READ);
-#endif /* LATER */
+#endif /* LATER */
- /*
- * Test combined causes
+ /*
+ * Test combined causes
*/
test_no_collective_cause_mode (TEST_NOT_CONTIGUOUS_OR_CHUNKED_DATASET_EXTERNAL | TEST_DATATYPE_CONVERSION);
test_no_collective_cause_mode (TEST_DATATYPE_CONVERSION | TEST_DATA_TRANSFORMS);
@@ -4039,22 +4046,22 @@ void
dataset_atomicity(void)
{
hid_t fid; /* HDF5 file ID */
- hid_t acc_tpl; /* File access templates */
- hid_t sid; /* Dataspace ID */
- hid_t dataset1; /* Dataset IDs */
- hsize_t dims[RANK]; /* dataset dim sizes */
- int *write_buf = NULL; /* data buffer */
- int *read_buf = NULL; /* data buffer */
+ hid_t acc_tpl; /* File access templates */
+ hid_t sid; /* Dataspace ID */
+ hid_t dataset1; /* Dataset IDs */
+ hsize_t dims[RANK]; /* dataset dim sizes */
+ int *write_buf = NULL; /* data buffer */
+ int *read_buf = NULL; /* data buffer */
int buf_size;
hid_t dataset2;
- hid_t file_dataspace; /* File dataspace ID */
- hid_t mem_dataspace; /* Memory dataspace ID */
+ hid_t file_dataspace; /* File dataspace ID */
+ hid_t mem_dataspace; /* Memory dataspace ID */
hsize_t start[RANK];
hsize_t stride[RANK];
hsize_t count[RANK];
hsize_t block[RANK];
const char *filename;
- herr_t ret; /* Generic return value */
+ herr_t ret; /* Generic return value */
int mpi_size, mpi_rank;
int i, j, k;
hbool_t atomicity = FALSE;
@@ -4064,11 +4071,11 @@ dataset_atomicity(void)
dim0 = 64; dim1 = 32;
filename = GetTestParameters();
if (facc_type != FACC_MPIO) {
- printf("Atomicity tests will not work without the MPIO VFD\n");
+ HDprintf("Atomicity tests will not work without the MPIO VFD\n");
return;
}
if(VERBOSE_MED)
- printf("atomic writes to file %s\n", filename);
+ HDprintf("atomic writes to file %s\n", filename);
/* set up MPI parameters */
MPI_Comm_size(MPI_COMM_WORLD,&mpi_size);
@@ -4119,7 +4126,7 @@ dataset_atomicity(void)
H5P_DEFAULT, write_buf);
VRFY((ret >= 0), "H5Dwrite dataset2 succeeded");
}
-
+
ret = H5Dclose(dataset1);
VRFY((ret >= 0), "H5Dclose succeeded");
ret = H5Dclose(dataset2);
@@ -4132,16 +4139,20 @@ dataset_atomicity(void)
MPI_Barrier (comm);
/* make sure setting atomicity fails on a serial file ID */
- /* open the file collectively */
- fid=H5Fopen(filename,H5F_ACC_RDWR,H5P_DEFAULT);
- VRFY((fid >= 0), "H5Fopen succeeed");
+ /* file locking allows only one file open (serial) for writing */
+ if(MAINPROCESS){
+ fid=H5Fopen(filename,H5F_ACC_RDWR,H5P_DEFAULT);
+ VRFY((fid >= 0), "H5Fopen succeeed");
+ }
/* should fail */
ret = H5Fset_mpi_atomicity (fid , TRUE);
VRFY((ret == FAIL), "H5Fset_mpi_atomicity failed");
- ret = H5Fclose(fid);
- VRFY((ret >= 0), "H5Fclose succeeded");
+ if(MAINPROCESS){
+ ret = H5Fclose(fid);
+ VRFY((ret >= 0), "H5Fclose succeeded");
+ }
MPI_Barrier (comm);
@@ -4196,23 +4207,23 @@ dataset_atomicity(void)
if(VERBOSE_MED) {
i=0;j=0;k=0;
for (i=0 ; i<dim0 ; i++) {
- printf ("\n");
+ HDprintf ("\n");
for (j=0 ; j<dim1 ; j++)
- printf ("%d ", read_buf[k++]);
+ HDprintf ("%d ", read_buf[k++]);
}
}
/* The processes that read the dataset must either read all values
as 0 (read happened before process 0 wrote to dataset 1), or 5
(read happened after process 0 wrote to dataset 1) */
- if (0 != mpi_rank) {
+ if (0 != mpi_rank) {
int compare = read_buf[0];
- VRFY((compare == 0 || compare == 5),
+ VRFY((compare == 0 || compare == 5),
"Atomicity Test Failed Process %d: Value read should be 0 or 5\n");
for (i=1; i<buf_size; i++) {
if (read_buf[i] != compare) {
- printf("Atomicity Test Failed Process %d: read_buf[%d] is %d, should be %d\n", mpi_rank, i, read_buf[i], compare);
+ HDprintf("Atomicity Test Failed Process %d: read_buf[%d] is %d, should be %d\n", mpi_rank, i, read_buf[i], compare);
nerrors ++;
}
}
@@ -4294,17 +4305,17 @@ dataset_atomicity(void)
if (mpi_rank == 1) {
i=0;j=0;k=0;
for (i=0 ; i<dim0 ; i++) {
- printf ("\n");
+ HDprintf ("\n");
for (j=0 ; j<dim1 ; j++)
- printf ("%d ", read_buf[k++]);
+ HDprintf ("%d ", read_buf[k++]);
}
- printf ("\n");
+ HDprintf ("\n");
}
}
/* The processes that read the dataset must either read all values
as 5 (read happened after process 0 wrote to dataset 1) */
- if (0 != mpi_rank) {
+ if (0 != mpi_rank) {
int compare;
i=0;j=0;k=0;
@@ -4328,7 +4339,7 @@ dataset_atomicity(void)
continue;
}
else if (compare != read_buf[k]) {
- printf("Atomicity Test Failed Process %d: read_buf[%d] is %d, should be %d\n", mpi_rank, k, read_buf[k], compare);
+ HDprintf("Atomicity Test Failed Process %d: read_buf[%d] is %d, should be %d\n", mpi_rank, k, read_buf[k], compare);
nerrors++;
}
k ++;
@@ -4359,8 +4370,8 @@ dataset_atomicity(void)
* Programmer: Quincey Koziol
* Date: April, 2013
*/
-void
-test_dense_attr(void)
+void
+test_dense_attr(void)
{
int mpi_size, mpi_rank;
hid_t fpid, fid;
@@ -4398,7 +4409,7 @@ test_dense_attr(void)
status = H5Pclose(gpid);
VRFY((status >= 0), "H5Pclose succeeded");
- atFileSpace = H5Screate_simple(1, atDims, NULL);
+ atFileSpace = H5Screate_simple(1, atDims, NULL);
VRFY((atFileSpace > 0), "H5Screate_simple succeeded");
atid = H5Acreate2(gid, "bar", H5T_STD_U64LE, atFileSpace, H5P_DEFAULT, H5P_DEFAULT);
VRFY((atid > 0), "H5Acreate succeeded");
diff --git a/testpar/t_mdset.c b/testpar/t_mdset.c
index 81461f3..c510d45 100644
--- a/testpar/t_mdset.c
+++ b/testpar/t_mdset.c
@@ -12,6 +12,7 @@
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
#include "testphdf5.h"
+#include "H5Dprivate.h"
#define DIM 2
#define SIZE 32
@@ -311,7 +312,6 @@ void compact_dataset(void)
VRFY((ret>= 0),"set independent IO collectively succeeded");
}
-
dataset = H5Dopen2(iof, dname, H5P_DEFAULT);
VRFY((dataset >= 0), "H5Dopen2 succeeded");
@@ -603,7 +603,7 @@ void dataset_fillvalue(void)
hsize_t req_count[4] = {1, 6, 7, 8};
hsize_t dset_size; /* Dataset size */
int *rdata, *wdata; /* Buffers for data to read and write */
- int *twdata, *trdata; /* Temporary pointer into buffer */
+ int *twdata, *trdata; /* Temporary pointer into buffer */
int acc, i, j, k, l; /* Local index variables */
herr_t ret; /* Generic return value */
const char *filename;
@@ -645,27 +645,29 @@ void dataset_fillvalue(void)
/*
* Read dataset before any data is written.
*/
- /* set entire read buffer with the constant 2 */
- HDmemset(rdata,2,(size_t)(dset_size*sizeof(int)));
- /* Independently read the entire dataset back */
- ret = H5Dread(dataset, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, rdata);
- VRFY((ret >= 0), "H5Dread succeeded");
+ /* set entire read buffer with the constant 2 */
+ HDmemset(rdata,2,(size_t)(dset_size*sizeof(int)));
- /* Verify all data read are the fill value 0 */
- trdata = rdata;
- err_num = 0;
- for(i = 0; i < (int)dset_dims[0]; i++)
+ /* Independently read the entire dataset back */
+ ret = H5Dread(dataset, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, rdata);
+ VRFY((ret >= 0), "H5Dread succeeded");
+
+ /* Verify all data read are the fill value 0 */
+ trdata = rdata;
+ err_num = 0;
+ for(i = 0; i < (int)dset_dims[0]; i++)
for(j = 0; j < (int)dset_dims[1]; j++)
- for(k = 0; k < (int)dset_dims[2]; k++)
- for(l = 0; l < (int)dset_dims[3]; l++, twdata++, trdata++)
- if(*trdata != 0)
- if(err_num++ < MAX_ERR_REPORT || VERBOSE_MED)
- printf("Dataset Verify failed at [%d][%d][%d][%d]: expect 0, got %d\n", i, j, k, l, *trdata);
- if(err_num > MAX_ERR_REPORT && !VERBOSE_MED)
+ for(k = 0; k < (int)dset_dims[2]; k++)
+ for(l = 0; l < (int)dset_dims[3]; l++, twdata++, trdata++)
+ if(*trdata != 0)
+ if(err_num++ < MAX_ERR_REPORT || VERBOSE_MED)
+ printf("Dataset Verify failed at [%d][%d][%d][%d]: expect 0, got %d\n", i, j, k, l, *trdata);
+ if(err_num > MAX_ERR_REPORT && !VERBOSE_MED)
printf("[more errors ...]\n");
- if(err_num){
+ if(err_num) {
printf("%d errors found in check_value\n", err_num);
- nerrors++;
+ nerrors++;
+ }
}
/* Barrier to ensure all processes have completed the above test. */
@@ -711,36 +713,38 @@ void dataset_fillvalue(void)
/*
* Read dataset after partial write.
*/
- /* set entire read buffer with the constant 2 */
- HDmemset(rdata,2,(size_t)(dset_size*sizeof(int)));
- /* Independently read the entire dataset back */
- ret = H5Dread(dataset, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, rdata);
- VRFY((ret >= 0), "H5Dread succeeded");
- /* Verify correct data read */
- twdata=wdata;
- trdata=rdata;
- err_num=0;
- for(i=0; i<(int)dset_dims[0]; i++)
+ /* set entire read buffer with the constant 2 */
+ HDmemset(rdata,2,(size_t)(dset_size*sizeof(int)));
+
+ /* Independently read the entire dataset back */
+ ret = H5Dread(dataset, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, rdata);
+ VRFY((ret >= 0), "H5Dread succeeded");
+
+ /* Verify correct data read */
+ twdata=wdata;
+ trdata=rdata;
+ err_num=0;
+ for(i=0; i<(int)dset_dims[0]; i++)
for(j=0; j<(int)dset_dims[1]; j++)
- for(k=0; k<(int)dset_dims[2]; k++)
- for(l=0; l<(int)dset_dims[3]; l++, twdata++, trdata++)
- if(i<mpi_size) {
- if(*twdata != *trdata )
- if(err_num++ < MAX_ERR_REPORT || VERBOSE_MED)
- printf("Dataset Verify failed at [%d][%d][%d][%d]: expect %d, got %d\n", i,j,k,l, *twdata, *trdata);
- } /* end if */
- else {
- if(*trdata != 0)
- if(err_num++ < MAX_ERR_REPORT || VERBOSE_MED)
- printf("Dataset Verify failed at [%d][%d][%d][%d]: expect 0, got %d\n", i,j,k,l, *trdata);
- } /* end else */
- if(err_num > MAX_ERR_REPORT && !VERBOSE_MED)
+ for(k=0; k<(int)dset_dims[2]; k++)
+ for(l=0; l<(int)dset_dims[3]; l++, twdata++, trdata++)
+ if(i<mpi_size) {
+ if(*twdata != *trdata )
+ if(err_num++ < MAX_ERR_REPORT || VERBOSE_MED)
+ printf("Dataset Verify failed at [%d][%d][%d][%d]: expect %d, got %d\n", i,j,k,l, *twdata, *trdata);
+ } /* end if */
+ else {
+ if(*trdata != 0)
+ if(err_num++ < MAX_ERR_REPORT || VERBOSE_MED)
+ printf("Dataset Verify failed at [%d][%d][%d][%d]: expect 0, got %d\n", i,j,k,l, *trdata);
+ } /* end else */
+ if(err_num > MAX_ERR_REPORT && !VERBOSE_MED)
printf("[more errors ...]\n");
- if(err_num){
+ if(err_num){
printf("%d errors found in check_value\n", err_num);
- nerrors++;
- }
+ nerrors++;
+ }
/* Close all file objects */
ret = H5Dclose(dataset);
@@ -856,7 +860,7 @@ void collective_group_write(void)
if(!((m+1) % 10)) {
printf("created %d groups\n", m+1);
MPI_Barrier(MPI_COMM_WORLD);
- }
+ }
#endif /* BARRIER_CHECKS */
}
diff --git a/testpar/t_mpi.c b/testpar/t_mpi.c
index de255cd..94ecbfa 100644
--- a/testpar/t_mpi.c
+++ b/testpar/t_mpi.c
@@ -28,149 +28,143 @@
#include "testpar.h"
/* FILENAME and filenames must have the same number of names */
-const char *FILENAME[2]={
- "MPItest",
- NULL};
-char filenames[2][200];
-int nerrors = 0;
-hid_t fapl; /* file access property list */
+const char *FILENAME[2] = { "MPItest", NULL };
+char filenames[2][200];
+int nerrors = 0;
+hid_t fapl; /* file access property list */
/* protocols */
static int errors_sum(int nerrs);
#define MPIO_TEST_WRITE_SIZE 1024*1024 /* 1 MB */
-static int
-test_mpio_overlap_writes(char *filename)
-{
+static int test_mpio_overlap_writes(char *filename) {
int mpi_size, mpi_rank;
MPI_Comm comm;
MPI_Info info = MPI_INFO_NULL;
int color, mrc;
- MPI_File fh;
+ MPI_File fh;
int i;
int vrfyerrs, nerrs;
- unsigned char buf[4093]; /* use some prime number for size */
+ unsigned char buf[4093]; /* use some prime number for size */
int bufsize = sizeof(buf);
- MPI_Offset stride;
- MPI_Offset mpi_off;
- MPI_Status mpi_stat;
-
+ MPI_Offset stride;
+ MPI_Offset mpi_off;
+ MPI_Status mpi_stat;
if (VERBOSE_MED)
- printf("MPIO independent overlapping writes test on file %s\n",
- filename);
+ printf("MPIO independent overlapping writes test on file %s\n",
+ filename);
nerrs = 0;
/* set up MPI parameters */
- MPI_Comm_size(MPI_COMM_WORLD,&mpi_size);
- MPI_Comm_rank(MPI_COMM_WORLD,&mpi_rank);
+ MPI_Comm_size(MPI_COMM_WORLD, &mpi_size);
+ MPI_Comm_rank(MPI_COMM_WORLD, &mpi_rank);
/* Need at least 2 processes */
if (mpi_size < 2) {
- if (MAINPROCESS)
- printf("Need at least 2 processes to run MPIO test.\n");
- printf(" -SKIP- \n");
- return 0;
+ if (MAINPROCESS)
+ printf("Need at least 2 processes to run MPIO test.\n");
+ printf(" -SKIP- \n");
+ return 0;
}
/* splits processes 0 to n-2 into one comm. and the last one into another */
color = ((mpi_rank < (mpi_size - 1)) ? 0 : 1);
- mrc = MPI_Comm_split (MPI_COMM_WORLD, color, mpi_rank, &comm);
- VRFY((mrc==MPI_SUCCESS), "Comm_split succeeded");
-
- if (color==0){
- /* First n-1 processes (color==0) open a file and write it */
- mrc = MPI_File_open(comm, filename, MPI_MODE_CREATE|MPI_MODE_RDWR,
- info, &fh);
- VRFY((mrc==MPI_SUCCESS), "");
-
- stride = 1;
- mpi_off = mpi_rank*stride;
- while (mpi_off < MPIO_TEST_WRITE_SIZE){
- /* make sure the write does not exceed the TEST_WRITE_SIZE */
- if (mpi_off+stride > MPIO_TEST_WRITE_SIZE)
- stride = MPIO_TEST_WRITE_SIZE - mpi_off;
-
- /* set data to some trivial pattern for easy verification */
- for (i=0; i<stride; i++)
- buf[i] = (unsigned char)(mpi_off+i);
- mrc = MPI_File_write_at(fh, mpi_off, buf, (int)stride, MPI_BYTE,
- &mpi_stat);
- VRFY((mrc==MPI_SUCCESS), "");
-
- /* move the offset pointer to last byte written by all processes */
- mpi_off += (mpi_size - 1 - mpi_rank) * stride;
-
- /* Increase chunk size without exceeding buffer size. */
- /* Then move the starting offset for next write. */
- stride *= 2;
- if (stride > bufsize)
- stride = bufsize;
- mpi_off += mpi_rank*stride;
- }
-
- /* close file and free the communicator */
- mrc = MPI_File_close(&fh);
- VRFY((mrc==MPI_SUCCESS), "MPI_FILE_CLOSE");
- mrc = MPI_Comm_free(&comm);
- VRFY((mrc==MPI_SUCCESS), "MPI_Comm_free");
-
- /* sync with the other waiting processes */
- mrc = MPI_Barrier(MPI_COMM_WORLD);
- VRFY((mrc==MPI_SUCCESS), "Sync after writes");
- }else{
- /* last process waits till writes are done,
- * then opens file to verify data.
- */
- mrc = MPI_Barrier(MPI_COMM_WORLD);
- VRFY((mrc==MPI_SUCCESS), "Sync after writes");
-
- mrc = MPI_File_open(comm, filename, MPI_MODE_RDONLY,
- info, &fh);
- VRFY((mrc==MPI_SUCCESS), "");
-
- stride = bufsize;
- for (mpi_off=0; mpi_off < MPIO_TEST_WRITE_SIZE; mpi_off += bufsize){
- /* make sure it does not read beyond end of data */
- if (mpi_off+stride > MPIO_TEST_WRITE_SIZE)
- stride = MPIO_TEST_WRITE_SIZE - mpi_off;
- mrc = MPI_File_read_at(fh, mpi_off, buf, (int)stride, MPI_BYTE,
- &mpi_stat);
- VRFY((mrc==MPI_SUCCESS), "");
- vrfyerrs=0;
- for (i=0; i<stride; i++){
- unsigned char expected;
- expected = (unsigned char)(mpi_off+i);
- if ((expected != buf[i]) &&
- (vrfyerrs++ < MAX_ERR_REPORT || VERBOSE_MED)) {
- printf("proc %d: found data error at [%ld], expect %u, got %u\n",
- mpi_rank, (long)(mpi_off+i), expected, buf[i]);
- }
- }
- if (vrfyerrs > MAX_ERR_REPORT && !VERBOSE_MED)
- printf("proc %d: [more errors ...]\n", mpi_rank);
-
- nerrs += vrfyerrs;
- }
-
- /* close file and free the communicator */
- mrc = MPI_File_close(&fh);
- VRFY((mrc==MPI_SUCCESS), "MPI_FILE_CLOSE");
- mrc = MPI_Comm_free(&comm);
- VRFY((mrc==MPI_SUCCESS), "MPI_Comm_free");
+ mrc = MPI_Comm_split(MPI_COMM_WORLD, color, mpi_rank, &comm);
+ VRFY((mrc == MPI_SUCCESS), "Comm_split succeeded");
+
+ if (color == 0) {
+ /* First n-1 processes (color==0) open a file and write it */
+ mrc = MPI_File_open(comm, filename, MPI_MODE_CREATE | MPI_MODE_RDWR,
+ info, &fh);
+ VRFY((mrc == MPI_SUCCESS), "");
+
+ stride = 1;
+ mpi_off = mpi_rank * stride;
+ while (mpi_off < MPIO_TEST_WRITE_SIZE) {
+ /* make sure the write does not exceed the TEST_WRITE_SIZE */
+ if (mpi_off + stride > MPIO_TEST_WRITE_SIZE)
+ stride = MPIO_TEST_WRITE_SIZE - mpi_off;
+
+ /* set data to some trivial pattern for easy verification */
+ for (i = 0; i < stride; i++)
+ buf[i] = (unsigned char) (mpi_off + i);
+ mrc = MPI_File_write_at(fh, mpi_off, buf, (int) stride, MPI_BYTE,
+ &mpi_stat);
+ VRFY((mrc == MPI_SUCCESS), "");
+
+ /* move the offset pointer to last byte written by all processes */
+ mpi_off += (mpi_size - 1 - mpi_rank) * stride;
+
+ /* Increase chunk size without exceeding buffer size. */
+ /* Then move the starting offset for next write. */
+ stride *= 2;
+ if (stride > bufsize)
+ stride = bufsize;
+ mpi_off += mpi_rank * stride;
+ }
+
+ /* close file and free the communicator */
+ mrc = MPI_File_close(&fh);
+ VRFY((mrc == MPI_SUCCESS), "MPI_FILE_CLOSE");
+ mrc = MPI_Comm_free(&comm);
+ VRFY((mrc == MPI_SUCCESS), "MPI_Comm_free");
+
+ /* sync with the other waiting processes */
+ mrc = MPI_Barrier(MPI_COMM_WORLD);
+ VRFY((mrc == MPI_SUCCESS), "Sync after writes");
+ } else {
+ /* last process waits till writes are done,
+ * then opens file to verify data.
+ */
+ mrc = MPI_Barrier(MPI_COMM_WORLD);
+ VRFY((mrc == MPI_SUCCESS), "Sync after writes");
+
+ mrc = MPI_File_open(comm, filename, MPI_MODE_RDONLY, info, &fh);
+ VRFY((mrc == MPI_SUCCESS), "");
+
+ stride = bufsize;
+ for (mpi_off = 0; mpi_off < MPIO_TEST_WRITE_SIZE; mpi_off += bufsize) {
+ /* make sure it does not read beyond end of data */
+ if (mpi_off + stride > MPIO_TEST_WRITE_SIZE)
+ stride = MPIO_TEST_WRITE_SIZE - mpi_off;
+ mrc = MPI_File_read_at(fh, mpi_off, buf, (int) stride, MPI_BYTE,
+ &mpi_stat);
+ VRFY((mrc == MPI_SUCCESS), "");
+ vrfyerrs = 0;
+ for (i = 0; i < stride; i++) {
+ unsigned char expected;
+ expected = (unsigned char) (mpi_off + i);
+ if ((expected != buf[i])
+ && (vrfyerrs++ < MAX_ERR_REPORT || VERBOSE_MED)) {
+ printf(
+ "proc %d: found data error at [%ld], expect %u, got %u\n",
+ mpi_rank, (long) (mpi_off + i), expected, buf[i]);
+ }
+ }
+ if (vrfyerrs > MAX_ERR_REPORT && !VERBOSE_MED)
+ printf("proc %d: [more errors ...]\n", mpi_rank);
+
+ nerrs += vrfyerrs;
+ }
+
+ /* close file and free the communicator */
+ mrc = MPI_File_close(&fh);
+ VRFY((mrc == MPI_SUCCESS), "MPI_FILE_CLOSE");
+ mrc = MPI_Comm_free(&comm);
+ VRFY((mrc == MPI_SUCCESS), "MPI_Comm_free");
}
/*
- * one more sync to ensure all processes have done reading
- * before ending this test.
- */
+ * one more sync to ensure all processes have done reading
+ * before ending this test.
+ */
mrc = MPI_Barrier(MPI_COMM_WORLD);
- VRFY((mrc==MPI_SUCCESS), "Sync before leaving test");
+ VRFY((mrc == MPI_SUCCESS), "Sync before leaving test");
return (nerrs);
}
-
#define MB 1048576 /* 1024*1024 == 2**20 */
#define GB 1073741824 /* 1024**3 == 2**30 */
#define TWO_GB_LESS1 2147483647 /* 2**31 - 1 */
@@ -186,30 +180,28 @@ test_mpio_overlap_writes(char *filename)
* Then reads the file back in by reverse order, that is process 0
* reads the data of process n-1 and vice versa.
*/
-static int
-test_mpio_gb_file(char *filename)
-{
+static int test_mpio_gb_file(char *filename) {
int mpi_size, mpi_rank;
MPI_Info info = MPI_INFO_NULL;
int mrc;
- MPI_File fh;
+ MPI_File fh;
int i, j, n;
int vrfyerrs;
- int writerrs; /* write errors */
+ int writerrs; /* write errors */
int nerrs;
- int ntimes; /* how many times */
- char *buf = NULL;
- char expected;
- MPI_Offset size;
- MPI_Offset mpi_off;
- MPI_Offset mpi_off_old;
- MPI_Status mpi_stat;
+ int ntimes; /* how many times */
+ char *buf = NULL;
+ char expected;
+ MPI_Offset size;
+ MPI_Offset mpi_off;
+ MPI_Offset mpi_off_old;
+ MPI_Status mpi_stat;
int is_signed, sizeof_mpi_offset;
nerrs = 0;
/* set up MPI parameters */
- MPI_Comm_size(MPI_COMM_WORLD,&mpi_size);
- MPI_Comm_rank(MPI_COMM_WORLD,&mpi_rank);
+ MPI_Comm_size(MPI_COMM_WORLD, &mpi_size);
+ MPI_Comm_rank(MPI_COMM_WORLD, &mpi_rank);
if (VERBOSE_MED)
printf("MPI_Offset range test\n");
@@ -217,196 +209,207 @@ test_mpio_gb_file(char *filename)
/* figure out the signness and sizeof MPI_Offset */
mpi_off = 0;
is_signed = ((MPI_Offset)(mpi_off - 1)) < 0;
- sizeof_mpi_offset = (int)(sizeof(MPI_Offset));
+ sizeof_mpi_offset = (int) (sizeof(MPI_Offset));
/*
- * Verify the sizeof MPI_Offset and correctness of handling multiple GB
- * sizes.
- */
- if (MAINPROCESS){ /* only process 0 needs to check it*/
- printf("MPI_Offset is %s %d bytes integeral type\n",
- is_signed ? "signed" : "unsigned", (int)sizeof(MPI_Offset));
- if (sizeof_mpi_offset <= 4 && is_signed){
- printf("Skipped 2GB range test "
- "because MPI_Offset cannot support it\n");
- }else {
- /* verify correctness of assigning 2GB sizes */
- mpi_off = 2 * 1024 * (MPI_Offset)MB;
- INFO((mpi_off>0), "2GB OFFSET assignment no overflow");
- INFO((mpi_off-1)==TWO_GB_LESS1, "2GB OFFSET assignment succeed");
-
- /* verify correctness of increasing from below 2 GB to above 2GB */
- mpi_off = TWO_GB_LESS1;
- for (i=0; i < 3; i++){
- mpi_off_old = mpi_off;
- mpi_off = mpi_off + 1;
- /* no overflow */
- INFO((mpi_off>0), "2GB OFFSET increment no overflow");
- /* correct inc. */
- INFO((mpi_off-1)==mpi_off_old, "2GB OFFSET increment succeed");
- }
- }
-
- if (sizeof_mpi_offset <= 4){
- printf("Skipped 4GB range test "
- "because MPI_Offset cannot support it\n");
- }else {
- /* verify correctness of assigning 4GB sizes */
- mpi_off = 4 * 1024 * (MPI_Offset)MB;
- INFO((mpi_off>0), "4GB OFFSET assignment no overflow");
- INFO((mpi_off-1)==FOUR_GB_LESS1, "4GB OFFSET assignment succeed");
-
- /* verify correctness of increasing from below 4 GB to above 4 GB */
- mpi_off = FOUR_GB_LESS1;
- for (i=0; i < 3; i++){
- mpi_off_old = mpi_off;
- mpi_off = mpi_off + 1;
- /* no overflow */
- INFO((mpi_off>0), "4GB OFFSET increment no overflow");
- /* correct inc. */
- INFO((mpi_off-1)==mpi_off_old, "4GB OFFSET increment succeed");
- }
- }
+ * Verify the sizeof MPI_Offset and correctness of handling multiple GB
+ * sizes.
+ */
+ if (MAINPROCESS) { /* only process 0 needs to check it*/
+ printf("MPI_Offset is %s %d bytes integeral type\n",
+ is_signed ? "signed" : "unsigned", (int) sizeof(MPI_Offset));
+ if (sizeof_mpi_offset <= 4 && is_signed) {
+ printf("Skipped 2GB range test "
+ "because MPI_Offset cannot support it\n");
+ } else {
+ /* verify correctness of assigning 2GB sizes */
+ mpi_off = 2 * 1024 * (MPI_Offset) MB;
+ INFO((mpi_off > 0), "2GB OFFSET assignment no overflow");
+ INFO((mpi_off-1)==TWO_GB_LESS1, "2GB OFFSET assignment succeed");
+
+ /* verify correctness of increasing from below 2 GB to above 2GB */
+ mpi_off = TWO_GB_LESS1;
+ for (i = 0; i < 3; i++) {
+ mpi_off_old = mpi_off;
+ mpi_off = mpi_off + 1;
+ /* no overflow */
+ INFO((mpi_off > 0), "2GB OFFSET increment no overflow");
+ /* correct inc. */
+ INFO((mpi_off - 1) == mpi_off_old,
+ "2GB OFFSET increment succeed");
+ }
+ }
+
+ if (sizeof_mpi_offset <= 4) {
+ printf("Skipped 4GB range test "
+ "because MPI_Offset cannot support it\n");
+ } else {
+ /* verify correctness of assigning 4GB sizes */
+ mpi_off = 4 * 1024 * (MPI_Offset) MB;
+ INFO((mpi_off > 0), "4GB OFFSET assignment no overflow");
+ INFO((mpi_off-1)==FOUR_GB_LESS1, "4GB OFFSET assignment succeed");
+
+ /* verify correctness of increasing from below 4 GB to above 4 GB */
+ mpi_off = FOUR_GB_LESS1;
+ for (i = 0; i < 3; i++) {
+ mpi_off_old = mpi_off;
+ mpi_off = mpi_off + 1;
+ /* no overflow */
+ INFO((mpi_off > 0), "4GB OFFSET increment no overflow");
+ /* correct inc. */
+ INFO((mpi_off - 1) == mpi_off_old,
+ "4GB OFFSET increment succeed");
+ }
+ }
}
/*
- * Verify if we can write to a file of multiple GB sizes.
- */
+ * Verify if we can write to a file of multiple GB sizes.
+ */
if (VERBOSE_MED)
- printf("MPIO GB file test %s\n", filename);
-
- if (sizeof_mpi_offset <= 4){
- printf("Skipped GB file range test "
- "because MPI_Offset cannot support it\n");
- }else{
- buf = HDmalloc(MB);
- VRFY((buf!=NULL), "malloc succeed");
-
- /* open a new file. Remove it first in case it exists. */
- /* Must delete because MPI_File_open does not have a Truncate mode. */
- /* Don't care if it has error. */
- MPI_File_delete(filename, MPI_INFO_NULL);
- MPI_Barrier(MPI_COMM_WORLD); /* prevent racing condition */
-
- mrc = MPI_File_open(MPI_COMM_WORLD, filename, MPI_MODE_CREATE|MPI_MODE_RDWR,
- info, &fh);
- VRFY((mrc==MPI_SUCCESS), "MPI_FILE_OPEN");
-
- printf("MPIO GB file write test %s\n", filename);
-
- /* instead of writing every bytes of the file, we will just write
- * some data around the 2 and 4 GB boundaries. That should cover
- * potential integer overflow and filesystem size limits.
- */
- writerrs = 0;
- for (n=2; n <= 4; n+=2){
- ntimes = GB/MB*n/mpi_size + 1;
- for (i=ntimes-2; i <= ntimes; i++){
- mpi_off = (i*mpi_size + mpi_rank)*(MPI_Offset)MB;
- if (VERBOSE_MED)
- HDfprintf(stdout,"proc %d: write to mpi_off=%016llx, %lld\n",
- mpi_rank, mpi_off, mpi_off);
- /* set data to some trivial pattern for easy verification */
- for (j=0; j<MB; j++)
- *(buf+j) = i*mpi_size + mpi_rank;
- if (VERBOSE_MED)
- HDfprintf(stdout,"proc %d: writing %d bytes at offset %lld\n",
- mpi_rank, MB, mpi_off);
- mrc = MPI_File_write_at(fh, mpi_off, buf, MB, MPI_BYTE, &mpi_stat);
- INFO((mrc==MPI_SUCCESS), "GB size file write");
- if (mrc!=MPI_SUCCESS)
- writerrs++;
- }
- }
-
- /* close file and free the communicator */
- mrc = MPI_File_close(&fh);
- VRFY((mrc==MPI_SUCCESS), "MPI_FILE_CLOSE");
-
- mrc = MPI_Barrier(MPI_COMM_WORLD);
- VRFY((mrc==MPI_SUCCESS), "Sync after writes");
-
- /*
- * Verify if we can read the multiple GB file just created.
- */
- /* open it again to verify the data written */
- /* but only if there was no write errors */
- printf("MPIO GB file read test %s\n", filename);
- if (errors_sum(writerrs)>0){
- printf("proc %d: Skip read test due to previous write errors\n",
- mpi_rank);
- goto finish;
- }
- mrc = MPI_File_open(MPI_COMM_WORLD, filename, MPI_MODE_RDONLY, info, &fh);
- VRFY((mrc==MPI_SUCCESS), "");
-
- /* Only read back parts of the file that have been written. */
- for (n=2; n <= 4; n+=2){
- ntimes = GB/MB*n/mpi_size + 1;
- for (i=ntimes-2; i <= ntimes; i++){
- mpi_off = (i*mpi_size + (mpi_size - mpi_rank - 1))*(MPI_Offset)MB;
- if (VERBOSE_MED)
- HDfprintf(stdout,"proc %d: read from mpi_off=%016llx, %lld\n",
- mpi_rank, mpi_off, mpi_off);
- mrc = MPI_File_read_at(fh, mpi_off, buf, MB, MPI_BYTE, &mpi_stat);
- INFO((mrc==MPI_SUCCESS), "GB size file read");
- expected = i*mpi_size + (mpi_size - mpi_rank - 1);
- vrfyerrs=0;
- for (j=0; j<MB; j++){
- if ((*(buf+j) != expected) &&
- (vrfyerrs++ < MAX_ERR_REPORT || VERBOSE_MED)){
- printf("proc %d: found data error at [%ld+%d], expect %d, got %d\n",
- mpi_rank, (long)mpi_off, j, expected, *(buf+j));
- }
- }
- if (vrfyerrs > MAX_ERR_REPORT && !VERBOSE_MED)
- printf("proc %d: [more errors ...]\n", mpi_rank);
-
- nerrs += vrfyerrs;
- }
- }
-
- /* close file and free the communicator */
- mrc = MPI_File_close(&fh);
- VRFY((mrc==MPI_SUCCESS), "MPI_FILE_CLOSE");
-
- /*
- * one more sync to ensure all processes have done reading
- * before ending this test.
- */
- mrc = MPI_Barrier(MPI_COMM_WORLD);
- VRFY((mrc==MPI_SUCCESS), "Sync before leaving test");
+ printf("MPIO GB file test %s\n", filename);
+
+ if (sizeof_mpi_offset <= 4) {
+ printf("Skipped GB file range test "
+ "because MPI_Offset cannot support it\n");
+ } else {
+ buf = (char *) HDmalloc(MB);
+ VRFY((buf != NULL), "malloc succeed");
+
+ /* open a new file. Remove it first in case it exists. */
+ /* Must delete because MPI_File_open does not have a Truncate mode. */
+ /* Don't care if it has error. */
+ MPI_File_delete(filename, MPI_INFO_NULL);
+ MPI_Barrier(MPI_COMM_WORLD); /* prevent racing condition */
+
+ mrc = MPI_File_open(MPI_COMM_WORLD, filename,
+ MPI_MODE_CREATE | MPI_MODE_RDWR, info, &fh);
+ VRFY((mrc == MPI_SUCCESS), "MPI_FILE_OPEN");
+
+ printf("MPIO GB file write test %s\n", filename);
+
+ /* instead of writing every bytes of the file, we will just write
+ * some data around the 2 and 4 GB boundaries. That should cover
+ * potential integer overflow and filesystem size limits.
+ */
+ writerrs = 0;
+ for (n = 2; n <= 4; n += 2) {
+ ntimes = GB / MB * n / mpi_size + 1;
+ for (i = ntimes - 2; i <= ntimes; i++) {
+ mpi_off = (i * mpi_size + mpi_rank) * (MPI_Offset) MB;
+ if (VERBOSE_MED)
+ HDfprintf(stdout,
+ "proc %d: write to mpi_off=%016llx, %lld\n",
+ mpi_rank, mpi_off, mpi_off);
+ /* set data to some trivial pattern for easy verification */
+ for (j = 0; j < MB; j++)
+ *(buf + j) = i * mpi_size + mpi_rank;
+ if (VERBOSE_MED)
+ HDfprintf(stdout,
+ "proc %d: writing %d bytes at offset %lld\n",
+ mpi_rank, MB, mpi_off);
+ mrc = MPI_File_write_at(fh, mpi_off, buf, MB, MPI_BYTE,
+ &mpi_stat);
+ INFO((mrc == MPI_SUCCESS), "GB size file write");
+ if (mrc != MPI_SUCCESS)
+ writerrs++;
+ }
+ }
+
+ /* close file and free the communicator */
+ mrc = MPI_File_close(&fh);
+ VRFY((mrc == MPI_SUCCESS), "MPI_FILE_CLOSE");
+
+ mrc = MPI_Barrier(MPI_COMM_WORLD);
+ VRFY((mrc == MPI_SUCCESS), "Sync after writes");
+
+ /*
+ * Verify if we can read the multiple GB file just created.
+ */
+ /* open it again to verify the data written */
+ /* but only if there was no write errors */
+ printf("MPIO GB file read test %s\n", filename);
+ if (errors_sum(writerrs) > 0) {
+ printf("proc %d: Skip read test due to previous write errors\n",
+ mpi_rank);
+ goto finish;
+ }
+ mrc = MPI_File_open(MPI_COMM_WORLD, filename, MPI_MODE_RDONLY, info,
+ &fh);
+ VRFY((mrc == MPI_SUCCESS), "");
+
+ /* Only read back parts of the file that have been written. */
+ for (n = 2; n <= 4; n += 2) {
+ ntimes = GB / MB * n / mpi_size + 1;
+ for (i = ntimes - 2; i <= ntimes; i++) {
+ mpi_off = (i * mpi_size + (mpi_size - mpi_rank - 1))
+ * (MPI_Offset) MB;
+ if (VERBOSE_MED)
+ HDfprintf(stdout,
+ "proc %d: read from mpi_off=%016llx, %lld\n",
+ mpi_rank, mpi_off, mpi_off);
+ mrc = MPI_File_read_at(fh, mpi_off, buf, MB, MPI_BYTE,
+ &mpi_stat);
+ INFO((mrc == MPI_SUCCESS), "GB size file read");
+ expected = i * mpi_size + (mpi_size - mpi_rank - 1);
+ vrfyerrs = 0;
+ for (j = 0; j < MB; j++) {
+ if ((*(buf + j) != expected)
+ && (vrfyerrs++ < MAX_ERR_REPORT || VERBOSE_MED)) {
+ printf(
+ "proc %d: found data error at [%ld+%d], expect %d, got %d\n",
+ mpi_rank, (long) mpi_off, j, expected,
+ *(buf + j));
+ }
+ }
+ if (vrfyerrs > MAX_ERR_REPORT && !VERBOSE_MED)
+ printf("proc %d: [more errors ...]\n", mpi_rank);
+
+ nerrs += vrfyerrs;
+ }
+ }
+
+ /* close file and free the communicator */
+ mrc = MPI_File_close(&fh);
+ VRFY((mrc == MPI_SUCCESS), "MPI_FILE_CLOSE");
+
+ /*
+ * one more sync to ensure all processes have done reading
+ * before ending this test.
+ */
+ mrc = MPI_Barrier(MPI_COMM_WORLD);
+ VRFY((mrc == MPI_SUCCESS), "Sync before leaving test");
printf("Test if MPI_File_get_size works correctly with %s\n", filename);
- mrc = MPI_File_open(MPI_COMM_WORLD, filename, MPI_MODE_RDONLY, info, &fh);
- VRFY((mrc==MPI_SUCCESS), "");
+ mrc = MPI_File_open(MPI_COMM_WORLD, filename, MPI_MODE_RDONLY, info,
+ &fh);
+ VRFY((mrc == MPI_SUCCESS), "");
- if (MAINPROCESS){ /* only process 0 needs to check it*/
+ if (MAINPROCESS) { /* only process 0 needs to check it*/
mrc = MPI_File_get_size(fh, &size);
- VRFY((mrc==MPI_SUCCESS), "");
- VRFY((size == mpi_off+MB), "MPI_File_get_size doesn't return correct file size.");
+ VRFY((mrc == MPI_SUCCESS), "");
+ VRFY((size == mpi_off+MB),
+ "MPI_File_get_size doesn't return correct file size.");
}
- /* close file and free the communicator */
- mrc = MPI_File_close(&fh);
- VRFY((mrc==MPI_SUCCESS), "MPI_FILE_CLOSE");
+ /* close file and free the communicator */
+ mrc = MPI_File_close(&fh);
+ VRFY((mrc == MPI_SUCCESS), "MPI_FILE_CLOSE");
- /*
- * one more sync to ensure all processes have done reading
- * before ending this test.
- */
- mrc = MPI_Barrier(MPI_COMM_WORLD);
- VRFY((mrc==MPI_SUCCESS), "Sync before leaving test");
+ /*
+ * one more sync to ensure all processes have done reading
+ * before ending this test.
+ */
+ mrc = MPI_Barrier(MPI_COMM_WORLD);
+ VRFY((mrc == MPI_SUCCESS), "Sync before leaving test");
}
-finish:
- if (buf)
- HDfree(buf);
+ finish: if (buf)
+ HDfree(buf);
return (nerrs);
}
-
/*
* MPI-IO Test: One writes, Many reads.
* Verify if only one process writes some data and then all other
@@ -424,191 +427,190 @@ finish:
* Each process writes something, then reads all data back.
*/
-#define DIMSIZE 32 /* Dimension size. */
+#define DIMSIZE 32 /* Dimension size. */
#define PRINTID printf("Proc %d: ", mpi_rank)
#define USENONE 0
-#define USEATOM 1 /* request atomic I/O */
-#define USEFSYNC 2 /* request file_sync */
-
+#define USEATOM 1 /* request atomic I/O */
+#define USEFSYNC 2 /* request file_sync */
-static int
-test_mpio_1wMr(char *filename, int special_request)
-{
+static int test_mpio_1wMr(char *filename, int special_request) {
char hostname[128];
- int mpi_size, mpi_rank;
+ int mpi_size, mpi_rank;
MPI_File fh;
char mpi_err_str[MPI_MAX_ERROR_STRING];
- int mpi_err_strlen;
- int mpi_err;
+ int mpi_err_strlen;
+ int mpi_err;
unsigned char writedata[DIMSIZE], readdata[DIMSIZE];
unsigned char expect_val;
- int i, irank;
- int nerrs = 0; /* number of errors */
- int atomicity;
- MPI_Offset mpi_off;
- MPI_Status mpi_stat;
+ int i, irank;
+ int nerrs = 0; /* number of errors */
+ int atomicity;
+ MPI_Offset mpi_off;
+ MPI_Status mpi_stat;
MPI_Comm_size(MPI_COMM_WORLD, &mpi_size);
MPI_Comm_rank(MPI_COMM_WORLD, &mpi_rank);
- if (MAINPROCESS && VERBOSE_MED){
+ if (MAINPROCESS && VERBOSE_MED) {
printf("Testing one process writes, all processes read.\n");
- printf("Using %d processes accessing file %s\n", mpi_size, filename);
+ printf("Using %d processes accessing file %s\n", mpi_size, filename);
printf(" (Filename can be specified via program argument)\n");
}
/* show the hostname so that we can tell where the processes are running */
- if (VERBOSE_DEF){
- if (gethostname(hostname, 128) < 0){
- PRINTID;
- printf("gethostname failed\n");
- return 1;
- }
- PRINTID;
- printf("hostname=%s\n", hostname);
+ if (VERBOSE_DEF) {
+#ifdef H5_HAVE_GETHOSTNAME
+ if(HDgethostname(hostname, sizeof(hostname)) < 0) {
+ printf("gethostname failed\n");
+ hostname[0] = '\0';
+ }
+#else
+ printf("gethostname unavailable\n");
+ hostname[0] = '\0';
+#endif
+ PRINTID;
+ printf("hostname=%s\n", hostname);
}
/* Delete any old file in order to start anew. */
/* Must delete because MPI_File_open does not have a Truncate mode. */
/* Don't care if it has error. */
MPI_File_delete(filename, MPI_INFO_NULL);
- MPI_Barrier(MPI_COMM_WORLD); /* prevent racing condition */
+ MPI_Barrier(MPI_COMM_WORLD); /* prevent racing condition */
if ((mpi_err = MPI_File_open(MPI_COMM_WORLD, filename,
- MPI_MODE_RDWR | MPI_MODE_CREATE ,
- MPI_INFO_NULL, &fh))
- != MPI_SUCCESS){
- MPI_Error_string(mpi_err, mpi_err_str, &mpi_err_strlen);
- PRINTID;
- printf("MPI_File_open failed (%s)\n", mpi_err_str);
- return 1;
+ MPI_MODE_RDWR | MPI_MODE_CREATE, MPI_INFO_NULL, &fh))
+ != MPI_SUCCESS) {
+ MPI_Error_string(mpi_err, mpi_err_str, &mpi_err_strlen);
+ PRINTID;
+ printf("MPI_File_open failed (%s)\n", mpi_err_str);
+ return 1;
}
-if (special_request & USEATOM){
- /* ==================================================
- * Set atomcity to true (1). A POSIX compliant filesystem
- * should not need this.
- * ==================================================*/
- if ((mpi_err = MPI_File_get_atomicity(fh, &atomicity)) != MPI_SUCCESS){
- MPI_Error_string(mpi_err, mpi_err_str, &mpi_err_strlen);
- PRINTID;
- printf("MPI_File_get_atomicity failed (%s)\n", mpi_err_str);
- }
- if (VERBOSE_HI)
- printf("Initial atomicity = %d\n", atomicity);
- if ((mpi_err = MPI_File_set_atomicity(fh, 1)) != MPI_SUCCESS){
- MPI_Error_string(mpi_err, mpi_err_str, &mpi_err_strlen);
- PRINTID;
- printf("MPI_File_set_atomicity failed (%s)\n", mpi_err_str);
- }
- if ((mpi_err = MPI_File_get_atomicity(fh, &atomicity)) != MPI_SUCCESS){
- MPI_Error_string(mpi_err, mpi_err_str, &mpi_err_strlen);
- PRINTID;
- printf("MPI_File_get_atomicity failed (%s)\n", mpi_err_str);
+ if (special_request & USEATOM) {
+ /* ==================================================
+ * Set atomcity to true (1). A POSIX compliant filesystem
+ * should not need this.
+ * ==================================================*/
+ if ((mpi_err = MPI_File_get_atomicity(fh, &atomicity)) != MPI_SUCCESS) {
+ MPI_Error_string(mpi_err, mpi_err_str, &mpi_err_strlen);
+ PRINTID;
+ printf("MPI_File_get_atomicity failed (%s)\n", mpi_err_str);
+ }
+ if (VERBOSE_HI)
+ printf("Initial atomicity = %d\n", atomicity);
+ if ((mpi_err = MPI_File_set_atomicity(fh, 1)) != MPI_SUCCESS) {
+ MPI_Error_string(mpi_err, mpi_err_str, &mpi_err_strlen);
+ PRINTID;
+ printf("MPI_File_set_atomicity failed (%s)\n", mpi_err_str);
+ }
+ if ((mpi_err = MPI_File_get_atomicity(fh, &atomicity)) != MPI_SUCCESS) {
+ MPI_Error_string(mpi_err, mpi_err_str, &mpi_err_strlen);
+ PRINTID;
+ printf("MPI_File_get_atomicity failed (%s)\n", mpi_err_str);
+ }
+ if (VERBOSE_HI)
+ printf("After set_atomicity atomicity = %d\n", atomicity);
}
- if (VERBOSE_HI)
- printf("After set_atomicity atomicity = %d\n", atomicity);
-}
/* This barrier is not necessary but do it anyway. */
MPI_Barrier(MPI_COMM_WORLD);
- if (VERBOSE_HI){
- PRINTID;
- printf("between MPI_Barrier and MPI_File_write_at\n");
+ if (VERBOSE_HI) {
+ PRINTID;
+ printf("between MPI_Barrier and MPI_File_write_at\n");
}
/* ==================================================
- * Each process calculates what to write but
- * only process irank(0) writes.
- * ==================================================*/
- irank=0;
- for (i=0; i < DIMSIZE; i++)
- writedata[i] = irank*DIMSIZE + i;
- mpi_off = irank*DIMSIZE;
+ * Each process calculates what to write but
+ * only process irank(0) writes.
+ * ==================================================*/
+ irank = 0;
+ for (i = 0; i < DIMSIZE; i++)
+ writedata[i] = irank * DIMSIZE + i;
+ mpi_off = irank * DIMSIZE;
/* Only one process writes */
- if (mpi_rank==irank){
- if (VERBOSE_HI){
- PRINTID; printf("wrote %d bytes at %ld\n", DIMSIZE, (long)mpi_off);
- }
- if ((mpi_err = MPI_File_write_at(fh, mpi_off, writedata, DIMSIZE,
- MPI_BYTE, &mpi_stat))
- != MPI_SUCCESS){
- MPI_Error_string(mpi_err, mpi_err_str, &mpi_err_strlen);
- PRINTID;
- printf("MPI_File_write_at offset(%ld), bytes (%d), failed (%s)\n",
- (long) mpi_off, DIMSIZE, mpi_err_str);
- return 1;
- };
+ if (mpi_rank == irank) {
+ if (VERBOSE_HI) {
+ PRINTID;
+ printf("wrote %d bytes at %ld\n", DIMSIZE, (long) mpi_off);
+ }
+ if ((mpi_err = MPI_File_write_at(fh, mpi_off, writedata, DIMSIZE,
+ MPI_BYTE, &mpi_stat)) != MPI_SUCCESS) {
+ MPI_Error_string(mpi_err, mpi_err_str, &mpi_err_strlen);
+ PRINTID;
+ printf("MPI_File_write_at offset(%ld), bytes (%d), failed (%s)\n",
+ (long) mpi_off, DIMSIZE, mpi_err_str);
+ return 1;
+ };
};
/* Bcast the return code and */
/* make sure all writing are done before reading. */
MPI_Bcast(&mpi_err, 1, MPI_INT, irank, MPI_COMM_WORLD);
- if (VERBOSE_HI){
- PRINTID;
- printf("MPI_Bcast: mpi_err = %d\n", mpi_err);
+ if (VERBOSE_HI) {
+ PRINTID;
+ printf("MPI_Bcast: mpi_err = %d\n", mpi_err);
}
-if (special_request & USEFSYNC){
- /* ==================================================
- * Do a file sync. A POSIX compliant filesystem
- * should not need this.
- * ==================================================*/
- if (VERBOSE_HI)
- printf("Apply MPI_File_sync\n");
- /* call file_sync to force the write out */
- if ((mpi_err = MPI_File_sync(fh)) != MPI_SUCCESS){
- MPI_Error_string(mpi_err, mpi_err_str, &mpi_err_strlen);
- PRINTID;
- printf("MPI_File_sync failed (%s)\n", mpi_err_str);
- }
- MPI_Barrier(MPI_COMM_WORLD);
- /* call file_sync to force the write out */
- if ((mpi_err = MPI_File_sync(fh)) != MPI_SUCCESS){
- MPI_Error_string(mpi_err, mpi_err_str, &mpi_err_strlen);
- PRINTID;
- printf("MPI_File_sync failed (%s)\n", mpi_err_str);
+ if (special_request & USEFSYNC) {
+ /* ==================================================
+ * Do a file sync. A POSIX compliant filesystem
+ * should not need this.
+ * ==================================================*/
+ if (VERBOSE_HI)
+ printf("Apply MPI_File_sync\n");
+ /* call file_sync to force the write out */
+ if ((mpi_err = MPI_File_sync(fh)) != MPI_SUCCESS) {
+ MPI_Error_string(mpi_err, mpi_err_str, &mpi_err_strlen);
+ PRINTID;
+ printf("MPI_File_sync failed (%s)\n", mpi_err_str);
+ }
+ MPI_Barrier(MPI_COMM_WORLD);
+ /* call file_sync to force the write out */
+ if ((mpi_err = MPI_File_sync(fh)) != MPI_SUCCESS) {
+ MPI_Error_string(mpi_err, mpi_err_str, &mpi_err_strlen);
+ PRINTID;
+ printf("MPI_File_sync failed (%s)\n", mpi_err_str);
+ }
}
-}
/* This barrier is not necessary because the Bcase or File_sync above */
/* should take care of it. Do it anyway. */
MPI_Barrier(MPI_COMM_WORLD);
- if (VERBOSE_HI){
- PRINTID;
- printf("after MPI_Barrier\n");
+ if (VERBOSE_HI) {
+ PRINTID;
+ printf("after MPI_Barrier\n");
}
/* ==================================================
- * Each process reads what process 0 wrote and verify.
- * ==================================================*/
- irank=0;
- mpi_off = irank*DIMSIZE;
+ * Each process reads what process 0 wrote and verify.
+ * ==================================================*/
+ irank = 0;
+ mpi_off = irank * DIMSIZE;
if ((mpi_err = MPI_File_read_at(fh, mpi_off, readdata, DIMSIZE, MPI_BYTE,
- &mpi_stat))
- != MPI_SUCCESS){
- MPI_Error_string(mpi_err, mpi_err_str, &mpi_err_strlen);
- PRINTID;
- printf("MPI_File_read_at offset(%ld), bytes (%d), failed (%s)\n",
- (long) mpi_off, DIMSIZE, mpi_err_str);
- return 1;
+ &mpi_stat)) != MPI_SUCCESS) {
+ MPI_Error_string(mpi_err, mpi_err_str, &mpi_err_strlen);
+ PRINTID;
+ printf("MPI_File_read_at offset(%ld), bytes (%d), failed (%s)\n",
+ (long) mpi_off, DIMSIZE, mpi_err_str);
+ return 1;
};
- for (i=0; i < DIMSIZE; i++){
- expect_val = irank*DIMSIZE + i;
- if (readdata[i] != expect_val){
- PRINTID;
- printf("read data[%d:%d] got %02x, expect %02x\n", irank, i,
- readdata[i], expect_val);
- nerrs++;
- }
+ for (i = 0; i < DIMSIZE; i++) {
+ expect_val = irank * DIMSIZE + i;
+ if (readdata[i] != expect_val) {
+ PRINTID;
+ printf("read data[%d:%d] got %02x, expect %02x\n", irank, i,
+ readdata[i], expect_val);
+ nerrs++;
+ }
}
MPI_File_close(&fh);
- if (VERBOSE_HI){
- PRINTID;
- printf("%d data errors detected\n", nerrs);
+ if (VERBOSE_HI) {
+ PRINTID;
+ printf("%d data errors detected\n", nerrs);
}
mpi_err = MPI_Barrier(MPI_COMM_WORLD);
@@ -617,273 +619,268 @@ if (special_request & USEFSYNC){
/*
-Function: test_mpio_derived_dtype
-
-Test Whether the Displacement of MPI derived datatype
-(+ File_set_view + MPI_write)works or not on this MPI-IO package
-and this platform.
-
-1. Details for the test:
-1) Create two derived datatypes with MPI_Type_hindexed:
- datatype1:
- count = 1, blocklens = 1, offsets = 0,
- base type = MPI_BYTE(essentially a char)
- datatype2:
- count = 1, blocklens = 1, offsets = 1(byte),
- base type = MPI_BYTE
-
-2) Using these two derived datatypes,
- Build another derived datatype with MPI_Type_struct:
- advtype: derived from datatype1 and datatype2
- advtype:
- count = 2, blocklens[0] = 1, blocklens[1]=1,
- offsets[0] = 0, offsets[1] = 1(byte),
- bas_type[0]=datatype1,
- bas_type[1] = datatype2;
-
-3) Setting MPI file view with advtype
-4) Writing 2 bytes 1 to 2 using MPI_File_write to a file
-5) File content:
-Suppose the fill value of the file is 0(most machines indeed do so)
-and Fill value is embraced with "() in the following output:
-Expected output should be:
-1,0,2
-
-
-
-However, at some platforms, for example, IBM AIX(at March 23rd, 2005):
-the following values were obtained:
-1,2,0
-
-The problem is that the displacement of the second derived datatype(datatype2) which formed the final derived datatype(advtype)
+ Function: test_mpio_derived_dtype
+
+ Test Whether the Displacement of MPI derived datatype
+ (+ File_set_view + MPI_write)works or not on this MPI-IO package
+ and this platform.
+
+ 1. Details for the test:
+ 1) Create two derived datatypes with MPI_Type_create_hindexed:
+ datatype1:
+ count = 1, blocklens = 1, offsets = 0,
+ base type = MPI_BYTE(essentially a char)
+ datatype2:
+ count = 1, blocklens = 1, offsets = 1(byte),
+ base type = MPI_BYTE
+
+ 2) Using these two derived datatypes,
+ Build another derived datatype with MPI_Type_create_struct:
+ advtype: derived from datatype1 and datatype2
+ advtype:
+ count = 2, blocklens[0] = 1, blocklens[1]=1,
+ offsets[0] = 0, offsets[1] = 1(byte),
+ bas_type[0]=datatype1,
+ bas_type[1] = datatype2;
+
+ 3) Setting MPI file view with advtype
+ 4) Writing 2 bytes 1 to 2 using MPI_File_write to a file
+ 5) File content:
+ Suppose the fill value of the file is 0(most machines indeed do so)
+ and Fill value is embraced with "() in the following output:
+ Expected output should be:
+ 1,0,2
+
+
+
+ However, at some platforms, for example, IBM AIX(at March 23rd, 2005):
+ the following values were obtained:
+ 1,2,0
+
+ The problem is that the displacement of the second derived datatype(datatype2) which formed the final derived datatype(advtype)
has been put after the basic datatype(MPI_BYTE) of datatype2. This is a bug.
-2. This test will verify whether the complicated derived datatype is working on
-the current platform.
+ 2. This test will verify whether the complicated derived datatype is working on
+ the current platform.
-If this bug has been fixed in the previous not-working package, this test will issue a printf message to tell the developer to change
-the configuration specific file of HDF5 so that we can change our configurationsetting to support collective IO for irregular selections.
+ If this bug has been fixed in the previous not-working package, this test will issue a printf message to tell the developer to change
+ the configuration specific file of HDF5 so that we can change our configurationsetting to support collective IO for irregular selections.
-If it turns out that the previous working MPI-IO package no longer works, this test will also issue a message to inform the corresponding failure so that
-we can turn off collective IO support for irregular selections.
-*/
+ If it turns out that the previous working MPI-IO package no longer works, this test will also issue a message to inform the corresponding failure so that
+ we can turn off collective IO support for irregular selections.
+ */
static int test_mpio_derived_dtype(char *filename) {
MPI_File fh;
char mpi_err_str[MPI_MAX_ERROR_STRING];
- int mpi_err_strlen;
- int mpi_err;
- int i;
- int nerrors = 0; /* number of errors */
- MPI_Datatype etype,filetype;
- MPI_Datatype adv_filetype,bas_filetype[2];
- MPI_Datatype etypenew, filetypenew;
- MPI_Offset disp;
- MPI_Status Status;
- MPI_Aint adv_disp[2];
- MPI_Aint offsets[1];
- int blocklens[1],adv_blocklens[2];
- int count,outcount;
- int retcode;
-
- int mpi_rank,mpi_size;
-
- char buf[3],outbuf[3] = {0};
+ int mpi_err_strlen;
+ int mpi_err;
+ int i;
+ MPI_Datatype etype, filetype;
+ MPI_Datatype adv_filetype, bas_filetype[2];
+ MPI_Datatype filetypenew;
+ MPI_Offset disp;
+ MPI_Status Status;
+ MPI_Aint adv_disp[2];
+ MPI_Aint offsets[1];
+ int blocklens[1], adv_blocklens[2];
+ int count, outcount;
+ int retcode;
+
+ int mpi_rank, mpi_size;
+
+ char buf[3], outbuf[3] = { 0 };
MPI_Comm_size(MPI_COMM_WORLD, &mpi_size);
MPI_Comm_rank(MPI_COMM_WORLD, &mpi_rank);
retcode = 0;
- for(i=0;i<3;i++)
- buf[i] = i+1;
-
+ for (i = 0; i < 3; i++)
+ buf[i] = i + 1;
if ((mpi_err = MPI_File_open(MPI_COMM_WORLD, filename,
- MPI_MODE_RDWR | MPI_MODE_CREATE,
- MPI_INFO_NULL, &fh))
- != MPI_SUCCESS){
- MPI_Error_string(mpi_err, mpi_err_str, &mpi_err_strlen);
- printf("MPI_File_open failed (%s)\n", mpi_err_str);
- return 1;
+ MPI_MODE_RDWR | MPI_MODE_CREATE, MPI_INFO_NULL, &fh))
+ != MPI_SUCCESS) {
+ MPI_Error_string(mpi_err, mpi_err_str, &mpi_err_strlen);
+ printf("MPI_File_open failed (%s)\n", mpi_err_str);
+ return 1;
}
- disp = 0;
+ disp = 0;
etype = MPI_BYTE;
count = 1;
blocklens[0] = 1;
- offsets[0] = 0;
+ offsets[0] = 0;
- if((mpi_err= MPI_Type_hindexed(count,blocklens,offsets,MPI_BYTE,&filetype))
- != MPI_SUCCESS){
- MPI_Error_string(mpi_err, mpi_err_str, &mpi_err_strlen);
- printf("MPI_Type_contiguous failed (%s)\n", mpi_err_str);
- return 1;
+ if ((mpi_err = MPI_Type_create_hindexed(count, blocklens, offsets, MPI_BYTE,
+ &filetype)) != MPI_SUCCESS) {
+ MPI_Error_string(mpi_err, mpi_err_str, &mpi_err_strlen);
+ printf("MPI_Type_contiguous failed (%s)\n", mpi_err_str);
+ return 1;
}
- if((mpi_err=MPI_Type_commit(&filetype))!=MPI_SUCCESS){
+ if ((mpi_err = MPI_Type_commit(&filetype)) != MPI_SUCCESS) {
MPI_Error_string(mpi_err, mpi_err_str, &mpi_err_strlen);
- printf("MPI_Type_commit failed (%s)\n", mpi_err_str);
- return 1;
+ printf("MPI_Type_commit failed (%s)\n", mpi_err_str);
+ return 1;
}
count = 1;
- blocklens[0]=1;
+ blocklens[0] = 1;
offsets[0] = 1;
- if((mpi_err= MPI_Type_hindexed(count,blocklens,offsets,MPI_BYTE,&filetypenew))
- != MPI_SUCCESS){
- MPI_Error_string(mpi_err, mpi_err_str, &mpi_err_strlen);
- printf("MPI_Type_contiguous failed (%s)\n", mpi_err_str);
- return 1;
+ if ((mpi_err = MPI_Type_create_hindexed(count, blocklens, offsets, MPI_BYTE,
+ &filetypenew)) != MPI_SUCCESS) {
+ MPI_Error_string(mpi_err, mpi_err_str, &mpi_err_strlen);
+ printf("MPI_Type_contiguous failed (%s)\n", mpi_err_str);
+ return 1;
}
- if((mpi_err=MPI_Type_commit(&filetypenew))!=MPI_SUCCESS){
+ if ((mpi_err = MPI_Type_commit(&filetypenew)) != MPI_SUCCESS) {
MPI_Error_string(mpi_err, mpi_err_str, &mpi_err_strlen);
- printf("MPI_Type_commit failed (%s)\n", mpi_err_str);
- return 1;
+ printf("MPI_Type_commit failed (%s)\n", mpi_err_str);
+ return 1;
}
- outcount = 2;
+ outcount = 2;
adv_blocklens[0] = 1;
adv_blocklens[1] = 1;
- adv_disp[0] = 0;
- adv_disp[1] = 1;
- bas_filetype[0] = filetype;
- bas_filetype[1] = filetypenew;
-
- if((mpi_err= MPI_Type_struct(outcount,adv_blocklens,adv_disp,bas_filetype,&adv_filetype))
- != MPI_SUCCESS){
- MPI_Error_string(mpi_err, mpi_err_str, &mpi_err_strlen);
- printf("MPI_Type_struct failed (%s)\n", mpi_err_str);
- return 1;
+ adv_disp[0] = 0;
+ adv_disp[1] = 1;
+ bas_filetype[0] = filetype;
+ bas_filetype[1] = filetypenew;
+
+ if ((mpi_err = MPI_Type_create_struct(outcount, adv_blocklens, adv_disp,
+ bas_filetype, &adv_filetype)) != MPI_SUCCESS) {
+ MPI_Error_string(mpi_err, mpi_err_str, &mpi_err_strlen);
+ printf("MPI_Type_create_struct failed (%s)\n", mpi_err_str);
+ return 1;
}
- if((mpi_err=MPI_Type_commit(&adv_filetype))!=MPI_SUCCESS){
+ if ((mpi_err = MPI_Type_commit(&adv_filetype)) != MPI_SUCCESS) {
MPI_Error_string(mpi_err, mpi_err_str, &mpi_err_strlen);
- printf("MPI_Type_commit failed (%s)\n", mpi_err_str);
- return 1;
+ printf("MPI_Type_commit failed (%s)\n", mpi_err_str);
+ return 1;
}
-
- if((mpi_err = MPI_File_set_view(fh,disp,etype,adv_filetype,"native",MPI_INFO_NULL))!= MPI_SUCCESS){
- MPI_Error_string(mpi_err, mpi_err_str, &mpi_err_strlen);
- printf("MPI_File_set_view failed (%s)\n", mpi_err_str);
- return 1;
+ if ((mpi_err = MPI_File_set_view(fh, disp, etype, adv_filetype, "native",
+ MPI_INFO_NULL)) != MPI_SUCCESS) {
+ MPI_Error_string(mpi_err, mpi_err_str, &mpi_err_strlen);
+ printf("MPI_File_set_view failed (%s)\n", mpi_err_str);
+ return 1;
}
- if((mpi_err = MPI_File_write(fh,buf,3,MPI_BYTE,&Status))!= MPI_SUCCESS){
+ if ((mpi_err = MPI_File_write(fh, buf, 3, MPI_BYTE, &Status))
+ != MPI_SUCCESS) {
MPI_Error_string(mpi_err, mpi_err_str, &mpi_err_strlen);
- printf("MPI_File_write failed (%s)\n", mpi_err_str);
- return 1;
- ;
+ printf("MPI_File_write failed (%s)\n", mpi_err_str);
+ return 1;
}
-
- if((mpi_err = MPI_File_close(&fh)) != MPI_SUCCESS){
- MPI_Error_string(mpi_err, mpi_err_str, &mpi_err_strlen);
- printf("MPI_File_close failed (%s)\n", mpi_err_str);
- return 1;
+ if ((mpi_err = MPI_File_close(&fh)) != MPI_SUCCESS) {
+ MPI_Error_string(mpi_err, mpi_err_str, &mpi_err_strlen);
+ printf("MPI_File_close failed (%s)\n", mpi_err_str);
+ return 1;
}
-
- if((mpi_err = MPI_File_open(MPI_COMM_WORLD,filename,MPI_MODE_RDONLY,MPI_INFO_NULL,&fh)) != MPI_SUCCESS){
- MPI_Error_string(mpi_err, mpi_err_str, &mpi_err_strlen);
- printf("MPI_File_open failed (%s)\n", mpi_err_str);
- return 1;
+ if ((mpi_err = MPI_File_open(MPI_COMM_WORLD, filename, MPI_MODE_RDONLY,
+ MPI_INFO_NULL, &fh)) != MPI_SUCCESS) {
+ MPI_Error_string(mpi_err, mpi_err_str, &mpi_err_strlen);
+ printf("MPI_File_open failed (%s)\n", mpi_err_str);
+ return 1;
}
- if((mpi_err = MPI_File_set_view(fh,0,MPI_BYTE,MPI_BYTE,"native",MPI_INFO_NULL))!= MPI_SUCCESS){
+ if ((mpi_err = MPI_File_set_view(fh, 0, MPI_BYTE, MPI_BYTE, "native",
+ MPI_INFO_NULL)) != MPI_SUCCESS) {
MPI_Error_string(mpi_err, mpi_err_str, &mpi_err_strlen);
- printf("MPI_File_set_view failed (%s)\n", mpi_err_str);
- return 1;
+ printf("MPI_File_set_view failed (%s)\n", mpi_err_str);
+ return 1;
}
- if((mpi_err = MPI_File_read(fh,outbuf,3,MPI_BYTE,&Status))!=MPI_SUCCESS){
- MPI_Error_string(mpi_err, mpi_err_str, &mpi_err_strlen);
- printf("MPI_File_read failed (%s)\n", mpi_err_str);
- return 1;
+ if ((mpi_err = MPI_File_read(fh, outbuf, 3, MPI_BYTE, &Status))
+ != MPI_SUCCESS) {
+ MPI_Error_string(mpi_err, mpi_err_str, &mpi_err_strlen);
+ printf("MPI_File_read failed (%s)\n", mpi_err_str);
+ return 1;
}
- if(outbuf[2]==2) {
- retcode = 0;
- }
- else {
-/* if(mpi_rank == 0) {
- printf("complicated derived datatype is NOT working at this platform\n");
- printf("go back to hdf5/config and find the corresponding\n");
- printf("configure-specific file and change ?????\n");
- }
-*/
- retcode = -1;
- }
-
- if((mpi_err = MPI_File_close(&fh)) != MPI_SUCCESS){
- MPI_Error_string(mpi_err, mpi_err_str, &mpi_err_strlen);
- printf("MPI_File_close failed (%s)\n", mpi_err_str);
- return 1;
+ if (outbuf[2] == 2) {
+ retcode = 0;
+ } else {
+ /* if(mpi_rank == 0) {
+ printf("complicated derived datatype is NOT working at this platform\n");
+ printf("go back to hdf5/config and find the corresponding\n");
+ printf("configure-specific file and change ?????\n");
+ }
+ */
+ retcode = -1;
}
+ if ((mpi_err = MPI_File_close(&fh)) != MPI_SUCCESS) {
+ MPI_Error_string(mpi_err, mpi_err_str, &mpi_err_strlen);
+ printf("MPI_File_close failed (%s)\n", mpi_err_str);
+ return 1;
+ }
mpi_err = MPI_Barrier(MPI_COMM_WORLD);
- if(retcode == -1) {
- if(mpi_rank == 0) {
- printf("Complicated derived datatype is NOT working at this platform\n");
- printf(" Please report to help@hdfgroup.org about this problem.\n");
- }
- retcode = 1;
+ if (retcode == -1) {
+ if (mpi_rank == 0) {
+ printf(
+ "Complicated derived datatype is NOT working at this platform\n");
+ printf(" Please report to help@hdfgroup.org about this problem.\n");
+ }
+ retcode = 1;
}
return retcode;
}
/*
-Function: test_mpio_special_collective
+ Function: test_mpio_special_collective
-Test Whether collective IO is still working when more than one process
-has no contribution to IO. To properly test this case, at least FOUR
-processes are needed.
+ Test Whether collective IO is still working when more than one process
+ has no contribution to IO. To properly test this case, at least FOUR
+ processes are needed.
-1. Details for the test:
-1) Create one derived datatype with MPI_Type_hindexed:
+ 1. Details for the test:
+ 1) Create one derived datatype with MPI_Type_create_hindexed:
-2) Choosing at least two processes to contribute none for IO with
- the buf size inside MPI_Write_at_all to 0.
-3) Choosing at least two processes to have real contributions for IO.
-4) Do collective IO.
+ 2) Choosing at least two processes to contribute none for IO with
+ the buf size inside MPI_Write_at_all to 0.
+ 3) Choosing at least two processes to have real contributions for IO.
+ 4) Do collective IO.
-2. This test will fail with the MPI-IO package that doesn't support this. For example,
-mpich 1.2.6.
+ 2. This test will fail with the MPI-IO package that doesn't support this. For example,
+ mpich 1.2.6.
-If this bug has been fixed in the previous not-working package, this test will issue a printf message to tell the developer to change
-the configuration specific file of HDF5 so that we can change our configurationsetting to support special collective IO; currently only special collective IO.
+ If this bug has been fixed in the previous not-working package, this test will issue a printf message to tell the developer to change
+ the configuration specific file of HDF5 so that we can change our configurationsetting to support special collective IO; currently only special collective IO.
-If it turns out that the previous working MPI-IO package no longer works, this test will also issue a message to inform the corresponding failure so that
-we can turn off the support for special collective IO; currently only special collective IO.
-*/
+ If it turns out that the previous working MPI-IO package no longer works, this test will also issue a message to inform the corresponding failure so that
+ we can turn off the support for special collective IO; currently only special collective IO.
+ */
-static int
-test_mpio_special_collective(char *filename)
-{
- int mpi_size, mpi_rank;
+static int test_mpio_special_collective(char *filename) {
+ int mpi_size, mpi_rank;
MPI_File fh;
- MPI_Datatype etype,buftype,filetype;
+ MPI_Datatype etype, buftype, filetype;
char mpi_err_str[MPI_MAX_ERROR_STRING];
- int mpi_err_strlen;
- int mpi_err;
- char writedata[2*DIMSIZE];
+ int mpi_err_strlen;
+ int mpi_err;
+ char writedata[2 * DIMSIZE];
char filerep[7] = "native";
- int i;
- int count,bufcount;
+ int i;
+ int count, bufcount;
int blocklens[2];
MPI_Aint offsets[2];
- MPI_Offset mpi_off = 0;
- MPI_Status mpi_stat;
- int retcode = 0;
+ MPI_Offset mpi_off = 0;
+ MPI_Status mpi_stat;
+ int retcode = 0;
MPI_Comm_size(MPI_COMM_WORLD, &mpi_size);
MPI_Comm_rank(MPI_COMM_WORLD, &mpi_rank);
/* create MPI data type */
etype = MPI_BYTE;
- if(mpi_rank == 0 || mpi_rank == 1) {
+ if (mpi_rank == 0 || mpi_rank == 1) {
count = DIMSIZE;
bufcount = 1;
} /* end if */
@@ -893,38 +890,32 @@ test_mpio_special_collective(char *filename)
} /* end else */
blocklens[0] = count;
- offsets[0] = mpi_rank*count;
+ offsets[0] = mpi_rank * count;
blocklens[1] = count;
- offsets[1] = (mpi_size+mpi_rank)*count;
-
- if(count !=0) {
- if((mpi_err = MPI_Type_hindexed(2,
- blocklens,
- offsets,
- etype,
- &filetype)) != MPI_SUCCESS) {
+ offsets[1] = (mpi_size + mpi_rank) * count;
+
+ if (count != 0) {
+ if ((mpi_err = MPI_Type_create_hindexed(2, blocklens, offsets, etype,
+ &filetype)) != MPI_SUCCESS) {
MPI_Error_string(mpi_err, mpi_err_str, &mpi_err_strlen);
printf("MPI_Type_contiguous failed (%s)\n", mpi_err_str);
return 1;
} /* end if */
- if((mpi_err = MPI_Type_commit(&filetype)) != MPI_SUCCESS) {
+ if ((mpi_err = MPI_Type_commit(&filetype)) != MPI_SUCCESS) {
MPI_Error_string(mpi_err, mpi_err_str, &mpi_err_strlen);
printf("MPI_Type_commit failed (%s)\n", mpi_err_str);
return 1;
} /* end if */
- if((mpi_err = MPI_Type_hindexed(2,
- blocklens,
- offsets,
- etype,
- &buftype)) != MPI_SUCCESS) {
+ if ((mpi_err = MPI_Type_create_hindexed(2, blocklens, offsets, etype,
+ &buftype)) != MPI_SUCCESS) {
MPI_Error_string(mpi_err, mpi_err_str, &mpi_err_strlen);
printf("MPI_Type_contiguous failed (%s)\n", mpi_err_str);
return 1;
} /* end if */
- if((mpi_err = MPI_Type_commit(&buftype)) != MPI_SUCCESS) {
+ if ((mpi_err = MPI_Type_commit(&buftype)) != MPI_SUCCESS) {
MPI_Error_string(mpi_err, mpi_err_str, &mpi_err_strlen);
printf("MPI_Type_commit failed (%s)\n", mpi_err_str);
return 1;
@@ -932,46 +923,36 @@ test_mpio_special_collective(char *filename)
} /* end if */
else {
filetype = MPI_BYTE;
- buftype = MPI_BYTE;
+ buftype = MPI_BYTE;
} /* end else */
/* Open a file */
- if ((mpi_err = MPI_File_open(MPI_COMM_WORLD,
- filename,
- MPI_MODE_RDWR | MPI_MODE_CREATE,
- MPI_INFO_NULL,
- &fh)) != MPI_SUCCESS) {
+ if ((mpi_err = MPI_File_open(MPI_COMM_WORLD, filename,
+ MPI_MODE_RDWR | MPI_MODE_CREATE, MPI_INFO_NULL, &fh))
+ != MPI_SUCCESS) {
MPI_Error_string(mpi_err, mpi_err_str, &mpi_err_strlen);
printf("MPI_File_open failed (%s)\n", mpi_err_str);
return 1;
} /* end if */
/* each process writes some data */
- for (i=0; i < 2*DIMSIZE; i++)
- writedata[i] = (char)(mpi_rank*DIMSIZE + i);
+ for (i = 0; i < 2 * DIMSIZE; i++)
+ writedata[i] = (char) (mpi_rank * DIMSIZE + i);
/* Set the file view */
- if((mpi_err = MPI_File_set_view(fh,
- mpi_off,
- MPI_BYTE,
- filetype,
- filerep,
- MPI_INFO_NULL)) != MPI_SUCCESS) {
+ if ((mpi_err = MPI_File_set_view(fh, mpi_off, MPI_BYTE, filetype, filerep,
+ MPI_INFO_NULL)) != MPI_SUCCESS) {
MPI_Error_string(mpi_err, mpi_err_str, &mpi_err_strlen);
printf("MPI_File_set_view failed (%s)\n", mpi_err_str);
return 1;
} /* end if */
/* Collectively write into the file */
- if ((mpi_err = MPI_File_write_at_all(fh,
- mpi_off,
- writedata,
- bufcount,
- buftype,
- &mpi_stat)) != MPI_SUCCESS) {
+ if ((mpi_err = MPI_File_write_at_all(fh, mpi_off, writedata, bufcount,
+ buftype, &mpi_stat)) != MPI_SUCCESS) {
MPI_Error_string(mpi_err, mpi_err_str, &mpi_err_strlen);
printf("MPI_File_write_at offset(%ld), bytes (%d), failed (%s)\n",
- (long) mpi_off, bufcount, mpi_err_str);
+ (long) mpi_off, bufcount, mpi_err_str);
return 1;
} /* end if */
@@ -984,8 +965,8 @@ test_mpio_special_collective(char *filename)
/* Perform a barrier */
mpi_err = MPI_Barrier(MPI_COMM_WORLD);
- if(retcode != 0) {
- if(mpi_rank == 0) {
+ if (retcode != 0) {
+ if (mpi_rank == 0) {
printf("special collective IO is NOT working at this platform\n");
printf(" Please report to help@hdfgroup.org about this problem.\n");
} /* end if */
@@ -999,71 +980,69 @@ test_mpio_special_collective(char *filename)
/*
* parse the command line options
*/
-static int
-parse_options(int argc, char **argv)
-{
- while (--argc){
- if (**(++argv) != '-'){
- break;
- }else{
- switch(*(*argv+1)){
- case 'v': if (*((*argv+1)+1))
- ParseTestVerbosity((*argv+1)+1);
- else
- SetTestVerbosity(VERBO_MED);
- break;
- case 'f': if (--argc < 1) {
- nerrors++;
- return(1);
- }
- if (**(++argv) == '-') {
- nerrors++;
- return(1);
- }
- paraprefix = *argv;
- break;
- case 'h': /* print help message--return with nerrors set */
- return(1);
- default: nerrors++;
- return(1);
- }
- }
+static int parse_options(int argc, char **argv) {
+ while (--argc) {
+ if (**(++argv) != '-') {
+ break;
+ } else {
+ switch (*(*argv + 1)) {
+ case 'v':
+ if (*((*argv + 1) + 1))
+ ParseTestVerbosity((*argv + 1) + 1);
+ else
+ SetTestVerbosity(VERBO_MED);
+ break;
+ case 'f':
+ if (--argc < 1) {
+ nerrors++;
+ return (1);
+ }
+ if (**(++argv) == '-') {
+ nerrors++;
+ return (1);
+ }
+ paraprefix = *argv;
+ break;
+ case 'h': /* print help message--return with nerrors set */
+ return (1);
+ default:
+ nerrors++;
+ return (1);
+ }
+ }
} /*while*/
/* compose the test filenames */
{
- int i, n;
- hid_t plist;
-
- plist = H5Pcreate (H5P_FILE_ACCESS);
- H5Pset_fapl_mpio(plist, MPI_COMM_WORLD, MPI_INFO_NULL);
- n = sizeof(FILENAME)/sizeof(FILENAME[0]) - 1; /* exclude the NULL */
-
- for (i=0; i < n; i++)
- if (h5_fixname(FILENAME[i],plist,filenames[i],sizeof(filenames[i]))
- == NULL){
- printf("h5_fixname failed\n");
- nerrors++;
- return(1);
- }
- H5Pclose(plist);
- if (VERBOSE_MED){
- printf("Test filenames are:\n");
- for (i=0; i < n; i++)
- printf(" %s\n", filenames[i]);
- }
+ int i, n;
+ hid_t plist;
+
+ plist = H5Pcreate(H5P_FILE_ACCESS);
+ H5Pset_fapl_mpio(plist, MPI_COMM_WORLD, MPI_INFO_NULL);
+ n = sizeof(FILENAME) / sizeof(FILENAME[0]) - 1; /* exclude the NULL */
+
+ for (i = 0; i < n; i++)
+ if (h5_fixname(FILENAME[i], plist, filenames[i],
+ sizeof(filenames[i])) == NULL) {
+ printf("h5_fixname failed\n");
+ nerrors++;
+ return (1);
+ }
+ H5Pclose(plist);
+ if (VERBOSE_MED) {
+ printf("Test filenames are:\n");
+ for (i = 0; i < n; i++)
+ printf(" %s\n", filenames[i]);
+ }
}
- return(0);
+ return (0);
}
-
/*
* Show command usage
*/
-static void
-usage(void)
-{
+static void usage(void) {
printf("Usage: t_mpi [-v<verbosity>] [-f <prefix>]\n");
printf("\t-v<verbosity>\tset verbose level (0-9,l,m,h)\n");
printf("\t-f <prefix>\tfilename prefix\n");
@@ -1073,19 +1052,14 @@ usage(void)
/*
* return the sum of all errors.
*/
-static int
-errors_sum(int nerrs)
-{
+static int errors_sum(int nerrs) {
int temp;
MPI_Allreduce(&nerrs, &temp, 1, MPI_INT, MPI_SUM, MPI_COMM_WORLD);
- return(temp);
+ return (temp);
}
-
-int
-main(int argc, char **argv)
-{
- int mpi_size, mpi_rank; /* mpi variables */
+int main(int argc, char **argv) {
+ int mpi_size, mpi_rank; /* mpi variables */
int ret_code;
MPI_Init(&argc, &argv);
@@ -1093,78 +1067,76 @@ main(int argc, char **argv)
MPI_Comm_rank(MPI_COMM_WORLD, &mpi_rank);
/* Attempt to turn off atexit post processing so that in case errors
- * happen during the test and the process is aborted, it will not get
- * hang in the atexit post processing in which it may try to make MPI
- * calls. By then, MPI calls may not work.
- */
- if (H5dont_atexit() < 0){
- printf("Failed to turn off atexit processing. Continue.\n", mpi_rank);
+ * happen during the test and the process is aborted, it will not get
+ * hang in the atexit post processing in which it may try to make MPI
+ * calls. By then, MPI calls may not work.
+ */
+ if (H5dont_atexit() < 0) {
+ printf("Failed to turn off atexit processing. Continue.\n");
};
H5open();
- if (parse_options(argc, argv) != 0){
- if (MAINPROCESS)
- usage();
- goto finish;
+ if (parse_options(argc, argv) != 0) {
+ if (MAINPROCESS)
+ usage();
+ goto finish;
}
- if (MAINPROCESS){
- printf("===================================\n");
- printf("MPI functionality tests\n");
- printf("===================================\n");
+ if (MAINPROCESS) {
+ printf("===================================\n");
+ printf("MPI functionality tests\n");
+ printf("===================================\n");
}
if (VERBOSE_MED)
- h5_show_hostname();
+ h5_show_hostname();
- fapl = H5Pcreate (H5P_FILE_ACCESS);
+ fapl = H5Pcreate(H5P_FILE_ACCESS);
H5Pset_fapl_mpio(fapl, MPI_COMM_WORLD, MPI_INFO_NULL);
/* set alarm. */
ALARM_ON;
-
/*=======================================
- * MPIO 1 write Many read test
- *=======================================*/
+ * MPIO 1 write Many read test
+ *=======================================*/
MPI_BANNER("MPIO 1 write Many read test...");
ret_code = test_mpio_1wMr(filenames[0], USENONE);
ret_code = errors_sum(ret_code);
- if (mpi_rank==0 && ret_code > 0){
- printf("***FAILED with %d total errors\n", ret_code);
- nerrors += ret_code;
+ if (mpi_rank == 0 && ret_code > 0) {
+ printf("***FAILED with %d total errors\n", ret_code);
+ nerrors += ret_code;
}
/* test atomicity and file sync in high verbose mode only */
/* since they often hang when broken and PHDF5 does not use them. */
- if (VERBOSE_HI){
- MPI_BANNER("MPIO 1 write Many read test with atomicity...");
- ret_code = test_mpio_1wMr(filenames[0], USEATOM);
- ret_code = errors_sum(ret_code);
- if (mpi_rank==0 && ret_code > 0){
- printf("***FAILED with %d total errors\n", ret_code);
- nerrors += ret_code;
- }
-
- MPI_BANNER("MPIO 1 write Many read test with file sync...");
- ret_code = test_mpio_1wMr(filenames[0], USEFSYNC);
- ret_code = errors_sum(ret_code);
- if (mpi_rank==0 && ret_code > 0){
- printf("***FAILED with %d total errors\n", ret_code);
- nerrors += ret_code;
- }
- }
+ if (VERBOSE_HI) {
+ MPI_BANNER("MPIO 1 write Many read test with atomicity...");
+ ret_code = test_mpio_1wMr(filenames[0], USEATOM);
+ ret_code = errors_sum(ret_code);
+ if (mpi_rank == 0 && ret_code > 0) {
+ printf("***FAILED with %d total errors\n", ret_code);
+ nerrors += ret_code;
+ }
+ MPI_BANNER("MPIO 1 write Many read test with file sync...");
+ ret_code = test_mpio_1wMr(filenames[0], USEFSYNC);
+ ret_code = errors_sum(ret_code);
+ if (mpi_rank == 0 && ret_code > 0) {
+ printf("***FAILED with %d total errors\n", ret_code);
+ nerrors += ret_code;
+ }
+ }
/*=======================================
- * MPIO MPIO File size range test
- *=======================================*/
+ * MPIO MPIO File size range test
+ *=======================================*/
MPI_BANNER("MPIO File size range test...");
#ifndef H5_HAVE_WIN32_API
ret_code = test_mpio_gb_file(filenames[0]);
ret_code = errors_sum(ret_code);
- if (mpi_rank==0 && ret_code > 0){
- printf("***FAILED with %d total errors\n", ret_code);
- nerrors += ret_code;
+ if (mpi_rank == 0 && ret_code > 0) {
+ printf("***FAILED with %d total errors\n", ret_code);
+ nerrors += ret_code;
}
#else
if (mpi_rank==0)
@@ -1172,30 +1144,30 @@ main(int argc, char **argv)
#endif
/*=======================================
- * MPIO independent overlapping writes
- *=======================================*/
+ * MPIO independent overlapping writes
+ *=======================================*/
MPI_BANNER("MPIO independent overlapping writes...");
ret_code = test_mpio_overlap_writes(filenames[0]);
ret_code = errors_sum(ret_code);
- if (mpi_rank==0 && ret_code > 0){
- printf("***FAILED with %d total errors\n", ret_code);
- nerrors += ret_code;
+ if (mpi_rank == 0 && ret_code > 0) {
+ printf("***FAILED with %d total errors\n", ret_code);
+ nerrors += ret_code;
}
/*=======================================
- * MPIO complicated derived datatype test
- *=======================================*/
+ * MPIO complicated derived datatype test
+ *=======================================*/
MPI_BANNER("MPIO complicated derived datatype test...");
ret_code = test_mpio_derived_dtype(filenames[0]);
ret_code = errors_sum(ret_code);
- if (mpi_rank==0 && ret_code > 0){
- printf("***FAILED with %d total errors\n", ret_code);
- nerrors += ret_code;
+ if (mpi_rank == 0 && ret_code > 0) {
+ printf("***FAILED with %d total errors\n", ret_code);
+ nerrors += ret_code;
}
/*=======================================
- * MPIO special collective IO test
- *=======================================*/
+ * MPIO special collective IO test
+ *=======================================*/
if (mpi_size < 4) {
MPI_BANNER("MPIO special collective io test SKIPPED.");
if (mpi_rank == 0)
@@ -1207,28 +1179,26 @@ main(int argc, char **argv)
MPI_BANNER("MPIO special collective io test...");
ret_code = test_mpio_special_collective(filenames[0]);
-sc_finish:
- ret_code = errors_sum(ret_code);
- if (mpi_rank==0 && ret_code > 0){
- printf("***FAILED with %d total errors\n", ret_code);
- nerrors += ret_code;
+ sc_finish: ret_code = errors_sum(ret_code);
+ if (mpi_rank == 0 && ret_code > 0) {
+ printf("***FAILED with %d total errors\n", ret_code);
+ nerrors += ret_code;
}
-
-finish:
+ finish:
/* make sure all processes are finished before final report, cleanup
- * and exit.
- */
+ * and exit.
+ */
MPI_Barrier(MPI_COMM_WORLD);
- if (MAINPROCESS){ /* only process 0 reports */
- printf("===================================\n");
- if (nerrors){
- printf("***MPI tests detected %d errors***\n", nerrors);
- }
- else{
- printf("MPI tests finished with no errors\n");
- }
- printf("===================================\n");
+ if (MAINPROCESS) { /* only process 0 reports */
+ printf("===================================\n");
+ if (nerrors) {
+ printf("***MPI tests detected %d errors***\n", nerrors);
+ }
+ else {
+ printf("MPI tests finished with no errors\n");
+ }
+ printf("===================================\n");
}
/* turn off alarm */
@@ -1241,6 +1211,6 @@ finish:
MPI_Finalize();
/* cannot just return (nerrors) because exit code is limited to 1byte */
- return(nerrors!=0);
+ return (nerrors != 0);
}
diff --git a/testpar/t_pflush1.c b/testpar/t_pflush1.c
index 0782f3d..27b561b 100644
--- a/testpar/t_pflush1.c
+++ b/testpar/t_pflush1.c
@@ -15,13 +15,12 @@
* Programmer: Leon Arber <larber@uiuc.edu>
* Sept. 28, 2006.
*
- * Purpose: This is the first half of a two-part test that makes sure
- * that a file can be read after a parallel application crashes as long
- * as the file was flushed first. We simulate a crash by
- * calling _exit(0) since this doesn't flush HDF5 caches but
- * still exits with success.
+ * Purpose: This is the first half of a two-part test that makes sure
+ * that a file can be read after a parallel application crashes
+ * as long as the file was flushed first. We simulate a crash by
+ * calling _exit() since this doesn't flush HDF5 caches but
+ * still exits with success.
*/
-#include <mpi.h>
#include "h5test.h"
const char *FILENAME[] = {
@@ -30,171 +29,190 @@ const char *FILENAME[] = {
NULL
};
-static double the_data[100][100];
+static int data_g[100][100];
+#define N_GROUPS 100
+
+
/*-------------------------------------------------------------------------
- * Function: create_file
- *
- * Purpose: Creates file used in part 1 of the test
+ * Function: create_test_file
*
- * Return: Success: 0
+ * Purpose: Creates the file used in part 1 of the test
*
- * Failure: 1
+ * Return: Success: A valid file ID
+ * Failure: H5I_INVALID_HID
*
- * Programmer: Leon Arber
+ * Programmer: Leon Arber
* Sept. 26, 2006
*
- * Modifications:
- *
*-------------------------------------------------------------------------
*/
static hid_t
-create_file(char* name, hid_t fapl)
+create_test_file(char *name, hid_t fapl_id)
{
- hid_t file, dcpl, space, dset, groups, grp, plist;
- hsize_t ds_size[2] = {100, 100};
- hsize_t ch_size[2] = {5, 5};
- hsize_t i, j;
-
-
-
- if((file=H5Fcreate(name, H5F_ACC_TRUNC, H5P_DEFAULT, fapl)) < 0) goto error;
+ hid_t fid = H5I_INVALID_HID;
+ hid_t dcpl_id = H5I_INVALID_HID;
+ hid_t sid = H5I_INVALID_HID;
+ hid_t did = H5I_INVALID_HID;
+ hid_t top_level_gid = H5I_INVALID_HID;
+ hid_t gid = H5I_INVALID_HID;
+ hid_t dxpl_id = H5I_INVALID_HID;
+ hsize_t dims[2] = {100, 100};
+ hsize_t chunk_dims[2] = {5, 5};
+ hsize_t i, j;
+
+ if((fid = H5Fcreate(name, H5F_ACC_TRUNC, H5P_DEFAULT, fapl_id)) < 0)
+ goto error;
/* Create a chunked dataset */
- if((dcpl = H5Pcreate(H5P_DATASET_CREATE)) < 0) goto error;
- if(H5Pset_chunk(dcpl, 2, ch_size) < 0) goto error;
- if((space = H5Screate_simple(2, ds_size, NULL)) < 0) goto error;
- if((dset = H5Dcreate2(file, "dset", H5T_NATIVE_FLOAT, space, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0)
- goto error;
-
- plist = H5Pcreate(H5P_DATASET_XFER);
- H5Pset_dxpl_mpio(plist, H5FD_MPIO_COLLECTIVE);
-
+ if((dcpl_id = H5Pcreate(H5P_DATASET_CREATE)) < 0)
+ goto error;
+ if(H5Pset_chunk(dcpl_id, 2, chunk_dims) < 0)
+ goto error;
+ if((sid = H5Screate_simple(2, dims, NULL)) < 0)
+ goto error;
+ if((did = H5Dcreate2(fid, "dset", H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0)
+ goto error;
+
+ if((dxpl_id = H5Pcreate(H5P_DATASET_XFER)) < 0)
+ goto error;
+ if(H5Pset_dxpl_mpio(dxpl_id, H5FD_MPIO_COLLECTIVE) < 0)
+ goto error;
/* Write some data */
- for(i = 0; i < ds_size[0]; i++) {
- /*
- * The extra cast in the following statement is a bug workaround
- * for the Win32 version 5.0 compiler.
- * 1998-11-06 ptl
- */
- for(j = 0; j < ds_size[1]; j++)
- the_data[i][j] = (double)(hssize_t)i/(hssize_t)(j+1);
- }
- if(H5Dwrite(dset, H5T_NATIVE_DOUBLE, space, space, plist, the_data) < 0) goto error;
+ for(i = 0; i < dims[0]; i++)
+ for(j = 0; j < dims[1]; j++)
+ data_g[i][j] = (int)(i + (i * j) + j);
+
+ if(H5Dwrite(did, H5T_NATIVE_INT, sid, sid, dxpl_id, data_g) < 0)
+ goto error;
/* Create some groups */
- if((groups = H5Gcreate2(file, "some_groups", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) goto error;
- for(i = 0; i < 100; i++) {
- sprintf(name, "grp%02u", (unsigned)i);
- if((grp = H5Gcreate2(groups, name, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) goto error;
- if(H5Gclose(grp) < 0) goto error;
+ if((top_level_gid = H5Gcreate2(fid, "some_groups", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0)
+ goto error;
+ for(i = 0; i < N_GROUPS; i++) {
+ HDsprintf(name, "grp%02u", (unsigned)i);
+ if((gid = H5Gcreate2(top_level_gid, name, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0)
+ goto error;
+ if(H5Gclose(gid) < 0)
+ goto error;
}
- return file;
+ return fid;
error:
- HD_exit(1);
-}
+ return H5I_INVALID_HID;
+} /* end create_test_file() */
+
/*-------------------------------------------------------------------------
- * Function: main
+ * Function: main
*
- * Purpose: Part 1 of a two-part H5Fflush() test.
+ * Purpose: Part 1 of a two-part parallel H5Fflush() test.
*
- * Return: Success: 0
+ * Return: EXIT_FAILURE (always)
*
- * Failure: 1
- *
- * Programmer: Robb Matzke
+ * Programmer: Robb Matzke
* Friday, October 23, 1998
*
- * Modifications:
- * Leon Arber
- * Sept. 26, 2006, expand test to check for failure if H5Fflush is not called.
- *
- *
*-------------------------------------------------------------------------
*/
int
main(int argc, char* argv[])
{
- hid_t file1, file2, fapl;
- MPI_File *mpifh_p = NULL;
- char name[1024];
- const char *envval = NULL;
- int mpi_size, mpi_rank;
- MPI_Comm comm = MPI_COMM_WORLD;
- MPI_Info info = MPI_INFO_NULL;
+ hid_t fid1 = H5I_INVALID_HID;
+ hid_t fid2 = H5I_INVALID_HID;
+ hid_t fapl_id = H5I_INVALID_HID;
+ MPI_File *mpifh_p = NULL;
+ char name[1024];
+ const char *envval = NULL;
+ int mpi_size;
+ int mpi_rank;
+ MPI_Comm comm = MPI_COMM_WORLD;
+ MPI_Info info = MPI_INFO_NULL;
MPI_Init(&argc, &argv);
MPI_Comm_size(comm, &mpi_size);
MPI_Comm_rank(comm, &mpi_rank);
- fapl = H5Pcreate(H5P_FILE_ACCESS);
- H5Pset_fapl_mpio(fapl, comm, info);
-
if(mpi_rank == 0)
- TESTING("H5Fflush (part1)");
+ TESTING("H5Fflush (part1)");
+
+ /* Don't run using the split VFD */
envval = HDgetenv("HDF5_DRIVER");
if(envval == NULL)
envval = "nomatch";
- if(HDstrcmp(envval, "split")) {
- /* Create the file */
- h5_fixname(FILENAME[0], fapl, name, sizeof name);
- file1 = create_file(name, fapl);
- /* Flush and exit without closing the library */
- if(H5Fflush(file1, H5F_SCOPE_GLOBAL) < 0) goto error;
-
- /* Create the other file which will not be flushed */
- h5_fixname(FILENAME[1], fapl, name, sizeof name);
- file2 = create_file(name, fapl);
-
-
- if(mpi_rank == 0)
- PASSED();
- fflush(stdout);
- fflush(stderr);
- } /* end if */
- else {
- SKIPPED();
- puts(" Test not compatible with current Virtual File Driver");
- } /* end else */
-
- /*
- * Some systems like AIX do not like files not closed when MPI_Finalize
+
+ if(!HDstrcmp(envval, "split")) {
+ if(mpi_rank == 0) {
+ SKIPPED();
+ HDputs(" Test not compatible with current Virtual File Driver");
+ }
+ MPI_Finalize();
+ HDexit(EXIT_FAILURE);
+ }
+
+ if((fapl_id = H5Pcreate(H5P_FILE_ACCESS)) < 0)
+ goto error;
+ if(H5Pset_fapl_mpio(fapl_id, comm, info) < 0)
+ goto error;
+
+ /* Create the file */
+ h5_fixname(FILENAME[0], fapl_id, name, sizeof(name));
+ if((fid1 = create_test_file(name, fapl_id)) < 0)
+ goto error;
+ /* Flush and exit without closing the library */
+ if(H5Fflush(fid1, H5F_SCOPE_GLOBAL) < 0)
+ goto error;
+
+ /* Create the other file which will not be flushed */
+ h5_fixname(FILENAME[1], fapl_id, name, sizeof(name));
+ if((fid2 = create_test_file(name, fapl_id)) < 0)
+ goto error;
+
+ if(mpi_rank == 0)
+ PASSED();
+
+ HDfflush(stdout);
+ HDfflush(stderr);
+
+ /* Some systems like AIX do not like files not being closed when MPI_Finalize
* is called. So, we need to get the MPI file handles, close them by hand.
* Then the _exit is still needed to stop at_exit from happening in some systems.
* Note that MPIO VFD returns the address of the file-handle in the VFD struct
* because MPI_File_close wants to modify the file-handle variable.
*/
- /* close file1 */
- if(H5Fget_vfd_handle(file1, fapl, (void **)&mpifh_p) < 0) {
- printf("H5Fget_vfd_handle for file1 failed\n");
- goto error;
- } /* end if */
- if(MPI_File_close(mpifh_p) != MPI_SUCCESS) {
- printf("MPI_File_close for file1 failed\n");
- goto error;
- } /* end if */
- /* close file2 */
- if(H5Fget_vfd_handle(file2, fapl, (void **)&mpifh_p) < 0) {
- printf("H5Fget_vfd_handle for file2 failed\n");
- goto error;
- } /* end if */
- if(MPI_File_close(mpifh_p) != MPI_SUCCESS) {
- printf("MPI_File_close for file2 failed\n");
- goto error;
- } /* end if */
-
- fflush(stdout);
- fflush(stderr);
- HD_exit(0);
+ /* Close file 1 */
+ if(H5Fget_vfd_handle(fid1, fapl_id, (void **)&mpifh_p) < 0)
+ goto error;
+ if(MPI_File_close(mpifh_p) != MPI_SUCCESS)
+ goto error;
+
+ /* Close file 2 */
+ if(H5Fget_vfd_handle(fid2, fapl_id, (void **)&mpifh_p) < 0)
+ goto error;
+ if(MPI_File_close(mpifh_p) != MPI_SUCCESS)
+ goto error;
+
+ HDfflush(stdout);
+ HDfflush(stderr);
+
+ /* Always exit with a failure code!
+ *
+ * In accordance with the standard, not having all processes
+ * call MPI_Finalize() can be considered an error, so mpiexec
+ * et al. may indicate failure on return. It's much easier to
+ * always ignore the failure condition than to handle some
+ * platforms returning success and others failure.
+ */
+ HD_exit(EXIT_FAILURE);
error:
- fflush(stdout);
- fflush(stderr);
- HD_exit(1);
-}
+ HDfflush(stdout);
+ HDfflush(stderr);
+ HDprintf("*** ERROR ***\n");
+ HDprintf("THERE WAS A REAL ERROR IN t_pflush1.\n");
+ HD_exit(EXIT_FAILURE);
+} /* end main() */
diff --git a/testpar/t_pflush2.c b/testpar/t_pflush2.c
index bd8ce78..f58e5a5 100644
--- a/testpar/t_pflush2.c
+++ b/testpar/t_pflush2.c
@@ -30,118 +30,124 @@ const char *FILENAME[] = {
NULL
};
-static double the_data[100][100];
+static int data_g[100][100];
+#define N_GROUPS 100
/*-------------------------------------------------------------------------
- * Function: check_file
+ * Function: check_test_file
*
- * Purpose: Part 2 of a two-part H5Fflush() test.
+ * Purpose: Part 2 of a two-part H5Fflush() test.
*
- * Return: Success: 0
+ * Return: SUCCEED/FAIL
*
- * Failure: 1
- *
- * Programmer: Leon Arber
+ * Programmer: Leon Arber
* Sept. 26, 2006.
*
*-------------------------------------------------------------------------
*/
-static int
-check_file(char* name, hid_t fapl)
+static herr_t
+check_test_file(char* name, hid_t fapl_id)
{
- hid_t file, space, dset, groups, grp, plist;
- hsize_t ds_size[2];
- double error;
- hsize_t i, j;
-
- plist = H5Pcreate(H5P_DATASET_XFER);
- H5Pset_dxpl_mpio(plist, H5FD_MPIO_COLLECTIVE);
- if((file = H5Fopen(name, H5F_ACC_RDONLY, fapl)) < 0) goto error;
+ hid_t fid = H5I_INVALID_HID;
+ hid_t sid = H5I_INVALID_HID;
+ hid_t did = H5I_INVALID_HID;
+ hid_t top_level_gid = H5I_INVALID_HID;
+ hid_t gid = H5I_INVALID_HID;
+ hid_t dxpl_id = H5I_INVALID_HID;
+ hsize_t dims[2];
+ int val;
+ hsize_t i, j;
+
+ if((dxpl_id = H5Pcreate(H5P_DATASET_XFER)) < 0)
+ goto error;
+ if(H5Pset_dxpl_mpio(dxpl_id, H5FD_MPIO_COLLECTIVE) < 0)
+ goto error;
+ if((fid = H5Fopen(name, H5F_ACC_RDONLY, fapl_id)) < 0)
+ goto error;
/* Open the dataset */
- if((dset = H5Dopen2(file, "dset", H5P_DEFAULT)) < 0) goto error;
- if((space = H5Dget_space(dset)) < 0) goto error;
- if(H5Sget_simple_extent_dims(space, ds_size, NULL) < 0) goto error;
- assert(100==ds_size[0] && 100==ds_size[1]);
+ if((did = H5Dopen2(fid, "dset", H5P_DEFAULT)) < 0)
+ goto error;
+ if((sid = H5Dget_space(did)) < 0)
+ goto error;
+ if(H5Sget_simple_extent_dims(sid, dims, NULL) < 0)
+ goto error;
+ HDassert(100 == dims[0] && 100 == dims[1]);
/* Read some data */
- if (H5Dread(dset, H5T_NATIVE_DOUBLE, space, space, plist,
- the_data) < 0) goto error;
- for (i=0; i<ds_size[0]; i++) {
- for (j=0; j<ds_size[1]; j++) {
- /*
- * The extra cast in the following statement is a bug workaround
- * for the Win32 version 5.0 compiler.
- * 1998-11-06 ptl
- */
- error = fabs(the_data[i][j]-(double)(hssize_t)i/((hssize_t)j+1));
- if (error>0.0001) {
- H5_FAILED();
- printf(" dset[%lu][%lu] = %g\n",
- (unsigned long)i, (unsigned long)j, the_data[i][j]);
- printf(" should be %g\n",
- (double)(hssize_t)i/(hssize_t)(j+1));
- goto error;
- }
- }
+ if(H5Dread(did, H5T_NATIVE_INT, sid, sid, dxpl_id, data_g) < 0)
+ goto error;
+ for(i = 0; i < dims[0]; i++) {
+ for(j = 0; j < dims[1]; j++) {
+ val = (int)(i + (i * j) + j);
+ if(data_g[i][j] != val) {
+ H5_FAILED();
+ HDprintf(" data_g[%lu][%lu] = %d\n", (unsigned long)i, (unsigned long)j, data_g[i][j]);
+ HDprintf(" should be %d\n", val);
+ }
+ }
}
/* Open some groups */
- if((groups = H5Gopen2(file, "some_groups", H5P_DEFAULT)) < 0) goto error;
- for(i = 0; i < 100; i++) {
- sprintf(name, "grp%02u", (unsigned)i);
- if((grp = H5Gopen2(groups, name, H5P_DEFAULT)) < 0) goto error;
- if(H5Gclose(grp) < 0) goto error;
+ if((top_level_gid = H5Gopen2(fid, "some_groups", H5P_DEFAULT)) < 0)
+ goto error;
+ for(i = 0; i < N_GROUPS; i++) {
+ HDsprintf(name, "grp%02u", (unsigned)i);
+ if((gid = H5Gopen2(top_level_gid, name, H5P_DEFAULT)) < 0)
+ goto error;
+ if(H5Gclose(gid) < 0)
+ goto error;
}
- if(H5Gclose(groups) < 0) goto error;
- if(H5Dclose(dset) < 0) goto error;
- if(H5Fclose(file) < 0) goto error;
- if(H5Pclose(plist) < 0) goto error;
- if(H5Sclose(space) < 0) goto error;
+ if(H5Gclose(top_level_gid) < 0)
+ goto error;
+ if(H5Dclose(did) < 0)
+ goto error;
+ if(H5Fclose(fid) < 0)
+ goto error;
+ if(H5Pclose(dxpl_id) < 0)
+ goto error;
+ if(H5Sclose(sid) < 0)
+ goto error;
- return 0;
+ return SUCCEED;
error:
H5E_BEGIN_TRY {
- H5Pclose(plist);
- H5Gclose(groups);
- H5Dclose(dset);
- H5Fclose(file);
- H5Sclose(space);
+ H5Pclose(dxpl_id);
+ H5Gclose(top_level_gid);
+ H5Dclose(did);
+ H5Fclose(fid);
+ H5Sclose(sid);
+ H5Gclose(gid);
} H5E_END_TRY;
- return 1;
-}
+ return FAIL;
+} /* end check_test_file() */
/*-------------------------------------------------------------------------
- * Function: main
- *
- * Purpose: Part 2 of a two-part H5Fflush() test.
+ * Function: main
*
- * Return: Success: 0
+ * Purpose: Part 2 of a two-part H5Fflush() test.
*
- * Failure: 1
+ * Return: EXIT_SUCCESS/EXIT_FAIL
*
- * Programmer: Robb Matzke
+ * Programmer: Robb Matzke
* Friday, October 23, 1998
*
- * Modifications:
- * Leon Arber
- * Sept. 26, 2006, expand to check for case where the was file not flushed.
- *
*-------------------------------------------------------------------------
*/
int
-main(int argc, char* argv[])
+main(int argc, char *argv[])
{
- hid_t fapl1, fapl2;
+ hid_t fapl_id1 = H5I_INVALID_HID;
+ hid_t fapl_id2 = H5I_INVALID_HID;
H5E_auto2_t func;
-
- char name[1024];
+ char name[1024];
const char *envval = NULL;
- int mpi_size, mpi_rank;
+ int mpi_size;
+ int mpi_rank;
MPI_Comm comm = MPI_COMM_WORLD;
MPI_Info info = MPI_INFO_NULL;
@@ -149,72 +155,71 @@ main(int argc, char* argv[])
MPI_Comm_size(comm, &mpi_size);
MPI_Comm_rank(comm, &mpi_rank);
- fapl1 = H5Pcreate(H5P_FILE_ACCESS);
- H5Pset_fapl_mpio(fapl1, comm, info);
-
- fapl2 = H5Pcreate(H5P_FILE_ACCESS);
- H5Pset_fapl_mpio(fapl2, comm, info);
-
-
if(mpi_rank == 0)
- TESTING("H5Fflush (part2 with flush)");
+ TESTING("H5Fflush (part2 with flush)");
- /* Don't run this test using the core or split file drivers */
+ /* Don't run using the split VFD */
envval = HDgetenv("HDF5_DRIVER");
- if (envval == NULL)
+ if(envval == NULL)
envval = "nomatch";
- if (HDstrcmp(envval, "core") && HDstrcmp(envval, "split")) {
- /* Check the case where the file was flushed */
- h5_fixname(FILENAME[0], fapl1, name, sizeof name);
- if(check_file(name, fapl1))
- {
- H5_FAILED()
- goto error;
- }
- else if(mpi_rank == 0)
- {
- PASSED()
- }
-
- /* Check the case where the file was not flushed. This should give an error
- * so we turn off the error stack temporarily */
- if(mpi_rank == 0)
- TESTING("H5Fflush (part2 without flush)");
- H5Eget_auto2(H5E_DEFAULT,&func,NULL);
- H5Eset_auto2(H5E_DEFAULT, NULL, NULL);
-
- h5_fixname(FILENAME[1], fapl2, name, sizeof name);
- if(check_file(name, fapl2))
- {
- if(mpi_rank == 0)
- {
- PASSED()
- }
- }
- else
- {
- H5_FAILED()
- goto error;
- }
- H5Eset_auto2(H5E_DEFAULT, func, NULL);
-
-
- h5_clean_files(&FILENAME[0], fapl1);
- h5_clean_files(&FILENAME[1], fapl2);
+
+ if(!HDstrcmp(envval, "split")) {
+ if(mpi_rank == 0) {
+ SKIPPED();
+ HDputs(" Test not compatible with current Virtual File Driver");
+ }
+ MPI_Finalize();
+ HDexit(EXIT_FAILURE);
}
- else
- {
- SKIPPED();
- puts(" Test not compatible with current Virtual File Driver");
+
+ if((fapl_id1 = H5Pcreate(H5P_FILE_ACCESS)) < 0)
+ goto error;
+ if(H5Pset_fapl_mpio(fapl_id1, comm, info) < 0)
+ goto error;
+
+ if((fapl_id2 = H5Pcreate(H5P_FILE_ACCESS)) < 0)
+ goto error;
+ if(H5Pset_fapl_mpio(fapl_id2, comm, info) < 0)
+ goto error;
+
+ /* Check the case where the file was flushed */
+ h5_fixname(FILENAME[0], fapl_id1, name, sizeof(name));
+ if(check_test_file(name, fapl_id1)) {
+ H5_FAILED()
+ goto error;
+ }
+ else if(mpi_rank == 0) {
+ PASSED()
}
- MPI_Finalize();
- return 0;
+ /* Check the case where the file was not flushed. This should give an error
+ * so we turn off the error stack temporarily.
+ */
+ if(mpi_rank == 0)
+ TESTING("H5Fflush (part2 without flush)");
+ H5Eget_auto2(H5E_DEFAULT,&func, NULL);
+ H5Eset_auto2(H5E_DEFAULT, NULL, NULL);
+
+ h5_fixname(FILENAME[1], fapl_id2, name, sizeof(name));
+ if(check_test_file(name, fapl_id2)) {
+ if(mpi_rank == 0)
+ PASSED()
+ }
+ else {
+ H5_FAILED()
+ goto error;
+ }
+
+ H5Eset_auto2(H5E_DEFAULT, func, NULL);
- error:
- return 1;
-}
+ h5_clean_files(&FILENAME[0], fapl_id1);
+ h5_clean_files(&FILENAME[1], fapl_id2);
+ MPI_Finalize();
+ HDexit(EXIT_SUCCESS);
+error:
+ HDexit(EXIT_FAILURE);
+} /* end main() */
diff --git a/testpar/t_shapesame.c b/testpar/t_shapesame.c
index 4c139b3..caaf14c 100644
--- a/testpar/t_shapesame.c
+++ b/testpar/t_shapesame.c
@@ -12,7 +12,7 @@
/*
This program will test independant and collective reads and writes between
- selections of different rank that non-the-less are deemed as having the
+ selections of different rank that non-the-less are deemed as having the
same shape by H5Sselect_shape_same().
*/
@@ -31,24 +31,24 @@
/* On Lustre (and perhaps other parallel file systems?), we have severe
* slow downs if two or more processes attempt to access the same file system
* block. To minimize this problem, we set alignment in the shape same tests
- * to the default Lustre block size -- which greatly reduces contention in
+ * to the default Lustre block size -- which greatly reduces contention in
* the chunked dataset case.
*/
-#define SHAPE_SAME_TEST_ALIGNMENT ((hsize_t)(4 * 1024 * 1024))
+#define SHAPE_SAME_TEST_ALIGNMENT ((hsize_t)(4 * 1024 * 1024))
-#define PAR_SS_DR_MAX_RANK 5 /* must update code if this changes */
+#define PAR_SS_DR_MAX_RANK 5 /* must update code if this changes */
struct hs_dr_pio_test_vars_t
{
- int mpi_size;
+ int mpi_size;
int mpi_rank;
MPI_Comm mpi_comm;
- MPI_Info mpi_info;
+ MPI_Info mpi_info;
int test_num;
int edge_size;
- int checker_edge_size;
+ int checker_edge_size;
int chunk_edge_size;
int small_rank;
int large_rank;
@@ -64,13 +64,13 @@ struct hs_dr_pio_test_vars_t
int small_ds_offset;
int large_ds_offset;
hid_t fid; /* HDF5 file ID */
- hid_t xfer_plist;
+ hid_t xfer_plist;
hid_t full_mem_small_ds_sid;
hid_t full_file_small_ds_sid;
hid_t mem_small_ds_sid;
hid_t file_small_ds_sid_0;
hid_t file_small_ds_sid_1;
- hid_t small_ds_slice_sid;
+ hid_t small_ds_slice_sid;
hid_t full_mem_large_ds_sid;
hid_t full_file_large_ds_sid;
hid_t mem_large_ds_sid;
@@ -78,7 +78,7 @@ struct hs_dr_pio_test_vars_t
hid_t file_large_ds_sid_1;
hid_t file_large_ds_process_slice_sid;
hid_t mem_large_ds_process_slice_sid;
- hid_t large_ds_slice_sid;
+ hid_t large_ds_slice_sid;
hid_t small_dataset; /* Dataset ID */
hid_t large_dataset; /* Dataset ID */
size_t small_ds_size;
@@ -96,25 +96,21 @@ struct hs_dr_pio_test_vars_t
hsize_t * count_ptr;
hsize_t * block_ptr;
int skips;
- int max_skips;
- int64_t total_tests;
- int64_t tests_run;
- int64_t tests_skipped;
+ int max_skips;
+ int64_t total_tests;
+ int64_t tests_run;
+ int64_t tests_skipped;
};
/*-------------------------------------------------------------------------
- * Function: hs_dr_pio_test__setup()
+ * Function: hs_dr_pio_test__setup()
*
- * Purpose: Do setup for tests of I/O to/from hyperslab selections of
- * different rank in the parallel case.
+ * Purpose: Do setup for tests of I/O to/from hyperslab selections of
+ * different rank in the parallel case.
*
- * Return: void
+ * Return: void
*
- * Programmer: JRM -- 8/9/11
- *
- * Modifications:
- *
- * None.
+ * Programmer: JRM -- 8/9/11
*
*-------------------------------------------------------------------------
*/
@@ -133,21 +129,21 @@ hs_dr_pio_test__setup(const int test_num,
const int express_test,
struct hs_dr_pio_test_vars_t * tv_ptr)
{
-#if CONTIG_HS_DR_PIO_TEST__SETUP__DEBUG
+#if CONTIG_HS_DR_PIO_TEST__SETUP__DEBUG
const char *fcnName = "hs_dr_pio_test__setup()";
#endif /* CONTIG_HS_DR_PIO_TEST__SETUP__DEBUG */
const char *filename;
- hbool_t mis_match = FALSE;
- int i;
+ hbool_t mis_match = FALSE;
+ int i;
int mrc;
- int mpi_rank; /* needed by the VRFY macro */
- uint32_t expected_value;
+ int mpi_rank; /* needed by the VRFY macro */
+ uint32_t expected_value;
uint32_t * ptr_0;
uint32_t * ptr_1;
- hid_t acc_tpl; /* File access templates */
+ hid_t acc_tpl; /* File access templates */
hid_t small_ds_dcpl_id = H5P_DEFAULT;
hid_t large_ds_dcpl_id = H5P_DEFAULT;
- herr_t ret; /* Generic return value */
+ herr_t ret; /* Generic return value */
HDassert( edge_size >= 6 );
HDassert( edge_size >= chunk_edge_size );
@@ -219,7 +215,7 @@ hs_dr_pio_test__setup(const int test_num,
tv_ptr->small_ds_buf_2 = (uint32_t *)HDmalloc(sizeof(uint32_t) * tv_ptr->small_ds_size);
VRFY((tv_ptr->small_ds_buf_2 != NULL), "malloc of small_ds_buf_2 succeeded");
- tv_ptr->small_ds_slice_buf =
+ tv_ptr->small_ds_slice_buf =
(uint32_t *)HDmalloc(sizeof(uint32_t) * tv_ptr->small_ds_slice_size);
VRFY((tv_ptr->small_ds_slice_buf != NULL), "malloc of small_ds_slice_buf succeeded");
@@ -232,7 +228,7 @@ hs_dr_pio_test__setup(const int test_num,
tv_ptr->large_ds_buf_2 = (uint32_t *)HDmalloc(sizeof(uint32_t) * tv_ptr->large_ds_size);
VRFY((tv_ptr->large_ds_buf_2 != NULL), "malloc of large_ds_buf_2 succeeded");
- tv_ptr->large_ds_slice_buf =
+ tv_ptr->large_ds_slice_buf =
(uint32_t *)HDmalloc(sizeof(uint32_t) * tv_ptr->large_ds_slice_size);
VRFY((tv_ptr->large_ds_slice_buf != NULL), "malloc of large_ds_slice_buf succeeded");
@@ -256,21 +252,21 @@ hs_dr_pio_test__setup(const int test_num,
filename = (const char *)GetTestParameters();
HDassert( filename != NULL );
-#if CONTIG_HS_DR_PIO_TEST__SETUP__DEBUG
+#if CONTIG_HS_DR_PIO_TEST__SETUP__DEBUG
if ( MAINPROCESS ) {
HDfprintf(stdout, "%d: test num = %d.\n", tv_ptr->mpi_rank, tv_ptr->test_num);
HDfprintf(stdout, "%d: mpi_size = %d.\n", tv_ptr->mpi_rank, tv_ptr->mpi_size);
- HDfprintf(stdout,
+ HDfprintf(stdout,
"%d: small/large rank = %d/%d, use_collective_io = %d.\n",
- tv_ptr->mpi_rank, tv_ptr->small_rank, tv_ptr->large_rank,
+ tv_ptr->mpi_rank, tv_ptr->small_rank, tv_ptr->large_rank,
(int)use_collective_io);
HDfprintf(stdout, "%d: edge_size = %d, chunk_edge_size = %d.\n",
tv_ptr->mpi_rank, tv_ptr->edge_size, tv_ptr->chunk_edge_size);
HDfprintf(stdout, "%d: checker_edge_size = %d.\n",
tv_ptr->mpi_rank, tv_ptr->checker_edge_size);
HDfprintf(stdout, "%d: small_ds_size = %d, large_ds_size = %d.\n",
- tv_ptr->mpi_rank, (int)(tv_ptr->small_ds_size),
+ tv_ptr->mpi_rank, (int)(tv_ptr->small_ds_size),
(int)(tv_ptr->large_ds_size));
HDfprintf(stdout, "%d: filename = %s.\n", tv_ptr->mpi_rank, filename);
}
@@ -305,78 +301,78 @@ hs_dr_pio_test__setup(const int test_num,
/* setup dims: */
tv_ptr->dims[0] = (hsize_t)(tv_ptr->mpi_size + 1);
- tv_ptr->dims[1] = tv_ptr->dims[2] =
+ tv_ptr->dims[1] = tv_ptr->dims[2] =
tv_ptr->dims[3] = tv_ptr->dims[4] = (hsize_t)(tv_ptr->edge_size);
/* Create small ds dataspaces */
- tv_ptr->full_mem_small_ds_sid =
+ tv_ptr->full_mem_small_ds_sid =
H5Screate_simple(tv_ptr->small_rank, tv_ptr->dims, NULL);
- VRFY((tv_ptr->full_mem_small_ds_sid != 0),
+ VRFY((tv_ptr->full_mem_small_ds_sid != 0),
"H5Screate_simple() full_mem_small_ds_sid succeeded");
- tv_ptr->full_file_small_ds_sid =
+ tv_ptr->full_file_small_ds_sid =
H5Screate_simple(tv_ptr->small_rank, tv_ptr->dims, NULL);
- VRFY((tv_ptr->full_file_small_ds_sid != 0),
+ VRFY((tv_ptr->full_file_small_ds_sid != 0),
"H5Screate_simple() full_file_small_ds_sid succeeded");
tv_ptr->mem_small_ds_sid = H5Screate_simple(tv_ptr->small_rank, tv_ptr->dims, NULL);
- VRFY((tv_ptr->mem_small_ds_sid != 0),
+ VRFY((tv_ptr->mem_small_ds_sid != 0),
"H5Screate_simple() mem_small_ds_sid succeeded");
tv_ptr->file_small_ds_sid_0 = H5Screate_simple(tv_ptr->small_rank, tv_ptr->dims, NULL);
- VRFY((tv_ptr->file_small_ds_sid_0 != 0),
+ VRFY((tv_ptr->file_small_ds_sid_0 != 0),
"H5Screate_simple() file_small_ds_sid_0 succeeded");
/* used by checker board tests only */
tv_ptr->file_small_ds_sid_1 = H5Screate_simple(tv_ptr->small_rank, tv_ptr->dims, NULL);
- VRFY((tv_ptr->file_small_ds_sid_1 != 0),
+ VRFY((tv_ptr->file_small_ds_sid_1 != 0),
"H5Screate_simple() file_small_ds_sid_1 succeeded");
- tv_ptr->small_ds_slice_sid =
+ tv_ptr->small_ds_slice_sid =
H5Screate_simple(tv_ptr->small_rank - 1, &(tv_ptr->dims[1]), NULL);
- VRFY((tv_ptr->small_ds_slice_sid != 0),
+ VRFY((tv_ptr->small_ds_slice_sid != 0),
"H5Screate_simple() small_ds_slice_sid succeeded");
/* Create large ds dataspaces */
- tv_ptr->full_mem_large_ds_sid =
+ tv_ptr->full_mem_large_ds_sid =
H5Screate_simple(tv_ptr->large_rank, tv_ptr->dims, NULL);
- VRFY((tv_ptr->full_mem_large_ds_sid != 0),
+ VRFY((tv_ptr->full_mem_large_ds_sid != 0),
"H5Screate_simple() full_mem_large_ds_sid succeeded");
- tv_ptr->full_file_large_ds_sid =
+ tv_ptr->full_file_large_ds_sid =
H5Screate_simple(tv_ptr->large_rank, tv_ptr->dims, NULL);
- VRFY((tv_ptr->full_file_large_ds_sid != FAIL),
+ VRFY((tv_ptr->full_file_large_ds_sid != FAIL),
"H5Screate_simple() full_file_large_ds_sid succeeded");
tv_ptr->mem_large_ds_sid = H5Screate_simple(tv_ptr->large_rank, tv_ptr->dims, NULL);
- VRFY((tv_ptr->mem_large_ds_sid != FAIL),
+ VRFY((tv_ptr->mem_large_ds_sid != FAIL),
"H5Screate_simple() mem_large_ds_sid succeeded");
tv_ptr->file_large_ds_sid_0 = H5Screate_simple(tv_ptr->large_rank, tv_ptr->dims, NULL);
- VRFY((tv_ptr->file_large_ds_sid_0 != FAIL),
+ VRFY((tv_ptr->file_large_ds_sid_0 != FAIL),
"H5Screate_simple() file_large_ds_sid_0 succeeded");
/* used by checker board tests only */
tv_ptr->file_large_ds_sid_1 = H5Screate_simple(tv_ptr->large_rank, tv_ptr->dims, NULL);
- VRFY((tv_ptr->file_large_ds_sid_1 != FAIL),
+ VRFY((tv_ptr->file_large_ds_sid_1 != FAIL),
"H5Screate_simple() file_large_ds_sid_1 succeeded");
- tv_ptr->mem_large_ds_process_slice_sid =
+ tv_ptr->mem_large_ds_process_slice_sid =
H5Screate_simple(tv_ptr->large_rank, tv_ptr->dims, NULL);
- VRFY((tv_ptr->mem_large_ds_process_slice_sid != FAIL),
+ VRFY((tv_ptr->mem_large_ds_process_slice_sid != FAIL),
"H5Screate_simple() mem_large_ds_process_slice_sid succeeded");
- tv_ptr->file_large_ds_process_slice_sid =
+ tv_ptr->file_large_ds_process_slice_sid =
H5Screate_simple(tv_ptr->large_rank, tv_ptr->dims, NULL);
- VRFY((tv_ptr->file_large_ds_process_slice_sid != FAIL),
+ VRFY((tv_ptr->file_large_ds_process_slice_sid != FAIL),
"H5Screate_simple() file_large_ds_process_slice_sid succeeded");
- tv_ptr->large_ds_slice_sid =
+ tv_ptr->large_ds_slice_sid =
H5Screate_simple(tv_ptr->large_rank - 1, &(tv_ptr->dims[1]), NULL);
- VRFY((tv_ptr->large_ds_slice_sid != 0),
+ VRFY((tv_ptr->large_ds_slice_sid != 0),
"H5Screate_simple() large_ds_slice_sid succeeded");
@@ -386,18 +382,18 @@ hs_dr_pio_test__setup(const int test_num,
*/
if ( tv_ptr->chunk_edge_size > 0 ) {
- /* Under Lustre (and perhaps other parallel file systems?) we get
- * locking delays when two or more processes attempt to access the
+ /* Under Lustre (and perhaps other parallel file systems?) we get
+ * locking delays when two or more processes attempt to access the
* same file system block.
*
- * To minimize this problem, I have changed chunk_dims[0]
+ * To minimize this problem, I have changed chunk_dims[0]
* from (mpi_size + 1) to just when any sort of express test is
- * selected. Given the structure of the test, and assuming we
- * set the alignment large enough, this avoids the contention
- * issue by seeing to it that each chunk is only accessed by one
+ * selected. Given the structure of the test, and assuming we
+ * set the alignment large enough, this avoids the contention
+ * issue by seeing to it that each chunk is only accessed by one
* process.
*
- * One can argue as to whether this is a good thing to do in our
+ * One can argue as to whether this is a good thing to do in our
* tests, but for now it is necessary if we want the test to complete
* in a reasonable amount of time.
*
@@ -411,8 +407,8 @@ hs_dr_pio_test__setup(const int test_num,
tv_ptr->chunk_dims[0] = 1;
}
- tv_ptr->chunk_dims[1] = tv_ptr->chunk_dims[2] =
- tv_ptr->chunk_dims[3] =
+ tv_ptr->chunk_dims[1] = tv_ptr->chunk_dims[2] =
+ tv_ptr->chunk_dims[3] =
tv_ptr->chunk_dims[4] = (hsize_t)(tv_ptr->chunk_edge_size);
small_ds_dcpl_id = H5Pcreate(H5P_DATASET_CREATE);
@@ -511,7 +507,7 @@ hs_dr_pio_test__setup(const int test_num,
/* write the initial value of the small data set to file */
- ret = H5Dwrite(tv_ptr->small_dataset, tv_ptr->dset_type, tv_ptr->mem_small_ds_sid,
+ ret = H5Dwrite(tv_ptr->small_dataset, tv_ptr->dset_type, tv_ptr->mem_small_ds_sid,
tv_ptr->file_small_ds_sid_0, tv_ptr->xfer_plist, tv_ptr->small_ds_buf_0);
VRFY((ret >= 0), "H5Dwrite() small_dataset initial write succeeded");
@@ -524,8 +520,8 @@ hs_dr_pio_test__setup(const int test_num,
VRFY((mrc==MPI_SUCCESS), "Sync after small dataset writes");
}
- /* read the small data set back to verify that it contains the
- * expected data. Note that each process reads in the entire
+ /* read the small data set back to verify that it contains the
+ * expected data. Note that each process reads in the entire
* data set and verifies it.
*/
ret = H5Dread(tv_ptr->small_dataset,
@@ -574,8 +570,8 @@ hs_dr_pio_test__setup(const int test_num,
tv_ptr->count,
tv_ptr->block);
VRFY((ret >= 0), "H5Sselect_hyperslab(file_large_ds_sid_0, set) suceeded");
-
- /* In passing, setup the process slice data spaces as well */
+
+ /* In passing, setup the process slice dataspaces as well */
ret = H5Sselect_hyperslab(tv_ptr->mem_large_ds_process_slice_sid,
H5S_SELECT_SET,
@@ -583,7 +579,7 @@ hs_dr_pio_test__setup(const int test_num,
tv_ptr->stride,
tv_ptr->count,
tv_ptr->block);
- VRFY((ret >= 0),
+ VRFY((ret >= 0),
"H5Sselect_hyperslab(mem_large_ds_process_slice_sid, set) suceeded");
ret = H5Sselect_hyperslab(tv_ptr->file_large_ds_process_slice_sid,
@@ -592,7 +588,7 @@ hs_dr_pio_test__setup(const int test_num,
tv_ptr->stride,
tv_ptr->count,
tv_ptr->block);
- VRFY((ret >= 0),
+ VRFY((ret >= 0),
"H5Sselect_hyperslab(file_large_ds_process_slice_sid, set) suceeded");
if ( MAINPROCESS ) { /* add an additional slice to the selections */
@@ -618,8 +614,8 @@ hs_dr_pio_test__setup(const int test_num,
/* write the initial value of the large data set to file */
- ret = H5Dwrite(tv_ptr->large_dataset, tv_ptr->dset_type,
- tv_ptr->mem_large_ds_sid, tv_ptr->file_large_ds_sid_0,
+ ret = H5Dwrite(tv_ptr->large_dataset, tv_ptr->dset_type,
+ tv_ptr->mem_large_ds_sid, tv_ptr->file_large_ds_sid_0,
tv_ptr->xfer_plist, tv_ptr->large_ds_buf_0);
if ( ret < 0 ) H5Eprint2(H5E_DEFAULT, stderr);
VRFY((ret >= 0), "H5Dwrite() large_dataset initial write succeeded");
@@ -633,8 +629,8 @@ hs_dr_pio_test__setup(const int test_num,
}
- /* read the large data set back to verify that it contains the
- * expected data. Note that each process reads in the entire
+ /* read the large data set back to verify that it contains the
+ * expected data. Note that each process reads in the entire
* data set.
*/
ret = H5Dread(tv_ptr->large_dataset,
@@ -678,18 +674,14 @@ hs_dr_pio_test__setup(const int test_num,
/*-------------------------------------------------------------------------
- * Function: hs_dr_pio_test__takedown()
+ * Function: hs_dr_pio_test__takedown()
*
- * Purpose: Do takedown after tests of I/O to/from hyperslab selections
- * of different rank in the parallel case.
+ * Purpose: Do takedown after tests of I/O to/from hyperslab selections
+ * of different rank in the parallel case.
*
- * Return: void
- *
- * Programmer: JRM -- 9/18/09
- *
- * Modifications:
+ * Return: void
*
- * None.
+ * Programmer: JRM -- 9/18/09
*
*-------------------------------------------------------------------------
*/
@@ -699,11 +691,11 @@ hs_dr_pio_test__setup(const int test_num,
static void
hs_dr_pio_test__takedown( struct hs_dr_pio_test_vars_t * tv_ptr)
{
-#if HS_DR_PIO_TEST__TAKEDOWN__DEBUG
+#if HS_DR_PIO_TEST__TAKEDOWN__DEBUG
const char *fcnName = "hs_dr_pio_test__takedown()";
#endif /* HS_DR_PIO_TEST__TAKEDOWN__DEBUG */
- int mpi_rank; /* needed by the VRFY macro */
- herr_t ret; /* Generic return value */
+ int mpi_rank; /* needed by the VRFY macro */
+ herr_t ret; /* Generic return value */
/* initialize the local copy of mpi_rank */
mpi_rank = tv_ptr->mpi_rank;
@@ -787,27 +779,23 @@ hs_dr_pio_test__takedown( struct hs_dr_pio_test_vars_t * tv_ptr)
/*-------------------------------------------------------------------------
- * Function: contig_hs_dr_pio_test__d2m_l2s()
+ * Function: contig_hs_dr_pio_test__d2m_l2s()
*
- * Purpose: Part one of a series of tests of I/O to/from hyperslab
- * selections of different rank in the parallel.
+ * Purpose: Part one of a series of tests of I/O to/from hyperslab
+ * selections of different rank in the parallel.
*
- * Verify that we can read from disk correctly using
- * selections of different rank that H5S_select_shape_same()
- * views as being of the same shape.
+ * Verify that we can read from disk correctly using
+ * selections of different rank that H5S_select_shape_same()
+ * views as being of the same shape.
*
- * In this function, we test this by reading small_rank - 1
- * slices from the on disk large cube, and verifying that the
- * data read is correct. Verify that H5S_select_shape_same()
- * returns true on the memory and file selections.
+ * In this function, we test this by reading small_rank - 1
+ * slices from the on disk large cube, and verifying that the
+ * data read is correct. Verify that H5S_select_shape_same()
+ * returns true on the memory and file selections.
*
- * Return: void
+ * Return: void
*
- * Programmer: JRM -- 9/10/11
- *
- * Modifications:
- *
- * None.
+ * Programmer: JRM -- 9/10/11
*
*-------------------------------------------------------------------------
*/
@@ -817,24 +805,24 @@ hs_dr_pio_test__takedown( struct hs_dr_pio_test_vars_t * tv_ptr)
static void
contig_hs_dr_pio_test__d2m_l2s(struct hs_dr_pio_test_vars_t * tv_ptr)
{
-#if CONTIG_HS_DR_PIO_TEST__D2M_L2S__DEBUG
+#if CONTIG_HS_DR_PIO_TEST__D2M_L2S__DEBUG
const char *fcnName = "contig_hs_dr_pio_test__run_test()";
#endif /* CONTIG_HS_DR_PIO_TEST__D2M_L2S__DEBUG */
- hbool_t mis_match = FALSE;
- int i, j, k, l;
- size_t n;
- int mpi_rank; /* needed by the VRFY macro */
- uint32_t expected_value;
+ hbool_t mis_match = FALSE;
+ int i, j, k, l;
+ size_t n;
+ int mpi_rank; /* needed by the VRFY macro */
+ uint32_t expected_value;
uint32_t * ptr_1;
htri_t check; /* Shape comparison return value */
- herr_t ret; /* Generic return value */
+ herr_t ret; /* Generic return value */
/* initialize the local copy of mpi_rank */
mpi_rank = tv_ptr->mpi_rank;
- /* We have already done a H5Sselect_all() on the data space
- * small_ds_slice_sid in the initialization phase, so no need to
+ /* We have already done a H5Sselect_all() on the dataspace
+ * small_ds_slice_sid in the initialization phase, so no need to
* call H5Sselect_all() again.
*/
@@ -859,16 +847,16 @@ contig_hs_dr_pio_test__d2m_l2s(struct hs_dr_pio_test_vars_t * tv_ptr)
/* zero out the buffer we will be reading into */
HDmemset(tv_ptr->small_ds_slice_buf, 0, sizeof(uint32_t) * tv_ptr->small_ds_slice_size);
-#if CONTIG_HS_DR_PIO_TEST__D2M_L2S__DEBUG
- HDfprintf(stdout,
+#if CONTIG_HS_DR_PIO_TEST__D2M_L2S__DEBUG
+ HDfprintf(stdout,
"%s reading slices from big cube on disk into small cube slice.\n",
fcnName);
#endif /* CONTIG_HS_DR_PIO_TEST__D2M_L2S__DEBUG */
/* in serial versions of this test, we loop through all the dimensions
- * of the large data set. However, in the parallel version, each
+ * of the large data set. However, in the parallel version, each
* process only works with that slice of the large cube indicated
- * by its rank -- hence we set the most slowly changing index to
+ * by its rank -- hence we set the most slowly changing index to
* mpi_rank, and don't itterate over it.
*/
@@ -881,9 +869,9 @@ contig_hs_dr_pio_test__d2m_l2s(struct hs_dr_pio_test_vars_t * tv_ptr)
i = 0;
}
- /* since large_rank is at most PAR_SS_DR_MAX_RANK, no need to
+ /* since large_rank is at most PAR_SS_DR_MAX_RANK, no need to
* loop over it -- either we are setting i to mpi_rank, or
- * we are setting it to zero. It will not change during the
+ * we are setting it to zero. It will not change during the
* test.
*/
@@ -907,7 +895,7 @@ contig_hs_dr_pio_test__d2m_l2s(struct hs_dr_pio_test_vars_t * tv_ptr)
}
do {
- /* since small rank >= 2 and large_rank > small_rank, we
+ /* since small rank >= 2 and large_rank > small_rank, we
* have large_rank >= 3. Since PAR_SS_DR_MAX_RANK == 5
* (baring major re-orgaization), this gives us:
*
@@ -921,14 +909,14 @@ contig_hs_dr_pio_test__d2m_l2s(struct hs_dr_pio_test_vars_t * tv_ptr)
do {
if ( (tv_ptr->skips)++ < tv_ptr->max_skips ) { /* skip the test */
- (tv_ptr->tests_skipped)++;
+ (tv_ptr->tests_skipped)++;
} else { /* run the test */
tv_ptr->skips = 0; /* reset the skips counter */
- /* we know that small_rank - 1 >= 1 and that
- * large_rank > small_rank by the assertions at the head
+ /* we know that small_rank - 1 >= 1 and that
+ * large_rank > small_rank by the assertions at the head
* of this function. Thus no need for another inner loop.
*/
tv_ptr->start[0] = (hsize_t)i;
@@ -943,7 +931,7 @@ contig_hs_dr_pio_test__d2m_l2s(struct hs_dr_pio_test_vars_t * tv_ptr)
tv_ptr->stride_ptr,
tv_ptr->count_ptr,
tv_ptr->block_ptr);
- VRFY((ret != FAIL),
+ VRFY((ret != FAIL),
"H5Sselect_hyperslab(file_large_cube_sid) succeeded");
@@ -956,11 +944,11 @@ contig_hs_dr_pio_test__d2m_l2s(struct hs_dr_pio_test_vars_t * tv_ptr)
/* Read selection from disk */
-#if CONTIG_HS_DR_PIO_TEST__D2M_L2S__DEBUG
- HDfprintf(stdout, "%s:%d: start = %d %d %d %d %d.\n",
- fcnName, (int)(tv_ptr->mpi_rank),
- (int)(tv_ptr->start[0]), (int)(tv_ptr->start[1]),
- (int)(tv_ptr->start[2]), (int)(tv_ptr->start[3]),
+#if CONTIG_HS_DR_PIO_TEST__D2M_L2S__DEBUG
+ HDfprintf(stdout, "%s:%d: start = %d %d %d %d %d.\n",
+ fcnName, (int)(tv_ptr->mpi_rank),
+ (int)(tv_ptr->start[0]), (int)(tv_ptr->start[1]),
+ (int)(tv_ptr->start[2]), (int)(tv_ptr->start[3]),
(int)(tv_ptr->start[4]));
HDfprintf(stdout, "%s slice/file extent dims = %d/%d.\n",
fcnName,
@@ -981,7 +969,7 @@ contig_hs_dr_pio_test__d2m_l2s(struct hs_dr_pio_test_vars_t * tv_ptr)
mis_match = FALSE;
ptr_1 = tv_ptr->small_ds_slice_buf;
expected_value = (uint32_t)(
- (i * tv_ptr->edge_size * tv_ptr->edge_size *
+ (i * tv_ptr->edge_size * tv_ptr->edge_size *
tv_ptr->edge_size * tv_ptr->edge_size) +
(j * tv_ptr->edge_size * tv_ptr->edge_size * tv_ptr->edge_size) +
(k * tv_ptr->edge_size * tv_ptr->edge_size) +
@@ -1000,10 +988,10 @@ contig_hs_dr_pio_test__d2m_l2s(struct hs_dr_pio_test_vars_t * tv_ptr)
expected_value++;
}
- VRFY((mis_match == FALSE),
+ VRFY((mis_match == FALSE),
"small slice read from large ds data good.");
- (tv_ptr->tests_run)++;
+ (tv_ptr->tests_run)++;
}
l++;
@@ -1028,27 +1016,23 @@ contig_hs_dr_pio_test__d2m_l2s(struct hs_dr_pio_test_vars_t * tv_ptr)
/*-------------------------------------------------------------------------
- * Function: contig_hs_dr_pio_test__d2m_s2l()
- *
- * Purpose: Part two of a series of tests of I/O to/from hyperslab
- * selections of different rank in the parallel.
- *
- * Verify that we can read from disk correctly using
- * selections of different rank that H5S_select_shape_same()
- * views as being of the same shape.
+ * Function: contig_hs_dr_pio_test__d2m_s2l()
*
- * In this function, we test this by reading slices of the
- * on disk small data set into slices through the in memory
- * large data set, and verify that the correct data (and
- * only the correct data) is read.
+ * Purpose: Part two of a series of tests of I/O to/from hyperslab
+ * selections of different rank in the parallel.
*
- * Return: void
+ * Verify that we can read from disk correctly using
+ * selections of different rank that H5S_select_shape_same()
+ * views as being of the same shape.
*
- * Programmer: JRM -- 8/10/11
+ * In this function, we test this by reading slices of the
+ * on disk small data set into slices through the in memory
+ * large data set, and verify that the correct data (and
+ * only the correct data) is read.
*
- * Modifications:
+ * Return: void
*
- * None.
+ * Programmer: JRM -- 8/10/11
*
*-------------------------------------------------------------------------
*/
@@ -1058,25 +1042,25 @@ contig_hs_dr_pio_test__d2m_l2s(struct hs_dr_pio_test_vars_t * tv_ptr)
static void
contig_hs_dr_pio_test__d2m_s2l(struct hs_dr_pio_test_vars_t * tv_ptr)
{
-#if CONTIG_HS_DR_PIO_TEST__D2M_S2L__DEBUG
+#if CONTIG_HS_DR_PIO_TEST__D2M_S2L__DEBUG
const char *fcnName = "contig_hs_dr_pio_test__d2m_s2l()";
#endif /* CONTIG_HS_DR_PIO_TEST__D2M_S2L__DEBUG */
- hbool_t mis_match = FALSE;
- int i, j, k, l;
- size_t n;
- int mpi_rank; /* needed by the VRFY macro */
+ hbool_t mis_match = FALSE;
+ int i, j, k, l;
+ size_t n;
+ int mpi_rank; /* needed by the VRFY macro */
size_t start_index;
size_t stop_index;
- uint32_t expected_value;
+ uint32_t expected_value;
uint32_t * ptr_1;
htri_t check; /* Shape comparison return value */
- herr_t ret; /* Generic return value */
+ herr_t ret; /* Generic return value */
/* initialize the local copy of mpi_rank */
mpi_rank = tv_ptr->mpi_rank;
- /* Read slices of the on disk small data set into slices
- * through the in memory large data set, and verify that the correct
+ /* Read slices of the on disk small data set into slices
+ * through the in memory large data set, and verify that the correct
* data (and only the correct data) is read.
*/
@@ -1102,8 +1086,8 @@ contig_hs_dr_pio_test__d2m_s2l(struct hs_dr_pio_test_vars_t * tv_ptr)
VRFY((ret >= 0), "H5Sselect_hyperslab(file_small_ds_sid_0, set) suceeded");
-#if CONTIG_HS_DR_PIO_TEST__D2M_S2L__DEBUG
- HDfprintf(stdout,
+#if CONTIG_HS_DR_PIO_TEST__D2M_S2L__DEBUG
+ HDfprintf(stdout,
"%s reading slices of on disk small data set into slices of big data set.\n",
fcnName);
#endif /* CONTIG_HS_DR_PIO_TEST__D2M_S2L__DEBUG */
@@ -1131,11 +1115,11 @@ contig_hs_dr_pio_test__d2m_s2l(struct hs_dr_pio_test_vars_t * tv_ptr)
/* in serial versions of this test, we loop through all the dimensions
- * of the large data set that don't appear in the small data set.
+ * of the large data set that don't appear in the small data set.
*
- * However, in the parallel version, each process only works with that
- * slice of the large (and small) data set indicated by its rank -- hence
- * we set the most slowly changing index to mpi_rank, and don't itterate
+ * However, in the parallel version, each process only works with that
+ * slice of the large (and small) data set indicated by its rank -- hence
+ * we set the most slowly changing index to mpi_rank, and don't itterate
* over it.
*/
@@ -1149,9 +1133,9 @@ contig_hs_dr_pio_test__d2m_s2l(struct hs_dr_pio_test_vars_t * tv_ptr)
i = 0;
}
- /* since large_rank is at most PAR_SS_DR_MAX_RANK, no need to
+ /* since large_rank is at most PAR_SS_DR_MAX_RANK, no need to
* loop over it -- either we are setting i to mpi_rank, or
- * we are setting it to zero. It will not change during the
+ * we are setting it to zero. It will not change during the
* test.
*/
@@ -1175,7 +1159,7 @@ contig_hs_dr_pio_test__d2m_s2l(struct hs_dr_pio_test_vars_t * tv_ptr)
}
do {
- /* since small rank >= 2 and large_rank > small_rank, we
+ /* since small rank >= 2 and large_rank > small_rank, we
* have large_rank >= 3. Since PAR_SS_DR_MAX_RANK == 5
* (baring major re-orgaization), this gives us:
*
@@ -1211,7 +1195,7 @@ contig_hs_dr_pio_test__d2m_s2l(struct hs_dr_pio_test_vars_t * tv_ptr)
tv_ptr->stride_ptr,
tv_ptr->count_ptr,
tv_ptr->block_ptr);
- VRFY((ret != FAIL),
+ VRFY((ret != FAIL),
"H5Sselect_hyperslab(mem_large_ds_sid) succeeded");
@@ -1224,11 +1208,11 @@ contig_hs_dr_pio_test__d2m_s2l(struct hs_dr_pio_test_vars_t * tv_ptr)
/* Read selection from disk */
-#if CONTIG_HS_DR_PIO_TEST__D2M_S2L__DEBUG
- HDfprintf(stdout, "%s:%d: start = %d %d %d %d %d.\n",
- fcnName, (int)(tv_ptr->mpi_rank),
- (int)(tv_ptr->start[0]), (int)(tv_ptr->start[1]),
- (int)(tv_ptr->start[2]), (int)(tv_ptr->start[3]),
+#if CONTIG_HS_DR_PIO_TEST__D2M_S2L__DEBUG
+ HDfprintf(stdout, "%s:%d: start = %d %d %d %d %d.\n",
+ fcnName, (int)(tv_ptr->mpi_rank),
+ (int)(tv_ptr->start[0]), (int)(tv_ptr->start[1]),
+ (int)(tv_ptr->start[2]), (int)(tv_ptr->start[3]),
(int)(tv_ptr->start[4]));
HDfprintf(stdout, "%s:%d: mem/file extent dims = %d/%d.\n",
fcnName, tv_ptr->mpi_rank,
@@ -1250,7 +1234,7 @@ contig_hs_dr_pio_test__d2m_s2l(struct hs_dr_pio_test_vars_t * tv_ptr)
expected_value = (uint32_t)
((size_t)(tv_ptr->mpi_rank) * tv_ptr->small_ds_slice_size);
start_index = (size_t)(
- (i * tv_ptr->edge_size * tv_ptr->edge_size *
+ (i * tv_ptr->edge_size * tv_ptr->edge_size *
tv_ptr->edge_size * tv_ptr->edge_size) +
(j * tv_ptr->edge_size * tv_ptr->edge_size * tv_ptr->edge_size) +
(k * tv_ptr->edge_size * tv_ptr->edge_size) +
@@ -1283,7 +1267,7 @@ contig_hs_dr_pio_test__d2m_s2l(struct hs_dr_pio_test_vars_t * tv_ptr)
ptr_1++;
}
- VRFY((mis_match == FALSE),
+ VRFY((mis_match == FALSE),
"small slice read from large ds data good.");
(tv_ptr->tests_run)++;
@@ -1311,29 +1295,25 @@ contig_hs_dr_pio_test__d2m_s2l(struct hs_dr_pio_test_vars_t * tv_ptr)
/*-------------------------------------------------------------------------
- * Function: contig_hs_dr_pio_test__m2d_l2s()
+ * Function: contig_hs_dr_pio_test__m2d_l2s()
*
- * Purpose: Part three of a series of tests of I/O to/from hyperslab
- * selections of different rank in the parallel.
+ * Purpose: Part three of a series of tests of I/O to/from hyperslab
+ * selections of different rank in the parallel.
*
- * Verify that we can write from memory to file using
- * selections of different rank that H5S_select_shape_same()
- * views as being of the same shape.
+ * Verify that we can write from memory to file using
+ * selections of different rank that H5S_select_shape_same()
+ * views as being of the same shape.
*
- * Do this by writing small_rank - 1 dimensional slices from
- * the in memory large data set to the on disk small cube
- * dataset. After each write, read the slice of the small
- * dataset back from disk, and verify that it contains
- * the expected data. Verify that H5S_select_shape_same()
- * returns true on the memory and file selections.
+ * Do this by writing small_rank - 1 dimensional slices from
+ * the in memory large data set to the on disk small cube
+ * dataset. After each write, read the slice of the small
+ * dataset back from disk, and verify that it contains
+ * the expected data. Verify that H5S_select_shape_same()
+ * returns true on the memory and file selections.
*
- * Return: void
+ * Return: void
*
- * Programmer: JRM -- 8/10/11
- *
- * Modifications:
- *
- * None.
+ * Programmer: JRM -- 8/10/11
*
*-------------------------------------------------------------------------
*/
@@ -1343,19 +1323,19 @@ contig_hs_dr_pio_test__d2m_s2l(struct hs_dr_pio_test_vars_t * tv_ptr)
static void
contig_hs_dr_pio_test__m2d_l2s(struct hs_dr_pio_test_vars_t * tv_ptr)
{
-#if CONTIG_HS_DR_PIO_TEST__M2D_L2S__DEBUG
+#if CONTIG_HS_DR_PIO_TEST__M2D_L2S__DEBUG
const char *fcnName = "contig_hs_dr_pio_test__m2d_l2s()";
#endif /* CONTIG_HS_DR_PIO_TEST__M2D_L2S__DEBUG */
- hbool_t mis_match = FALSE;
- int i, j, k, l;
- size_t n;
- int mpi_rank; /* needed by the VRFY macro */
+ hbool_t mis_match = FALSE;
+ int i, j, k, l;
+ size_t n;
+ int mpi_rank; /* needed by the VRFY macro */
size_t start_index;
size_t stop_index;
- uint32_t expected_value;
+ uint32_t expected_value;
uint32_t * ptr_1;
htri_t check; /* Shape comparison return value */
- herr_t ret; /* Generic return value */
+ herr_t ret; /* Generic return value */
/* initialize the local copy of mpi_rank */
mpi_rank = tv_ptr->mpi_rank;
@@ -1365,10 +1345,10 @@ contig_hs_dr_pio_test__m2d_l2s(struct hs_dr_pio_test_vars_t * tv_ptr)
* from memory to file using selections of different rank that
* H5S_select_shape_same() views as being of the same shape.
*
- * Start by writing small_rank - 1 dimensional slices from the in memory large
- * data set to the on disk small cube dataset. After each write, read the
- * slice of the small dataset back from disk, and verify that it contains
- * the expected data. Verify that H5S_select_shape_same() returns true on
+ * Start by writing small_rank - 1 dimensional slices from the in memory large
+ * data set to the on disk small cube dataset. After each write, read the
+ * slice of the small dataset back from disk, and verify that it contains
+ * the expected data. Verify that H5S_select_shape_same() returns true on
* the memory and file selections.
*/
@@ -1424,18 +1404,18 @@ contig_hs_dr_pio_test__m2d_l2s(struct hs_dr_pio_test_vars_t * tv_ptr)
HDmemset(tv_ptr->small_ds_buf_1, 0, sizeof(uint32_t) * tv_ptr->small_ds_size);
-#if CONTIG_HS_DR_PIO_TEST__M2D_L2S__DEBUG
- HDfprintf(stdout,
+#if CONTIG_HS_DR_PIO_TEST__M2D_L2S__DEBUG
+ HDfprintf(stdout,
"%s writing slices from big ds to slices of small ds on disk.\n",
fcnName);
#endif /* CONTIG_HS_DR_PIO_TEST__M2D_L2S__DEBUG */
/* in serial versions of this test, we loop through all the dimensions
- * of the large data set that don't appear in the small data set.
+ * of the large data set that don't appear in the small data set.
*
- * However, in the parallel version, each process only works with that
- * slice of the large (and small) data set indicated by its rank -- hence
- * we set the most slowly changing index to mpi_rank, and don't itterate
+ * However, in the parallel version, each process only works with that
+ * slice of the large (and small) data set indicated by its rank -- hence
+ * we set the most slowly changing index to mpi_rank, and don't itterate
* over it.
*/
@@ -1449,9 +1429,9 @@ contig_hs_dr_pio_test__m2d_l2s(struct hs_dr_pio_test_vars_t * tv_ptr)
i = 0;
}
- /* since large_rank is at most PAR_SS_DR_MAX_RANK, no need to
+ /* since large_rank is at most PAR_SS_DR_MAX_RANK, no need to
* loop over it -- either we are setting i to mpi_rank, or
- * we are setting it to zero. It will not change during the
+ * we are setting it to zero. It will not change during the
* test.
*/
@@ -1476,7 +1456,7 @@ contig_hs_dr_pio_test__m2d_l2s(struct hs_dr_pio_test_vars_t * tv_ptr)
}
do {
- /* since small rank >= 2 and large_rank > small_rank, we
+ /* since small rank >= 2 and large_rank > small_rank, we
* have large_rank >= 3. Since PAR_SS_DR_MAX_RANK == 5
* (baring major re-orgaization), this gives us:
*
@@ -1525,7 +1505,7 @@ contig_hs_dr_pio_test__m2d_l2s(struct hs_dr_pio_test_vars_t * tv_ptr)
tv_ptr->stride_ptr,
tv_ptr->count_ptr,
tv_ptr->block_ptr);
- VRFY((ret >= 0),
+ VRFY((ret >= 0),
"H5Sselect_hyperslab() mem_large_ds_sid succeeded.");
@@ -1538,13 +1518,13 @@ contig_hs_dr_pio_test__m2d_l2s(struct hs_dr_pio_test_vars_t * tv_ptr)
VRFY((check == TRUE), "H5S_select_shape_same_test passed.");
- /* write the slice from the in memory large data set to the
+ /* write the slice from the in memory large data set to the
* slice of the on disk small dataset. */
-#if CONTIG_HS_DR_PIO_TEST__M2D_L2S__DEBUG
- HDfprintf(stdout, "%s:%d: start = %d %d %d %d %d.\n",
+#if CONTIG_HS_DR_PIO_TEST__M2D_L2S__DEBUG
+ HDfprintf(stdout, "%s:%d: start = %d %d %d %d %d.\n",
fcnName, (int)(tv_ptr->mpi_rank),
- (int)(tv_ptr->start[0]), (int)(tv_ptr->start[1]),
- (int)(tv_ptr->start[2]), (int)(tv_ptr->start[3]),
+ (int)(tv_ptr->start[0]), (int)(tv_ptr->start[1]),
+ (int)(tv_ptr->start[2]), (int)(tv_ptr->start[3]),
(int)(tv_ptr->start[4]));
HDfprintf(stdout, "%s:%d: mem/file extent dims = %d/%d.\n",
fcnName, tv_ptr->mpi_rank,
@@ -1576,7 +1556,7 @@ contig_hs_dr_pio_test__m2d_l2s(struct hs_dr_pio_test_vars_t * tv_ptr)
ptr_1 = tv_ptr->small_ds_buf_1;
expected_value = (uint32_t)(
- (i * tv_ptr->edge_size * tv_ptr->edge_size *
+ (i * tv_ptr->edge_size * tv_ptr->edge_size *
tv_ptr->edge_size * tv_ptr->edge_size) +
(j * tv_ptr->edge_size * tv_ptr->edge_size * tv_ptr->edge_size) +
(k * tv_ptr->edge_size * tv_ptr->edge_size) +
@@ -1611,7 +1591,7 @@ contig_hs_dr_pio_test__m2d_l2s(struct hs_dr_pio_test_vars_t * tv_ptr)
ptr_1++;
}
- VRFY((mis_match == FALSE),
+ VRFY((mis_match == FALSE),
"small slice write from large ds data good.");
(tv_ptr->tests_run)++;
@@ -1639,31 +1619,27 @@ contig_hs_dr_pio_test__m2d_l2s(struct hs_dr_pio_test_vars_t * tv_ptr)
/*-------------------------------------------------------------------------
- * Function: contig_hs_dr_pio_test__m2d_s2l()
- *
- * Purpose: Part four of a series of tests of I/O to/from hyperslab
- * selections of different rank in the parallel.
+ * Function: contig_hs_dr_pio_test__m2d_s2l()
*
- * Verify that we can write from memory to file using
- * selections of different rank that H5S_select_shape_same()
- * views as being of the same shape.
+ * Purpose: Part four of a series of tests of I/O to/from hyperslab
+ * selections of different rank in the parallel.
*
- * Do this by writing the contents of the process's slice of
- * the in memory small data set to slices of the on disk
- * large data set. After each write, read the process's
- * slice of the large data set back into memory, and verify
- * that it contains the expected data.
+ * Verify that we can write from memory to file using
+ * selections of different rank that H5S_select_shape_same()
+ * views as being of the same shape.
*
- * Verify that H5S_select_shape_same() returns true on the
- * memory and file selections.
+ * Do this by writing the contents of the process's slice of
+ * the in memory small data set to slices of the on disk
+ * large data set. After each write, read the process's
+ * slice of the large data set back into memory, and verify
+ * that it contains the expected data.
*
- * Return: void
+ * Verify that H5S_select_shape_same() returns true on the
+ * memory and file selections.
*
- * Programmer: JRM -- 8/10/11
+ * Return: void
*
- * Modifications:
- *
- * None
+ * Programmer: JRM -- 8/10/11
*
*-------------------------------------------------------------------------
*/
@@ -1673,32 +1649,32 @@ contig_hs_dr_pio_test__m2d_l2s(struct hs_dr_pio_test_vars_t * tv_ptr)
static void
contig_hs_dr_pio_test__m2d_s2l(struct hs_dr_pio_test_vars_t * tv_ptr)
{
-#if CONTIG_HS_DR_PIO_TEST__M2D_S2L__DEBUG
+#if CONTIG_HS_DR_PIO_TEST__M2D_S2L__DEBUG
const char *fcnName = "contig_hs_dr_pio_test__m2d_s2l()";
#endif /* CONTIG_HS_DR_PIO_TEST__M2D_S2L__DEBUG */
- hbool_t mis_match = FALSE;
- int i, j, k, l;
- size_t n;
- int mpi_rank; /* needed by the VRFY macro */
+ hbool_t mis_match = FALSE;
+ int i, j, k, l;
+ size_t n;
+ int mpi_rank; /* needed by the VRFY macro */
size_t start_index;
size_t stop_index;
- uint32_t expected_value;
+ uint32_t expected_value;
uint32_t * ptr_1;
htri_t check; /* Shape comparison return value */
- herr_t ret; /* Generic return value */
+ herr_t ret; /* Generic return value */
/* initialize the local copy of mpi_rank */
mpi_rank = tv_ptr->mpi_rank;
- /* Now write the contents of the process's slice of the in memory
- * small data set to slices of the on disk large data set. After
+ /* Now write the contents of the process's slice of the in memory
+ * small data set to slices of the on disk large data set. After
* each write, read the process's slice of the large data set back
- * into memory, and verify that it contains the expected data.
- * Verify that H5S_select_shape_same() returns true on the memory
+ * into memory, and verify that it contains the expected data.
+ * Verify that H5S_select_shape_same() returns true on the memory
* and file selections.
*/
- /* select the slice of the in memory small data set associated with
+ /* select the slice of the in memory small data set associated with
* the process's mpi rank.
*/
tv_ptr->start[0] = (hsize_t)(tv_ptr->mpi_rank);
@@ -1745,8 +1721,8 @@ contig_hs_dr_pio_test__m2d_s2l(struct hs_dr_pio_test_vars_t * tv_ptr)
/* zero out the in memory large ds */
HDmemset(tv_ptr->large_ds_buf_1, 0, sizeof(uint32_t) * tv_ptr->large_ds_size);
-#if CONTIG_HS_DR_PIO_TEST__M2D_S2L__DEBUG
- HDfprintf(stdout,
+#if CONTIG_HS_DR_PIO_TEST__M2D_S2L__DEBUG
+ HDfprintf(stdout,
"%s writing process slices of small ds to slices of large ds on disk.\n",
fcnName);
#endif /* CONTIG_HS_DR_PIO_TEST__M2D_S2L__DEBUG */
@@ -1760,9 +1736,9 @@ contig_hs_dr_pio_test__m2d_s2l(struct hs_dr_pio_test_vars_t * tv_ptr)
i = 0;
}
- /* since large_rank is at most PAR_SS_DR_MAX_RANK, no need to
+ /* since large_rank is at most PAR_SS_DR_MAX_RANK, no need to
* loop over it -- either we are setting i to mpi_rank, or
- * we are setting it to zero. It will not change during the
+ * we are setting it to zero. It will not change during the
* test.
*/
@@ -1786,7 +1762,7 @@ contig_hs_dr_pio_test__m2d_s2l(struct hs_dr_pio_test_vars_t * tv_ptr)
}
do {
- /* since small rank >= 2 and large_rank > small_rank, we
+ /* since small rank >= 2 and large_rank > small_rank, we
* have large_rank >= 3. Since PAR_SS_DR_MAX_RANK == 5
* (baring major re-orgaization), this gives us:
*
@@ -1802,18 +1778,18 @@ contig_hs_dr_pio_test__m2d_s2l(struct hs_dr_pio_test_vars_t * tv_ptr)
(tv_ptr->tests_skipped)++;
-#if CONTIG_HS_DR_PIO_TEST__M2D_S2L__DEBUG
+#if CONTIG_HS_DR_PIO_TEST__M2D_S2L__DEBUG
tv_ptr->start[0] = (hsize_t)i;
tv_ptr->start[1] = (hsize_t)j;
tv_ptr->start[2] = (hsize_t)k;
tv_ptr->start[3] = (hsize_t)l;
tv_ptr->start[4] = 0;
- HDfprintf(stdout,
- "%s:%d: skipping test with start = %d %d %d %d %d.\n",
+ HDfprintf(stdout,
+ "%s:%d: skipping test with start = %d %d %d %d %d.\n",
fcnName, (int)(tv_ptr->mpi_rank),
- (int)(tv_ptr->start[0]), (int)(tv_ptr->start[1]),
- (int)(tv_ptr->start[2]), (int)(tv_ptr->start[3]),
+ (int)(tv_ptr->start[0]), (int)(tv_ptr->start[1]),
+ (int)(tv_ptr->start[2]), (int)(tv_ptr->start[3]),
(int)(tv_ptr->start[4]));
HDfprintf(stdout, "%s:%d: mem/file extent dims = %d/%d.\n",
fcnName, tv_ptr->mpi_rank,
@@ -1857,7 +1833,7 @@ contig_hs_dr_pio_test__m2d_s2l(struct hs_dr_pio_test_vars_t * tv_ptr)
tv_ptr->stride_ptr,
tv_ptr->count_ptr,
tv_ptr->block_ptr);
- VRFY((ret != FAIL),
+ VRFY((ret != FAIL),
"H5Sselect_hyperslab() target large ds slice succeeded");
@@ -1871,14 +1847,14 @@ contig_hs_dr_pio_test__m2d_s2l(struct hs_dr_pio_test_vars_t * tv_ptr)
VRFY((check == TRUE), "H5S_select_shape_same_test passed");
- /* write the small data set slice from memory to the
- * target slice of the disk data set
+ /* write the small data set slice from memory to the
+ * target slice of the disk data set
*/
-#if CONTIG_HS_DR_PIO_TEST__M2D_S2L__DEBUG
- HDfprintf(stdout, "%s:%d: start = %d %d %d %d %d.\n",
+#if CONTIG_HS_DR_PIO_TEST__M2D_S2L__DEBUG
+ HDfprintf(stdout, "%s:%d: start = %d %d %d %d %d.\n",
fcnName, (int)(tv_ptr->mpi_rank),
- (int)(tv_ptr->start[0]), (int)(tv_ptr->start[1]),
- (int)(tv_ptr->start[2]), (int)(tv_ptr->start[3]),
+ (int)(tv_ptr->start[0]), (int)(tv_ptr->start[1]),
+ (int)(tv_ptr->start[2]), (int)(tv_ptr->start[3]),
(int)(tv_ptr->start[4]));
HDfprintf(stdout, "%s:%d: mem/file extent dims = %d/%d.\n",
fcnName, tv_ptr->mpi_rank,
@@ -1891,11 +1867,11 @@ contig_hs_dr_pio_test__m2d_s2l(struct hs_dr_pio_test_vars_t * tv_ptr)
tv_ptr->file_large_ds_sid_0,
tv_ptr->xfer_plist,
tv_ptr->small_ds_buf_0);
- VRFY((ret != FAIL),
+ VRFY((ret != FAIL),
"H5Dwrite of small ds slice to large ds succeeded");
- /* read this processes slice on the on disk large
+ /* read this processes slice on the on disk large
* data set into memory.
*/
@@ -1905,7 +1881,7 @@ contig_hs_dr_pio_test__m2d_s2l(struct hs_dr_pio_test_vars_t * tv_ptr)
tv_ptr->file_large_ds_process_slice_sid,
tv_ptr->xfer_plist,
tv_ptr->large_ds_buf_1);
- VRFY((ret != FAIL),
+ VRFY((ret != FAIL),
"H5Dread() of process slice of large ds succeeded");
@@ -1914,12 +1890,12 @@ contig_hs_dr_pio_test__m2d_s2l(struct hs_dr_pio_test_vars_t * tv_ptr)
*/
ptr_1 = tv_ptr->large_ds_buf_1;
expected_value = (uint32_t)
- ((size_t)(tv_ptr->mpi_rank) * tv_ptr->small_ds_slice_size);
+ ((size_t)(tv_ptr->mpi_rank) * tv_ptr->small_ds_slice_size);
start_index = (size_t)
- ((i * tv_ptr->edge_size * tv_ptr->edge_size *
+ ((i * tv_ptr->edge_size * tv_ptr->edge_size *
tv_ptr->edge_size * tv_ptr->edge_size) +
- (j * tv_ptr->edge_size * tv_ptr->edge_size *
+ (j * tv_ptr->edge_size * tv_ptr->edge_size *
tv_ptr->edge_size) +
(k * tv_ptr->edge_size * tv_ptr->edge_size) +
(l * tv_ptr->edge_size));
@@ -1951,7 +1927,7 @@ contig_hs_dr_pio_test__m2d_s2l(struct hs_dr_pio_test_vars_t * tv_ptr)
ptr_1++;
}
- VRFY((mis_match == FALSE),
+ VRFY((mis_match == FALSE),
"small ds slice write to large ds slice data good.");
(tv_ptr->tests_run)++;
@@ -1979,29 +1955,29 @@ contig_hs_dr_pio_test__m2d_s2l(struct hs_dr_pio_test_vars_t * tv_ptr)
/*-------------------------------------------------------------------------
- * Function: contig_hs_dr_pio_test__run_test()
+ * Function: contig_hs_dr_pio_test__run_test()
*
- * Purpose: Test I/O to/from hyperslab selections of different rank in
- * the parallel.
+ * Purpose: Test I/O to/from hyperslab selections of different rank in
+ * the parallel.
*
- * Return: void
+ * Return: void
*
- * Programmer: JRM -- 9/18/09
+ * Programmer: JRM -- 9/18/09
*
* Modifications:
*
- * JRM -- 9/16/10
- * Added express_test parameter. Use it to control whether
- * we set up the chunks so that no chunk is shared between
- * processes, and also whether we set an alignment when we
- * create the test file.
+ * JRM -- 9/16/10
+ * Added express_test parameter. Use it to control whether
+ * we set up the chunks so that no chunk is shared between
+ * processes, and also whether we set an alignment when we
+ * create the test file.
*
- * JRM -- 8/11/11
- * Refactored function heavily & broke it into six functions.
- * Added the skips_ptr, max_skips, total_tests_ptr,
- * tests_run_ptr, and tests_skiped_ptr parameters to support
- * skipping portions of the test according to the express
- * test value.
+ * JRM -- 8/11/11
+ * Refactored function heavily & broke it into six functions.
+ * Added the skips_ptr, max_skips, total_tests_ptr,
+ * tests_run_ptr, and tests_skiped_ptr parameters to support
+ * skipping portions of the test according to the express
+ * test value.
*
*-------------------------------------------------------------------------
*/
@@ -2023,13 +1999,13 @@ contig_hs_dr_pio_test__run_test(const int test_num,
int64_t * tests_run_ptr,
int64_t * tests_skipped_ptr)
{
-#if CONTIG_HS_DR_PIO_TEST__RUN_TEST__DEBUG
+#if CONTIG_HS_DR_PIO_TEST__RUN_TEST__DEBUG
const char *fcnName = "contig_hs_dr_pio_test__run_test()";
#endif /* CONTIG_HS_DR_PIO_TEST__RUN_TEST__DEBUG */
- int mpi_rank;
- struct hs_dr_pio_test_vars_t test_vars =
+ int mpi_rank;
+ struct hs_dr_pio_test_vars_t test_vars =
{
- /* int mpi_size = */ -1,
+ /* int mpi_size = */ -1,
/* int mpi_rank = */ -1,
/* MPI_Comm mpi_comm = */ MPI_COMM_NULL,
/* MPI_Inf mpi_info = */ MPI_INFO_NULL,
@@ -2045,7 +2021,7 @@ contig_hs_dr_pio_test__run_test(const int test_num,
/* uint32_t * small_ds_buf_2 = */ NULL,
/* uint32_t * small_ds_slice_buf = */ NULL,
/* uint32_t * large_ds_buf_0 = */ NULL,
- /* uint32_t * large_ds_buf_1 = */ NULL,
+ /* uint32_t * large_ds_buf_1 = */ NULL,
/* uint32_t * large_ds_buf_2 = */ NULL,
/* uint32_t * large_ds_slice_buf = */ NULL,
/* int small_ds_offset = */ -1,
@@ -2082,8 +2058,8 @@ contig_hs_dr_pio_test__run_test(const int test_num,
/* hsize_t * stride_ptr = */ NULL,
/* hsize_t * count_ptr = */ NULL,
/* hsize_t * block_ptr = */ NULL,
- /* int skips = */ 0,
- /* int max_skips = */ 0,
+ /* int skips = */ 0,
+ /* int max_skips = */ 0,
/* int64_t total_tests = */ 0,
/* int64_t tests_run = */ 0,
/* int64_t tests_skipped = */ 0
@@ -2101,7 +2077,7 @@ contig_hs_dr_pio_test__run_test(const int test_num,
tv_ptr->skips = *skips_ptr;
tv_ptr->max_skips = max_skips;
-#if CONTIG_HS_DR_PIO_TEST__RUN_TEST__DEBUG
+#if CONTIG_HS_DR_PIO_TEST__RUN_TEST__DEBUG
if ( MAINPROCESS ) {
HDfprintf(stdout, "test %d: small rank = %d, large rank = %d.\n",
test_num, small_rank, large_rank);
@@ -2113,12 +2089,12 @@ contig_hs_dr_pio_test__run_test(const int test_num,
* of different rank that H5S_select_shape_same() views as being of the
* same shape.
*
- * Start by reading small_rank - 1 dimensional slice from the on disk
- * large cube, and verifying that the data read is correct. Verify that
+ * Start by reading small_rank - 1 dimensional slice from the on disk
+ * large cube, and verifying that the data read is correct. Verify that
* H5S_select_shape_same() returns true on the memory and file selections.
*/
-#if CONTIG_HS_DR_PIO_TEST__RUN_TEST__DEBUG
+#if CONTIG_HS_DR_PIO_TEST__RUN_TEST__DEBUG
if ( MAINPROCESS ) {
HDfprintf(stdout, "test %d: running contig_hs_dr_pio_test__d2m_l2s.\n", test_num);
}
@@ -2126,12 +2102,12 @@ contig_hs_dr_pio_test__run_test(const int test_num,
contig_hs_dr_pio_test__d2m_l2s(tv_ptr);
- /* Second, read slices of the on disk small data set into slices
- * through the in memory large data set, and verify that the correct
+ /* Second, read slices of the on disk small data set into slices
+ * through the in memory large data set, and verify that the correct
* data (and only the correct data) is read.
*/
-#if CONTIG_HS_DR_PIO_TEST__RUN_TEST__DEBUG
+#if CONTIG_HS_DR_PIO_TEST__RUN_TEST__DEBUG
if ( MAINPROCESS ) {
HDfprintf(stdout, "test %d: running contig_hs_dr_pio_test__d2m_s2l.\n", test_num);
}
@@ -2144,13 +2120,13 @@ contig_hs_dr_pio_test__run_test(const int test_num,
* H5S_select_shape_same() views as being of the same shape.
*
* Start by writing small_rank - 1 D slices from the in memory large data
- * set to the on disk small cube dataset. After each write, read the
- * slice of the small dataset back from disk, and verify that it contains
- * the expected data. Verify that H5S_select_shape_same() returns true on
+ * set to the on disk small cube dataset. After each write, read the
+ * slice of the small dataset back from disk, and verify that it contains
+ * the expected data. Verify that H5S_select_shape_same() returns true on
* the memory and file selections.
*/
-#if CONTIG_HS_DR_PIO_TEST__RUN_TEST__DEBUG
+#if CONTIG_HS_DR_PIO_TEST__RUN_TEST__DEBUG
if ( MAINPROCESS ) {
HDfprintf(stdout, "test %d: running contig_hs_dr_pio_test__m2d_l2s.\n", test_num);
}
@@ -2158,25 +2134,25 @@ contig_hs_dr_pio_test__run_test(const int test_num,
contig_hs_dr_pio_test__m2d_l2s(tv_ptr);
- /* Now write the contents of the process's slice of the in memory
- * small data set to slices of the on disk large data set. After
+ /* Now write the contents of the process's slice of the in memory
+ * small data set to slices of the on disk large data set. After
* each write, read the process's slice of the large data set back
- * into memory, and verify that it contains the expected data.
- * Verify that H5S_select_shape_same() returns true on the memory
+ * into memory, and verify that it contains the expected data.
+ * Verify that H5S_select_shape_same() returns true on the memory
* and file selections.
*/
-#if CONTIG_HS_DR_PIO_TEST__RUN_TEST__DEBUG
+#if CONTIG_HS_DR_PIO_TEST__RUN_TEST__DEBUG
if ( MAINPROCESS ) {
HDfprintf(stdout, "test %d: running contig_hs_dr_pio_test__m2d_s2l.\n", test_num);
}
#endif /* CONTIG_HS_DR_PIO_TEST__RUN_TEST__DEBUG */
contig_hs_dr_pio_test__m2d_s2l(tv_ptr);
-#if CONTIG_HS_DR_PIO_TEST__RUN_TEST__DEBUG
+#if CONTIG_HS_DR_PIO_TEST__RUN_TEST__DEBUG
if ( MAINPROCESS ) {
- HDfprintf(stdout,
- "test %d: Subtests complete -- tests run/skipped/total = %lld/%lld/%lld.\n",
+ HDfprintf(stdout,
+ "test %d: Subtests complete -- tests run/skipped/total = %lld/%lld/%lld.\n",
test_num, (long long)(tv_ptr->tests_run), (long long)(tv_ptr->tests_skipped),
(long long)(tv_ptr->total_tests));
}
@@ -2184,7 +2160,7 @@ contig_hs_dr_pio_test__run_test(const int test_num,
hs_dr_pio_test__takedown(tv_ptr);
-#if CONTIG_HS_DR_PIO_TEST__RUN_TEST__DEBUG
+#if CONTIG_HS_DR_PIO_TEST__RUN_TEST__DEBUG
if ( MAINPROCESS ) {
HDfprintf(stdout, "test %d: Takedown complete.\n", test_num);
}
@@ -2201,58 +2177,58 @@ contig_hs_dr_pio_test__run_test(const int test_num,
/*-------------------------------------------------------------------------
- * Function: contig_hs_dr_pio_test(ShapeSameTestMethods sstest_type)
+ * Function: contig_hs_dr_pio_test(ShapeSameTestMethods sstest_type)
*
- * Purpose: Test I/O to/from hyperslab selections of different rank in
- * the parallel case.
+ * Purpose: Test I/O to/from hyperslab selections of different rank in
+ * the parallel case.
*
- * Return: void
+ * Return: void
*
- * Programmer: JRM -- 9/18/09
+ * Programmer: JRM -- 9/18/09
*
* Modifications:
*
- * Modified function to take a sample of the run times
- * of the different tests, and skip some of them if
- * run times are too long.
+ * Modified function to take a sample of the run times
+ * of the different tests, and skip some of them if
+ * run times are too long.
*
- * We need to do this because Lustre runns very slowly
- * if two or more processes are banging on the same
- * block of memory.
- * JRM -- 9/10/10
+ * We need to do this because Lustre runns very slowly
+ * if two or more processes are banging on the same
+ * block of memory.
+ * JRM -- 9/10/10
* Break this one big test into 4 smaller tests according
* to {independent,collective}x{contigous,chunked} datasets.
- * AKC -- 2010/01/14
+ * AKC -- 2010/01/14
*
*-------------------------------------------------------------------------
*/
#define CONTIG_HS_DR_PIO_TEST__DEBUG 0
-void
+static void
contig_hs_dr_pio_test(ShapeSameTestMethods sstest_type)
{
int express_test;
int local_express_test;
int mpi_rank = -1;
int mpi_size;
- int test_num = 0;
- int edge_size;
- int chunk_edge_size = 0;
- int small_rank;
- int large_rank;
- int mpi_result;
- int skips = 0;
- int max_skips = 0;
- /* The following table list the number of sub-tests skipped between
- * each test that is actually executed as a function of the express
+ int test_num = 0;
+ int edge_size;
+ int chunk_edge_size = 0;
+ int small_rank;
+ int large_rank;
+ int mpi_result;
+ int skips = 0;
+ int max_skips = 0;
+ /* The following table list the number of sub-tests skipped between
+ * each test that is actually executed as a function of the express
* test level. Note that any value in excess of 4880 will cause all
* sub tests to be skipped.
*/
int max_skips_tbl[4] = {0, 4, 64, 1024};
- hid_t dset_type = H5T_NATIVE_UINT;
- int64_t total_tests = 0;
- int64_t tests_run = 0;
+ hid_t dset_type = H5T_NATIVE_UINT;
+ int64_t total_tests = 0;
+ int64_t tests_run = 0;
int64_t tests_skipped = 0;
HDcompile_assert(sizeof(uint32_t) == sizeof(unsigned));
@@ -2295,7 +2271,7 @@ contig_hs_dr_pio_test(ShapeSameTestMethods sstest_type)
chunk_edge_size,
small_rank,
large_rank,
- FALSE,
+ FALSE,
dset_type,
express_test,
&skips,
@@ -2316,7 +2292,7 @@ contig_hs_dr_pio_test(ShapeSameTestMethods sstest_type)
chunk_edge_size,
small_rank,
large_rank,
- TRUE,
+ TRUE,
dset_type,
express_test,
&skips,
@@ -2337,7 +2313,7 @@ contig_hs_dr_pio_test(ShapeSameTestMethods sstest_type)
chunk_edge_size,
small_rank,
large_rank,
- FALSE,
+ FALSE,
dset_type,
express_test,
&skips,
@@ -2358,7 +2334,7 @@ contig_hs_dr_pio_test(ShapeSameTestMethods sstest_type)
chunk_edge_size,
small_rank,
large_rank,
- TRUE,
+ TRUE,
dset_type,
express_test,
&skips,
@@ -2377,7 +2353,7 @@ contig_hs_dr_pio_test(ShapeSameTestMethods sstest_type)
} /* end of switch(sstest_type) */
#if CONTIG_HS_DR_PIO_TEST__DEBUG
if ( ( MAINPROCESS ) && ( tests_skipped > 0 ) ) {
- HDfprintf(stdout, " run/skipped/total = %lld/%lld/%lld.\n",
+ HDfprintf(stdout, " run/skipped/total = %lld/%lld/%lld.\n",
tests_run, tests_skipped, total_tests);
}
#endif /* CONTIG_HS_DR_PIO_TEST__DEBUG */
@@ -2385,7 +2361,7 @@ contig_hs_dr_pio_test(ShapeSameTestMethods sstest_type)
}
if ( ( MAINPROCESS ) && ( tests_skipped > 0 ) ) {
- HDfprintf(stdout, " %lld of %lld subtests skipped to expedite testing.\n",
+ HDfprintf(stdout, " %lld of %lld subtests skipped to expedite testing.\n",
tests_skipped, total_tests);
}
@@ -2396,24 +2372,24 @@ contig_hs_dr_pio_test(ShapeSameTestMethods sstest_type)
/****************************************************************
**
-** ckrbrd_hs_dr_pio_test__slct_ckrbrd():
-** Given a data space of tgt_rank, and dimensions:
+** ckrbrd_hs_dr_pio_test__slct_ckrbrd():
+** Given a dataspace of tgt_rank, and dimensions:
**
-** (mpi_size + 1), edge_size, ... , edge_size
+** (mpi_size + 1), edge_size, ... , edge_size
**
-** edge_size, and a checker_edge_size, select a checker
-** board selection of a sel_rank (sel_rank < tgt_rank)
-** dimensional slice through the data space parallel to the
+** edge_size, and a checker_edge_size, select a checker
+** board selection of a sel_rank (sel_rank < tgt_rank)
+** dimensional slice through the dataspace parallel to the
** sel_rank fastest changing indicies, with origin (in the
-** higher indicies) as indicated by the start array.
+** higher indicies) as indicated by the start array.
**
-** Note that this function, like all its relatives, is
-** hard coded to presume a maximum data space rank of 5.
-** While this maximum is declared as a constant, increasing
-** it will require extensive coding in addition to changing
+** Note that this function, like all its relatives, is
+** hard coded to presume a maximum dataspace rank of 5.
+** While this maximum is declared as a constant, increasing
+** it will require extensive coding in addition to changing
** the value of the constant.
**
-** JRM -- 10/8/09
+** JRM -- 10/8/09
**
****************************************************************/
@@ -2428,22 +2404,22 @@ ckrbrd_hs_dr_pio_test__slct_ckrbrd(const int mpi_rank,
const int sel_rank,
hsize_t sel_start[])
{
-#if CKRBRD_HS_DR_PIO_TEST__SELECT_CHECKER_BOARD__DEBUG
- const char * fcnName = "ckrbrd_hs_dr_pio_test__slct_ckrbrd():";
-#endif
- hbool_t first_selection = TRUE;
+#if CKRBRD_HS_DR_PIO_TEST__SELECT_CHECKER_BOARD__DEBUG
+ const char * fcnName = "ckrbrd_hs_dr_pio_test__slct_ckrbrd():";
+#endif
+ hbool_t first_selection = TRUE;
int i, j, k, l, m;
- int n_cube_offset;
- int sel_offset;
- const int test_max_rank = PAR_SS_DR_MAX_RANK; /* must update code if */
+ int n_cube_offset;
+ int sel_offset;
+ const int test_max_rank = PAR_SS_DR_MAX_RANK; /* must update code if */
/* this changes */
- hsize_t base_count;
+ hsize_t base_count;
hsize_t offset_count;
- hsize_t start[PAR_SS_DR_MAX_RANK];
- hsize_t stride[PAR_SS_DR_MAX_RANK];
- hsize_t count[PAR_SS_DR_MAX_RANK];
- hsize_t block[PAR_SS_DR_MAX_RANK];
- herr_t ret; /* Generic return value */
+ hsize_t start[PAR_SS_DR_MAX_RANK];
+ hsize_t stride[PAR_SS_DR_MAX_RANK];
+ hsize_t count[PAR_SS_DR_MAX_RANK];
+ hsize_t block[PAR_SS_DR_MAX_RANK];
+ herr_t ret; /* Generic return value */
HDassert( edge_size >= 6 );
HDassert( 0 < checker_edge_size );
@@ -2460,14 +2436,14 @@ ckrbrd_hs_dr_pio_test__slct_ckrbrd(const int mpi_rank,
HDassert( n_cube_offset >= 0 );
HDassert( n_cube_offset <= sel_offset );
-#if CKRBRD_HS_DR_PIO_TEST__SELECT_CHECKER_BOARD__DEBUG
+#if CKRBRD_HS_DR_PIO_TEST__SELECT_CHECKER_BOARD__DEBUG
HDfprintf(stdout, "%s:%d: edge_size/checker_edge_size = %d/%d\n",
fcnName, mpi_rank, edge_size, checker_edge_size);
- HDfprintf(stdout, "%s:%d: sel_rank/sel_offset = %d/%d.\n",
+ HDfprintf(stdout, "%s:%d: sel_rank/sel_offset = %d/%d.\n",
fcnName, mpi_rank, sel_rank, sel_offset);
- HDfprintf(stdout, "%s:%d: tgt_rank/n_cube_offset = %d/%d.\n",
+ HDfprintf(stdout, "%s:%d: tgt_rank/n_cube_offset = %d/%d.\n",
fcnName, mpi_rank, tgt_rank, n_cube_offset);
-#endif /* CKRBRD_HS_DR_PIO_TEST__SELECT_CHECKER_BOARD__DEBUG */
+#endif /* CKRBRD_HS_DR_PIO_TEST__SELECT_CHECKER_BOARD__DEBUG */
/* First, compute the base count (which assumes start == 0
* for the associated offset) and offset_count (which
@@ -2497,7 +2473,7 @@ ckrbrd_hs_dr_pio_test__slct_ckrbrd(const int mpi_rank,
}
/* Now set up the stride and block arrays, and portions of the start
- * and count arrays that will not be altered during the selection of
+ * and count arrays that will not be altered during the selection of
* the checker board.
*/
i = 0;
@@ -2529,7 +2505,7 @@ ckrbrd_hs_dr_pio_test__slct_ckrbrd(const int mpi_rank,
i++;
}
-
+
i = 0;
do {
if ( 0 >= sel_offset ) {
@@ -2548,7 +2524,7 @@ ckrbrd_hs_dr_pio_test__slct_ckrbrd(const int mpi_rank,
}
j = 0;
- do {
+ do {
if ( 1 >= sel_offset ) {
if ( j == 0 ) {
@@ -2617,62 +2593,62 @@ ckrbrd_hs_dr_pio_test__slct_ckrbrd(const int mpi_rank,
if ( ((i + j + k + l + m) % 2) == 0 ) {
-#if CKRBRD_HS_DR_PIO_TEST__SELECT_CHECKER_BOARD__DEBUG
- HDfprintf(stdout, "%s%d: *** first_selection = %d ***\n",
+#if CKRBRD_HS_DR_PIO_TEST__SELECT_CHECKER_BOARD__DEBUG
+ HDfprintf(stdout, "%s%d: *** first_selection = %d ***\n",
fcnName, mpi_rank, (int)first_selection);
HDfprintf(stdout, "%s:%d: i/j/k/l/m = %d/%d/%d/%d/%d\n",
fcnName, mpi_rank, i, j, k, l, m);
- HDfprintf(stdout,
- "%s:%d: start = %d %d %d %d %d.\n",
- fcnName, mpi_rank, (int)start[0], (int)start[1],
+ HDfprintf(stdout,
+ "%s:%d: start = %d %d %d %d %d.\n",
+ fcnName, mpi_rank, (int)start[0], (int)start[1],
(int)start[2], (int)start[3], (int)start[4]);
- HDfprintf(stdout,
- "%s:%d: stride = %d %d %d %d %d.\n",
- fcnName, mpi_rank, (int)stride[0], (int)stride[1],
+ HDfprintf(stdout,
+ "%s:%d: stride = %d %d %d %d %d.\n",
+ fcnName, mpi_rank, (int)stride[0], (int)stride[1],
(int)stride[2], (int)stride[3], (int)stride[4]);
- HDfprintf(stdout,
- "%s:%d: count = %d %d %d %d %d.\n",
- fcnName, mpi_rank, (int)count[0], (int)count[1],
+ HDfprintf(stdout,
+ "%s:%d: count = %d %d %d %d %d.\n",
+ fcnName, mpi_rank, (int)count[0], (int)count[1],
(int)count[2], (int)count[3], (int)count[4]);
- HDfprintf(stdout,
- "%s:%d: block = %d %d %d %d %d.\n",
- fcnName, mpi_rank, (int)block[0], (int)block[1],
+ HDfprintf(stdout,
+ "%s:%d: block = %d %d %d %d %d.\n",
+ fcnName, mpi_rank, (int)block[0], (int)block[1],
(int)block[2], (int)block[3], (int)block[4]);
- HDfprintf(stdout, "%s:%d: n-cube extent dims = %d.\n",
+ HDfprintf(stdout, "%s:%d: n-cube extent dims = %d.\n",
fcnName, mpi_rank,
H5Sget_simple_extent_ndims(tgt_sid));
- HDfprintf(stdout, "%s:%d: selection rank = %d.\n",
+ HDfprintf(stdout, "%s:%d: selection rank = %d.\n",
fcnName, mpi_rank, sel_rank);
#endif
if ( first_selection ) {
- first_selection = FALSE;
+ first_selection = FALSE;
ret = H5Sselect_hyperslab
(
- tgt_sid,
+ tgt_sid,
H5S_SELECT_SET,
- &(start[n_cube_offset]),
- &(stride[n_cube_offset]),
- &(count[n_cube_offset]),
+ &(start[n_cube_offset]),
+ &(stride[n_cube_offset]),
+ &(count[n_cube_offset]),
&(block[n_cube_offset])
);
-
+
VRFY((ret != FAIL), "H5Sselect_hyperslab(SET) succeeded");
} else {
ret = H5Sselect_hyperslab
(
- tgt_sid,
+ tgt_sid,
H5S_SELECT_OR,
- &(start[n_cube_offset]),
- &(stride[n_cube_offset]),
- &(count[n_cube_offset]),
+ &(start[n_cube_offset]),
+ &(stride[n_cube_offset]),
+ &(count[n_cube_offset]),
&(block[n_cube_offset])
);
-
+
VRFY((ret != FAIL), "H5Sselect_hyperslab(OR) succeeded");
}
@@ -2704,12 +2680,12 @@ ckrbrd_hs_dr_pio_test__slct_ckrbrd(const int mpi_rank,
} while ( ( i <= 1 ) &&
( 0 >= sel_offset ) );
-#if CKRBRD_HS_DR_PIO_TEST__SELECT_CHECKER_BOARD__DEBUG
+#if CKRBRD_HS_DR_PIO_TEST__SELECT_CHECKER_BOARD__DEBUG
HDfprintf(stdout, "%s%d: H5Sget_select_npoints(tgt_sid) = %d.\n",
fcnName, mpi_rank, (int)H5Sget_select_npoints(tgt_sid));
#endif /* CKRBRD_HS_DR_PIO_TEST__SELECT_CHECKER_BOARD__DEBUG */
- /* Clip the selection back to the data space proper. */
+ /* Clip the selection back to the dataspace proper. */
for ( i = 0; i < test_max_rank; i++ ) {
@@ -2724,7 +2700,7 @@ ckrbrd_hs_dr_pio_test__slct_ckrbrd(const int mpi_rank,
VRFY((ret != FAIL), "H5Sselect_hyperslab(AND) succeeded");
-#if CKRBRD_HS_DR_PIO_TEST__SELECT_CHECKER_BOARD__DEBUG
+#if CKRBRD_HS_DR_PIO_TEST__SELECT_CHECKER_BOARD__DEBUG
HDfprintf(stdout, "%s%d: H5Sget_select_npoints(tgt_sid) = %d.\n",
fcnName, mpi_rank, (int)H5Sget_select_npoints(tgt_sid));
HDfprintf(stdout, "%s%d: done.\n", fcnName, mpi_rank);
@@ -2737,57 +2713,57 @@ ckrbrd_hs_dr_pio_test__slct_ckrbrd(const int mpi_rank,
/****************************************************************
**
-** ckrbrd_hs_dr_pio_test__verify_data():
+** ckrbrd_hs_dr_pio_test__verify_data():
**
-** Examine the supplied buffer to see if it contains the
-** expected data. Return TRUE if it does, and FALSE
+** Examine the supplied buffer to see if it contains the
+** expected data. Return TRUE if it does, and FALSE
** otherwise.
**
-** The supplied buffer is presumed to this process's slice
-** of the target data set. Each such slice will be an
-** n-cube of rank (rank -1) and the supplied edge_size with
-** origin (mpi_rank, 0, ... , 0) in the target data set.
+** The supplied buffer is presumed to this process's slice
+** of the target data set. Each such slice will be an
+** n-cube of rank (rank -1) and the supplied edge_size with
+** origin (mpi_rank, 0, ... , 0) in the target data set.
**
-** Further, the buffer is presumed to be the result of reading
-** or writing a checker board selection of an m (1 <= m <
+** Further, the buffer is presumed to be the result of reading
+** or writing a checker board selection of an m (1 <= m <
** rank) dimensional slice through this processes slice
-** of the target data set. Also, this slice must be parallel
-** to the fastest changing indicies.
+** of the target data set. Also, this slice must be parallel
+** to the fastest changing indicies.
**
-** It is further presumed that the buffer was zeroed before
-** the read/write, and that the full target data set (i.e.
-** the buffer/data set for all processes) was initialized
-** with the natural numbers listed in order from the origin
-** along the fastest changing axis.
+** It is further presumed that the buffer was zeroed before
+** the read/write, and that the full target data set (i.e.
+** the buffer/data set for all processes) was initialized
+** with the natural numbers listed in order from the origin
+** along the fastest changing axis.
**
** Thus for a 20x10x10 dataset, the value stored in location
-** (x, y, z) (assuming that z is the fastest changing index
-** and x the slowest) is assumed to be:
+** (x, y, z) (assuming that z is the fastest changing index
+** and x the slowest) is assumed to be:
**
-** (10 * 10 * x) + (10 * y) + z
+** (10 * 10 * x) + (10 * y) + z
**
-** Further, supposing that this is process 10, this process's
-** slice of the dataset would be a 10 x 10 2-cube with origin
-** (10, 0, 0) in the data set, and would be initialize (prior
-** to the checkerboard selection) as follows:
+** Further, supposing that this is process 10, this process's
+** slice of the dataset would be a 10 x 10 2-cube with origin
+** (10, 0, 0) in the data set, and would be initialize (prior
+** to the checkerboard selection) as follows:
**
-** 1000, 1001, 1002, ... 1008, 1009
-** 1010, 1011, 1012, ... 1018, 1019
-** . . . . .
-** . . . . .
-** . . . . .
-** 1090, 1091, 1092, ... 1098, 1099
+** 1000, 1001, 1002, ... 1008, 1009
+** 1010, 1011, 1012, ... 1018, 1019
+** . . . . .
+** . . . . .
+** . . . . .
+** 1090, 1091, 1092, ... 1098, 1099
**
-** In the case of a read from the processors slice of another
-** data set of different rank, the values expected will have
-** to be adjusted accordingly. This is done via the
-** first_expected_val parameter.
+** In the case of a read from the processors slice of another
+** data set of different rank, the values expected will have
+** to be adjusted accordingly. This is done via the
+** first_expected_val parameter.
**
-** Finally, the function presumes that the first element
-** of the buffer resides either at the origin of either
-** a selected or an unselected checker. (Translation:
-** if partial checkers appear in the buffer, they will
-** intersect the edges of the n-cube oposite the origin.)
+** Finally, the function presumes that the first element
+** of the buffer resides either at the origin of either
+** a selected or an unselected checker. (Translation:
+** if partial checkers appear in the buffer, they will
+** intersect the edges of the n-cube oposite the origin.)
**
****************************************************************/
@@ -2802,7 +2778,7 @@ ckrbrd_hs_dr_pio_test__verify_data(uint32_t * buf_ptr,
hbool_t buf_starts_in_checker)
{
#if CKRBRD_HS_DR_PIO_TEST__VERIFY_DATA__DEBUG
- const char * fcnName = "ckrbrd_hs_dr_pio_test__verify_data():";
+ const char * fcnName = "ckrbrd_hs_dr_pio_test__verify_data():";
#endif
hbool_t good_data = TRUE;
hbool_t in_checker;
@@ -2821,9 +2797,9 @@ ckrbrd_hs_dr_pio_test__verify_data(uint32_t * buf_ptr,
HDassert( checker_edge_size <= edge_size );
HDassert( test_max_rank <= PAR_SS_DR_MAX_RANK );
-#if CKRBRD_HS_DR_PIO_TEST__VERIFY_DATA__DEBUG
+#if CKRBRD_HS_DR_PIO_TEST__VERIFY_DATA__DEBUG
- int mpi_rank;
+ int mpi_rank;
MPI_Comm_rank(MPI_COMM_WORLD, &mpi_rank);
HDfprintf(stdout, "%s mpi_rank = %d.\n", fcnName, mpi_rank);
@@ -2875,7 +2851,7 @@ ckrbrd_hs_dr_pio_test__verify_data(uint32_t * buf_ptr,
y = 0;
start_in_checker[3] = start_in_checker[2];
do
- {
+ {
if ( y >= checker_edge_size ) {
start_in_checker[3] = ! start_in_checker[3];
@@ -2884,13 +2860,13 @@ ckrbrd_hs_dr_pio_test__verify_data(uint32_t * buf_ptr,
m = 0;
z = 0;
-#if CKRBRD_HS_DR_PIO_TEST__VERIFY_DATA__DEBUG
+#if CKRBRD_HS_DR_PIO_TEST__VERIFY_DATA__DEBUG
HDfprintf(stdout, "%d, %d, %d, %d, %d:", i, j, k, l, m);
#endif
in_checker = start_in_checker[3];
do
{
-#if CKRBRD_HS_DR_PIO_TEST__VERIFY_DATA__DEBUG
+#if CKRBRD_HS_DR_PIO_TEST__VERIFY_DATA__DEBUG
HDfprintf(stdout, " %d", (int)(*val_ptr));
#endif
if ( z >= checker_edge_size ) {
@@ -2898,21 +2874,21 @@ ckrbrd_hs_dr_pio_test__verify_data(uint32_t * buf_ptr,
in_checker = ! in_checker;
z = 0;
}
-
+
if ( in_checker ) {
-
+
if ( *val_ptr != expected_value ) {
good_data = FALSE;
}
-
+
/* zero out buffer for re-use */
*val_ptr = 0;
} else if ( *val_ptr != 0 ) {
good_data = FALSE;
-
+
/* zero out buffer for re-use */
*val_ptr = 0;
@@ -2922,10 +2898,10 @@ ckrbrd_hs_dr_pio_test__verify_data(uint32_t * buf_ptr,
expected_value++;
m++;
z++;
-
+
} while ( ( rank >= (test_max_rank - 4) ) &&
( m < edge_size ) );
-#if CKRBRD_HS_DR_PIO_TEST__VERIFY_DATA__DEBUG
+#if CKRBRD_HS_DR_PIO_TEST__VERIFY_DATA__DEBUG
HDfprintf(stdout, "\n");
#endif
l++;
@@ -2951,28 +2927,24 @@ ckrbrd_hs_dr_pio_test__verify_data(uint32_t * buf_ptr,
/*-------------------------------------------------------------------------
- * Function: ckrbrd_hs_dr_pio_test__d2m_l2s()
+ * Function: ckrbrd_hs_dr_pio_test__d2m_l2s()
*
- * Purpose: Part one of a series of tests of I/O to/from hyperslab
- * selections of different rank in the parallel.
+ * Purpose: Part one of a series of tests of I/O to/from hyperslab
+ * selections of different rank in the parallel.
*
- * Verify that we can read from disk correctly using checker
- * board selections of different rank that
+ * Verify that we can read from disk correctly using checker
+ * board selections of different rank that
* H5S_select_shape_same() views as being of the same shape.
*
- * In this function, we test this by reading small_rank - 1
- * checker board slices from the on disk large cube, and
- * verifying that the data read is correct. Verify that
- * H5S_select_shape_same() returns true on the memory and
- * file selections.
- *
- * Return: void
+ * In this function, we test this by reading small_rank - 1
+ * checker board slices from the on disk large cube, and
+ * verifying that the data read is correct. Verify that
+ * H5S_select_shape_same() returns true on the memory and
+ * file selections.
*
- * Programmer: JRM -- 9/15/11
- *
- * Modifications:
+ * Return: void
*
- * None.
+ * Programmer: JRM -- 9/15/11
*
*-------------------------------------------------------------------------
*/
@@ -2982,17 +2954,17 @@ ckrbrd_hs_dr_pio_test__verify_data(uint32_t * buf_ptr,
static void
ckrbrd_hs_dr_pio_test__d2m_l2s(struct hs_dr_pio_test_vars_t * tv_ptr)
{
-#if CHECKER_BOARD_HS_DR_PIO_TEST__D2M_L2S__DEBUG
+#if CHECKER_BOARD_HS_DR_PIO_TEST__D2M_L2S__DEBUG
const char *fcnName = "ckrbrd_hs_dr_pio_test__d2m_l2s()";
uint32_t * ptr_0;
#endif /* CHECKER_BOARD_HS_DR_PIO_TEST__D2M_L2S__DEBUG */
- hbool_t data_ok = FALSE;
- int i, j, k, l;
- uint32_t expected_value;
- int mpi_rank; /* needed by VRFY */
+ hbool_t data_ok = FALSE;
+ int i, j, k, l;
+ uint32_t expected_value;
+ int mpi_rank; /* needed by VRFY */
hsize_t sel_start[PAR_SS_DR_MAX_RANK];
htri_t check; /* Shape comparison return value */
- herr_t ret; /* Generic return value */
+ herr_t ret; /* Generic return value */
/* initialize the local copy of mpi_rank */
mpi_rank = tv_ptr->mpi_rank;
@@ -3002,9 +2974,9 @@ ckrbrd_hs_dr_pio_test__d2m_l2s(struct hs_dr_pio_test_vars_t * tv_ptr)
* of different rank that H5S_select_shape_same() views as being of the
* same shape.
*
- * Start by reading a (small_rank - 1)-D checker board slice from this
- * processes slice of the on disk large data set, and verifying that the
- * data read is correct. Verify that H5S_select_shape_same() returns
+ * Start by reading a (small_rank - 1)-D checker board slice from this
+ * processes slice of the on disk large data set, and verifying that the
+ * data read is correct. Verify that H5S_select_shape_same() returns
* true on the memory and file selections.
*
* The first step is to set up the needed checker board selection in the
@@ -3025,7 +2997,7 @@ ckrbrd_hs_dr_pio_test__d2m_l2s(struct hs_dr_pio_test_vars_t * tv_ptr)
/* zero out the buffer we will be reading into */
HDmemset(tv_ptr->small_ds_slice_buf, 0, sizeof(uint32_t) * tv_ptr->small_ds_slice_size);
-#if CHECKER_BOARD_HS_DR_PIO_TEST__D2M_L2S__DEBUG
+#if CHECKER_BOARD_HS_DR_PIO_TEST__D2M_L2S__DEBUG
HDfprintf(stdout, "%s:%d: initial small_ds_slice_buf = ",
fcnName, tv_ptr->mpi_rank);
ptr_0 = tv_ptr->small_ds_slice_buf;
@@ -3034,7 +3006,7 @@ ckrbrd_hs_dr_pio_test__d2m_l2s(struct hs_dr_pio_test_vars_t * tv_ptr)
ptr_0++;
}
HDfprintf(stdout, "\n");
-#endif /* CHECKER_BOARD_HS_DR_PIO_TEST__D2M_L2S__DEBUG */
+#endif /* CHECKER_BOARD_HS_DR_PIO_TEST__D2M_L2S__DEBUG */
/* set up start, stride, count, and block -- note that we will
* change start[] so as to read slices of the large cube.
@@ -3054,15 +3026,15 @@ ckrbrd_hs_dr_pio_test__d2m_l2s(struct hs_dr_pio_test_vars_t * tv_ptr)
}
}
-#if CHECKER_BOARD_HS_DR_PIO_TEST__D2M_L2S__DEBUG
- HDfprintf(stdout,
+#if CHECKER_BOARD_HS_DR_PIO_TEST__D2M_L2S__DEBUG
+ HDfprintf(stdout,
"%s:%d: reading slice from big ds on disk into small ds slice.\n",
fcnName, tv_ptr->mpi_rank);
-#endif /* CHECKER_BOARD_HS_DR_PIO_TEST__D2M_L2S__DEBUG */
+#endif /* CHECKER_BOARD_HS_DR_PIO_TEST__D2M_L2S__DEBUG */
/* in serial versions of this test, we loop through all the dimensions
- * of the large data set. However, in the parallel version, each
+ * of the large data set. However, in the parallel version, each
* process only works with that slice of the large cube indicated
- * by its rank -- hence we set the most slowly changing index to
+ * by its rank -- hence we set the most slowly changing index to
* mpi_rank, and don't itterate over it.
*/
@@ -3075,9 +3047,9 @@ ckrbrd_hs_dr_pio_test__d2m_l2s(struct hs_dr_pio_test_vars_t * tv_ptr)
i = 0;
}
- /* since large_rank is at most PAR_SS_DR_MAX_RANK, no need to
+ /* since large_rank is at most PAR_SS_DR_MAX_RANK, no need to
* loop over it -- either we are setting i to mpi_rank, or
- * we are setting it to zero. It will not change during the
+ * we are setting it to zero. It will not change during the
* test.
*/
@@ -3101,7 +3073,7 @@ ckrbrd_hs_dr_pio_test__d2m_l2s(struct hs_dr_pio_test_vars_t * tv_ptr)
}
do {
- /* since small rank >= 2 and large_rank > small_rank, we
+ /* since small rank >= 2 and large_rank > small_rank, we
* have large_rank >= 3. Since PAR_SS_DR_MAX_RANK == 5
* (baring major re-orgaization), this gives us:
*
@@ -3121,8 +3093,8 @@ ckrbrd_hs_dr_pio_test__d2m_l2s(struct hs_dr_pio_test_vars_t * tv_ptr)
tv_ptr->skips = 0; /* reset the skips counter */
- /* we know that small_rank - 1 >= 1 and that
- * large_rank > small_rank by the assertions at the head
+ /* we know that small_rank - 1 >= 1 and that
+ * large_rank > small_rank by the assertions at the head
* of this function. Thus no need for another inner loop.
*/
tv_ptr->start[0] = (hsize_t)i;
@@ -3157,15 +3129,15 @@ ckrbrd_hs_dr_pio_test__d2m_l2s(struct hs_dr_pio_test_vars_t * tv_ptr)
/* Read selection from disk */
-#if CHECKER_BOARD_HS_DR_PIO_TEST__D2M_L2S__DEBUG
+#if CHECKER_BOARD_HS_DR_PIO_TEST__D2M_L2S__DEBUG
HDfprintf(stdout, "%s:%d: start = %d %d %d %d %d.\n", fcnName,
- tv_ptr->mpi_rank, tv_ptr->start[0], tv_ptr->start[1],
+ tv_ptr->mpi_rank, tv_ptr->start[0], tv_ptr->start[1],
tv_ptr->start[2], tv_ptr->start[3], tv_ptr->start[4]);
HDfprintf(stdout, "%s slice/file extent dims = %d/%d.\n",
fcnName,
H5Sget_simple_extent_ndims(tv_ptr->small_ds_slice_sid),
H5Sget_simple_extent_ndims(tv_ptr->file_large_ds_sid_0));
-#endif /* CHECKER_BOARD_HS_DR_PIO_TEST__D2M_L2S__DEBUG */
+#endif /* CHECKER_BOARD_HS_DR_PIO_TEST__D2M_L2S__DEBUG */
ret = H5Dread(tv_ptr->large_dataset,
H5T_NATIVE_UINT32,
@@ -3175,15 +3147,15 @@ ckrbrd_hs_dr_pio_test__d2m_l2s(struct hs_dr_pio_test_vars_t * tv_ptr)
tv_ptr->small_ds_slice_buf);
VRFY((ret >= 0), "H5Dread() slice from large ds succeeded.");
-#if CHECKER_BOARD_HS_DR_PIO_TEST__D2M_L2S__DEBUG
- HDfprintf(stdout, "%s:%d: H5Dread() returns.\n",
+#if CHECKER_BOARD_HS_DR_PIO_TEST__D2M_L2S__DEBUG
+ HDfprintf(stdout, "%s:%d: H5Dread() returns.\n",
fcnName, tv_ptr->mpi_rank);
#endif /* CHECKER_BOARD_HS_DR_PIO_TEST__D2M_L2S__DEBUG */
/* verify that expected data is retrieved */
expected_value = (uint32_t)
- ((i * tv_ptr->edge_size * tv_ptr->edge_size *
+ ((i * tv_ptr->edge_size * tv_ptr->edge_size *
tv_ptr->edge_size * tv_ptr->edge_size) +
(j * tv_ptr->edge_size * tv_ptr->edge_size * tv_ptr->edge_size) +
(k * tv_ptr->edge_size * tv_ptr->edge_size) +
@@ -3199,7 +3171,7 @@ ckrbrd_hs_dr_pio_test__d2m_l2s(struct hs_dr_pio_test_vars_t * tv_ptr)
(hbool_t)TRUE
);
- VRFY((data_ok == TRUE),
+ VRFY((data_ok == TRUE),
"small slice read from large ds data good.");
(tv_ptr->tests_run)++;
@@ -3227,27 +3199,23 @@ ckrbrd_hs_dr_pio_test__d2m_l2s(struct hs_dr_pio_test_vars_t * tv_ptr)
/*-------------------------------------------------------------------------
- * Function: ckrbrd_hs_dr_pio_test__d2m_s2l()
+ * Function: ckrbrd_hs_dr_pio_test__d2m_s2l()
*
- * Purpose: Part two of a series of tests of I/O to/from hyperslab
- * selections of different rank in the parallel.
+ * Purpose: Part two of a series of tests of I/O to/from hyperslab
+ * selections of different rank in the parallel.
*
- * Verify that we can read from disk correctly using
- * selections of different rank that H5S_select_shape_same()
- * views as being of the same shape.
+ * Verify that we can read from disk correctly using
+ * selections of different rank that H5S_select_shape_same()
+ * views as being of the same shape.
*
- * In this function, we test this by reading checker board
- * slices of the on disk small data set into slices through
- * the in memory large data set, and verify that the correct
- * data (and only the correct data) is read.
+ * In this function, we test this by reading checker board
+ * slices of the on disk small data set into slices through
+ * the in memory large data set, and verify that the correct
+ * data (and only the correct data) is read.
*
- * Return: void
+ * Return: void
*
- * Programmer: JRM -- 8/15/11
- *
- * Modifications:
- *
- * None.
+ * Programmer: JRM -- 8/15/11
*
*-------------------------------------------------------------------------
*/
@@ -3257,27 +3225,27 @@ ckrbrd_hs_dr_pio_test__d2m_l2s(struct hs_dr_pio_test_vars_t * tv_ptr)
static void
ckrbrd_hs_dr_pio_test__d2m_s2l(struct hs_dr_pio_test_vars_t * tv_ptr)
{
-#if CHECKER_BOARD_HS_DR_PIO_TEST__D2M_S2L__DEBUG
+#if CHECKER_BOARD_HS_DR_PIO_TEST__D2M_S2L__DEBUG
const char *fcnName = "ckrbrd_hs_dr_pio_test__d2m_s2l()";
#endif /* CHECKER_BOARD_HS_DR_PIO_TEST__D2M_S2L__DEBUG */
- hbool_t data_ok = FALSE;
- int i, j, k, l;
+ hbool_t data_ok = FALSE;
+ int i, j, k, l;
size_t u;
size_t start_index;
size_t stop_index;
- uint32_t expected_value;
+ uint32_t expected_value;
uint32_t * ptr_1;
- int mpi_rank; /* needed by VRFY */
+ int mpi_rank; /* needed by VRFY */
hsize_t sel_start[PAR_SS_DR_MAX_RANK];
htri_t check; /* Shape comparison return value */
- herr_t ret; /* Generic return value */
+ herr_t ret; /* Generic return value */
/* initialize the local copy of mpi_rank */
mpi_rank = tv_ptr->mpi_rank;
- /* similarly, read slices of the on disk small data set into slices
- * through the in memory large data set, and verify that the correct
+ /* similarly, read slices of the on disk small data set into slices
+ * through the in memory large data set, and verify that the correct
* data (and only the correct data) is read.
*/
@@ -3292,8 +3260,8 @@ ckrbrd_hs_dr_pio_test__d2m_s2l(struct hs_dr_pio_test_vars_t * tv_ptr)
tv_ptr->small_rank - 1,
sel_start);
-#if CHECKER_BOARD_HS_DR_PIO_TEST__D2M_S2L__DEBUG
- HDfprintf(stdout,
+#if CHECKER_BOARD_HS_DR_PIO_TEST__D2M_S2L__DEBUG
+ HDfprintf(stdout,
"%s reading slices of on disk small data set into slices of big data set.\n",
fcnName);
#endif /* CHECKER_BOARD_HS_DR_PIO_TEST__D2M_S2L__DEBUG */
@@ -3303,7 +3271,7 @@ ckrbrd_hs_dr_pio_test__d2m_s2l(struct hs_dr_pio_test_vars_t * tv_ptr)
/* set up start, stride, count, and block -- note that we will
* change start[] so as to read the slice of the small data set
- * into different slices of the process slice of the large data
+ * into different slices of the process slice of the large data
* set.
*/
for ( i = 0; i < PAR_SS_DR_MAX_RANK; i++ ) {
@@ -3322,11 +3290,11 @@ ckrbrd_hs_dr_pio_test__d2m_s2l(struct hs_dr_pio_test_vars_t * tv_ptr)
}
/* in serial versions of this test, we loop through all the dimensions
- * of the large data set that don't appear in the small data set.
+ * of the large data set that don't appear in the small data set.
*
- * However, in the parallel version, each process only works with that
- * slice of the large (and small) data set indicated by its rank -- hence
- * we set the most slowly changing index to mpi_rank, and don't itterate
+ * However, in the parallel version, each process only works with that
+ * slice of the large (and small) data set indicated by its rank -- hence
+ * we set the most slowly changing index to mpi_rank, and don't itterate
* over it.
*/
@@ -3340,9 +3308,9 @@ ckrbrd_hs_dr_pio_test__d2m_s2l(struct hs_dr_pio_test_vars_t * tv_ptr)
i = 0;
}
- /* since large_rank is at most PAR_SS_DR_MAX_RANK, no need to
+ /* since large_rank is at most PAR_SS_DR_MAX_RANK, no need to
* loop over it -- either we are setting i to mpi_rank, or
- * we are setting it to zero. It will not change during the
+ * we are setting it to zero. It will not change during the
* test.
*/
@@ -3366,7 +3334,7 @@ ckrbrd_hs_dr_pio_test__d2m_s2l(struct hs_dr_pio_test_vars_t * tv_ptr)
}
do {
- /* since small rank >= 2 and large_rank > small_rank, we
+ /* since small rank >= 2 and large_rank > small_rank, we
* have large_rank >= 3. Since PAR_SS_DR_MAX_RANK == 5
* (baring major re-orgaization), this gives us:
*
@@ -3423,11 +3391,11 @@ ckrbrd_hs_dr_pio_test__d2m_s2l(struct hs_dr_pio_test_vars_t * tv_ptr)
/* Read selection from disk */
-#if CHECKER_BOARD_HS_DR_PIO_TEST__D2M_S2L__DEBUG
- HDfprintf(stdout, "%s:%d: start = %d %d %d %d %d.\n",
- fcnName, tv_ptr->mpi_rank,
- tv_ptr->start[0], tv_ptr->start[1], tv_ptr->start[2],
- tv_ptr->start[3], tv_ptr->start[4]);
+#if CHECKER_BOARD_HS_DR_PIO_TEST__D2M_S2L__DEBUG
+ HDfprintf(stdout, "%s:%d: start = %d %d %d %d %d.\n",
+ fcnName, tv_ptr->mpi_rank,
+ tv_ptr->start[0], tv_ptr->start[1], tv_ptr->start[2],
+ tv_ptr->start[3], tv_ptr->start[4]);
HDfprintf(stdout, "%s:%d: mem/file extent dims = %d/%d.\n",
fcnName, tv_ptr->mpi_rank,
H5Sget_simple_extent_ndims(tv_ptr->large_ds_slice_sid),
@@ -3446,21 +3414,21 @@ ckrbrd_hs_dr_pio_test__d2m_s2l(struct hs_dr_pio_test_vars_t * tv_ptr)
*/
data_ok = TRUE;
ptr_1 = tv_ptr->large_ds_buf_1;
- expected_value =
+ expected_value =
(uint32_t)((size_t)(tv_ptr->mpi_rank) * tv_ptr->small_ds_slice_size);
start_index = (size_t)(
- (i * tv_ptr->edge_size * tv_ptr->edge_size *
+ (i * tv_ptr->edge_size * tv_ptr->edge_size *
tv_ptr->edge_size * tv_ptr->edge_size) +
(j * tv_ptr->edge_size * tv_ptr->edge_size * tv_ptr->edge_size) +
(k * tv_ptr->edge_size * tv_ptr->edge_size) +
(l * tv_ptr->edge_size));
stop_index = start_index + tv_ptr->small_ds_slice_size - 1;
-#if CHECKER_BOARD_HS_DR_PIO_TEST__D2M_S2L__DEBUG
+#if CHECKER_BOARD_HS_DR_PIO_TEST__D2M_S2L__DEBUG
{
int m, n;
- HDfprintf(stdout, "%s:%d: expected_value = %d.\n",
+ HDfprintf(stdout, "%s:%d: expected_value = %d.\n",
fcnName, tv_ptr->mpi_rank, expected_value);
HDfprintf(stdout, "%s:%d: start/stop index = %d/%d.\n",
fcnName, tv_ptr->mpi_rank, start_index, stop_index);
@@ -3495,7 +3463,7 @@ ckrbrd_hs_dr_pio_test__d2m_s2l(struct hs_dr_pio_test_vars_t * tv_ptr)
ptr_1++;
}
- VRFY((data_ok == TRUE),
+ VRFY((data_ok == TRUE),
"slice read from small to large ds data good(1).");
data_ok = ckrbrd_hs_dr_pio_test__verify_data
@@ -3508,7 +3476,7 @@ ckrbrd_hs_dr_pio_test__d2m_s2l(struct hs_dr_pio_test_vars_t * tv_ptr)
(hbool_t)TRUE
);
- VRFY((data_ok == TRUE),
+ VRFY((data_ok == TRUE),
"slice read from small to large ds data good(2).");
@@ -3527,7 +3495,7 @@ ckrbrd_hs_dr_pio_test__d2m_s2l(struct hs_dr_pio_test_vars_t * tv_ptr)
ptr_1++;
}
- VRFY((data_ok == TRUE),
+ VRFY((data_ok == TRUE),
"slice read from small to large ds data good(3).");
(tv_ptr->tests_run)++;
@@ -3555,31 +3523,27 @@ ckrbrd_hs_dr_pio_test__d2m_s2l(struct hs_dr_pio_test_vars_t * tv_ptr)
/*-------------------------------------------------------------------------
- * Function: ckrbrd_hs_dr_pio_test__m2d_l2s()
+ * Function: ckrbrd_hs_dr_pio_test__m2d_l2s()
*
- * Purpose: Part three of a series of tests of I/O to/from checker
- * board hyperslab selections of different rank in the
- * parallel.
+ * Purpose: Part three of a series of tests of I/O to/from checker
+ * board hyperslab selections of different rank in the
+ * parallel.
*
- * Verify that we can write from memory to file using checker
- * board selections of different rank that
- * H5S_select_shape_same() views as being of the same shape.
+ * Verify that we can write from memory to file using checker
+ * board selections of different rank that
+ * H5S_select_shape_same() views as being of the same shape.
*
- * Do this by writing small_rank - 1 dimensional checker
- * board slices from the in memory large data set to the on
- * disk small cube dataset. After each write, read the
- * slice of the small dataset back from disk, and verify
- * that it contains the expected data. Verify that
- * H5S_select_shape_same() returns true on the memory and
- * file selections.
+ * Do this by writing small_rank - 1 dimensional checker
+ * board slices from the in memory large data set to the on
+ * disk small cube dataset. After each write, read the
+ * slice of the small dataset back from disk, and verify
+ * that it contains the expected data. Verify that
+ * H5S_select_shape_same() returns true on the memory and
+ * file selections.
*
- * Return: void
+ * Return: void
*
- * Programmer: JRM -- 8/15/11
- *
- * Modifications:
- *
- * None.
+ * Programmer: JRM -- 8/15/11
*
*-------------------------------------------------------------------------
*/
@@ -3589,21 +3553,21 @@ ckrbrd_hs_dr_pio_test__d2m_s2l(struct hs_dr_pio_test_vars_t * tv_ptr)
static void
ckrbrd_hs_dr_pio_test__m2d_l2s(struct hs_dr_pio_test_vars_t * tv_ptr)
{
-#if CHECKER_BOARD_HS_DR_PIO_TEST__M2D_L2S__DEBUG
+#if CHECKER_BOARD_HS_DR_PIO_TEST__M2D_L2S__DEBUG
const char *fcnName = "ckrbrd_hs_dr_pio_test__m2d_l2s()";
#endif /* CHECKER_BOARD_HS_DR_PIO_TEST__M2D_L2S__DEBUG */
- hbool_t data_ok = FALSE;
- hbool_t mis_match = FALSE;
- int i, j, k, l;
+ hbool_t data_ok = FALSE;
+ hbool_t mis_match = FALSE;
+ int i, j, k, l;
size_t u;
size_t start_index;
size_t stop_index;
- uint32_t expected_value;
+ uint32_t expected_value;
uint32_t * ptr_1;
- int mpi_rank; /* needed by VRFY */
+ int mpi_rank; /* needed by VRFY */
hsize_t sel_start[PAR_SS_DR_MAX_RANK];
htri_t check; /* Shape comparison return value */
- herr_t ret; /* Generic return value */
+ herr_t ret; /* Generic return value */
/* initialize the local copy of mpi_rank */
mpi_rank = tv_ptr->mpi_rank;
@@ -3614,9 +3578,9 @@ ckrbrd_hs_dr_pio_test__m2d_l2s(struct hs_dr_pio_test_vars_t * tv_ptr)
* H5S_select_shape_same() views as being of the same shape.
*
* Start by writing small_rank - 1 D slices from the in memory large data
- * set to the on disk small dataset. After each write, read the slice of
- * the small dataset back from disk, and verify that it contains the
- * expected data. Verify that H5S_select_shape_same() returns true on
+ * set to the on disk small dataset. After each write, read the slice of
+ * the small dataset back from disk, and verify that it contains the
+ * expected data. Verify that H5S_select_shape_same() returns true on
* the memory and file selections.
*/
@@ -3684,18 +3648,18 @@ ckrbrd_hs_dr_pio_test__m2d_l2s(struct hs_dr_pio_test_vars_t * tv_ptr)
HDmemset(tv_ptr->small_ds_buf_1, 0, sizeof(uint32_t) * tv_ptr->small_ds_size);
-#if CHECKER_BOARD_HS_DR_PIO_TEST__M2D_L2S__DEBUG
- HDfprintf(stdout,
+#if CHECKER_BOARD_HS_DR_PIO_TEST__M2D_L2S__DEBUG
+ HDfprintf(stdout,
"%s writing checker boards selections of slices from big ds to slices of small ds on disk.\n",
fcnName);
#endif /* CHECKER_BOARD_HS_DR_PIO_TEST__M2D_L2S__DEBUG */
/* in serial versions of this test, we loop through all the dimensions
- * of the large data set that don't appear in the small data set.
+ * of the large data set that don't appear in the small data set.
*
- * However, in the parallel version, each process only works with that
- * slice of the large (and small) data set indicated by its rank -- hence
- * we set the most slowly changing index to mpi_rank, and don't itterate
+ * However, in the parallel version, each process only works with that
+ * slice of the large (and small) data set indicated by its rank -- hence
+ * we set the most slowly changing index to mpi_rank, and don't itterate
* over it.
*/
@@ -3709,9 +3673,9 @@ ckrbrd_hs_dr_pio_test__m2d_l2s(struct hs_dr_pio_test_vars_t * tv_ptr)
i = 0;
}
- /* since large_rank is at most PAR_SS_DR_MAX_RANK, no need to
+ /* since large_rank is at most PAR_SS_DR_MAX_RANK, no need to
* loop over it -- either we are setting i to mpi_rank, or
- * we are setting it to zero. It will not change during the
+ * we are setting it to zero. It will not change during the
* test.
*/
@@ -3736,7 +3700,7 @@ ckrbrd_hs_dr_pio_test__m2d_l2s(struct hs_dr_pio_test_vars_t * tv_ptr)
}
do {
- /* since small rank >= 2 and large_rank > small_rank, we
+ /* since small rank >= 2 and large_rank > small_rank, we
* have large_rank >= 3. Since PAR_SS_DR_MAX_RANK == 5
* (baring major re-orgaization), this gives us:
*
@@ -3760,7 +3724,7 @@ ckrbrd_hs_dr_pio_test__m2d_l2s(struct hs_dr_pio_test_vars_t * tv_ptr)
* by the assertions at the head of this function. Thus no
* need for another inner loop.
*/
-
+
/* zero out this rank's slice of the on disk small data set */
ret = H5Dwrite(tv_ptr->small_dataset,
H5T_NATIVE_UINT32,
@@ -3769,7 +3733,7 @@ ckrbrd_hs_dr_pio_test__m2d_l2s(struct hs_dr_pio_test_vars_t * tv_ptr)
tv_ptr->xfer_plist,
tv_ptr->small_ds_buf_2);
VRFY((ret >= 0), "H5Dwrite() zero slice to small ds succeeded.");
-
+
/* select the portion of the in memory large cube from which we
* are going to write data.
*/
@@ -3778,13 +3742,13 @@ ckrbrd_hs_dr_pio_test__m2d_l2s(struct hs_dr_pio_test_vars_t * tv_ptr)
tv_ptr->start[2] = (hsize_t)k;
tv_ptr->start[3] = (hsize_t)l;
tv_ptr->start[4] = 0;
-
+
HDassert((tv_ptr->start[0] == 0)||(0 < tv_ptr->small_ds_offset + 1));
HDassert((tv_ptr->start[1] == 0)||(1 < tv_ptr->small_ds_offset + 1));
HDassert((tv_ptr->start[2] == 0)||(2 < tv_ptr->small_ds_offset + 1));
HDassert((tv_ptr->start[3] == 0)||(3 < tv_ptr->small_ds_offset + 1));
HDassert((tv_ptr->start[4] == 0)||(4 < tv_ptr->small_ds_offset + 1));
-
+
ckrbrd_hs_dr_pio_test__slct_ckrbrd
(
tv_ptr->mpi_rank,
@@ -3795,26 +3759,26 @@ ckrbrd_hs_dr_pio_test__m2d_l2s(struct hs_dr_pio_test_vars_t * tv_ptr)
tv_ptr->small_rank - 1,
tv_ptr->start
);
-
-
+
+
/* verify that H5S_select_shape_same() reports the in
- * memory checkerboard selection of the slice through the
+ * memory checkerboard selection of the slice through the
* large dataset and the checkerboard selection of the process
* slice of the small data set as having the same shape.
*/
check = H5S_select_shape_same_test(tv_ptr->file_small_ds_sid_1,
tv_ptr->mem_large_ds_sid);
VRFY((check == TRUE), "H5S_select_shape_same_test passed.");
-
-
- /* write the checker board selection of the slice from the in
- * memory large data set to the slice of the on disk small
- * dataset.
+
+
+ /* write the checker board selection of the slice from the in
+ * memory large data set to the slice of the on disk small
+ * dataset.
*/
-#if CHECKER_BOARD_HS_DR_PIO_TEST__M2D_L2S__DEBUG
- HDfprintf(stdout, "%s:%d: start = %d %d %d %d %d.\n",
+#if CHECKER_BOARD_HS_DR_PIO_TEST__M2D_L2S__DEBUG
+ HDfprintf(stdout, "%s:%d: start = %d %d %d %d %d.\n",
fcnName, tv_ptr->mpi_rank,
- tv_ptr->start[0], tv_ptr->start[1], tv_ptr->start[2],
+ tv_ptr->start[0], tv_ptr->start[1], tv_ptr->start[2],
tv_ptr->start[3], tv_ptr->start[4]);
HDfprintf(stdout, "%s:%d: mem/file extent dims = %d/%d.\n",
fcnName, tv_ptr->mpi_rank,
@@ -3828,8 +3792,8 @@ ckrbrd_hs_dr_pio_test__m2d_l2s(struct hs_dr_pio_test_vars_t * tv_ptr)
tv_ptr->xfer_plist,
tv_ptr->large_ds_buf_0);
VRFY((ret >= 0), "H5Dwrite() slice to large ds succeeded.");
-
-
+
+
/* read the on disk process slice of the small dataset into memory */
ret = H5Dread(tv_ptr->small_dataset,
H5T_NATIVE_UINT32,
@@ -3838,30 +3802,30 @@ ckrbrd_hs_dr_pio_test__m2d_l2s(struct hs_dr_pio_test_vars_t * tv_ptr)
tv_ptr->xfer_plist,
tv_ptr->small_ds_buf_1);
VRFY((ret >= 0), "H5Dread() slice from small ds succeeded.");
-
-
+
+
/* verify that expected data is retrieved */
-
+
mis_match = FALSE;
-
+
expected_value = (uint32_t)(
- (i * tv_ptr->edge_size * tv_ptr->edge_size *
+ (i * tv_ptr->edge_size * tv_ptr->edge_size *
tv_ptr->edge_size * tv_ptr->edge_size) +
(j * tv_ptr->edge_size * tv_ptr->edge_size * tv_ptr->edge_size) +
(k * tv_ptr->edge_size * tv_ptr->edge_size) +
(l * tv_ptr->edge_size));
-
+
start_index = (size_t)(tv_ptr->mpi_rank) * tv_ptr->small_ds_slice_size;
stop_index = start_index + tv_ptr->small_ds_slice_size - 1;
-
+
HDassert( start_index < stop_index );
HDassert( stop_index <= tv_ptr->small_ds_size );
-
+
data_ok = TRUE;
-
+
ptr_1 = tv_ptr->small_ds_buf_1;
for ( u = 0; u < start_index; u++, ptr_1++ ) {
-
+
if ( *ptr_1 != 0 ) {
data_ok = FALSE;
@@ -3890,7 +3854,7 @@ ckrbrd_hs_dr_pio_test__m2d_l2s(struct hs_dr_pio_test_vars_t * tv_ptr)
}
}
- VRFY((data_ok == TRUE),
+ VRFY((data_ok == TRUE),
"large slice write slice to small slice data good.");
(tv_ptr->tests_run)++;
@@ -3918,31 +3882,27 @@ ckrbrd_hs_dr_pio_test__m2d_l2s(struct hs_dr_pio_test_vars_t * tv_ptr)
/*-------------------------------------------------------------------------
- * Function: ckrbrd_hs_dr_pio_test__m2d_s2l()
- *
- * Purpose: Part four of a series of tests of I/O to/from checker
- * board hyperslab selections of different rank in the parallel.
- *
- * Verify that we can write from memory to file using
- * selections of different rank that H5S_select_shape_same()
- * views as being of the same shape.
+ * Function: ckrbrd_hs_dr_pio_test__m2d_s2l()
*
- * Do this by writing checker board selections of the contents
- * of the process's slice of the in memory small data set to
- * slices of the on disk large data set. After each write,
- * read the process's slice of the large data set back into
- * memory, and verify that it contains the expected data.
+ * Purpose: Part four of a series of tests of I/O to/from checker
+ * board hyperslab selections of different rank in the parallel.
*
- * Verify that H5S_select_shape_same() returns true on the
- * memory and file selections.
+ * Verify that we can write from memory to file using
+ * selections of different rank that H5S_select_shape_same()
+ * views as being of the same shape.
*
- * Return: void
+ * Do this by writing checker board selections of the contents
+ * of the process's slice of the in memory small data set to
+ * slices of the on disk large data set. After each write,
+ * read the process's slice of the large data set back into
+ * memory, and verify that it contains the expected data.
*
- * Programmer: JRM -- 8/15/11
+ * Verify that H5S_select_shape_same() returns true on the
+ * memory and file selections.
*
- * Modifications:
+ * Return: void
*
- * None
+ * Programmer: JRM -- 8/15/11
*
*-------------------------------------------------------------------------
*/
@@ -3952,31 +3912,31 @@ ckrbrd_hs_dr_pio_test__m2d_l2s(struct hs_dr_pio_test_vars_t * tv_ptr)
static void
ckrbrd_hs_dr_pio_test__m2d_s2l(struct hs_dr_pio_test_vars_t * tv_ptr)
{
-#if CHECKER_BOARD_HS_DR_PIO_TEST__M2D_S2L__DEBUG
+#if CHECKER_BOARD_HS_DR_PIO_TEST__M2D_S2L__DEBUG
const char *fcnName = "ckrbrd_hs_dr_pio_test__m2d_s2l()";
#endif /* CONTIG_HS_DR_PIO_TEST__M2D_S2L__DEBUG */
- hbool_t data_ok = FALSE;
- hbool_t mis_match = FALSE;
- int i, j, k, l;
+ hbool_t data_ok = FALSE;
+ hbool_t mis_match = FALSE;
+ int i, j, k, l;
size_t u;
size_t start_index;
size_t stop_index;
- uint32_t expected_value;
+ uint32_t expected_value;
uint32_t * ptr_1;
- int mpi_rank; /* needed by VRFY */
+ int mpi_rank; /* needed by VRFY */
hsize_t sel_start[PAR_SS_DR_MAX_RANK];
htri_t check; /* Shape comparison return value */
- herr_t ret; /* Generic return value */
+ herr_t ret; /* Generic return value */
/* initialize the local copy of mpi_rank */
mpi_rank = tv_ptr->mpi_rank;
- /* Now write the contents of the process's slice of the in memory
- * small data set to slices of the on disk large data set. After
+ /* Now write the contents of the process's slice of the in memory
+ * small data set to slices of the on disk large data set. After
* each write, read the process's slice of the large data set back
- * into memory, and verify that it contains the expected data.
- * Verify that H5S_select_shape_same() returns true on the memory
+ * into memory, and verify that it contains the expected data.
+ * Verify that H5S_select_shape_same() returns true on the memory
* and file selections.
*/
@@ -4009,7 +3969,7 @@ ckrbrd_hs_dr_pio_test__m2d_s2l(struct hs_dr_pio_test_vars_t * tv_ptr)
tv_ptr->block);
VRFY((ret >= 0), "H5Sselect_hyperslab(tv_ptr->mem_large_ds_sid, set) suceeded");
- /* setup a checkerboard selection of the slice of the in memory small
+ /* setup a checkerboard selection of the slice of the in memory small
* data set associated with the process's mpi rank.
*/
@@ -4025,7 +3985,7 @@ ckrbrd_hs_dr_pio_test__m2d_s2l(struct hs_dr_pio_test_vars_t * tv_ptr)
sel_start);
/* set up start, stride, count, and block -- note that we will
- * change start[] so as to write checkerboard selections of slices
+ * change start[] so as to write checkerboard selections of slices
* of the small data set to slices of the large data set.
*/
for ( i = 0; i < PAR_SS_DR_MAX_RANK; i++ ) {
@@ -4047,7 +4007,7 @@ ckrbrd_hs_dr_pio_test__m2d_s2l(struct hs_dr_pio_test_vars_t * tv_ptr)
HDmemset(tv_ptr->large_ds_buf_1, 0, sizeof(uint32_t) * tv_ptr->large_ds_size);
#if CHECKER_BOARD_HS_DR_PIO_TEST__M2D_S2L__DEBUG
- HDfprintf(stdout,
+ HDfprintf(stdout,
"%s writing process checkerboard selections of slices of small ds to process slices of large ds on disk.\n",
fcnName);
#endif /* CHECKER_BOARD_HS_DR_PIO_TEST__M2D_S2L__DEBUG */
@@ -4061,9 +4021,9 @@ ckrbrd_hs_dr_pio_test__m2d_s2l(struct hs_dr_pio_test_vars_t * tv_ptr)
i = 0;
}
- /* since large_rank is at most PAR_SS_DR_MAX_RANK, no need to
+ /* since large_rank is at most PAR_SS_DR_MAX_RANK, no need to
* loop over it -- either we are setting i to mpi_rank, or
- * we are setting it to zero. It will not change during the
+ * we are setting it to zero. It will not change during the
* test.
*/
@@ -4087,7 +4047,7 @@ ckrbrd_hs_dr_pio_test__m2d_s2l(struct hs_dr_pio_test_vars_t * tv_ptr)
}
do {
- /* since small rank >= 2 and large_rank > small_rank, we
+ /* since small rank >= 2 and large_rank > small_rank, we
* have large_rank >= 3. Since PAR_SS_DR_MAX_RANK == 5
* (baring major re-orgaization), this gives us:
*
@@ -4162,13 +4122,13 @@ ckrbrd_hs_dr_pio_test__m2d_s2l(struct hs_dr_pio_test_vars_t * tv_ptr)
VRFY((check == TRUE), "H5S_select_shape_same_test passed");
- /* write the small data set slice from memory to the
- * target slice of the disk data set
+ /* write the small data set slice from memory to the
+ * target slice of the disk data set
*/
-#if CHECKER_BOARD_HS_DR_PIO_TEST__M2D_S2L__DEBUG
- HDfprintf(stdout, "%s:%d: start = %d %d %d %d %d.\n",
+#if CHECKER_BOARD_HS_DR_PIO_TEST__M2D_S2L__DEBUG
+ HDfprintf(stdout, "%s:%d: start = %d %d %d %d %d.\n",
fcnName, tv_ptr->mpi_rank,
- tv_ptr->start[0], tv_ptr->start[1], tv_ptr->start[2],
+ tv_ptr->start[0], tv_ptr->start[1], tv_ptr->start[2],
tv_ptr->start[3], tv_ptr->start[4]);
HDfprintf(stdout, "%s:%d: mem/file extent dims = %d/%d.\n",
fcnName, tv_ptr->mpi_rank,
@@ -4181,11 +4141,11 @@ ckrbrd_hs_dr_pio_test__m2d_s2l(struct hs_dr_pio_test_vars_t * tv_ptr)
tv_ptr->file_large_ds_sid_1,
tv_ptr->xfer_plist,
tv_ptr->small_ds_buf_0);
- VRFY((ret != FAIL),
+ VRFY((ret != FAIL),
"H5Dwrite of small ds slice to large ds succeeded");
- /* read this processes slice on the on disk large
+ /* read this processes slice on the on disk large
* data set into memory.
*/
@@ -4195,18 +4155,18 @@ ckrbrd_hs_dr_pio_test__m2d_s2l(struct hs_dr_pio_test_vars_t * tv_ptr)
tv_ptr->file_large_ds_sid_0,
tv_ptr->xfer_plist,
tv_ptr->large_ds_buf_1);
- VRFY((ret != FAIL),
+ VRFY((ret != FAIL),
"H5Dread() of process slice of large ds succeeded");
/* verify that the expected data and only the
* expected data was read.
*/
- expected_value =
+ expected_value =
(uint32_t)((size_t)(tv_ptr->mpi_rank) * tv_ptr->small_ds_slice_size);
start_index = (size_t)
- ((i * tv_ptr->edge_size * tv_ptr->edge_size *
+ ((i * tv_ptr->edge_size * tv_ptr->edge_size *
tv_ptr->edge_size * tv_ptr->edge_size) +
(j * tv_ptr->edge_size * tv_ptr->edge_size * tv_ptr->edge_size) +
(k * tv_ptr->edge_size * tv_ptr->edge_size) +
@@ -4252,7 +4212,7 @@ ckrbrd_hs_dr_pio_test__m2d_s2l(struct hs_dr_pio_test_vars_t * tv_ptr)
}
}
- VRFY((data_ok == TRUE),
+ VRFY((data_ok == TRUE),
"small ds cb slice write to large ds slice data good.");
(tv_ptr->tests_run)++;
@@ -4280,22 +4240,22 @@ ckrbrd_hs_dr_pio_test__m2d_s2l(struct hs_dr_pio_test_vars_t * tv_ptr)
/*-------------------------------------------------------------------------
- * Function: ckrbrd_hs_dr_pio_test__run_test()
+ * Function: ckrbrd_hs_dr_pio_test__run_test()
*
- * Purpose: Test I/O to/from checkerboard selections of hyperslabs of
- * different rank in the parallel.
+ * Purpose: Test I/O to/from checkerboard selections of hyperslabs of
+ * different rank in the parallel.
*
- * Return: void
+ * Return: void
*
- * Programmer: JRM -- 10/10/09
+ * Programmer: JRM -- 10/10/09
*
* Modifications:
*
- * JRM -- 9/16/10
- * Added the express_test parameter. Use it to control
- * whether we set an alignment, and whether we allocate
- * chunks such that no two processes will normally touch
- * the same chunk.
+ * JRM -- 9/16/10
+ * Added the express_test parameter. Use it to control
+ * whether we set an alignment, and whether we allocate
+ * chunks such that no two processes will normally touch
+ * the same chunk.
*
*-------------------------------------------------------------------------
*/
@@ -4322,10 +4282,10 @@ ckrbrd_hs_dr_pio_test__run_test(const int test_num,
#if CKRBRD_HS_DR_PIO_TEST__RUN_TEST__DEBUG
const char *fcnName = "ckrbrd_hs_dr_pio_test__run_test()";
#endif /* CKRBRD_HS_DR_PIO_TEST__RUN_TEST__DEBUG */
- int mpi_rank; /* needed by VRFY */
- struct hs_dr_pio_test_vars_t test_vars =
+ int mpi_rank; /* needed by VRFY */
+ struct hs_dr_pio_test_vars_t test_vars =
{
- /* int mpi_size = */ -1,
+ /* int mpi_size = */ -1,
/* int mpi_rank = */ -1,
/* MPI_Comm mpi_comm = */ MPI_COMM_NULL,
/* MPI_Inf mpi_info = */ MPI_INFO_NULL,
@@ -4341,7 +4301,7 @@ ckrbrd_hs_dr_pio_test__run_test(const int test_num,
/* uint32_t * small_ds_buf_2 = */ NULL,
/* uint32_t * small_ds_slice_buf = */ NULL,
/* uint32_t * large_ds_buf_0 = */ NULL,
- /* uint32_t * large_ds_buf_1 = */ NULL,
+ /* uint32_t * large_ds_buf_1 = */ NULL,
/* uint32_t * large_ds_buf_2 = */ NULL,
/* uint32_t * large_ds_slice_buf = */ NULL,
/* int small_ds_offset = */ -1,
@@ -4378,17 +4338,17 @@ ckrbrd_hs_dr_pio_test__run_test(const int test_num,
/* hsize_t * stride_ptr = */ NULL,
/* hsize_t * count_ptr = */ NULL,
/* hsize_t * block_ptr = */ NULL,
- /* int skips = */ 0,
- /* int max_skips = */ 0,
+ /* int skips = */ 0,
+ /* int max_skips = */ 0,
/* int64_t total_tests = */ 0,
/* int64_t tests_run = */ 0,
/* int64_t tests_skipped = */ 0
};
struct hs_dr_pio_test_vars_t * tv_ptr = &test_vars;
- hs_dr_pio_test__setup(test_num, edge_size, checker_edge_size,
- chunk_edge_size, small_rank, large_rank,
- use_collective_io, dset_type, express_test,
+ hs_dr_pio_test__setup(test_num, edge_size, checker_edge_size,
+ chunk_edge_size, small_rank, large_rank,
+ use_collective_io, dset_type, express_test,
tv_ptr);
@@ -4414,9 +4374,9 @@ ckrbrd_hs_dr_pio_test__run_test(const int test_num,
* of different rank that H5S_select_shape_same() views as being of the
* same shape.
*
- * Start by reading a (small_rank - 1)-D slice from this processes slice
- * of the on disk large data set, and verifying that the data read is
- * correct. Verify that H5S_select_shape_same() returns true on the
+ * Start by reading a (small_rank - 1)-D slice from this processes slice
+ * of the on disk large data set, and verifying that the data read is
+ * correct. Verify that H5S_select_shape_same() returns true on the
* memory and file selections.
*
* The first step is to set up the needed checker board selection in the
@@ -4426,8 +4386,8 @@ ckrbrd_hs_dr_pio_test__run_test(const int test_num,
ckrbrd_hs_dr_pio_test__d2m_l2s(tv_ptr);
- /* similarly, read slices of the on disk small data set into slices
- * through the in memory large data set, and verify that the correct
+ /* similarly, read slices of the on disk small data set into slices
+ * through the in memory large data set, and verify that the correct
* data (and only the correct data) is read.
*/
@@ -4439,20 +4399,20 @@ ckrbrd_hs_dr_pio_test__run_test(const int test_num,
* H5S_select_shape_same() views as being of the same shape.
*
* Start by writing small_rank - 1 D slices from the in memory large data
- * set to the on disk small dataset. After each write, read the slice of
- * the small dataset back from disk, and verify that it contains the
- * expected data. Verify that H5S_select_shape_same() returns true on
+ * set to the on disk small dataset. After each write, read the slice of
+ * the small dataset back from disk, and verify that it contains the
+ * expected data. Verify that H5S_select_shape_same() returns true on
* the memory and file selections.
*/
ckrbrd_hs_dr_pio_test__m2d_l2s(tv_ptr);
- /* Now write the contents of the process's slice of the in memory
- * small data set to slices of the on disk large data set. After
+ /* Now write the contents of the process's slice of the in memory
+ * small data set to slices of the on disk large data set. After
* each write, read the process's slice of the large data set back
- * into memory, and verify that it contains the expected data.
- * Verify that H5S_select_shape_same() returns true on the memory
+ * into memory, and verify that it contains the expected data.
+ * Verify that H5S_select_shape_same() returns true on the memory
* and file selections.
*/
@@ -4461,8 +4421,8 @@ ckrbrd_hs_dr_pio_test__run_test(const int test_num,
#if CKRBRD_HS_DR_PIO_TEST__RUN_TEST__DEBUG
if ( MAINPROCESS ) {
- HDfprintf(stdout,
- "test %d: Subtests complete -- tests run/skipped/total = %lld/%lld/%lld.\n",
+ HDfprintf(stdout,
+ "test %d: Subtests complete -- tests run/skipped/total = %lld/%lld/%lld.\n",
test_num, (long long)(tv_ptr->tests_run), (long long)(tv_ptr->tests_skipped),
(long long)(tv_ptr->total_tests));
}
@@ -4487,28 +4447,28 @@ ckrbrd_hs_dr_pio_test__run_test(const int test_num,
/*-------------------------------------------------------------------------
- * Function: ckrbrd_hs_dr_pio_test()
+ * Function: ckrbrd_hs_dr_pio_test()
*
- * Purpose: Test I/O to/from hyperslab selections of different rank in
- * the parallel case.
+ * Purpose: Test I/O to/from hyperslab selections of different rank in
+ * the parallel case.
*
- * Return: void
+ * Return: void
*
- * Programmer: JRM -- 9/18/09
+ * Programmer: JRM -- 9/18/09
*
* Modifications:
*
- * Modified function to take a sample of the run times
- * of the different tests, and skip some of them if
- * run times are too long.
+ * Modified function to take a sample of the run times
+ * of the different tests, and skip some of them if
+ * run times are too long.
*
- * We need to do this because Lustre runns very slowly
- * if two or more processes are banging on the same
- * block of memory.
- * JRM -- 9/10/10
- * Break this one big test into 4 smaller tests according
- * to {independent,collective}x{contigous,chunked} datasets.
- * AKC -- 2010/01/17
+ * We need to do this because Lustre runns very slowly
+ * if two or more processes are banging on the same
+ * block of memory.
+ * JRM -- 9/10/10
+ * Break this one big test into 4 smaller tests according
+ * to {independent,collective}x{contigous,chunked} datasets.
+ * AKC -- 2010/01/17
*
*-------------------------------------------------------------------------
*/
@@ -4518,16 +4478,16 @@ ckrbrd_hs_dr_pio_test(ShapeSameTestMethods sstest_type)
{
int express_test;
int local_express_test;
- int mpi_size = -1;
+ int mpi_size = -1;
int mpi_rank = -1;
- int test_num = 0;
- int edge_size;
+ int test_num = 0;
+ int edge_size;
int checker_edge_size = 3;
- int chunk_edge_size = 0;
- int small_rank = 3;
- int large_rank = 4;
- int mpi_result;
- hid_t dset_type = H5T_NATIVE_UINT;
+ int chunk_edge_size = 0;
+ int small_rank = 3;
+ int large_rank = 4;
+ int mpi_result;
+ hid_t dset_type = H5T_NATIVE_UINT;
int skips = 0;
int max_skips = 0;
/* The following table list the number of sub-tests skipped between
@@ -4566,13 +4526,13 @@ ckrbrd_hs_dr_pio_test(ShapeSameTestMethods sstest_type)
max_skips = max_skips_tbl[local_express_test];
}
-#if 0
+#if 0
{
int DebugWait = 1;
-
+
while (DebugWait) ;
}
-#endif
+#endif
for ( large_rank = 3; large_rank <= PAR_SS_DR_MAX_RANK; large_rank++ ) {
@@ -4702,15 +4662,15 @@ int dim0;
int dim1;
int chunkdim0;
int chunkdim1;
-int nerrors = 0; /* errors count */
-int ndatasets = 300; /* number of datasets to create*/
+int nerrors = 0; /* errors count */
+int ndatasets = 300; /* number of datasets to create*/
int ngroups = 512; /* number of groups to create in root
* group. */
-int facc_type = FACC_MPIO; /*Test file access type */
+int facc_type = FACC_MPIO; /*Test file access type */
int dxfer_coll_type = DXFER_COLLECTIVE_IO;
-H5E_auto2_t old_func; /* previous error handler */
-void *old_client_data; /* previous error handler arg.*/
+H5E_auto2_t old_func; /* previous error handler */
+void *old_client_data; /* previous error handler arg.*/
/* other option flags */
@@ -4722,10 +4682,10 @@ void *old_client_data; /* previous error handler arg.*/
#define NFILENAME 2
#define PARATESTFILE filenames[0]
const char *FILENAME[NFILENAME]={
- "ShapeSameTest",
- NULL};
-char filenames[NFILENAME][PATH_MAX];
-hid_t fapl; /* file access property list */
+ "ShapeSameTest",
+ NULL};
+char filenames[NFILENAME][PATH_MAX];
+hid_t fapl; /* file access property list */
#ifdef USE_PAUSE
/* pause the process for a moment to allow debugger to attach if desired. */
@@ -4738,7 +4698,7 @@ void pause_proc(void)
{
int pid;
- h5_stat_t statbuf;
+ h5_stat_t statbuf;
char greenlight[] = "go";
int maxloop = 10;
int loops = 0;
@@ -4755,15 +4715,15 @@ void pause_proc(void)
MPI_Get_processor_name(mpi_name, &mpi_namelen);
if (MAINPROCESS)
- while ((HDstat(greenlight, &statbuf) == -1) && loops < maxloop){
- if (!loops++){
- printf("Proc %d (%*s, %d): to debug, attach %d\n",
- mpi_rank, mpi_namelen, mpi_name, pid, pid);
- }
- printf("waiting(%ds) for file %s ...\n", time_int, greenlight);
- fflush(stdout);
- sleep(time_int);
- }
+ while ((HDstat(greenlight, &statbuf) == -1) && loops < maxloop){
+ if (!loops++){
+ printf("Proc %d (%*s, %d): to debug, attach %d\n",
+ mpi_rank, mpi_namelen, mpi_name, pid, pid);
+ }
+ printf("waiting(%ds) for file %s ...\n", time_int, greenlight);
+ fflush(stdout);
+ HDsleep(time_int);
+ }
MPI_Barrier(MPI_COMM_WORLD);
}
@@ -4775,7 +4735,7 @@ int MPI_Init(int *argc, char ***argv)
pause_proc();
return (ret_code);
}
-#endif /* USE_PAUSE */
+#endif /* USE_PAUSE */
/*
@@ -4785,15 +4745,15 @@ static void
usage(void)
{
printf(" [-r] [-w] [-m<n_datasets>] [-n<n_groups>] "
- "[-o] [-f <prefix>] [-d <dim0> <dim1>]\n");
+ "[-o] [-f <prefix>] [-d <dim0> <dim1>]\n");
printf("\t-m<n_datasets>"
- "\tset number of datasets for the multiple dataset test\n");
+ "\tset number of datasets for the multiple dataset test\n");
printf("\t-n<n_groups>"
"\tset number of groups for the multiple group test\n");
printf("\t-f <prefix>\tfilename prefix\n");
printf("\t-2\t\tuse Split-file together with MPIO\n");
printf("\t-d <factor0> <factor1>\tdataset dimensions factors. Defaults (%d,%d)\n",
- ROW_FACTOR, COL_FACTOR);
+ ROW_FACTOR, COL_FACTOR);
printf("\t-c <dim0> <dim1>\tdataset chunk dimensions. Defaults (dim0/10,dim1/10)\n");
printf("\n");
}
@@ -4805,7 +4765,7 @@ usage(void)
static int
parse_options(int argc, char **argv)
{
- int mpi_size, mpi_rank; /* mpi variables */
+ int mpi_size, mpi_rank; /* mpi variables */
MPI_Comm_size(MPI_COMM_WORLD, &mpi_size);
MPI_Comm_rank(MPI_COMM_WORLD, &mpi_rank);
@@ -4816,107 +4776,107 @@ parse_options(int argc, char **argv)
chunkdim1 = (dim1+9)/10;
while (--argc){
- if (**(++argv) != '-'){
- break;
- }else{
- switch(*(*argv+1)){
- case 'm': ndatasets = atoi((*argv+1)+1);
- if (ndatasets < 0){
- nerrors++;
- return(1);
- }
- break;
- case 'n': ngroups = atoi((*argv+1)+1);
- if (ngroups < 0){
+ if (**(++argv) != '-'){
+ break;
+ }else{
+ switch(*(*argv+1)){
+ case 'm': ndatasets = atoi((*argv+1)+1);
+ if (ndatasets < 0){
+ nerrors++;
+ return(1);
+ }
+ break;
+ case 'n': ngroups = atoi((*argv+1)+1);
+ if (ngroups < 0){
nerrors++;
return(1);
- }
+ }
break;
- case 'f': if (--argc < 1) {
- nerrors++;
- return(1);
- }
- if (**(++argv) == '-') {
- nerrors++;
- return(1);
- }
- paraprefix = *argv;
- break;
- case 'i': /* Collective MPI-IO access with independent IO */
- dxfer_coll_type = DXFER_INDEPENDENT_IO;
- break;
- case '2': /* Use the split-file driver with MPIO access */
- /* Can use $HDF5_METAPREFIX to define the */
- /* meta-file-prefix. */
- facc_type = FACC_MPIO | FACC_SPLIT;
- break;
- case 'd': /* dimensizes */
- if (--argc < 2){
- nerrors++;
- return(1);
- }
- dim0 = atoi(*(++argv))*mpi_size;
- argc--;
- dim1 = atoi(*(++argv))*mpi_size;
- /* set default chunkdim sizes too */
- chunkdim0 = (dim0+9)/10;
- chunkdim1 = (dim1+9)/10;
- break;
- case 'c': /* chunk dimensions */
- if (--argc < 2){
- nerrors++;
- return(1);
- }
- chunkdim0 = atoi(*(++argv));
- argc--;
- chunkdim1 = atoi(*(++argv));
- break;
- case 'h': /* print help message--return with nerrors set */
- return(1);
- default: printf("Illegal option(%s)\n", *argv);
- nerrors++;
- return(1);
- }
- }
+ case 'f': if (--argc < 1) {
+ nerrors++;
+ return(1);
+ }
+ if (**(++argv) == '-') {
+ nerrors++;
+ return(1);
+ }
+ paraprefix = *argv;
+ break;
+ case 'i': /* Collective MPI-IO access with independent IO */
+ dxfer_coll_type = DXFER_INDEPENDENT_IO;
+ break;
+ case '2': /* Use the split-file driver with MPIO access */
+ /* Can use $HDF5_METAPREFIX to define the */
+ /* meta-file-prefix. */
+ facc_type = FACC_MPIO | FACC_SPLIT;
+ break;
+ case 'd': /* dimensizes */
+ if (--argc < 2){
+ nerrors++;
+ return(1);
+ }
+ dim0 = atoi(*(++argv))*mpi_size;
+ argc--;
+ dim1 = atoi(*(++argv))*mpi_size;
+ /* set default chunkdim sizes too */
+ chunkdim0 = (dim0+9)/10;
+ chunkdim1 = (dim1+9)/10;
+ break;
+ case 'c': /* chunk dimensions */
+ if (--argc < 2){
+ nerrors++;
+ return(1);
+ }
+ chunkdim0 = atoi(*(++argv));
+ argc--;
+ chunkdim1 = atoi(*(++argv));
+ break;
+ case 'h': /* print help message--return with nerrors set */
+ return(1);
+ default: printf("Illegal option(%s)\n", *argv);
+ nerrors++;
+ return(1);
+ }
+ }
} /*while*/
/* check validity of dimension and chunk sizes */
if (dim0 <= 0 || dim1 <= 0){
- printf("Illegal dim sizes (%d, %d)\n", dim0, dim1);
- nerrors++;
- return(1);
+ printf("Illegal dim sizes (%d, %d)\n", dim0, dim1);
+ nerrors++;
+ return(1);
}
if (chunkdim0 <= 0 || chunkdim1 <= 0){
- printf("Illegal chunkdim sizes (%d, %d)\n", chunkdim0, chunkdim1);
- nerrors++;
- return(1);
+ printf("Illegal chunkdim sizes (%d, %d)\n", chunkdim0, chunkdim1);
+ nerrors++;
+ return(1);
}
/* Make sure datasets can be divided into equal portions by the processes */
if ((dim0 % mpi_size) || (dim1 % mpi_size)){
- if (MAINPROCESS)
- printf("dim0(%d) and dim1(%d) must be multiples of processes(%d)\n",
- dim0, dim1, mpi_size);
- nerrors++;
- return(1);
+ if (MAINPROCESS)
+ printf("dim0(%d) and dim1(%d) must be multiples of processes(%d)\n",
+ dim0, dim1, mpi_size);
+ nerrors++;
+ return(1);
}
/* compose the test filenames */
{
- int i, n;
-
- n = sizeof(FILENAME)/sizeof(FILENAME[0]) - 1; /* exclude the NULL */
-
- for (i=0; i < n; i++)
- if (h5_fixname(FILENAME[i],fapl,filenames[i],sizeof(filenames[i]))
- == NULL){
- printf("h5_fixname failed\n");
- nerrors++;
- return(1);
- }
- printf("Test filenames are:\n");
- for (i=0; i < n; i++)
- printf(" %s\n", filenames[i]);
+ int i, n;
+
+ n = sizeof(FILENAME)/sizeof(FILENAME[0]) - 1; /* exclude the NULL */
+
+ for (i=0; i < n; i++)
+ if (h5_fixname(FILENAME[i],fapl,filenames[i],sizeof(filenames[i]))
+ == NULL){
+ printf("h5_fixname failed\n");
+ nerrors++;
+ return(1);
+ }
+ printf("Test filenames are:\n");
+ for (i=0; i < n; i++)
+ printf(" %s\n", filenames[i]);
}
return(0);
@@ -4931,7 +4891,7 @@ create_faccess_plist(MPI_Comm comm, MPI_Info info, int l_facc_type)
{
hid_t ret_pl = -1;
herr_t ret; /* generic return value */
- int mpi_rank; /* mpi variables */
+ int mpi_rank; /* mpi variables */
/* need the rank for error checking macros */
MPI_Comm_rank(MPI_COMM_WORLD, &mpi_rank);
@@ -4940,32 +4900,32 @@ create_faccess_plist(MPI_Comm comm, MPI_Info info, int l_facc_type)
VRFY((ret_pl >= 0), "H5P_FILE_ACCESS");
if (l_facc_type == FACC_DEFAULT)
- return (ret_pl);
+ return (ret_pl);
if (l_facc_type == FACC_MPIO){
- /* set Parallel access with communicator */
- ret = H5Pset_fapl_mpio(ret_pl, comm, info);
- VRFY((ret >= 0), "");
- return(ret_pl);
+ /* set Parallel access with communicator */
+ ret = H5Pset_fapl_mpio(ret_pl, comm, info);
+ VRFY((ret >= 0), "");
+ return(ret_pl);
}
if (l_facc_type == (FACC_MPIO | FACC_SPLIT)){
- hid_t mpio_pl;
-
- mpio_pl = H5Pcreate (H5P_FILE_ACCESS);
- VRFY((mpio_pl >= 0), "");
- /* set Parallel access with communicator */
- ret = H5Pset_fapl_mpio(mpio_pl, comm, info);
- VRFY((ret >= 0), "");
-
- /* setup file access template */
- ret_pl = H5Pcreate (H5P_FILE_ACCESS);
- VRFY((ret_pl >= 0), "");
- /* set Parallel access with communicator */
- ret = H5Pset_fapl_split(ret_pl, ".meta", mpio_pl, ".raw", mpio_pl);
- VRFY((ret >= 0), "H5Pset_fapl_split succeeded");
- H5Pclose(mpio_pl);
- return(ret_pl);
+ hid_t mpio_pl;
+
+ mpio_pl = H5Pcreate (H5P_FILE_ACCESS);
+ VRFY((mpio_pl >= 0), "");
+ /* set Parallel access with communicator */
+ ret = H5Pset_fapl_mpio(mpio_pl, comm, info);
+ VRFY((ret >= 0), "");
+
+ /* setup file access template */
+ ret_pl = H5Pcreate (H5P_FILE_ACCESS);
+ VRFY((ret_pl >= 0), "");
+ /* set Parallel access with communicator */
+ ret = H5Pset_fapl_split(ret_pl, ".meta", mpio_pl, ".raw", mpio_pl);
+ VRFY((ret >= 0), "H5Pset_fapl_split succeeded");
+ H5Pclose(mpio_pl);
+ return(ret_pl);
}
/* unknown file access types */
@@ -5033,7 +4993,7 @@ sschecker4(void)
int main(int argc, char **argv)
{
- int mpi_size, mpi_rank; /* mpi variables */
+ int mpi_size, mpi_rank; /* mpi variables */
#ifndef H5_HAVE_WIN32_API
/* Un-buffer the stdout and stderr */
@@ -5049,10 +5009,10 @@ int main(int argc, char **argv)
dim1 = COL_FACTOR*mpi_size;
if (MAINPROCESS){
- printf("===================================\n");
- printf("Shape Same Tests Start\n");
- printf(" express_test = %d.\n", GetTestExpress());
- printf("===================================\n");
+ printf("===================================\n");
+ printf("Shape Same Tests Start\n");
+ printf(" express_test = %d.\n", GetTestExpress());
+ printf("===================================\n");
}
/* Attempt to turn off atexit post processing so that in case errors
@@ -5061,7 +5021,7 @@ int main(int argc, char **argv)
* calls. By then, MPI calls may not work.
*/
if (H5dont_atexit() < 0){
- printf("%d: Failed to turn off atexit processing. Continue.\n", mpi_rank);
+ printf("%d: Failed to turn off atexit processing. Continue.\n", mpi_rank);
};
H5open();
h5_show_hostname();
@@ -5070,26 +5030,24 @@ int main(int argc, char **argv)
TestInit(argv[0], usage, parse_options);
/* Shape Same tests using contigous hyperslab */
-#if 1
AddTest("sscontig1", sscontig1, NULL,
- "Shape Same, contigous hyperslab, ind IO, contig datasets", PARATESTFILE);
+ "Cntg hslab, ind IO, cntg dsets", PARATESTFILE);
AddTest("sscontig2", sscontig2, NULL,
- "Shape Same, contigous hyperslab, col IO, contig datasets", PARATESTFILE);
+ "Cntg hslab, col IO, cntg dsets", PARATESTFILE);
AddTest("sscontig3", sscontig3, NULL,
- "Shape Same, contigous hyperslab, ind IO, chunked datasets", PARATESTFILE);
+ "Cntg hslab, ind IO, chnk dsets", PARATESTFILE);
AddTest("sscontig4", sscontig4, NULL,
- "Shape Same, contigous hyperslab, col IO, chunked datasets", PARATESTFILE);
-#endif
+ "Cntg hslab, col IO, chnk dsets", PARATESTFILE);
/* Shape Same tests using checker board hyperslab */
AddTest("sschecker1", sschecker1, NULL,
- "Shape Same, checker hyperslab, ind IO, contig datasets", PARATESTFILE);
+ "Check hslab, ind IO, cntg dsets", PARATESTFILE);
AddTest("sschecker2", sschecker2, NULL,
- "Shape Same, checker hyperslab, col IO, contig datasets", PARATESTFILE);
+ "Check hslab, col IO, cntg dsets", PARATESTFILE);
AddTest("sschecker3", sschecker3, NULL,
- "Shape Same, checker hyperslab, ind IO, chunked datasets", PARATESTFILE);
+ "Check hslab, ind IO, chnk dsets", PARATESTFILE);
AddTest("sschecker4", sschecker4, NULL,
- "Shape Same, checker hyperslab, col IO, chunked datasets", PARATESTFILE);
+ "Check hslab, col IO, chnk dsets", PARATESTFILE);
/* Display testing information */
TestInfo(argv[0]);
@@ -5102,9 +5060,9 @@ int main(int argc, char **argv)
TestParseCmdLine(argc, argv);
if (dxfer_coll_type == DXFER_INDEPENDENT_IO && MAINPROCESS){
- printf("===================================\n"
- " Using Independent I/O with file set view to replace collective I/O \n"
- "===================================\n");
+ printf("===================================\n"
+ " Using Independent I/O with file set view to replace collective I/O \n"
+ "===================================\n");
}
@@ -5129,20 +5087,27 @@ int main(int argc, char **argv)
{
int temp;
MPI_Allreduce(&nerrors, &temp, 1, MPI_INT, MPI_MAX, MPI_COMM_WORLD);
- nerrors=temp;
+ nerrors=temp;
}
- if (MAINPROCESS){ /* only process 0 reports */
- printf("===================================\n");
- if (nerrors)
- printf("***Shape Same tests detected %d errors***\n", nerrors);
- else
- printf("Shape Same tests finished with no errors\n");
- printf("===================================\n");
+ if (MAINPROCESS){ /* only process 0 reports */
+ printf("===================================\n");
+ if (nerrors)
+ printf("***Shape Same tests detected %d errors***\n", nerrors);
+ else
+ printf("Shape Same tests finished with no errors\n");
+ printf("===================================\n");
}
+ /* close HDF5 library */
+ H5close();
+
+ /* Release test infrastructure */
+ TestShutdown();
+
MPI_Finalize();
/* cannot just return (nerrors) because exit code is limited to 1byte */
return(nerrors!=0);
}
+
diff --git a/testpar/t_span_tree.c b/testpar/t_span_tree.c
index 53ce7b1..960bedc 100644
--- a/testpar/t_span_tree.c
+++ b/testpar/t_span_tree.c
@@ -23,12 +23,12 @@
2) We will read two datasets with the same hyperslab selection settings,
1. independent read to read independent output,
independent read to read collecive output,
- Compare the result,
- If the result is the same, then collective write succeeds.
+ Compare the result,
+ If the result is the same, then collective write succeeds.
2. collective read to read independent output,
independent read to read independent output,
- Compare the result,
- If the result is the same, then collective read succeeds.
+ Compare the result,
+ If the result is the same, then collective read succeeds.
*/
@@ -42,19 +42,17 @@ static void coll_read_test(int chunk_factor);
/*-------------------------------------------------------------------------
- * Function: coll_irregular_cont_write
+ * Function: coll_irregular_cont_write
*
- * Purpose: Wrapper to test the collectively irregular hyperslab write in
+ * Purpose: Wrapper to test the collectively irregular hyperslab write in
contiguous storage
*
- * Return: Success: 0
+ * Return: Success: 0
*
- * Failure: -1
+ * Failure: -1
*
- * Programmer: Unknown
- * Dec 2nd, 2004
- *
- * Modifications:
+ * Programmer: Unknown
+ * Dec 2nd, 2004
*
*-------------------------------------------------------------------------
*/
@@ -69,19 +67,17 @@ coll_irregular_cont_write(void)
/*-------------------------------------------------------------------------
- * Function: coll_irregular_cont_read
+ * Function: coll_irregular_cont_read
*
- * Purpose: Wrapper to test the collectively irregular hyperslab read in
+ * Purpose: Wrapper to test the collectively irregular hyperslab read in
contiguous storage
*
- * Return: Success: 0
- *
- * Failure: -1
+ * Return: Success: 0
*
- * Programmer: Unknown
- * Dec 2nd, 2004
+ * Failure: -1
*
- * Modifications:
+ * Programmer: Unknown
+ * Dec 2nd, 2004
*
*-------------------------------------------------------------------------
*/
@@ -95,19 +91,17 @@ coll_irregular_cont_read(void)
/*-------------------------------------------------------------------------
- * Function: coll_irregular_simple_chunk_write
+ * Function: coll_irregular_simple_chunk_write
*
- * Purpose: Wrapper to test the collectively irregular hyperslab write in
+ * Purpose: Wrapper to test the collectively irregular hyperslab write in
chunk storage(1 chunk)
*
- * Return: Success: 0
- *
- * Failure: -1
+ * Return: Success: 0
*
- * Programmer: Unknown
- * Dec 2nd, 2004
+ * Failure: -1
*
- * Modifications:
+ * Programmer: Unknown
+ * Dec 2nd, 2004
*
*-------------------------------------------------------------------------
*/
@@ -122,19 +116,17 @@ coll_irregular_simple_chunk_write(void)
/*-------------------------------------------------------------------------
- * Function: coll_irregular_simple_chunk_read
+ * Function: coll_irregular_simple_chunk_read
*
- * Purpose: Wrapper to test the collectively irregular hyperslab read in chunk
+ * Purpose: Wrapper to test the collectively irregular hyperslab read in chunk
storage(1 chunk)
*
- * Return: Success: 0
+ * Return: Success: 0
*
- * Failure: -1
+ * Failure: -1
*
- * Programmer: Unknown
- * Dec 2nd, 2004
- *
- * Modifications:
+ * Programmer: Unknown
+ * Dec 2nd, 2004
*
*-------------------------------------------------------------------------
*/
@@ -147,19 +139,17 @@ coll_irregular_simple_chunk_read(void)
}
/*-------------------------------------------------------------------------
- * Function: coll_irregular_complex_chunk_write
+ * Function: coll_irregular_complex_chunk_write
*
- * Purpose: Wrapper to test the collectively irregular hyperslab write in chunk
+ * Purpose: Wrapper to test the collectively irregular hyperslab write in chunk
storage(4 chunks)
*
- * Return: Success: 0
- *
- * Failure: -1
+ * Return: Success: 0
*
- * Programmer: Unknown
- * Dec 2nd, 2004
+ * Failure: -1
*
- * Modifications:
+ * Programmer: Unknown
+ * Dec 2nd, 2004
*
*-------------------------------------------------------------------------
*/
@@ -174,19 +164,17 @@ coll_irregular_complex_chunk_write(void)
/*-------------------------------------------------------------------------
- * Function: coll_irregular_complex_chunk_read
+ * Function: coll_irregular_complex_chunk_read
*
- * Purpose: Wrapper to test the collectively irregular hyperslab read in chunk
+ * Purpose: Wrapper to test the collectively irregular hyperslab read in chunk
storage(1 chunk)
*
- * Return: Success: 0
- *
- * Failure: -1
+ * Return: Success: 0
*
- * Programmer: Unknown
- * Dec 2nd, 2004
+ * Failure: -1
*
- * Modifications:
+ * Programmer: Unknown
+ * Dec 2nd, 2004
*
*-------------------------------------------------------------------------
*/
@@ -200,20 +188,18 @@ coll_irregular_complex_chunk_read(void)
/*-------------------------------------------------------------------------
- * Function: coll_write_test
+ * Function: coll_write_test
*
- * Purpose: To test the collectively irregular hyperslab write in chunk
+ * Purpose: To test the collectively irregular hyperslab write in chunk
storage
* Input: number of chunks on each dimension
if number is equal to 0, contiguous storage
- * Return: Success: 0
+ * Return: Success: 0
*
- * Failure: -1
+ * Failure: -1
*
- * Programmer: Unknown
- * Dec 2nd, 2004
- *
- * Modifications: Oct 18th, 2005
+ * Programmer: Unknown
+ * Dec 2nd, 2004
*
*-------------------------------------------------------------------------
*/
@@ -229,14 +215,14 @@ void coll_write_test(int chunk_factor)
#if 0
hsize_t mdim1[] = {MSPACE1_DIM}; /* Dimension size of the first dataset
- (in memory) */
+ (in memory) */
hsize_t fsdim[] = {FSPACE_DIM1, FSPACE_DIM2}; /* Dimension sizes of the dataset
(on disk) */
hsize_t mdim[] = {MSPACE_DIM1, MSPACE_DIM2}; /* Dimension sizes of the
- dataset in memory when we
- read selection from the
- dataset on the disk */
+ dataset in memory when we
+ read selection from the
+ dataset on the disk */
#endif
hsize_t start[2]; /* Start of hyperslab */
@@ -252,12 +238,12 @@ void coll_write_test(int chunk_factor)
#if 0
int matrix_out[MSPACE_DIM1][MSPACE_DIM2];
int matrix_out1[MSPACE_DIM1][MSPACE_DIM2]; /* Buffer to read from the
- dataset */
+ dataset */
int vector[MSPACE1_DIM];
#endif
- int *matrix_out, *matrix_out1, *vector;
+ int *matrix_out = NULL, *matrix_out1 = NULL, *vector = NULL;
int mpi_size,mpi_rank;
@@ -616,12 +602,12 @@ void coll_write_test(int chunk_factor)
*/
ret = H5Dread(datasetc, H5T_NATIVE_INT, mspaceid, fspaceid,
- H5P_DEFAULT, matrix_out);
+ H5P_DEFAULT, matrix_out);
VRFY((ret >= 0),"H5D independent read succeed");
ret = H5Dread(dataseti, H5T_NATIVE_INT, mspaceid, fspaceid,
- H5P_DEFAULT, matrix_out1);
+ H5P_DEFAULT, matrix_out1);
VRFY((ret >= 0),"H5D independent read succeed");
ret = 0;
@@ -664,26 +650,30 @@ void coll_write_test(int chunk_factor)
ret = H5Fclose(file);
VRFY((ret >= 0),"");
+ if (vector)
+ HDfree(vector);
+ if (matrix_out)
+ HDfree(matrix_out);
+ if (matrix_out1)
+ HDfree(matrix_out1);
+
return ;
}
/*-------------------------------------------------------------------------
- * Function: coll_read_test
+ * Function: coll_read_test
*
- * Purpose: To test the collectively irregular hyperslab read in chunk
+ * Purpose: To test the collectively irregular hyperslab read in chunk
storage
* Input: number of chunks on each dimension
if number is equal to 0, contiguous storage
- * Return: Success: 0
+ * Return: Success: 0
*
- * Failure: -1
+ * Failure: -1
*
- * Programmer: Unknown
- * Dec 2nd, 2004
+ * Programmer: Unknown
+ * Dec 2nd, 2004
*
- * Modifications: Oct 18th, 2005
- * Note: This test must be used with the correpsonding
- coll_write_test.
*-------------------------------------------------------------------------
*/
static void
@@ -699,9 +689,9 @@ coll_read_test(int chunk_factor)
/* Dimension sizes of the dataset (on disk) */
#if 0
hsize_t mdim[] = {MSPACE_DIM1, MSPACE_DIM2}; /* Dimension sizes of the
- dataset in memory when we
- read selection from the
- dataset on the disk */
+ dataset in memory when we
+ read selection from the
+ dataset on the disk */
#endif
hsize_t mdim[2];
@@ -718,7 +708,7 @@ coll_read_test(int chunk_factor)
#if 0
int matrix_out[MSPACE_DIM1][MSPACE_DIM2];
int matrix_out1[MSPACE_DIM1][MSPACE_DIM2]; /* Buffer to read from the
- dataset */
+ dataset */
#endif
int mpi_size,mpi_rank;
@@ -882,7 +872,7 @@ coll_read_test(int chunk_factor)
/* Collective read */
ret = H5Dread(dataseti, H5T_NATIVE_INT, mspaceid, fspaceid1,
- dxfer_plist, matrix_out);
+ dxfer_plist, matrix_out);
VRFY((ret >= 0),"H5D collecive read succeed");
ret = H5Pclose(dxfer_plist);
@@ -890,7 +880,7 @@ coll_read_test(int chunk_factor)
/* Independent read */
ret = H5Dread(dataseti, H5T_NATIVE_INT, mspaceid, fspaceid1,
- H5P_DEFAULT, matrix_out1);
+ H5P_DEFAULT, matrix_out1);
VRFY((ret >= 0),"H5D independent read succeed");
ret = 0;
@@ -933,30 +923,30 @@ coll_read_test(int chunk_factor)
/****************************************************************
**
-** lower_dim_size_comp_test__select_checker_board():
+** lower_dim_size_comp_test__select_checker_board():
**
-** Given a data space of tgt_rank, and dimensions:
+** Given a dataspace of tgt_rank, and dimensions:
**
-** (mpi_size + 1), edge_size, ... , edge_size
+** (mpi_size + 1), edge_size, ... , edge_size
**
-** edge_size, and a checker_edge_size, select a checker
-** board selection of a sel_rank (sel_rank < tgt_rank)
-** dimensional slice through the data space parallel to the
+** edge_size, and a checker_edge_size, select a checker
+** board selection of a sel_rank (sel_rank < tgt_rank)
+** dimensional slice through the dataspace parallel to the
** sel_rank fastest changing indicies, with origin (in the
-** higher indicies) as indicated by the start array.
+** higher indicies) as indicated by the start array.
**
-** Note that this function, is hard coded to presume a
-** maximum data space rank of 5.
+** Note that this function, is hard coded to presume a
+** maximum dataspace rank of 5.
**
-** While this maximum is declared as a constant, increasing
-** it will require extensive coding in addition to changing
+** While this maximum is declared as a constant, increasing
+** it will require extensive coding in addition to changing
** the value of the constant.
**
-** JRM -- 11/11/09
+** JRM -- 11/11/09
**
****************************************************************/
-#define LDSCT_DS_RANK 5
+#define LDSCT_DS_RANK 5
#define LOWER_DIM_SIZE_COMP_TEST_DEBUG_TARGET_RANK 0
#define LOWER_DIM_SIZE_COMP_TEST__SELECT_CHECKER_BOARD__DEBUG 0
@@ -971,32 +961,32 @@ lower_dim_size_comp_test__select_checker_board(
const int sel_rank,
hsize_t sel_start[])
{
-#if LOWER_DIM_SIZE_COMP_TEST__SELECT_CHECKER_BOARD__DEBUG
- const char * fcnName =
- "lower_dim_size_comp_test__select_checker_board():";
-#endif
- hbool_t first_selection = TRUE;
+#if LOWER_DIM_SIZE_COMP_TEST__SELECT_CHECKER_BOARD__DEBUG
+ const char * fcnName =
+ "lower_dim_size_comp_test__select_checker_board():";
+#endif
+ hbool_t first_selection = TRUE;
int i, j, k, l, m;
- int ds_offset;
- int sel_offset;
- const int test_max_rank = LDSCT_DS_RANK; /* must update code if */
+ int ds_offset;
+ int sel_offset;
+ const int test_max_rank = LDSCT_DS_RANK; /* must update code if */
/* this changes */
- hsize_t base_count;
+ hsize_t base_count;
hsize_t offset_count;
- hsize_t start[LDSCT_DS_RANK];
- hsize_t stride[LDSCT_DS_RANK];
- hsize_t count[LDSCT_DS_RANK];
- hsize_t block[LDSCT_DS_RANK];
- herr_t ret; /* Generic return value */
+ hsize_t start[LDSCT_DS_RANK];
+ hsize_t stride[LDSCT_DS_RANK];
+ hsize_t count[LDSCT_DS_RANK];
+ hsize_t block[LDSCT_DS_RANK];
+ herr_t ret; /* Generic return value */
-#if LOWER_DIM_SIZE_COMP_TEST__SELECT_CHECKER_BOARD__DEBUG
+#if LOWER_DIM_SIZE_COMP_TEST__SELECT_CHECKER_BOARD__DEBUG
if ( mpi_rank == LOWER_DIM_SIZE_COMP_TEST_DEBUG_TARGET_RANK ) {
- HDfprintf(stdout,
+ HDfprintf(stdout,
"%s:%d: dims/checker_edge_size = %d %d %d %d %d / %d\n",
fcnName, mpi_rank, (int)dims[0], (int)dims[1], (int)dims[2],
(int)dims[3], (int)dims[4], checker_edge_size);
}
-#endif /* LOWER_DIM_SIZE_COMP_TEST__SELECT_CHECKER_BOARD__DEBUG */
+#endif /* LOWER_DIM_SIZE_COMP_TEST__SELECT_CHECKER_BOARD__DEBUG */
HDassert( 0 < checker_edge_size );
HDassert( 0 < sel_rank );
@@ -1014,14 +1004,14 @@ lower_dim_size_comp_test__select_checker_board(
HDassert( (hsize_t)checker_edge_size <= dims[sel_offset] );
HDassert( dims[sel_offset] == 10 );
-#if LOWER_DIM_SIZE_COMP_TEST__SELECT_CHECKER_BOARD__DEBUG
+#if LOWER_DIM_SIZE_COMP_TEST__SELECT_CHECKER_BOARD__DEBUG
if ( mpi_rank == LOWER_DIM_SIZE_COMP_TEST_DEBUG_TARGET_RANK ) {
- HDfprintf(stdout, "%s:%d: sel_rank/sel_offset = %d/%d.\n",
+ HDfprintf(stdout, "%s:%d: sel_rank/sel_offset = %d/%d.\n",
fcnName, mpi_rank, sel_rank, sel_offset);
- HDfprintf(stdout, "%s:%d: tgt_rank/ds_offset = %d/%d.\n",
+ HDfprintf(stdout, "%s:%d: tgt_rank/ds_offset = %d/%d.\n",
fcnName, mpi_rank, tgt_rank, ds_offset);
}
-#endif /* LOWER_DIM_SIZE_COMP_TEST__SELECT_CHECKER_BOARD__DEBUG */
+#endif /* LOWER_DIM_SIZE_COMP_TEST__SELECT_CHECKER_BOARD__DEBUG */
/* First, compute the base count (which assumes start == 0
* for the associated offset) and offset_count (which
@@ -1043,25 +1033,25 @@ lower_dim_size_comp_test__select_checker_board(
base_count++;
}
- offset_count =
- (hsize_t)((dims[sel_offset] - (hsize_t)checker_edge_size) /
+ offset_count =
+ (hsize_t)((dims[sel_offset] - (hsize_t)checker_edge_size) /
((hsize_t)(checker_edge_size * 2)));
- if ( ((dims[sel_rank] - (hsize_t)checker_edge_size) %
+ if ( ((dims[sel_rank] - (hsize_t)checker_edge_size) %
((hsize_t)(checker_edge_size * 2))) > 0 ) {
offset_count++;
}
-#if LOWER_DIM_SIZE_COMP_TEST__SELECT_CHECKER_BOARD__DEBUG
+#if LOWER_DIM_SIZE_COMP_TEST__SELECT_CHECKER_BOARD__DEBUG
if ( mpi_rank == LOWER_DIM_SIZE_COMP_TEST_DEBUG_TARGET_RANK ) {
- HDfprintf(stdout, "%s:%d: base_count/offset_count = %d/%d.\n",
+ HDfprintf(stdout, "%s:%d: base_count/offset_count = %d/%d.\n",
fcnName, mpi_rank, base_count, offset_count);
}
-#endif /* LOWER_DIM_SIZE_COMP_TEST__SELECT_CHECKER_BOARD__DEBUG */
+#endif /* LOWER_DIM_SIZE_COMP_TEST__SELECT_CHECKER_BOARD__DEBUG */
/* Now set up the stride and block arrays, and portions of the start
- * and count arrays that will not be altered during the selection of
+ * and count arrays that will not be altered during the selection of
* the checker board.
*/
i = 0;
@@ -1093,7 +1083,7 @@ lower_dim_size_comp_test__select_checker_board(
i++;
}
-
+
i = 0;
do {
if ( 0 >= sel_offset ) {
@@ -1112,7 +1102,7 @@ lower_dim_size_comp_test__select_checker_board(
}
j = 0;
- do {
+ do {
if ( 1 >= sel_offset ) {
if ( j == 0 ) {
@@ -1181,78 +1171,78 @@ lower_dim_size_comp_test__select_checker_board(
if ( ((i + j + k + l + m) % 2) == 0 ) {
-#if LOWER_DIM_SIZE_COMP_TEST__SELECT_CHECKER_BOARD__DEBUG
- if ( mpi_rank ==
+#if LOWER_DIM_SIZE_COMP_TEST__SELECT_CHECKER_BOARD__DEBUG
+ if ( mpi_rank ==
LOWER_DIM_SIZE_COMP_TEST_DEBUG_TARGET_RANK ) {
- HDfprintf(stdout,
- "%s%d: *** first_selection = %d ***\n",
+ HDfprintf(stdout,
+ "%s%d: *** first_selection = %d ***\n",
fcnName, mpi_rank, (int)first_selection);
- HDfprintf(stdout,
+ HDfprintf(stdout,
"%s:%d: i/j/k/l/m = %d/%d/%d/%d/%d\n",
fcnName, mpi_rank, i, j, k, l, m);
- HDfprintf(stdout,
- "%s:%d: start = %d %d %d %d %d.\n",
- fcnName, mpi_rank,
- (int)start[0], (int)start[1],
- (int)start[2], (int)start[3],
+ HDfprintf(stdout,
+ "%s:%d: start = %d %d %d %d %d.\n",
+ fcnName, mpi_rank,
+ (int)start[0], (int)start[1],
+ (int)start[2], (int)start[3],
(int)start[4]);
- HDfprintf(stdout,
- "%s:%d: stride = %d %d %d %d %d.\n",
- fcnName, mpi_rank,
- (int)stride[0], (int)stride[1],
- (int)stride[2], (int)stride[3],
+ HDfprintf(stdout,
+ "%s:%d: stride = %d %d %d %d %d.\n",
+ fcnName, mpi_rank,
+ (int)stride[0], (int)stride[1],
+ (int)stride[2], (int)stride[3],
(int)stride[4]);
- HDfprintf(stdout,
- "%s:%d: count = %d %d %d %d %d.\n",
- fcnName, mpi_rank,
- (int)count[0], (int)count[1],
- (int)count[2], (int)count[3],
+ HDfprintf(stdout,
+ "%s:%d: count = %d %d %d %d %d.\n",
+ fcnName, mpi_rank,
+ (int)count[0], (int)count[1],
+ (int)count[2], (int)count[3],
(int)count[4]);
- HDfprintf(stdout,
- "%s:%d: block = %d %d %d %d %d.\n",
- fcnName, mpi_rank,
- (int)block[0], (int)block[1],
- (int)block[2], (int)block[3],
+ HDfprintf(stdout,
+ "%s:%d: block = %d %d %d %d %d.\n",
+ fcnName, mpi_rank,
+ (int)block[0], (int)block[1],
+ (int)block[2], (int)block[3],
(int)block[4]);
- HDfprintf(stdout,
- "%s:%d: n-cube extent dims = %d.\n",
+ HDfprintf(stdout,
+ "%s:%d: n-cube extent dims = %d.\n",
fcnName, mpi_rank,
H5Sget_simple_extent_ndims(tgt_sid));
- HDfprintf(stdout,
- "%s:%d: selection rank = %d.\n",
+ HDfprintf(stdout,
+ "%s:%d: selection rank = %d.\n",
fcnName, mpi_rank, sel_rank);
}
#endif
if ( first_selection ) {
- first_selection = FALSE;
+ first_selection = FALSE;
ret = H5Sselect_hyperslab
(
- tgt_sid,
+ tgt_sid,
H5S_SELECT_SET,
- &(start[ds_offset]),
- &(stride[ds_offset]),
- &(count[ds_offset]),
+ &(start[ds_offset]),
+ &(stride[ds_offset]),
+ &(count[ds_offset]),
&(block[ds_offset])
);
-
+
VRFY((ret != FAIL), "H5Sselect_hyperslab(SET) succeeded");
} else {
ret = H5Sselect_hyperslab
(
- tgt_sid,
+ tgt_sid,
H5S_SELECT_OR,
- &(start[ds_offset]),
- &(stride[ds_offset]),
- &(count[ds_offset]),
+ &(start[ds_offset]),
+ &(stride[ds_offset]),
+ &(count[ds_offset]),
&(block[ds_offset])
);
-
+
VRFY((ret != FAIL), "H5Sselect_hyperslab(OR) succeeded");
}
@@ -1284,14 +1274,14 @@ lower_dim_size_comp_test__select_checker_board(
} while ( ( i <= 1 ) &&
( 0 >= sel_offset ) );
-#if LOWER_DIM_SIZE_COMP_TEST__SELECT_CHECKER_BOARD__DEBUG
+#if LOWER_DIM_SIZE_COMP_TEST__SELECT_CHECKER_BOARD__DEBUG
if ( mpi_rank == LOWER_DIM_SIZE_COMP_TEST_DEBUG_TARGET_RANK ) {
HDfprintf(stdout, "%s%d: H5Sget_select_npoints(tgt_sid) = %d.\n",
fcnName, mpi_rank, (int)H5Sget_select_npoints(tgt_sid));
}
#endif /* LOWER_DIM_SIZE_COMP_TEST__SELECT_CHECKER_BOARD__DEBUG */
- /* Clip the selection back to the data space proper. */
+ /* Clip the selection back to the dataspace proper. */
for ( i = 0; i < test_max_rank; i++ ) {
@@ -1306,7 +1296,7 @@ lower_dim_size_comp_test__select_checker_board(
VRFY((ret != FAIL), "H5Sselect_hyperslab(AND) succeeded");
-#if LOWER_DIM_SIZE_COMP_TEST__SELECT_CHECKER_BOARD__DEBUG
+#if LOWER_DIM_SIZE_COMP_TEST__SELECT_CHECKER_BOARD__DEBUG
if ( mpi_rank == LOWER_DIM_SIZE_COMP_TEST_DEBUG_TARGET_RANK ) {
HDfprintf(stdout, "%s%d: H5Sget_select_npoints(tgt_sid) = %d.\n",
fcnName, mpi_rank, (int)H5Sget_select_npoints(tgt_sid));
@@ -1321,57 +1311,57 @@ lower_dim_size_comp_test__select_checker_board(
/****************************************************************
**
-** lower_dim_size_comp_test__verify_data():
+** lower_dim_size_comp_test__verify_data():
**
-** Examine the supplied buffer to see if it contains the
-** expected data. Return TRUE if it does, and FALSE
+** Examine the supplied buffer to see if it contains the
+** expected data. Return TRUE if it does, and FALSE
** otherwise.
**
-** The supplied buffer is presumed to this process's slice
-** of the target data set. Each such slice will be an
-** n-cube of rank (rank -1) and the supplied edge_size with
-** origin (mpi_rank, 0, ... , 0) in the target data set.
+** The supplied buffer is presumed to this process's slice
+** of the target data set. Each such slice will be an
+** n-cube of rank (rank -1) and the supplied edge_size with
+** origin (mpi_rank, 0, ... , 0) in the target data set.
**
-** Further, the buffer is presumed to be the result of reading
-** or writing a checker board selection of an m (1 <= m <
+** Further, the buffer is presumed to be the result of reading
+** or writing a checker board selection of an m (1 <= m <
** rank) dimensional slice through this processes slice
-** of the target data set. Also, this slice must be parallel
-** to the fastest changing indicies.
+** of the target data set. Also, this slice must be parallel
+** to the fastest changing indicies.
**
-** It is further presumed that the buffer was zeroed before
-** the read/write, and that the full target data set (i.e.
-** the buffer/data set for all processes) was initialized
-** with the natural numbers listed in order from the origin
-** along the fastest changing axis.
+** It is further presumed that the buffer was zeroed before
+** the read/write, and that the full target data set (i.e.
+** the buffer/data set for all processes) was initialized
+** with the natural numbers listed in order from the origin
+** along the fastest changing axis.
**
** Thus for a 20x10x10 dataset, the value stored in location
-** (x, y, z) (assuming that z is the fastest changing index
-** and x the slowest) is assumed to be:
+** (x, y, z) (assuming that z is the fastest changing index
+** and x the slowest) is assumed to be:
**
-** (10 * 10 * x) + (10 * y) + z
+** (10 * 10 * x) + (10 * y) + z
**
-** Further, supposing that this is process 10, this process's
-** slice of the dataset would be a 10 x 10 2-cube with origin
-** (10, 0, 0) in the data set, and would be initialize (prior
-** to the checkerboard selection) as follows:
+** Further, supposing that this is process 10, this process's
+** slice of the dataset would be a 10 x 10 2-cube with origin
+** (10, 0, 0) in the data set, and would be initialize (prior
+** to the checkerboard selection) as follows:
**
-** 1000, 1001, 1002, ... 1008, 1009
-** 1010, 1011, 1012, ... 1018, 1019
-** . . . . .
-** . . . . .
-** . . . . .
-** 1090, 1091, 1092, ... 1098, 1099
+** 1000, 1001, 1002, ... 1008, 1009
+** 1010, 1011, 1012, ... 1018, 1019
+** . . . . .
+** . . . . .
+** . . . . .
+** 1090, 1091, 1092, ... 1098, 1099
**
-** In the case of a read from the processors slice of another
-** data set of different rank, the values expected will have
-** to be adjusted accordingly. This is done via the
-** first_expected_val parameter.
+** In the case of a read from the processors slice of another
+** data set of different rank, the values expected will have
+** to be adjusted accordingly. This is done via the
+** first_expected_val parameter.
**
-** Finally, the function presumes that the first element
-** of the buffer resides either at the origin of either
-** a selected or an unselected checker. (Translation:
-** if partial checkers appear in the buffer, they will
-** intersect the edges of the n-cube oposite the origin.)
+** Finally, the function presumes that the first element
+** of the buffer resides either at the origin of either
+** a selected or an unselected checker. (Translation:
+** if partial checkers appear in the buffer, they will
+** intersect the edges of the n-cube oposite the origin.)
**
****************************************************************/
@@ -1379,7 +1369,7 @@ lower_dim_size_comp_test__select_checker_board(
static hbool_t
lower_dim_size_comp_test__verify_data(uint32_t * buf_ptr,
-#if LOWER_DIM_SIZE_COMP_TEST__VERIFY_DATA__DEBUG
+#if LOWER_DIM_SIZE_COMP_TEST__VERIFY_DATA__DEBUG
const int mpi_rank,
#endif /* LOWER_DIM_SIZE_COMP_TEST__VERIFY_DATA__DEBUG */
const int rank,
@@ -1389,8 +1379,8 @@ lower_dim_size_comp_test__verify_data(uint32_t * buf_ptr,
hbool_t buf_starts_in_checker)
{
#if LOWER_DIM_SIZE_COMP_TEST__VERIFY_DATA__DEBUG
- const char * fcnName =
- "lower_dim_size_comp_test__verify_data():";
+ const char * fcnName =
+ "lower_dim_size_comp_test__verify_data():";
#endif
hbool_t good_data = TRUE;
hbool_t in_checker;
@@ -1409,16 +1399,16 @@ lower_dim_size_comp_test__verify_data(uint32_t * buf_ptr,
HDassert( checker_edge_size <= edge_size );
HDassert( test_max_rank <= LDSCT_DS_RANK );
-#if LOWER_DIM_SIZE_COMP_TEST__VERIFY_DATA__DEBUG
+#if LOWER_DIM_SIZE_COMP_TEST__VERIFY_DATA__DEBUG
if ( mpi_rank == LOWER_DIM_SIZE_COMP_TEST_DEBUG_TARGET_RANK ) {
HDfprintf(stdout, "%s mpi_rank = %d.\n", fcnName, mpi_rank);
HDfprintf(stdout, "%s rank = %d.\n", fcnName, rank);
HDfprintf(stdout, "%s edge_size = %d.\n", fcnName, edge_size);
- HDfprintf(stdout, "%s checker_edge_size = %d.\n",
+ HDfprintf(stdout, "%s checker_edge_size = %d.\n",
fcnName, checker_edge_size);
- HDfprintf(stdout, "%s first_expected_val = %d.\n",
+ HDfprintf(stdout, "%s first_expected_val = %d.\n",
fcnName, (int)first_expected_val);
- HDfprintf(stdout, "%s starts_in_checker = %d.\n",
+ HDfprintf(stdout, "%s starts_in_checker = %d.\n",
fcnName, (int)buf_starts_in_checker);
}
#endif
@@ -1463,7 +1453,7 @@ lower_dim_size_comp_test__verify_data(uint32_t * buf_ptr,
y = 0;
start_in_checker[3] = start_in_checker[2];
do
- {
+ {
if ( y >= checker_edge_size ) {
start_in_checker[3] = ! start_in_checker[3];
@@ -1472,8 +1462,8 @@ lower_dim_size_comp_test__verify_data(uint32_t * buf_ptr,
m = 0;
z = 0;
-#if LOWER_DIM_SIZE_COMP_TEST__VERIFY_DATA__DEBUG
- if ( mpi_rank ==
+#if LOWER_DIM_SIZE_COMP_TEST__VERIFY_DATA__DEBUG
+ if ( mpi_rank ==
LOWER_DIM_SIZE_COMP_TEST_DEBUG_TARGET_RANK ) {
HDfprintf(stdout, "%d, %d, %d, %d, %d:", i, j, k, l, m);
}
@@ -1481,8 +1471,8 @@ lower_dim_size_comp_test__verify_data(uint32_t * buf_ptr,
in_checker = start_in_checker[3];
do
{
-#if LOWER_DIM_SIZE_COMP_TEST__VERIFY_DATA__DEBUG
- if ( mpi_rank ==
+#if LOWER_DIM_SIZE_COMP_TEST__VERIFY_DATA__DEBUG
+ if ( mpi_rank ==
LOWER_DIM_SIZE_COMP_TEST_DEBUG_TARGET_RANK ) {
HDfprintf(stdout, " %d", (int)(*val_ptr));
}
@@ -1492,21 +1482,21 @@ lower_dim_size_comp_test__verify_data(uint32_t * buf_ptr,
in_checker = ! in_checker;
z = 0;
}
-
+
if ( in_checker ) {
-
+
if ( *val_ptr != expected_value ) {
good_data = FALSE;
}
-
+
/* zero out buffer for re-use */
*val_ptr = 0;
} else if ( *val_ptr != 0 ) {
good_data = FALSE;
-
+
/* zero out buffer for re-use */
*val_ptr = 0;
@@ -1516,11 +1506,11 @@ lower_dim_size_comp_test__verify_data(uint32_t * buf_ptr,
expected_value++;
m++;
z++;
-
+
} while ( ( rank >= (test_max_rank - 4) ) &&
( m < edge_size ) );
-#if LOWER_DIM_SIZE_COMP_TEST__VERIFY_DATA__DEBUG
- if ( mpi_rank ==
+#if LOWER_DIM_SIZE_COMP_TEST__VERIFY_DATA__DEBUG
+ if ( mpi_rank ==
LOWER_DIM_SIZE_COMP_TEST_DEBUG_TARGET_RANK ) {
HDfprintf(stdout, "\n");
}
@@ -1548,22 +1538,20 @@ lower_dim_size_comp_test__verify_data(uint32_t * buf_ptr,
/*-------------------------------------------------------------------------
- * Function: lower_dim_size_comp_test__run_test()
+ * Function: lower_dim_size_comp_test__run_test()
*
- * Purpose: Verify that a bug in the computation of the size of the
- * lower dimensions of a data space in H5S_obtain_datatype()
- * has been corrected.
+ * Purpose: Verify that a bug in the computation of the size of the
+ * lower dimensions of a dataspace in H5S_obtain_datatype()
+ * has been corrected.
*
- * Return: void
+ * Return: void
*
- * Programmer: JRM -- 11/11/09
- *
- * Modifications:
+ * Programmer: JRM -- 11/11/09
*
*-------------------------------------------------------------------------
*/
-#define LDSCT_DS_RANK 5
+#define LDSCT_DS_RANK 5
#define LOWER_DIM_SIZE_COMP_TEST__RUN_TEST__DEBUG 0
static void
@@ -1571,21 +1559,21 @@ lower_dim_size_comp_test__run_test(const int chunk_edge_size,
const hbool_t use_collective_io,
const hid_t dset_type)
{
-#if LOWER_DIM_SIZE_COMP_TEST__RUN_TEST__DEBUG
+#if LOWER_DIM_SIZE_COMP_TEST__RUN_TEST__DEBUG
const char *fcnName = "lower_dim_size_comp_test__run_test()";
- int rank;
- hsize_t dims[32];
- hsize_t max_dims[32];
+ int rank;
+ hsize_t dims[32];
+ hsize_t max_dims[32];
#endif /* LOWER_DIM_SIZE_COMP_TEST__RUN_TEST__DEBUG */
const char *filename;
- hbool_t data_ok = FALSE;
- hbool_t mis_match = FALSE;
+ hbool_t data_ok = FALSE;
+ hbool_t mis_match = FALSE;
int i;
int start_index;
int stop_index;
- int mrc;
- int mpi_rank;
- int mpi_size;
+ int mrc;
+ int mpi_rank;
+ int mpi_size;
MPI_Comm mpi_comm = MPI_COMM_NULL;
MPI_Info mpi_info = MPI_INFO_NULL;
hid_t fid; /* HDF5 file ID */
@@ -1635,7 +1623,7 @@ lower_dim_size_comp_test__run_test(const int chunk_edge_size,
mpi_comm = MPI_COMM_WORLD;
mpi_info = MPI_INFO_NULL;
-#if LOWER_DIM_SIZE_COMP_TEST__RUN_TEST__DEBUG
+#if LOWER_DIM_SIZE_COMP_TEST__RUN_TEST__DEBUG
if ( mpi_rank == LOWER_DIM_SIZE_COMP_TEST_DEBUG_TARGET_RANK ) {
HDfprintf(stdout, "%s:%d: chunk_edge_size = %d.\n",
fcnName, mpi_rank, (int)chunk_edge_size);
@@ -1650,13 +1638,13 @@ lower_dim_size_comp_test__run_test(const int chunk_edge_size,
large_ds_size = (size_t)((mpi_size + 1) * 10 * 10 * 10 * 10);
large_ds_slice_size = (size_t) (10 * 10 * 10 * 10);
-#if LOWER_DIM_SIZE_COMP_TEST__RUN_TEST__DEBUG
+#if LOWER_DIM_SIZE_COMP_TEST__RUN_TEST__DEBUG
if ( mpi_rank == LOWER_DIM_SIZE_COMP_TEST_DEBUG_TARGET_RANK ) {
HDfprintf(stdout, "%s:%d: small ds size / slice size = %d / %d.\n",
- fcnName, mpi_rank,
+ fcnName, mpi_rank,
(int)small_ds_size, (int)small_ds_slice_size);
HDfprintf(stdout, "%s:%d: large ds size / slice size = %d / %d.\n",
- fcnName, mpi_rank,
+ fcnName, mpi_rank,
(int)large_ds_size, (int)large_ds_slice_size);
}
#endif /* LOWER_DIM_SIZE_COMP_TEST__RUN_TEST__DEBUG */
@@ -1739,7 +1727,7 @@ lower_dim_size_comp_test__run_test(const int chunk_edge_size,
large_dims[3] = 10;
large_dims[4] = 10;
-#if LOWER_DIM_SIZE_COMP_TEST__RUN_TEST__DEBUG
+#if LOWER_DIM_SIZE_COMP_TEST__RUN_TEST__DEBUG
if ( mpi_rank == LOWER_DIM_SIZE_COMP_TEST_DEBUG_TARGET_RANK ) {
HDfprintf(stdout, "%s:%d: small_dims[] = %d %d %d %d %d\n",
fcnName, mpi_rank, (int)small_dims[0], (int)small_dims[1],
@@ -1748,41 +1736,41 @@ lower_dim_size_comp_test__run_test(const int chunk_edge_size,
fcnName, mpi_rank, (int)large_dims[0], (int)large_dims[1],
(int)large_dims[2], (int)large_dims[3], (int)large_dims[4]);
}
-#endif
+#endif
- /* create data spaces */
+ /* create dataspaces */
full_mem_small_ds_sid = H5Screate_simple(5, small_dims, NULL);
- VRFY((full_mem_small_ds_sid != 0),
+ VRFY((full_mem_small_ds_sid != 0),
"H5Screate_simple() full_mem_small_ds_sid succeeded");
full_file_small_ds_sid = H5Screate_simple(5, small_dims, NULL);
- VRFY((full_file_small_ds_sid != 0),
+ VRFY((full_file_small_ds_sid != 0),
"H5Screate_simple() full_file_small_ds_sid succeeded");
mem_small_ds_sid = H5Screate_simple(5, small_dims, NULL);
- VRFY((mem_small_ds_sid != 0),
+ VRFY((mem_small_ds_sid != 0),
"H5Screate_simple() mem_small_ds_sid succeeded");
file_small_ds_sid = H5Screate_simple(5, small_dims, NULL);
- VRFY((file_small_ds_sid != 0),
+ VRFY((file_small_ds_sid != 0),
"H5Screate_simple() file_small_ds_sid succeeded");
full_mem_large_ds_sid = H5Screate_simple(5, large_dims, NULL);
- VRFY((full_mem_large_ds_sid != 0),
+ VRFY((full_mem_large_ds_sid != 0),
"H5Screate_simple() full_mem_large_ds_sid succeeded");
full_file_large_ds_sid = H5Screate_simple(5, large_dims, NULL);
- VRFY((full_file_large_ds_sid != 0),
+ VRFY((full_file_large_ds_sid != 0),
"H5Screate_simple() full_file_large_ds_sid succeeded");
mem_large_ds_sid = H5Screate_simple(5, large_dims, NULL);
- VRFY((mem_large_ds_sid != 0),
+ VRFY((mem_large_ds_sid != 0),
"H5Screate_simple() mem_large_ds_sid succeeded");
file_large_ds_sid = H5Screate_simple(5, large_dims, NULL);
- VRFY((file_large_ds_sid != 0),
+ VRFY((file_large_ds_sid != 0),
"H5Screate_simple() file_large_ds_sid succeeded");
@@ -1812,14 +1800,14 @@ lower_dim_size_comp_test__run_test(const int chunk_edge_size,
small_chunk_dims[1] = small_chunk_dims[2] = (hsize_t)1;
small_chunk_dims[3] = small_chunk_dims[4] = (hsize_t)chunk_edge_size;
-#if LOWER_DIM_SIZE_COMP_TEST__RUN_TEST__DEBUG
+#if LOWER_DIM_SIZE_COMP_TEST__RUN_TEST__DEBUG
if ( mpi_rank == LOWER_DIM_SIZE_COMP_TEST_DEBUG_TARGET_RANK ) {
HDfprintf(stdout, "%s:%d: small chunk dims[] = %d %d %d %d %d\n",
- fcnName, mpi_rank, (int)small_chunk_dims[0],
- (int)small_chunk_dims[1], (int)small_chunk_dims[2],
+ fcnName, mpi_rank, (int)small_chunk_dims[0],
+ (int)small_chunk_dims[1], (int)small_chunk_dims[2],
(int)small_chunk_dims[3], (int)small_chunk_dims[4]);
}
-#endif
+#endif
small_ds_dcpl_id = H5Pcreate(H5P_DATASET_CREATE);
VRFY((ret != FAIL), "H5Pcreate() small_ds_dcpl_id succeeded");
@@ -1831,18 +1819,18 @@ lower_dim_size_comp_test__run_test(const int chunk_edge_size,
VRFY((ret != FAIL), "H5Pset_chunk() small_ds_dcpl_id succeeded");
large_chunk_dims[0] = (hsize_t)(1);
- large_chunk_dims[1] = large_chunk_dims[2] =
- large_chunk_dims[3] = large_chunk_dims[4] = (hsize_t)chunk_edge_size;
+ large_chunk_dims[1] = large_chunk_dims[2] =
+ large_chunk_dims[3] = large_chunk_dims[4] = (hsize_t)chunk_edge_size;
-#if LOWER_DIM_SIZE_COMP_TEST__RUN_TEST__DEBUG
+#if LOWER_DIM_SIZE_COMP_TEST__RUN_TEST__DEBUG
if ( mpi_rank == LOWER_DIM_SIZE_COMP_TEST_DEBUG_TARGET_RANK ) {
HDfprintf(stdout, "%s:%d: large chunk dims[] = %d %d %d %d %d\n",
- fcnName, mpi_rank, (int)large_chunk_dims[0],
- (int)large_chunk_dims[1], (int)large_chunk_dims[2],
+ fcnName, mpi_rank, (int)large_chunk_dims[0],
+ (int)large_chunk_dims[1], (int)large_chunk_dims[2],
(int)large_chunk_dims[3], (int)large_chunk_dims[4]);
}
-#endif
+#endif
large_ds_dcpl_id = H5Pcreate(H5P_DATASET_CREATE);
VRFY((ret != FAIL), "H5Pcreate() large_ds_dcpl_id succeeded");
@@ -1868,11 +1856,11 @@ lower_dim_size_comp_test__run_test(const int chunk_edge_size,
large_ds_dcpl_id, H5P_DEFAULT);
VRFY((ret >= 0), "H5Dcreate2() large_dataset succeeded");
-#if LOWER_DIM_SIZE_COMP_TEST__RUN_TEST__DEBUG
+#if LOWER_DIM_SIZE_COMP_TEST__RUN_TEST__DEBUG
if ( mpi_rank == LOWER_DIM_SIZE_COMP_TEST_DEBUG_TARGET_RANK ) {
- HDfprintf(stdout,
- "%s:%d: small/large ds id = %d / %d.\n",
- fcnName, mpi_rank, (int)small_dataset,
+ HDfprintf(stdout,
+ "%s:%d: small/large ds id = %d / %d.\n",
+ fcnName, mpi_rank, (int)small_dataset,
(int)large_dataset);
}
#endif /* LOWER_DIM_SIZE_COMP_TEST__RUN_TEST__DEBUG */
@@ -1906,10 +1894,10 @@ lower_dim_size_comp_test__run_test(const int chunk_edge_size,
block[0] = block[1] = block[2] = 1;
block[3] = block[4] = 10;
-#if LOWER_DIM_SIZE_COMP_TEST__RUN_TEST__DEBUG
+#if LOWER_DIM_SIZE_COMP_TEST__RUN_TEST__DEBUG
if ( mpi_rank == LOWER_DIM_SIZE_COMP_TEST_DEBUG_TARGET_RANK ) {
- HDfprintf(stdout,
- "%s:%d: settings for small data set initialization.\n",
+ HDfprintf(stdout,
+ "%s:%d: settings for small data set initialization.\n",
fcnName, mpi_rank);
HDfprintf(stdout, "%s:%d: start[] = %d %d %d %d %d\n",
fcnName, mpi_rank, (int)start[0], (int)start[1],
@@ -1947,10 +1935,10 @@ lower_dim_size_comp_test__run_test(const int chunk_edge_size,
start[0] = 0;
-#if LOWER_DIM_SIZE_COMP_TEST__RUN_TEST__DEBUG
+#if LOWER_DIM_SIZE_COMP_TEST__RUN_TEST__DEBUG
if ( mpi_rank == LOWER_DIM_SIZE_COMP_TEST_DEBUG_TARGET_RANK ) {
- HDfprintf(stdout,
- "%s:%d: added settings for main process.\n",
+ HDfprintf(stdout,
+ "%s:%d: added settings for main process.\n",
fcnName, mpi_rank);
HDfprintf(stdout, "%s:%d: start[] = %d %d %d %d %d\n",
fcnName, mpi_rank, (int)start[0], (int)start[1],
@@ -1992,23 +1980,23 @@ lower_dim_size_comp_test__run_test(const int chunk_edge_size,
/* write the initial value of the small data set to file */
-#if LOWER_DIM_SIZE_COMP_TEST__RUN_TEST__DEBUG
+#if LOWER_DIM_SIZE_COMP_TEST__RUN_TEST__DEBUG
if ( mpi_rank == LOWER_DIM_SIZE_COMP_TEST_DEBUG_TARGET_RANK ) {
HDfprintf(stdout, "%s:%d: writing init value of small ds to file.\n",
fcnName, mpi_rank);
}
#endif /* LOWER_DIM_SIZE_COMP_TEST__RUN_TEST__DEBUG */
- ret = H5Dwrite(small_dataset,
- dset_type,
- mem_small_ds_sid,
+ ret = H5Dwrite(small_dataset,
+ dset_type,
+ mem_small_ds_sid,
file_small_ds_sid,
- xfer_plist,
+ xfer_plist,
small_ds_buf_0);
VRFY((ret >= 0), "H5Dwrite() small_dataset initial write succeeded");
- /* read the small data set back to verify that it contains the
- * expected data. Note that each process reads in the entire
+ /* read the small data set back to verify that it contains the
+ * expected data. Note that each process reads in the entire
* data set and verifies it.
*/
ret = H5Dread(small_dataset,
@@ -2061,10 +2049,10 @@ lower_dim_size_comp_test__run_test(const int chunk_edge_size,
block[0] = (hsize_t)1;
block[1] = block[2] = block[3] = block[4] = (hsize_t)10;
-#if LOWER_DIM_SIZE_COMP_TEST__RUN_TEST__DEBUG
+#if LOWER_DIM_SIZE_COMP_TEST__RUN_TEST__DEBUG
if ( mpi_rank == LOWER_DIM_SIZE_COMP_TEST_DEBUG_TARGET_RANK ) {
- HDfprintf(stdout,
- "%s:%d: settings for large data set initialization.\n",
+ HDfprintf(stdout,
+ "%s:%d: settings for large data set initialization.\n",
fcnName, mpi_rank);
HDfprintf(stdout, "%s:%d: start[] = %d %d %d %d %d\n",
fcnName, mpi_rank, (int)start[0], (int)start[1],
@@ -2097,15 +2085,15 @@ lower_dim_size_comp_test__run_test(const int chunk_edge_size,
block);
VRFY((ret >= 0), "H5Sselect_hyperslab(file_large_ds_sid, set) suceeded");
-#if LOWER_DIM_SIZE_COMP_TEST__RUN_TEST__DEBUG
+#if LOWER_DIM_SIZE_COMP_TEST__RUN_TEST__DEBUG
if ( mpi_rank == LOWER_DIM_SIZE_COMP_TEST_DEBUG_TARGET_RANK ) {
- HDfprintf(stdout,
+ HDfprintf(stdout,
"%s%d: H5Sget_select_npoints(mem_large_ds_sid) = %d.\n",
- fcnName, mpi_rank,
+ fcnName, mpi_rank,
(int)H5Sget_select_npoints(mem_large_ds_sid));
- HDfprintf(stdout,
+ HDfprintf(stdout,
"%s%d: H5Sget_select_npoints(file_large_ds_sid) = %d.\n",
- fcnName, mpi_rank,
+ fcnName, mpi_rank,
(int)H5Sget_select_npoints(file_large_ds_sid));
}
#endif /* LOWER_DIM_SIZE_COMP_TEST__RUN_TEST__DEBUG */
@@ -2114,10 +2102,10 @@ lower_dim_size_comp_test__run_test(const int chunk_edge_size,
start[0] = (hsize_t)0;
-#if LOWER_DIM_SIZE_COMP_TEST__RUN_TEST__DEBUG
+#if LOWER_DIM_SIZE_COMP_TEST__RUN_TEST__DEBUG
if ( mpi_rank == LOWER_DIM_SIZE_COMP_TEST_DEBUG_TARGET_RANK ) {
- HDfprintf(stdout,
- "%s:%d: added settings for main process.\n",
+ HDfprintf(stdout,
+ "%s:%d: added settings for main process.\n",
fcnName, mpi_rank);
HDfprintf(stdout, "%s:%d: start[] = %d %d %d %d %d\n",
fcnName, mpi_rank, (int)start[0], (int)start[1],
@@ -2150,21 +2138,21 @@ lower_dim_size_comp_test__run_test(const int chunk_edge_size,
block);
VRFY((ret>= 0), "H5Sselect_hyperslab(file_large_ds_sid, or) suceeded");
-#if LOWER_DIM_SIZE_COMP_TEST__RUN_TEST__DEBUG
+#if LOWER_DIM_SIZE_COMP_TEST__RUN_TEST__DEBUG
if ( mpi_rank == LOWER_DIM_SIZE_COMP_TEST_DEBUG_TARGET_RANK ) {
- HDfprintf(stdout,
+ HDfprintf(stdout,
"%s%d: H5Sget_select_npoints(mem_large_ds_sid) = %d.\n",
- fcnName, mpi_rank,
+ fcnName, mpi_rank,
(int)H5Sget_select_npoints(mem_large_ds_sid));
- HDfprintf(stdout,
+ HDfprintf(stdout,
"%s%d: H5Sget_select_npoints(file_large_ds_sid) = %d.\n",
- fcnName, mpi_rank,
+ fcnName, mpi_rank,
(int)H5Sget_select_npoints(file_large_ds_sid));
}
#endif /* LOWER_DIM_SIZE_COMP_TEST__RUN_TEST__DEBUG */
}
- /* try clipping the selection back to the large data space proper */
+ /* try clipping the selection back to the large dataspace proper */
start[0] = start[1] = start[2] = start[3] = start[4] = (hsize_t)0;
stride[0] = (hsize_t)(2 * (mpi_size + 1));
@@ -2183,19 +2171,19 @@ lower_dim_size_comp_test__run_test(const int chunk_edge_size,
start, stride, count, block);
VRFY((ret != FAIL),"H5Sselect_hyperslab(file_large_ds_sid, and) succeeded");
-#if LOWER_DIM_SIZE_COMP_TEST__RUN_TEST__DEBUG
- if ( mpi_rank == LOWER_DIM_SIZE_COMP_TEST_DEBUG_TARGET_RANK ) {
+#if LOWER_DIM_SIZE_COMP_TEST__RUN_TEST__DEBUG
+ if ( mpi_rank == LOWER_DIM_SIZE_COMP_TEST_DEBUG_TARGET_RANK ) {
rank = H5Sget_simple_extent_dims(mem_large_ds_sid, dims, max_dims);
- HDfprintf(stdout,
+ HDfprintf(stdout,
"%s:%d: mem_large_ds_sid dims[%d] = %d %d %d %d %d\n",
- fcnName, mpi_rank, rank, (int)dims[0], (int)dims[1],
+ fcnName, mpi_rank, rank, (int)dims[0], (int)dims[1],
(int)dims[2], (int)dims[3], (int)dims[4]);
rank = H5Sget_simple_extent_dims(file_large_ds_sid, dims, max_dims);
- HDfprintf(stdout,
+ HDfprintf(stdout,
"%s:%d: file_large_ds_sid dims[%d] = %d %d %d %d %d\n",
- fcnName, mpi_rank, rank, (int)dims[0], (int)dims[1],
+ fcnName, mpi_rank, rank, (int)dims[0], (int)dims[1],
(int)dims[2], (int)dims[3], (int)dims[4]);
}
#endif /* LOWER_DIM_SIZE_COMP_TEST__RUN_TEST__DEBUG */
@@ -2208,26 +2196,26 @@ lower_dim_size_comp_test__run_test(const int chunk_edge_size,
/* write the initial value of the large data set to file */
-#if LOWER_DIM_SIZE_COMP_TEST__RUN_TEST__DEBUG
- if ( mpi_rank == LOWER_DIM_SIZE_COMP_TEST_DEBUG_TARGET_RANK ) {
+#if LOWER_DIM_SIZE_COMP_TEST__RUN_TEST__DEBUG
+ if ( mpi_rank == LOWER_DIM_SIZE_COMP_TEST_DEBUG_TARGET_RANK ) {
HDfprintf(stdout, "%s:%d: writing init value of large ds to file.\n",
fcnName, mpi_rank);
- HDfprintf(stdout,
+ HDfprintf(stdout,
"%s:%d: large_dataset = %d.\n",
- fcnName, mpi_rank,
+ fcnName, mpi_rank,
(int)large_dataset);
- HDfprintf(stdout,
+ HDfprintf(stdout,
"%s:%d: mem_large_ds_sid = %d, file_large_ds_sid = %d.\n",
- fcnName, mpi_rank,
+ fcnName, mpi_rank,
(int)mem_large_ds_sid, (int)file_large_ds_sid);
}
#endif /* LOWER_DIM_SIZE_COMP_TEST__RUN_TEST__DEBUG */
- ret = H5Dwrite(large_dataset,
- dset_type,
- mem_large_ds_sid,
+ ret = H5Dwrite(large_dataset,
+ dset_type,
+ mem_large_ds_sid,
file_large_ds_sid,
- xfer_plist,
+ xfer_plist,
large_ds_buf_0);
if ( ret < 0 ) H5Eprint2(H5E_DEFAULT, stderr);
@@ -2238,8 +2226,8 @@ lower_dim_size_comp_test__run_test(const int chunk_edge_size,
mrc = MPI_Barrier(MPI_COMM_WORLD);
VRFY((mrc==MPI_SUCCESS), "Sync after large dataset writes");
- /* read the large data set back to verify that it contains the
- * expected data. Note that each process reads in the entire
+ /* read the large data set back to verify that it contains the
+ * expected data. Note that each process reads in the entire
* data set.
*/
ret = H5Dread(large_dataset,
@@ -2278,13 +2266,13 @@ lower_dim_size_comp_test__run_test(const int chunk_edge_size,
/***********************************/
- /* read a checkerboard selection of the process slice of the
- * small on disk data set into the process slice of the large
+ /* read a checkerboard selection of the process slice of the
+ * small on disk data set into the process slice of the large
* in memory data set, and verify the data read.
*/
small_sel_start[0] = (hsize_t)(mpi_rank + 1);
- small_sel_start[1] = small_sel_start[2] =
+ small_sel_start[1] = small_sel_start[2] =
small_sel_start[3] = small_sel_start[4] = 0;
lower_dim_size_comp_test__select_checker_board(mpi_rank,
@@ -2296,9 +2284,9 @@ lower_dim_size_comp_test__run_test(const int chunk_edge_size,
small_sel_start);
expected_value = (uint32_t)
- ((small_sel_start[0] * small_dims[1] * small_dims[2] *
+ ((small_sel_start[0] * small_dims[1] * small_dims[2] *
small_dims[3] * small_dims[4]) +
- (small_sel_start[1] * small_dims[2] * small_dims[3] *
+ (small_sel_start[1] * small_dims[2] * small_dims[3] *
small_dims[4]) +
(small_sel_start[2] * small_dims[3] * small_dims[4]) +
(small_sel_start[3] * small_dims[4]) +
@@ -2321,8 +2309,7 @@ lower_dim_size_comp_test__run_test(const int chunk_edge_size,
/* verify that H5S_select_shape_same() reports the two
* selections as having the same shape.
*/
- check = H5S_select_shape_same_test(mem_large_ds_sid,
- file_small_ds_sid);
+ check = H5S_select_shape_same_test(mem_large_ds_sid, file_small_ds_sid);
VRFY((check == TRUE), "H5S_select_shape_same_test passed (1)");
@@ -2335,7 +2322,7 @@ lower_dim_size_comp_test__run_test(const int chunk_edge_size,
VRFY((ret >= 0), "H5Sread() slice from small ds succeeded.");
-#if LOWER_DIM_SIZE_COMP_TEST__RUN_TEST__DEBUG
+#if LOWER_DIM_SIZE_COMP_TEST__RUN_TEST__DEBUG
if ( mpi_rank == LOWER_DIM_SIZE_COMP_TEST_DEBUG_TARGET_RANK ) {
HDfprintf(stdout, "%s:%d: H5Dread() returns.\n", fcnName, mpi_rank);
}
@@ -2345,9 +2332,9 @@ lower_dim_size_comp_test__run_test(const int chunk_edge_size,
data_ok = TRUE;
- start_index = (int)((large_sel_start[0] * large_dims[1] * large_dims[2] *
+ start_index = (int)((large_sel_start[0] * large_dims[1] * large_dims[2] *
large_dims[3] * large_dims[4]) +
- (large_sel_start[1] * large_dims[2] * large_dims[3] *
+ (large_sel_start[1] * large_dims[2] * large_dims[3] *
large_dims[4]) +
(large_sel_start[2] * large_dims[3] * large_dims[4]) +
(large_sel_start[3] * large_dims[4]) +
@@ -2409,13 +2396,13 @@ lower_dim_size_comp_test__run_test(const int chunk_edge_size,
- /* read a checkerboard selection of a slice of the process slice of
- * the large on disk data set into the process slice of the small
+ /* read a checkerboard selection of a slice of the process slice of
+ * the large on disk data set into the process slice of the small
* in memory data set, and verify the data read.
*/
small_sel_start[0] = (hsize_t)(mpi_rank + 1);
- small_sel_start[1] = small_sel_start[2] =
+ small_sel_start[1] = small_sel_start[2] =
small_sel_start[3] = small_sel_start[4] = 0;
lower_dim_size_comp_test__select_checker_board(mpi_rank,
@@ -2442,8 +2429,7 @@ lower_dim_size_comp_test__run_test(const int chunk_edge_size,
/* verify that H5S_select_shape_same() reports the two
* selections as having the same shape.
*/
- check = H5S_select_shape_same_test(mem_small_ds_sid,
- file_large_ds_sid);
+ check = H5S_select_shape_same_test(mem_small_ds_sid, file_large_ds_sid);
VRFY((check == TRUE), "H5S_select_shape_same_test passed (2)");
@@ -2456,7 +2442,7 @@ lower_dim_size_comp_test__run_test(const int chunk_edge_size,
VRFY((ret >= 0), "H5Sread() slice from large ds succeeded.");
-#if LOWER_DIM_SIZE_COMP_TEST__RUN_TEST__DEBUG
+#if LOWER_DIM_SIZE_COMP_TEST__RUN_TEST__DEBUG
if ( mpi_rank == LOWER_DIM_SIZE_COMP_TEST_DEBUG_TARGET_RANK ) {
HDfprintf(stdout, "%s:%d: H5Dread() returns.\n", fcnName, mpi_rank);
}
@@ -2467,9 +2453,9 @@ lower_dim_size_comp_test__run_test(const int chunk_edge_size,
data_ok = TRUE;
expected_value = (uint32_t)
- ((large_sel_start[0] * large_dims[1] * large_dims[2] *
+ ((large_sel_start[0] * large_dims[1] * large_dims[2] *
large_dims[3] * large_dims[4]) +
- (large_sel_start[1] * large_dims[2] * large_dims[3] *
+ (large_sel_start[1] * large_dims[2] * large_dims[3] *
large_dims[4]) +
(large_sel_start[2] * large_dims[3] * large_dims[4]) +
(large_sel_start[3] * large_dims[4]) +
@@ -2522,7 +2508,7 @@ lower_dim_size_comp_test__run_test(const int chunk_edge_size,
#if LOWER_DIM_SIZE_COMP_TEST__VERIFY_DATA__DEBUG
if ( mpi_rank == LOWER_DIM_SIZE_COMP_TEST_DEBUG_TARGET_RANK ) {
- HDfprintf(stdout, "%s:%d: unexpected value at index %d: %d.\n",
+ HDfprintf(stdout, "%s:%d: unexpected value at index %d: %d.\n",
fcnName, mpi_rank, (int)i, (int)(*ptr_1));
}
#endif /* LOWER_DIM_SIZE_COMP_TEST__VERIFY_DATA__DEBUG */
@@ -2590,17 +2576,15 @@ lower_dim_size_comp_test__run_test(const int chunk_edge_size,
/*-------------------------------------------------------------------------
- * Function: lower_dim_size_comp_test()
+ * Function: lower_dim_size_comp_test()
*
- * Purpose: Test to see if an error in the computation of the size
- * of the lower dimensions in H5S_obtain_datatype() has
- * been corrected.
+ * Purpose: Test to see if an error in the computation of the size
+ * of the lower dimensions in H5S_obtain_datatype() has
+ * been corrected.
*
- * Return: void
+ * Return: void
*
- * Programmer: JRM -- 11/11/09
- *
- * Modifications:
+ * Programmer: JRM -- 11/11/09
*
*-------------------------------------------------------------------------
*/
@@ -2609,66 +2593,60 @@ void
lower_dim_size_comp_test(void)
{
/* const char *fcnName = "lower_dim_size_comp_test()"; */
- int chunk_edge_size = 0;
- int use_collective_io = 1;
- hid_t dset_type = H5T_NATIVE_UINT;
+ int chunk_edge_size = 0;
+ int use_collective_io;
+
#if 0
- sleep(60);
+ HDsleep(60);
#endif
- HDcompile_assert(sizeof(uint32_t) == sizeof(unsigned));
- for ( use_collective_io = (hbool_t)0;
- (int)use_collective_io <= 1;
- (hbool_t)(use_collective_io++) ) {
+ HDcompile_assert(sizeof(uint32_t) == sizeof(unsigned));
+ for(use_collective_io = 0; use_collective_io <= 1; use_collective_io++) {
chunk_edge_size = 0;
lower_dim_size_comp_test__run_test(chunk_edge_size,
(hbool_t)use_collective_io,
- dset_type);
-
+ H5T_NATIVE_UINT);
chunk_edge_size = 5;
lower_dim_size_comp_test__run_test(chunk_edge_size,
(hbool_t)use_collective_io,
- dset_type);
- }
+ H5T_NATIVE_UINT);
+ } /* end for */
return;
-
} /* lower_dim_size_comp_test() */
/*-------------------------------------------------------------------------
- * Function: link_chunk_collective_io_test()
- *
- * Purpose: Test to verify that an error in MPI type management in
- * H5D_link_chunk_collective_io() has been corrected.
- * In this bug, we used to free MPI types regardless of
- * whether they were basic or derived.
+ * Function: link_chunk_collective_io_test()
*
- * This test is based on a bug report kindly provided by
- * Rob Latham of the MPICH team and ANL.
+ * Purpose: Test to verify that an error in MPI type management in
+ * H5D_link_chunk_collective_io() has been corrected.
+ * In this bug, we used to free MPI types regardless of
+ * whether they were basic or derived.
*
- * The basic thrust of the test is to cause a process
- * to participate in a collective I/O in which it:
+ * This test is based on a bug report kindly provided by
+ * Rob Latham of the MPICH team and ANL.
*
- * 1) Reads or writes exactly one chunk,
+ * The basic thrust of the test is to cause a process
+ * to participate in a collective I/O in which it:
*
- * 2) Has no in memory buffer for any other chunk.
+ * 1) Reads or writes exactly one chunk,
*
- * The test differers from Rob Latham's bug report in
- * that is runs with an arbitrary number of proceeses,
- * and uses a 1 dimensional dataset.
+ * 2) Has no in memory buffer for any other chunk.
*
- * Return: void
+ * The test differers from Rob Latham's bug report in
+ * that is runs with an arbitrary number of proceeses,
+ * and uses a 1 dimensional dataset.
*
- * Programmer: JRM -- 12/16/09
+ * Return: void
*
- * Modifications:
+ * Programmer: JRM -- 12/16/09
*
*-------------------------------------------------------------------------
*/
-#define LINK_CHUNK_COLLECTIVE_IO_TEST_CHUNK_SIZE 16
+#define LINK_CHUNK_COLLECTIVE_IO_TEST_CHUNK_SIZE 16
void
link_chunk_collective_io_test(void)
@@ -2676,8 +2654,8 @@ link_chunk_collective_io_test(void)
/* const char *fcnName = "link_chunk_collective_io_test()"; */
const char *filename;
hbool_t mis_match = FALSE;
- int i;
- int mrc;
+ int i;
+ int mrc;
int mpi_rank;
int mpi_size;
MPI_Comm mpi_comm = MPI_COMM_WORLD;
@@ -2728,7 +2706,7 @@ link_chunk_collective_io_test(void)
/* setup dims */
dims[0] = ((hsize_t)mpi_size) * ((hsize_t)(LINK_CHUNK_COLLECTIVE_IO_TEST_CHUNK_SIZE));
- /* setup mem and file data spaces */
+ /* setup mem and file dataspaces */
write_mem_ds_sid = H5Screate_simple(1, chunk_dims, NULL);
VRFY((write_mem_ds_sid != 0),
"H5Screate_simple() write_mem_ds_sid succeeded");
@@ -2767,8 +2745,8 @@ link_chunk_collective_io_test(void)
for ( i = 0; i < LINK_CHUNK_COLLECTIVE_IO_TEST_CHUNK_SIZE; i++ ) {
local_data_written[i] = expected_value;
- local_data_read[i] = 0.0;
- expected_value += 1.0;
+ local_data_read[i] = 0.0;
+ expected_value += 1.0;
}
/* select the file and mem spaces */
@@ -2794,15 +2772,15 @@ link_chunk_collective_io_test(void)
VRFY((ret >= 0), "H5Pset_dxpl_mpio succeeded");
/* write the data set */
- ret = H5Dwrite(dset_id,
- H5T_NATIVE_DOUBLE,
- write_mem_ds_sid,
+ ret = H5Dwrite(dset_id,
+ H5T_NATIVE_DOUBLE,
+ write_mem_ds_sid,
file_ds_sid,
- xfer_plist,
+ xfer_plist,
local_data_written);
VRFY((ret >= 0), "H5Dwrite() dataset initial write succeeded");
-
+
/* sync with the other processes before checking data */
mrc = MPI_Barrier(MPI_COMM_WORLD);
VRFY((mrc==MPI_SUCCESS), "Sync after dataset write");
@@ -2830,7 +2808,7 @@ link_chunk_collective_io_test(void)
if ( diff >= 0.001 ) {
mis_match = TRUE;
- }
+ }
}
VRFY( (mis_match == FALSE), "dataset data good.");
diff --git a/testpar/testphdf5.c b/testpar/testphdf5.c
index ce0c69b..b89c790 100644
--- a/testpar/testphdf5.c
+++ b/testpar/testphdf5.c
@@ -26,15 +26,15 @@ int dim0;
int dim1;
int chunkdim0;
int chunkdim1;
-int nerrors = 0; /* errors count */
-int ndatasets = 300; /* number of datasets to create*/
+int nerrors = 0; /* errors count */
+int ndatasets = 300; /* number of datasets to create*/
int ngroups = 512; /* number of groups to create in root
- * group. */
-int facc_type = FACC_MPIO; /*Test file access type */
+ * group. */
+int facc_type = FACC_MPIO; /*Test file access type */
int dxfer_coll_type = DXFER_COLLECTIVE_IO;
-H5E_auto2_t old_func; /* previous error handler */
-void *old_client_data; /* previous error handler arg.*/
+H5E_auto2_t old_func; /* previous error handler */
+void *old_client_data; /* previous error handler arg.*/
/* other option flags */
@@ -46,10 +46,10 @@ void *old_client_data; /* previous error handler arg.*/
#define NFILENAME 2
#define PARATESTFILE filenames[0]
const char *FILENAME[NFILENAME]={
- "ParaTest",
- NULL};
-char filenames[NFILENAME][PATH_MAX];
-hid_t fapl; /* file access property list */
+ "ParaTest",
+ NULL};
+char filenames[NFILENAME][PATH_MAX];
+hid_t fapl; /* file access property list */
#ifdef USE_PAUSE
/* pause the process for a moment to allow debugger to attach if desired. */
@@ -62,7 +62,7 @@ void pause_proc(void)
{
int pid;
- h5_stat_t statbuf;
+ h5_stat_t statbuf;
char greenlight[] = "go";
int maxloop = 10;
int loops = 0;
@@ -79,15 +79,15 @@ void pause_proc(void)
MPI_Get_processor_name(mpi_name, &mpi_namelen);
if (MAINPROCESS)
- while ((HDstat(greenlight, &statbuf) == -1) && loops < maxloop){
- if (!loops++){
- printf("Proc %d (%*s, %d): to debug, attach %d\n",
- mpi_rank, mpi_namelen, mpi_name, pid, pid);
- }
- printf("waiting(%ds) for file %s ...\n", time_int, greenlight);
- fflush(stdout);
- sleep(time_int);
- }
+ while ((HDstat(greenlight, &statbuf) == -1) && loops < maxloop){
+ if (!loops++){
+ HDprintf("Proc %d (%*s, %d): to debug, attach %d\n",
+ mpi_rank, mpi_namelen, mpi_name, pid, pid);
+ }
+ HDprintf("waiting(%ds) for file %s ...\n", time_int, greenlight);
+ HDfflush(stdout);
+ HDsleep(time_int);
+ }
MPI_Barrier(MPI_COMM_WORLD);
}
@@ -99,7 +99,7 @@ int MPI_Init(int *argc, char ***argv)
pause_proc();
return (ret_code);
}
-#endif /* USE_PAUSE */
+#endif /* USE_PAUSE */
/*
@@ -108,18 +108,18 @@ int MPI_Init(int *argc, char ***argv)
static void
usage(void)
{
- printf(" [-r] [-w] [-m<n_datasets>] [-n<n_groups>] "
- "[-o] [-f <prefix>] [-d <dim0> <dim1>]\n");
- printf("\t-m<n_datasets>"
- "\tset number of datasets for the multiple dataset test\n");
- printf("\t-n<n_groups>"
- "\tset number of groups for the multiple group test\n");
- printf("\t-f <prefix>\tfilename prefix\n");
- printf("\t-2\t\tuse Split-file together with MPIO\n");
- printf("\t-d <factor0> <factor1>\tdataset dimensions factors. Defaults (%d,%d)\n",
- ROW_FACTOR, COL_FACTOR);
- printf("\t-c <dim0> <dim1>\tdataset chunk dimensions. Defaults (dim0/10,dim1/10)\n");
- printf("\n");
+ HDprintf(" [-r] [-w] [-m<n_datasets>] [-n<n_groups>] "
+ "[-o] [-f <prefix>] [-d <dim0> <dim1>]\n");
+ HDprintf("\t-m<n_datasets>"
+ "\tset number of datasets for the multiple dataset test\n");
+ HDprintf("\t-n<n_groups>"
+ "\tset number of groups for the multiple group test\n");
+ HDprintf("\t-f <prefix>\tfilename prefix\n");
+ HDprintf("\t-2\t\tuse Split-file together with MPIO\n");
+ HDprintf("\t-d <factor0> <factor1>\tdataset dimensions factors. Defaults (%d,%d)\n",
+ ROW_FACTOR, COL_FACTOR);
+ HDprintf("\t-c <dim0> <dim1>\tdataset chunk dimensions. Defaults (dim0/10,dim1/10)\n");
+ HDprintf("\n");
}
@@ -129,7 +129,7 @@ usage(void)
static int
parse_options(int argc, char **argv)
{
- int mpi_size, mpi_rank; /* mpi variables */
+ int mpi_size, mpi_rank; /* mpi variables */
MPI_Comm_size(MPI_COMM_WORLD, &mpi_size);
MPI_Comm_rank(MPI_COMM_WORLD, &mpi_rank);
@@ -140,107 +140,107 @@ parse_options(int argc, char **argv)
chunkdim1 = (dim1+9)/10;
while (--argc){
- if (**(++argv) != '-'){
- break;
- }else{
- switch(*(*argv+1)){
- case 'm': ndatasets = atoi((*argv+1)+1);
- if (ndatasets < 0){
- nerrors++;
- return(1);
- }
- break;
- case 'n': ngroups = atoi((*argv+1)+1);
- if (ngroups < 0){
- nerrors++;
- return(1);
- }
- break;
- case 'f': if (--argc < 1) {
- nerrors++;
- return(1);
- }
- if (**(++argv) == '-') {
- nerrors++;
- return(1);
- }
- paraprefix = *argv;
- break;
- case 'i': /* Collective MPI-IO access with independent IO */
- dxfer_coll_type = DXFER_INDEPENDENT_IO;
- break;
- case '2': /* Use the split-file driver with MPIO access */
- /* Can use $HDF5_METAPREFIX to define the */
- /* meta-file-prefix. */
- facc_type = FACC_MPIO | FACC_SPLIT;
- break;
- case 'd': /* dimensizes */
- if (--argc < 2){
- nerrors++;
- return(1);
- }
- dim0 = atoi(*(++argv))*mpi_size;
- argc--;
- dim1 = atoi(*(++argv))*mpi_size;
- /* set default chunkdim sizes too */
- chunkdim0 = (dim0+9)/10;
- chunkdim1 = (dim1+9)/10;
- break;
- case 'c': /* chunk dimensions */
- if (--argc < 2){
- nerrors++;
- return(1);
- }
- chunkdim0 = atoi(*(++argv));
- argc--;
- chunkdim1 = atoi(*(++argv));
- break;
- case 'h': /* print help message--return with nerrors set */
- return(1);
- default: printf("Illegal option(%s)\n", *argv);
- nerrors++;
- return(1);
- }
- }
+ if (**(++argv) != '-'){
+ break;
+ }else{
+ switch(*(*argv+1)){
+ case 'm': ndatasets = atoi((*argv+1)+1);
+ if (ndatasets < 0){
+ nerrors++;
+ return(1);
+ }
+ break;
+ case 'n': ngroups = atoi((*argv+1)+1);
+ if (ngroups < 0){
+ nerrors++;
+ return(1);
+ }
+ break;
+ case 'f': if (--argc < 1) {
+ nerrors++;
+ return(1);
+ }
+ if (**(++argv) == '-') {
+ nerrors++;
+ return(1);
+ }
+ paraprefix = *argv;
+ break;
+ case 'i': /* Collective MPI-IO access with independent IO */
+ dxfer_coll_type = DXFER_INDEPENDENT_IO;
+ break;
+ case '2': /* Use the split-file driver with MPIO access */
+ /* Can use $HDF5_METAPREFIX to define the */
+ /* meta-file-prefix. */
+ facc_type = FACC_MPIO | FACC_SPLIT;
+ break;
+ case 'd': /* dimensizes */
+ if (--argc < 2){
+ nerrors++;
+ return(1);
+ }
+ dim0 = atoi(*(++argv))*mpi_size;
+ argc--;
+ dim1 = atoi(*(++argv))*mpi_size;
+ /* set default chunkdim sizes too */
+ chunkdim0 = (dim0+9)/10;
+ chunkdim1 = (dim1+9)/10;
+ break;
+ case 'c': /* chunk dimensions */
+ if (--argc < 2){
+ nerrors++;
+ return(1);
+ }
+ chunkdim0 = atoi(*(++argv));
+ argc--;
+ chunkdim1 = atoi(*(++argv));
+ break;
+ case 'h': /* print help message--return with nerrors set */
+ return(1);
+ default: HDprintf("Illegal option(%s)\n", *argv);
+ nerrors++;
+ return(1);
+ }
+ }
} /*while*/
/* check validity of dimension and chunk sizes */
if (dim0 <= 0 || dim1 <= 0){
- printf("Illegal dim sizes (%d, %d)\n", dim0, dim1);
- nerrors++;
- return(1);
+ HDprintf("Illegal dim sizes (%d, %d)\n", dim0, dim1);
+ nerrors++;
+ return(1);
}
if (chunkdim0 <= 0 || chunkdim1 <= 0){
- printf("Illegal chunkdim sizes (%d, %d)\n", chunkdim0, chunkdim1);
- nerrors++;
- return(1);
+ HDprintf("Illegal chunkdim sizes (%d, %d)\n", chunkdim0, chunkdim1);
+ nerrors++;
+ return(1);
}
/* Make sure datasets can be divided into equal portions by the processes */
if ((dim0 % mpi_size) || (dim1 % mpi_size)){
- if (MAINPROCESS)
- printf("dim0(%d) and dim1(%d) must be multiples of processes(%d)\n",
- dim0, dim1, mpi_size);
- nerrors++;
- return(1);
+ if (MAINPROCESS)
+ HDprintf("dim0(%d) and dim1(%d) must be multiples of processes(%d)\n",
+ dim0, dim1, mpi_size);
+ nerrors++;
+ return(1);
}
/* compose the test filenames */
{
- int i, n;
-
- n = sizeof(FILENAME)/sizeof(FILENAME[0]) - 1; /* exclude the NULL */
-
- for (i=0; i < n; i++)
- if (h5_fixname(FILENAME[i],fapl,filenames[i],sizeof(filenames[i]))
- == NULL){
- printf("h5_fixname failed\n");
- nerrors++;
- return(1);
- }
- printf("Test filenames are:\n");
- for (i=0; i < n; i++)
- printf(" %s\n", filenames[i]);
+ int i, n;
+
+ n = sizeof(FILENAME)/sizeof(FILENAME[0]) - 1; /* exclude the NULL */
+
+ for (i=0; i < n; i++)
+ if (h5_fixname(FILENAME[i],fapl,filenames[i],sizeof(filenames[i]))
+ == NULL){
+ HDprintf("h5_fixname failed\n");
+ nerrors++;
+ return(1);
+ }
+ HDprintf("Test filenames are:\n");
+ for (i=0; i < n; i++)
+ HDprintf(" %s\n", filenames[i]);
}
return(0);
@@ -255,7 +255,7 @@ create_faccess_plist(MPI_Comm comm, MPI_Info info, int l_facc_type)
{
hid_t ret_pl = -1;
herr_t ret; /* generic return value */
- int mpi_rank; /* mpi variables */
+ int mpi_rank; /* mpi variables */
/* need the rank for error checking macros */
MPI_Comm_rank(MPI_COMM_WORLD, &mpi_rank);
@@ -264,32 +264,36 @@ create_faccess_plist(MPI_Comm comm, MPI_Info info, int l_facc_type)
VRFY((ret_pl >= 0), "H5P_FILE_ACCESS");
if (l_facc_type == FACC_DEFAULT)
- return (ret_pl);
+ return (ret_pl);
if (l_facc_type == FACC_MPIO){
- /* set Parallel access with communicator */
- ret = H5Pset_fapl_mpio(ret_pl, comm, info);
- VRFY((ret >= 0), "");
- return(ret_pl);
+ /* set Parallel access with communicator */
+ ret = H5Pset_fapl_mpio(ret_pl, comm, info);
+ VRFY((ret >= 0), "");
+ ret = H5Pset_all_coll_metadata_ops(ret_pl, TRUE);
+ VRFY((ret >= 0), "");
+ ret = H5Pset_coll_metadata_write(ret_pl, TRUE);
+ VRFY((ret >= 0), "");
+ return(ret_pl);
}
if (l_facc_type == (FACC_MPIO | FACC_SPLIT)){
- hid_t mpio_pl;
-
- mpio_pl = H5Pcreate (H5P_FILE_ACCESS);
- VRFY((mpio_pl >= 0), "");
- /* set Parallel access with communicator */
- ret = H5Pset_fapl_mpio(mpio_pl, comm, info);
- VRFY((ret >= 0), "");
-
- /* setup file access template */
- ret_pl = H5Pcreate (H5P_FILE_ACCESS);
- VRFY((ret_pl >= 0), "");
- /* set Parallel access with communicator */
- ret = H5Pset_fapl_split(ret_pl, ".meta", mpio_pl, ".raw", mpio_pl);
- VRFY((ret >= 0), "H5Pset_fapl_split succeeded");
- H5Pclose(mpio_pl);
- return(ret_pl);
+ hid_t mpio_pl;
+
+ mpio_pl = H5Pcreate (H5P_FILE_ACCESS);
+ VRFY((mpio_pl >= 0), "");
+ /* set Parallel access with communicator */
+ ret = H5Pset_fapl_mpio(mpio_pl, comm, info);
+ VRFY((ret >= 0), "");
+
+ /* setup file access template */
+ ret_pl = H5Pcreate (H5P_FILE_ACCESS);
+ VRFY((ret_pl >= 0), "");
+ /* set Parallel access with communicator */
+ ret = H5Pset_fapl_split(ret_pl, ".meta", mpio_pl, ".raw", mpio_pl);
+ VRFY((ret >= 0), "H5Pset_fapl_split succeeded");
+ H5Pclose(mpio_pl);
+ return(ret_pl);
}
/* unknown file access types */
@@ -299,7 +303,7 @@ create_faccess_plist(MPI_Comm comm, MPI_Info info, int l_facc_type)
int main(int argc, char **argv)
{
- int mpi_size, mpi_rank; /* mpi variables */
+ int mpi_size, mpi_rank; /* mpi variables */
H5Ptest_param_t ndsets_params, ngroups_params;
H5Ptest_param_t collngroups_params;
H5Ptest_param_t io_mode_confusion_params;
@@ -319,18 +323,18 @@ int main(int argc, char **argv)
dim1 = COL_FACTOR*mpi_size;
if (MAINPROCESS){
- printf("===================================\n");
- printf("PHDF5 TESTS START\n");
- printf("===================================\n");
+ HDprintf("===================================\n");
+ HDprintf("PHDF5 TESTS START\n");
+ HDprintf("===================================\n");
}
/* Attempt to turn off atexit post processing so that in case errors
- * happen during the test and the process is aborted, it will not get
- * hang in the atexit post processing in which it may try to make MPI
- * calls. By then, MPI calls may not work.
- */
+ * happen during the test and the process is aborted, it will not get
+ * hang in the atexit post processing in which it may try to make MPI
+ * calls. By then, MPI calls may not work.
+ */
if (H5dont_atexit() < 0){
- printf("Failed to turn off atexit processing. Continue.\n");
+ HDprintf("Failed to turn off atexit processing. Continue.\n");
};
H5open();
h5_show_hostname();
@@ -340,144 +344,152 @@ int main(int argc, char **argv)
/* Tests are generally arranged from least to most complexity... */
AddTest("mpiodup", test_fapl_mpio_dup, NULL,
- "fapl_mpio duplicate", NULL);
+ "fapl_mpio duplicate", NULL);
AddTest("split", test_split_comm_access, NULL,
- "dataset using split communicators", PARATESTFILE);
+ "dataset using split communicators", PARATESTFILE);
+
+#ifdef PB_OUT /* temporary: disable page buffering when parallel */
+ AddTest("page_buffer", test_page_buffer_access, NULL,
+ "page buffer usage in parallel", PARATESTFILE);
+#endif
+
+ AddTest("props", test_file_properties, NULL,
+ "Coll Metadata file property settings", PARATESTFILE);
AddTest("idsetw", dataset_writeInd, NULL,
- "dataset independent write", PARATESTFILE);
+ "dataset independent write", PARATESTFILE);
AddTest("idsetr", dataset_readInd, NULL,
- "dataset independent read", PARATESTFILE);
+ "dataset independent read", PARATESTFILE);
AddTest("cdsetw", dataset_writeAll, NULL,
- "dataset collective write", PARATESTFILE);
+ "dataset collective write", PARATESTFILE);
AddTest("cdsetr", dataset_readAll, NULL,
- "dataset collective read", PARATESTFILE);
+ "dataset collective read", PARATESTFILE);
AddTest("eidsetw", extend_writeInd, NULL,
- "extendible dataset independent write", PARATESTFILE);
+ "extendible dataset independent write", PARATESTFILE);
AddTest("eidsetr", extend_readInd, NULL,
- "extendible dataset independent read", PARATESTFILE);
+ "extendible dataset independent read", PARATESTFILE);
AddTest("ecdsetw", extend_writeAll, NULL,
- "extendible dataset collective write", PARATESTFILE);
+ "extendible dataset collective write", PARATESTFILE);
AddTest("ecdsetr", extend_readAll, NULL,
- "extendible dataset collective read", PARATESTFILE);
+ "extendible dataset collective read", PARATESTFILE);
AddTest("eidsetw2", extend_writeInd2, NULL,
- "extendible dataset independent write #2", PARATESTFILE);
+ "extendible dataset independent write #2", PARATESTFILE);
AddTest("selnone", none_selection_chunk, NULL,
"chunked dataset with none-selection", PARATESTFILE);
AddTest("calloc", test_chunk_alloc, NULL,
- "parallel extend Chunked allocation on serial file", PARATESTFILE);
+ "parallel extend Chunked allocation on serial file", PARATESTFILE);
AddTest("fltread", test_filter_read, NULL,
- "parallel read of dataset written serially with filters", PARATESTFILE);
+ "parallel read of dataset written serially with filters", PARATESTFILE);
#ifdef H5_HAVE_FILTER_DEFLATE
AddTest("cmpdsetr", compress_readAll, NULL,
- "compressed dataset collective read", PARATESTFILE);
+ "compressed dataset collective read", PARATESTFILE);
#endif /* H5_HAVE_FILTER_DEFLATE */
AddTest("zerodsetr", zero_dim_dset, NULL,
- "zero dim dset", PARATESTFILE);
+ "zero dim dset", PARATESTFILE);
ndsets_params.name = PARATESTFILE;
ndsets_params.count = ndatasets;
AddTest("ndsetw", multiple_dset_write, NULL,
- "multiple datasets write", &ndsets_params);
+ "multiple datasets write", &ndsets_params);
ngroups_params.name = PARATESTFILE;
ngroups_params.count = ngroups;
AddTest("ngrpw", multiple_group_write, NULL,
- "multiple groups write", &ngroups_params);
+ "multiple groups write", &ngroups_params);
AddTest("ngrpr", multiple_group_read, NULL,
- "multiple groups read", &ngroups_params);
+ "multiple groups read", &ngroups_params);
AddTest("compact", compact_dataset, NULL,
- "compact dataset test", PARATESTFILE);
+ "compact dataset test", PARATESTFILE);
collngroups_params.name = PARATESTFILE;
collngroups_params.count = ngroups;
- AddTest("cngrpw", collective_group_write, NULL,
- "collective group and dataset write", &collngroups_params);
- AddTest("ingrpr", independent_group_read, NULL,
- "independent group and dataset read", &collngroups_params);
+ /* combined cngrpw and ingrpr tests because ingrpr reads file created by cngrpw. */
+ AddTest("cngrpw-ingrpr", collective_group_write_independent_group_read, NULL,
+ "collective grp/dset write - independent grp/dset read",
+ &collngroups_params);
#ifndef H5_HAVE_WIN32_API
AddTest("bigdset", big_dataset, NULL,
"big dataset test", PARATESTFILE);
#else
- printf("big dataset test will be skipped on Windows (JIRA HDDFV-8064)\n");
+ HDprintf("big dataset test will be skipped on Windows (JIRA HDDFV-8064)\n");
#endif
AddTest("fill", dataset_fillvalue, NULL,
- "dataset fill value", PARATESTFILE);
+ "dataset fill value", PARATESTFILE);
AddTest("cchunk1",
- coll_chunk1,NULL, "simple collective chunk io",PARATESTFILE);
+ coll_chunk1,NULL, "simple collective chunk io",PARATESTFILE);
AddTest("cchunk2",
- coll_chunk2,NULL, "noncontiguous collective chunk io",PARATESTFILE);
+ coll_chunk2,NULL, "noncontiguous collective chunk io",PARATESTFILE);
AddTest("cchunk3",
- coll_chunk3,NULL, "multi-chunk collective chunk io",PARATESTFILE);
+ coll_chunk3,NULL, "multi-chunk collective chunk io",PARATESTFILE);
AddTest("cchunk4",
- coll_chunk4,NULL, "collective chunk io with partial non-selection ",PARATESTFILE);
+ coll_chunk4,NULL, "collective chunk io with partial non-selection ",PARATESTFILE);
if((mpi_size < 3)&& MAINPROCESS ) {
- printf("Collective chunk IO optimization APIs ");
- printf("needs at least 3 processes to participate\n");
- printf("Collective chunk IO API tests will be skipped \n");
+ HDprintf("Collective chunk IO optimization APIs ");
+ HDprintf("needs at least 3 processes to participate\n");
+ HDprintf("Collective chunk IO API tests will be skipped \n");
}
AddTest((mpi_size <3)? "-cchunk5":"cchunk5" ,
- coll_chunk5,NULL,
- "linked chunk collective IO without optimization",PARATESTFILE);
+ coll_chunk5,NULL,
+ "linked chunk collective IO without optimization",PARATESTFILE);
AddTest((mpi_size < 3)? "-cchunk6" : "cchunk6",
- coll_chunk6,NULL,
- "multi-chunk collective IO with direct request",PARATESTFILE);
+ coll_chunk6,NULL,
+ "multi-chunk collective IO with direct request",PARATESTFILE);
AddTest((mpi_size < 3)? "-cchunk7" : "cchunk7",
- coll_chunk7,NULL,
- "linked chunk collective IO with optimization",PARATESTFILE);
+ coll_chunk7,NULL,
+ "linked chunk collective IO with optimization",PARATESTFILE);
AddTest((mpi_size < 3)? "-cchunk8" : "cchunk8",
- coll_chunk8,NULL,
- "linked chunk collective IO transferring to multi-chunk",PARATESTFILE);
+ coll_chunk8,NULL,
+ "linked chunk collective IO transferring to multi-chunk",PARATESTFILE);
AddTest((mpi_size < 3)? "-cchunk9" : "cchunk9",
- coll_chunk9,NULL,
- "multiple chunk collective IO with optimization",PARATESTFILE);
+ coll_chunk9,NULL,
+ "multiple chunk collective IO with optimization",PARATESTFILE);
AddTest((mpi_size < 3)? "-cchunk10" : "cchunk10",
- coll_chunk10,NULL,
- "multiple chunk collective IO transferring to independent IO",PARATESTFILE);
+ coll_chunk10,NULL,
+ "multiple chunk collective IO transferring to independent IO",PARATESTFILE);
-/* irregular collective IO tests*/
+ /* irregular collective IO tests*/
AddTest("ccontw",
- coll_irregular_cont_write,NULL,
- "collective irregular contiguous write",PARATESTFILE);
+ coll_irregular_cont_write,NULL,
+ "collective irregular contiguous write",PARATESTFILE);
AddTest("ccontr",
- coll_irregular_cont_read,NULL,
- "collective irregular contiguous read",PARATESTFILE);
+ coll_irregular_cont_read,NULL,
+ "collective irregular contiguous read",PARATESTFILE);
AddTest("cschunkw",
- coll_irregular_simple_chunk_write,NULL,
- "collective irregular simple chunk write",PARATESTFILE);
+ coll_irregular_simple_chunk_write,NULL,
+ "collective irregular simple chunk write",PARATESTFILE);
AddTest("cschunkr",
- coll_irregular_simple_chunk_read,NULL,
- "collective irregular simple chunk read",PARATESTFILE);
+ coll_irregular_simple_chunk_read,NULL,
+ "collective irregular simple chunk read",PARATESTFILE);
AddTest("ccchunkw",
- coll_irregular_complex_chunk_write,NULL,
- "collective irregular complex chunk write",PARATESTFILE);
+ coll_irregular_complex_chunk_write,NULL,
+ "collective irregular complex chunk write",PARATESTFILE);
AddTest("ccchunkr",
- coll_irregular_complex_chunk_read,NULL,
- "collective irregular complex chunk read",PARATESTFILE);
+ coll_irregular_complex_chunk_read,NULL,
+ "collective irregular complex chunk read",PARATESTFILE);
AddTest("null", null_dataset, NULL,
- "null dataset test", PARATESTFILE);
+ "null dataset test", PARATESTFILE);
io_mode_confusion_params.name = PARATESTFILE;
io_mode_confusion_params.count = 0; /* value not used */
AddTest("I/Omodeconf", io_mode_confusion, NULL,
- "I/O mode confusion test -- hangs quickly on failure",
+ "I/O mode confusion test -- hangs quickly on failure",
&io_mode_confusion_params);
if((mpi_size < 3) && MAINPROCESS) {
- printf("rr_obj_hdr_flush_confusion test needs at least 3 processes.\n");
- printf("rr_obj_hdr_flush_confusion test will be skipped \n");
+ HDprintf("rr_obj_hdr_flush_confusion test needs at least 3 processes.\n");
+ HDprintf("rr_obj_hdr_flush_confusion test will be skipped \n");
}
if(mpi_size > 2) {
rr_obj_flush_confusion_params.name = PARATESTFILE;
@@ -494,12 +506,12 @@ int main(int argc, char **argv)
AddTest("tldsc",
lower_dim_size_comp_test, NULL,
- "test lower dim size comp in span tree to mpi derived type",
+ "test lower dim size comp in span tree to mpi derived type",
PARATESTFILE);
AddTest("lccio",
link_chunk_collective_io_test, NULL,
- "test mpi derived type management",
+ "test mpi derived type management",
PARATESTFILE);
AddTest("actualio", actual_io_mode_tests, NULL,
@@ -510,19 +522,22 @@ int main(int argc, char **argv)
"test cause for broken collective io",
PARATESTFILE);
+ AddTest("edpl", test_plist_ed, NULL,
+ "encode/decode Property Lists", NULL);
+
if((mpi_size < 2) && MAINPROCESS) {
- printf("File Image Ops daisy chain test needs at least 2 processes.\n");
- printf("File Image Ops daisy chain test will be skipped \n");
+ HDprintf("File Image Ops daisy chain test needs at least 2 processes.\n");
+ HDprintf("File Image Ops daisy chain test will be skipped \n");
}
AddTest((mpi_size < 2)? "-fiodc" : "fiodc", file_image_daisy_chain_test, NULL,
"file image ops daisy chain", NULL);
if((mpi_size < 2)&& MAINPROCESS ) {
- printf("Atomicity tests need at least 2 processes to participate\n");
- printf("8 is more recommended.. Atomicity tests will be skipped \n");
+ HDprintf("Atomicity tests need at least 2 processes to participate\n");
+ HDprintf("8 is more recommended.. Atomicity tests will be skipped \n");
}
else if (facc_type != FACC_MPIO && MAINPROCESS) {
- printf("Atomicity tests will not work with a non MPIO VFD\n");
+ HDprintf("Atomicity tests will not work with a non MPIO VFD\n");
}
else if(mpi_size >= 2 && facc_type == FACC_MPIO){
AddTest("atomicity", dataset_atomicity, NULL,
@@ -530,8 +545,14 @@ int main(int argc, char **argv)
}
AddTest("denseattr", test_dense_attr, NULL,
- "Store Dense Attributes", PARATESTFILE);
+ "Store Dense Attributes", PARATESTFILE);
+ AddTest("noselcollmdread", test_partial_no_selection_coll_md_read, NULL,
+ "Collective Metadata read with some ranks having no selection", PARATESTFILE);
+ AddTest("MC_coll_MD_read", test_multi_chunk_io_addrmap_issue, NULL,
+ "Collective MD read with multi chunk I/O (H5D__chunk_addrmap)", PARATESTFILE);
+ AddTest("LC_coll_MD_read", test_link_chunk_io_sort_chunk_issue, NULL,
+ "Collective MD read with link chunk I/O (H5D__sort_chunk)", PARATESTFILE);
/* Display testing information */
TestInfo(argv[0]);
@@ -544,9 +565,9 @@ int main(int argc, char **argv)
TestParseCmdLine(argc, argv);
if (dxfer_coll_type == DXFER_INDEPENDENT_IO && MAINPROCESS){
- printf("===================================\n"
- " Using Independent I/O with file set view to replace collective I/O \n"
- "===================================\n");
+ HDprintf("===================================\n"
+ " Using Independent I/O with file set view to replace collective I/O \n"
+ "===================================\n");
}
@@ -554,8 +575,8 @@ int main(int argc, char **argv)
PerformTests();
/* make sure all processes are finished before final report, cleanup
- * and exit.
- */
+ * and exit.
+ */
MPI_Barrier(MPI_COMM_WORLD);
/* Display test summary, if requested */
@@ -571,20 +592,24 @@ int main(int argc, char **argv)
{
int temp;
MPI_Allreduce(&nerrors, &temp, 1, MPI_INT, MPI_MAX, MPI_COMM_WORLD);
- nerrors=temp;
+ nerrors=temp;
}
- if (MAINPROCESS){ /* only process 0 reports */
- printf("===================================\n");
- if (nerrors)
- printf("***PHDF5 tests detected %d errors***\n", nerrors);
- else
- printf("PHDF5 tests finished with no errors\n");
- printf("===================================\n");
+ if (MAINPROCESS){ /* only process 0 reports */
+ HDprintf("===================================\n");
+ if (nerrors)
+ HDprintf("***PHDF5 tests detected %d errors***\n", nerrors);
+ else
+ HDprintf("PHDF5 tests finished with no errors\n");
+ HDprintf("===================================\n");
}
+
/* close HDF5 library */
H5close();
+ /* Release test infrastructure */
+ TestShutdown();
+
/* MPI_Finalize must be called AFTER H5close which may use MPI calls */
MPI_Finalize();
diff --git a/tools/perform/sio_perf.h b/tools/perform/sio_perf.h
index ba64795..1588ae3 100644
--- a/tools/perform/sio_perf.h
+++ b/tools/perform/sio_perf.h
@@ -55,6 +55,7 @@ typedef struct parameters_ {
off_t num_bytes; /* Number of bytes in each dset */
int num_iters; /* Number of times to loop doing the IO */
int rank; /* Rank of dataset */
+ off_t dset_size[MAX_DIMS]; /* Dataset size */
size_t buf_size[MAX_DIMS]; /* Buffer size */
size_t chk_size[MAX_DIMS]; /* Chunk size */
int order[MAX_DIMS]; /* Buffer size */