make sure ; expansion is done in all commands

48 files changed, 163 insertions, 212 deletions

diff --git a/Source/cmAbstractFilesCommand.cxx b/Source/cmAbstractFilesCommand.cxx
index 32a6237..2bfb6b5 100644
--- a/Source/cmAbstractFilesCommand.cxx
+++ b/Source/cmAbstractFilesCommand.cxx
@@ -17,13 +17,16 @@
 #include "cmAbstractFilesCommand.h"
 
 // cmAbstractFilesCommand
-bool cmAbstractFilesCommand::InitialPass(std::vector<std::string> const& args)
+bool cmAbstractFilesCommand::InitialPass(std::vector<std::string> const& argsIn)
 {
-  if(args.size() < 1 )
+  if(argsIn.size() < 1 )
     {
     this->SetError("called with incorrect number of arguments");
     return false;
     }
+  std::vector<std::string> args;
+  cmSystemTools::ExpandListArguments(argsIn, args);
+
   bool ret = true;
   std::string m = "could not find source file(s):\n";
 
diff --git a/Source/cmAddCustomCommandCommand.cxx b/Source/cmAddCustomCommandCommand.cxx
index eb53961..845ff24 100644
--- a/Source/cmAddCustomCommandCommand.cxx
+++ b/Source/cmAddCustomCommandCommand.cxx
@@ -18,17 +18,19 @@
 
 
 // cmAddCustomCommandCommand
-bool cmAddCustomCommandCommand::InitialPass(std::vector<std::string> const& args)
+bool cmAddCustomCommandCommand::InitialPass(std::vector<std::string> const& argsIn)
 {
   /* Let's complain at the end of this function about the lack of a particular
      arg. For the moment, let's say that SOURCE, COMMAND, TARGET are always 
      required.
   */
-  if (args.size() < 6)
+  if (argsIn.size() < 6)
     {
       this->SetError("called with wrong number of arguments.");
       return false;
     }
+  std::vector<std::string> args;
+  cmSystemTools::ExpandListArguments(argsIn, args);
 
   std::string source, command, target;
   std::vector<std::string> command_args, depends, outputs;
diff --git a/Source/cmAddCustomTargetCommand.cxx b/Source/cmAddCustomTargetCommand.cxx
index d03d4d2..070fc4a 100644
--- a/Source/cmAddCustomTargetCommand.cxx
+++ b/Source/cmAddCustomTargetCommand.cxx
@@ -17,15 +17,17 @@
 #include "cmAddCustomTargetCommand.h"
 
 // cmAddCustomTargetCommand
-bool cmAddCustomTargetCommand::InitialPass(std::vector<std::string> const& args)
+bool cmAddCustomTargetCommand::InitialPass(std::vector<std::string> const& argsIn)
 {
   bool all = false;
   
-  if(args.size() < 2 )
+  if(argsIn.size() < 2 )
     {
     this->SetError("called with incorrect number of arguments");
     return false;
     }
+  std::vector<std::string> args;
+  cmSystemTools::ExpandListArguments(argsIn, args);
 
   // all target option
   std::string arguments;
diff --git a/Source/cmAddDefinitionsCommand.cxx b/Source/cmAddDefinitionsCommand.cxx
index 70846df..75f84ea 100644
--- a/Source/cmAddDefinitionsCommand.cxx
+++ b/Source/cmAddDefinitionsCommand.cxx
@@ -17,13 +17,16 @@
 #include "cmAddDefinitionsCommand.h"
 
 // cmAddDefinitionsCommand
-bool cmAddDefinitionsCommand::InitialPass(std::vector<std::string> const& args)
+bool cmAddDefinitionsCommand::InitialPass(std::vector<std::string> const& argsIn)
 {
-  if(args.size() < 1 )
+  if(argsIn.size() < 1 )
     {
     this->SetError("called with incorrect number of arguments");
     return false;
     }
+  std::vector<std::string> args;
+  cmSystemTools::ExpandListArguments(argsIn, args);
+
   for(std::vector<std::string>::const_iterator i = args.begin();
       i != args.end(); ++i)
     {
diff --git a/Source/cmAddDependenciesCommand.cxx b/Source/cmAddDependenciesCommand.cxx
index c4cc00c..de444ea 100644
--- a/Source/cmAddDependenciesCommand.cxx
+++ b/Source/cmAddDependenciesCommand.cxx
@@ -18,14 +18,16 @@
 #include "cmCacheManager.h"
 
 // cmDependenciesCommand
-bool cmAddDependenciesCommand::InitialPass(std::vector<std::string> const& args)
+bool cmAddDependenciesCommand::InitialPass(std::vector<std::string> const& argsIn)
 {
-  if(args.size() < 2 )
+  if(argsIn.size() < 2 )
     {
     this->SetError("called with incorrect number of arguments");
     return false;
     }
-  
+  std::vector<std::string> args;
+  cmSystemTools::ExpandListArguments(argsIn, args);
+
   std::string target_name = args[0];
 
   cmTargets &tgts = m_Makefile->GetTargets();
diff --git a/Source/cmAddTestCommand.cxx b/Source/cmAddTestCommand.cxx
index 37271fd..ff4e3ba 100644
--- a/Source/cmAddTestCommand.cxx
+++ b/Source/cmAddTestCommand.cxx
@@ -34,13 +34,7 @@ bool cmAddTestCommand::InitialPass(std::vector<std::string> const& args)
   // also expand any CMake variables
 
   m_Args.erase(m_Args.begin(), m_Args.end());
-  std::string temp;
-  for (std::vector<std::string>::const_iterator j = args.begin(); 
-       j != args.end(); ++j)
-    {
-    m_Args.push_back(*j);
-    }
-  
+  cmSystemTools::ExpandListArguments(args, m_Args);
   return true;
 }
 
diff --git a/Source/cmCableClassSetCommand.cxx b/Source/cmCableClassSetCommand.cxx
index ae6ddcf..fca7eba 100644
--- a/Source/cmCableClassSetCommand.cxx
+++ b/Source/cmCableClassSetCommand.cxx
@@ -19,13 +19,15 @@
 #include "cmTarget.h"
 
 // cmCableClassSetCommand
-bool cmCableClassSetCommand::InitialPass(std::vector<std::string> const& args)
+bool cmCableClassSetCommand::InitialPass(std::vector<std::string> const& argsIn)
 {
-  if(args.size() < 2)
+  if(argsIn.size() < 2)
     {
     this->SetError("called with incorrect number of arguments");
     return false;
     }
+  std::vector<std::string> args;
+  cmSystemTools::ExpandListArguments(argsIn, args);
 
   // The first argument is the name of the set.
   std::vector<std::string>::const_iterator arg = args.begin();
diff --git a/Source/cmCableWrapTclCommand.cxx b/Source/cmCableWrapTclCommand.cxx
index 21750a1..96076b7 100644
--- a/Source/cmCableWrapTclCommand.cxx
+++ b/Source/cmCableWrapTclCommand.cxx
@@ -122,17 +122,19 @@ cmCableWrapTclCommand::~cmCableWrapTclCommand()
 
 
 // cmCableWrapTclCommand
-bool cmCableWrapTclCommand::InitialPass(std::vector<std::string> const& args)
+bool cmCableWrapTclCommand::InitialPass(std::vector<std::string> const& argsIn)
 {
-  if(args.size() < 2)
+  if(argsIn.size() < 2)
     {
     this->SetError("called with incorrect number of arguments");
     return false;
     }
+  std::vector<std::string> args;
+  cmSystemTools::ExpandListArguments(argsIn, args);
 
   // Prepare to iterate through the arguments.
   std::vector<std::string>::const_iterator arg = args.begin();
-  
+
   // The first argument is the name of the target.
   m_TargetName = *arg++;
   
diff --git a/Source/cmCommands.cxx b/Source/cmCommands.cxx
index 26e9f06..7aa991e 100644
--- a/Source/cmCommands.cxx
+++ b/Source/cmCommands.cxx
@@ -68,7 +68,6 @@
 #include "cmSetSourceFilesPropertiesCommand.cxx"
 #include "cmSiteNameCommand.cxx"
 #include "cmSourceFilesCommand.cxx"
-#include "cmSourceFilesFlagsCommand.cxx"
 #include "cmSourceFilesRemoveCommand.cxx"
 #include "cmSourceGroupCommand.cxx"
 #include "cmSubdirCommand.cxx"
@@ -137,7 +136,6 @@ void GetPredefinedCommands(std::list<cmCommand*>& commands)
   commands.push_back(new cmSetSourceFilesPropertiesCommand);
   commands.push_back(new cmSiteNameCommand);
   commands.push_back(new cmSourceFilesCommand);
-  commands.push_back(new cmSourceFilesFlagsCommand);
   commands.push_back(new cmSourceFilesRemoveCommand);
   commands.push_back(new cmSourceGroupCommand);
   commands.push_back(new cmSubdirCommand);
diff --git a/Source/cmCreateTestSourceList.cxx b/Source/cmCreateTestSourceList.cxx
index d9c33be..87b4bde 100644
--- a/Source/cmCreateTestSourceList.cxx
+++ b/Source/cmCreateTestSourceList.cxx
@@ -27,7 +27,7 @@ bool cmCreateTestSourceList::InitialPass(std::vector<std::string> const& argsIn)
     }
 
   std::vector<std::string> args;
-  cmSystemTools::ExpandListArguments(argsIn, args, true);
+  cmSystemTools::ExpandListArguments(argsIn, args);
   
   std::vector<std::string>::iterator i = args.begin();
 
diff --git a/Source/cmFLTKWrapUICommand.cxx b/Source/cmFLTKWrapUICommand.cxx
index 6eb7280..3ac91ec 100644
--- a/Source/cmFLTKWrapUICommand.cxx
+++ b/Source/cmFLTKWrapUICommand.cxx
@@ -19,7 +19,7 @@
 // cmFLTKWrapUICommand
 bool cmFLTKWrapUICommand::InitialPass(std::vector<std::string> const& args)
 {
-  if(args.size() < 2 )
+  if(args.size() != 2 )
     {
     this->SetError("called with incorrect number of arguments");
     return false;
diff --git a/Source/cmFindFileCommand.cxx b/Source/cmFindFileCommand.cxx
index 0e40997..22464a0 100644
--- a/Source/cmFindFileCommand.cxx
+++ b/Source/cmFindFileCommand.cxx
@@ -31,12 +31,12 @@ bool cmFindFileCommand::InitialPass(std::vector<std::string> const& argsIn)
   std::string helpString = "Where can the ";
   helpString += argsIn[1] + " file be found";
   size_t size = argsIn.size();
-  std::vector<std::string> args;
+  std::vector<std::string> argst;
   for(unsigned int j = 0; j < size; ++j)
     {
     if(argsIn[j] != "DOC")
       {
-      args.push_back(argsIn[j]);
+      argst.push_back(argsIn[j]);
       }
     else
       {
@@ -47,6 +47,9 @@ bool cmFindFileCommand::InitialPass(std::vector<std::string> const& argsIn)
       break;
       }
     }
+  std::vector<std::string> args;
+  cmSystemTools::ExpandListArguments(argst, args);
+
   std::vector<std::string>::const_iterator i = args.begin();
   // Use the first argument as the name of something to be defined
   const char* define = (*i).c_str();
diff --git a/Source/cmFindLibraryCommand.cxx b/Source/cmFindLibraryCommand.cxx
index 9368ff6..5bd68de 100644
--- a/Source/cmFindLibraryCommand.cxx
+++ b/Source/cmFindLibraryCommand.cxx
@@ -27,12 +27,12 @@ bool cmFindLibraryCommand::InitialPass(std::vector<std::string> const& argsIn)
     } 
   std::string helpString;
   size_t size = argsIn.size();
-  std::vector<std::string> args;
+  std::vector<std::string> argst;
   for(unsigned int j = 0; j < size; ++j)
     {
     if(argsIn[j] != "DOC")
       {
-      args.push_back(argsIn[j]);
+      argst.push_back(argsIn[j]);
       }
     else
       {
@@ -43,6 +43,8 @@ bool cmFindLibraryCommand::InitialPass(std::vector<std::string> const& argsIn)
       break;
       }
     }
+  std::vector<std::string> args;
+  cmSystemTools::ExpandListArguments(argst, args);
 
   std::vector<std::string> path;
   std::vector<std::string> names;
diff --git a/Source/cmFindPathCommand.cxx b/Source/cmFindPathCommand.cxx
index 0de6502..f4b2474 100644
--- a/Source/cmFindPathCommand.cxx
+++ b/Source/cmFindPathCommand.cxx
@@ -30,13 +30,13 @@ bool cmFindPathCommand::InitialPass(std::vector<std::string> const& argsIn)
   // already, if so use that value and don't look for the program
   std::string helpString = "What is the path where the file ";
   helpString += argsIn[1] + " can be found";
-  std::vector<std::string> args;
+  std::vector<std::string> argst;
   size_t size = argsIn.size();
   for(unsigned int j = 0; j < size; ++j)
     {
     if(argsIn[j] != "DOC")
       {
-      args.push_back(argsIn[j]);
+      argst.push_back(argsIn[j]);
       }
     else
       {
@@ -47,6 +47,9 @@ bool cmFindPathCommand::InitialPass(std::vector<std::string> const& argsIn)
       break;
       }
     }
+  std::vector<std::string> args;
+  cmSystemTools::ExpandListArguments(argst, args);
+
   const char* cacheValue
     = m_Makefile->GetDefinition(args[0].c_str());
   if(cacheValue && strcmp(cacheValue, "NOTFOUND"))
diff --git a/Source/cmFindProgramCommand.cxx b/Source/cmFindProgramCommand.cxx
index f614ed5..3d24899 100644
--- a/Source/cmFindProgramCommand.cxx
+++ b/Source/cmFindProgramCommand.cxx
@@ -30,12 +30,12 @@ bool cmFindProgramCommand::InitialPass(std::vector<std::string> const& argsIn)
     }
   std::string doc = "Path to a program.";
   size_t size = argsIn.size();
-  std::vector<std::string> args;
+  std::vector<std::string> argst;
   for(unsigned int j = 0; j < size; ++j)
     {
     if(argsIn[j] != "DOC")
       {
-      args.push_back(argsIn[j]);
+      argst.push_back(argsIn[j]);
       }
     else
       {
@@ -46,6 +46,10 @@ bool cmFindProgramCommand::InitialPass(std::vector<std::string> const& argsIn)
       break;
       }
     }
+  std::vector<std::string> args;
+  cmSystemTools::ExpandListArguments(argst, args);
+
+
   std::vector<std::string>::iterator i = args.begin();
   // Use the first argument as the name of something to be defined
   const char* define = (*i).c_str();
diff --git a/Source/cmGetSourceFilePropertyCommand.cxx b/Source/cmGetSourceFilePropertyCommand.cxx
index 12a6dcd..df8ca49 100644
--- a/Source/cmGetSourceFilePropertyCommand.cxx
+++ b/Source/cmGetSourceFilePropertyCommand.cxx
@@ -20,7 +20,7 @@
 bool cmGetSourceFilePropertyCommand::InitialPass(std::vector<std::string> const& 
                                                  args)
 {
-  if(args.size() < 3 )
+  if(args.size() != 3 )
     {
     this->SetError("called with incorrect number of arguments");
     return false;
@@ -38,7 +38,7 @@ bool cmGetSourceFilePropertyCommand::InitialPass(std::vector<std::string> const&
       {
       m_Makefile->AddDefinition(var, sf->GetWrapExclude());
       }
-    if(args[2] == "FLAGS")
+    if(args[2] == "COMPILE_FLAGS")
       {
       m_Makefile->AddDefinition(var, sf->GetCompileFlags());
       }
diff --git a/Source/cmGetSourceFilePropertyCommand.h b/Source/cmGetSourceFilePropertyCommand.h
index 483bd42..456f5ea 100644
--- a/Source/cmGetSourceFilePropertyCommand.h
+++ b/Source/cmGetSourceFilePropertyCommand.h
@@ -53,7 +53,7 @@ public:
   virtual const char* GetFullDocumentation()
     {
       return
-        "GET_SOURCE_FILE_PROPERTY(VAR file [ABSTRACT|WRAP_EXCLUDE|FLAGS]) "
+        "GET_SOURCE_FILE_PROPERTY(VAR file [ABSTRACT|WRAP_EXCLUDE|COMPILE_FLAGS]) "
         "Get a property from a source file.   The value of the property is stored  "
         "in the variable VAR.";
     }
diff --git a/Source/cmIncludeDirectoryCommand.cxx b/Source/cmIncludeDirectoryCommand.cxx
index 2984808..48d51fd 100644
--- a/Source/cmIncludeDirectoryCommand.cxx
+++ b/Source/cmIncludeDirectoryCommand.cxx
@@ -17,13 +17,15 @@
 #include "cmIncludeDirectoryCommand.h"
 #include "cmCacheManager.h"
 // cmIncludeDirectoryCommand
-bool cmIncludeDirectoryCommand::InitialPass(std::vector<std::string> const& args)
+bool cmIncludeDirectoryCommand::InitialPass(std::vector<std::string> const& argsIn)
 {
-  if(args.size() < 1 )
+  if(argsIn.size() < 1 )
     {
     this->SetError("called with incorrect number of arguments");
     return false;
     }
+  std::vector<std::string> args;
+  cmSystemTools::ExpandListArguments(argsIn, args);
 
   std::vector<std::string>::const_iterator i = args.begin();
 
diff --git a/Source/cmInstallFilesCommand.cxx b/Source/cmInstallFilesCommand.cxx
index 87cdd38..31aa5fa 100644
--- a/Source/cmInstallFilesCommand.cxx
+++ b/Source/cmInstallFilesCommand.cxx
@@ -18,13 +18,15 @@
 #include "cmCacheManager.h"
 
 // cmExecutableCommand
-bool cmInstallFilesCommand::InitialPass(std::vector<std::string> const& args)
+bool cmInstallFilesCommand::InitialPass(std::vector<std::string> const& argsIn)
 {
-  if(args.size() < 2)
+  if(argsIn.size() < 2)
     {
     this->SetError("called with incorrect number of arguments");
     return false;
     }
+  std::vector<std::string> args;
+  cmSystemTools::ExpandListArguments(argsIn, args);
 
   // Create an INSTALL_FILES target specifically for this path.
   m_TargetName = "INSTALL_FILES_"+args[0];
diff --git a/Source/cmInstallProgramsCommand.cxx b/Source/cmInstallProgramsCommand.cxx
index d805e30..6049bb0 100644
--- a/Source/cmInstallProgramsCommand.cxx
+++ b/Source/cmInstallProgramsCommand.cxx
@@ -18,13 +18,15 @@
 #include "cmCacheManager.h"
 
 // cmExecutableCommand
-bool cmInstallProgramsCommand::InitialPass(std::vector<std::string> const& args)
+bool cmInstallProgramsCommand::InitialPass(std::vector<std::string> const& argsIn)
 {
-  if(args.size() < 2)
+  if(argsIn.size() < 2)
     {
     this->SetError("called with incorrect number of arguments");
     return false;
     }
+  std::vector<std::string> args;
+  cmSystemTools::ExpandListArguments(argsIn, args);
 
   // Create an INSTALL_PROGRAMS target specifically for this path.
   m_TargetName = "INSTALL_PROGRAMS_"+args[0];
diff --git a/Source/cmInstallTargetsCommand.cxx b/Source/cmInstallTargetsCommand.cxx
index 88cd17c..e7e1bf6 100644
--- a/Source/cmInstallTargetsCommand.cxx
+++ b/Source/cmInstallTargetsCommand.cxx
@@ -18,13 +18,15 @@
 #include "cmCacheManager.h"
 
 // cmExecutableCommand
-bool cmInstallTargetsCommand::InitialPass(std::vector<std::string> const& args)
+bool cmInstallTargetsCommand::InitialPass(std::vector<std::string> const& argsIn)
 {
-  if(args.size() < 2 )
+  if(argsIn.size() < 2 )
     {
     this->SetError("called with incorrect number of arguments");
     return false;
     }
+  std::vector<std::string> args;
+  cmSystemTools::ExpandListArguments(argsIn, args);
 
   cmTargets &tgts = m_Makefile->GetTargets();
   std::vector<std::string>::const_iterator s = args.begin();
diff --git a/Source/cmLinkDirectoriesCommand.cxx b/Source/cmLinkDirectoriesCommand.cxx
index bf868b8..468fda2 100644
--- a/Source/cmLinkDirectoriesCommand.cxx
+++ b/Source/cmLinkDirectoriesCommand.cxx
@@ -17,13 +17,16 @@
 #include "cmLinkDirectoriesCommand.h"
 
 // cmLinkDirectoriesCommand
-bool cmLinkDirectoriesCommand::InitialPass(std::vector<std::string> const& args)
+bool cmLinkDirectoriesCommand::InitialPass(std::vector<std::string> const& argsIn)
 {
- if(args.size() < 1 )
+ if(argsIn.size() < 1 )
     {
     this->SetError("called with incorrect number of arguments");
     return false;
     }
+ std::vector<std::string> args;
+ cmSystemTools::ExpandListArguments(argsIn, args);
+
   for(std::vector<std::string>::const_iterator i = args.begin();
       i != args.end(); ++i)
     {
diff --git a/Source/cmLoadCacheCommand.cxx b/Source/cmLoadCacheCommand.cxx
index 988cec5..aa9186a 100644
--- a/Source/cmLoadCacheCommand.cxx
+++ b/Source/cmLoadCacheCommand.cxx
@@ -18,13 +18,15 @@
 
 
 // cmLoadcacheCommand
-bool cmLoadCacheCommand::InitialPass(std::vector<std::string> const& args)
+bool cmLoadCacheCommand::InitialPass(std::vector<std::string> const& argsIn)
 {
-  if (args.size()< 1)
+  if (argsIn.size()< 1)
     {
     this->SetError("called with wrong number of arguments.");
     }
-  
+  std::vector<std::string> args;
+  cmSystemTools::ExpandListArguments(argsIn, args);
+
   // Cache entries to be excluded from the import list.
   // If this set is empty, all cache entries are brought in
   // and they can not be overridden.
diff --git a/Source/cmMakeDirectoryCommand.cxx b/Source/cmMakeDirectoryCommand.cxx
index 4f7f8e7..6d919c7 100644
--- a/Source/cmMakeDirectoryCommand.cxx
+++ b/Source/cmMakeDirectoryCommand.cxx
@@ -20,7 +20,7 @@
 // cmMakeDirectoryCommand
 bool cmMakeDirectoryCommand::InitialPass(std::vector<std::string> const& args)
 {
-  if(args.size() < 1 )
+  if(args.size() != 1 )
     {
     this->SetError("called with incorrect number of arguments");
     return false;
diff --git a/Source/cmMarkAsAdvancedCommand.cxx b/Source/cmMarkAsAdvancedCommand.cxx
index 24c9b96..30a401c 100644
--- a/Source/cmMarkAsAdvancedCommand.cxx
+++ b/Source/cmMarkAsAdvancedCommand.cxx
@@ -17,13 +17,16 @@
 #include "cmMarkAsAdvancedCommand.h"
 
 // cmMarkAsAdvancedCommand
-bool cmMarkAsAdvancedCommand::InitialPass(std::vector<std::string> const& args)
+bool cmMarkAsAdvancedCommand::InitialPass(std::vector<std::string> const& argsIn)
 {
-  if(args.size() < 1 )
+  if(argsIn.size() < 1 )
     {
     this->SetError("called with incorrect number of arguments");
     return false;
     }
+  std::vector<std::string> args;
+  cmSystemTools::ExpandListArguments(argsIn, args);
+
   unsigned int i =0;
   const char* value = "1";
   bool overwrite = false;
diff --git a/Source/cmOutputRequiredFilesCommand.cxx b/Source/cmOutputRequiredFilesCommand.cxx
index 8fcba47..68a8862 100644
--- a/Source/cmOutputRequiredFilesCommand.cxx
+++ b/Source/cmOutputRequiredFilesCommand.cxx
@@ -159,7 +159,7 @@ void cmLBDepend::DependWalk(cmDependInformation* info)
 // cmOutputRequiredFilesCommand
 bool cmOutputRequiredFilesCommand::InitialPass(std::vector<std::string> const& args)
 {
-  if(args.size() < 2 )
+  if(args.size() != 2 )
     {
     this->SetError("called with incorrect number of arguments");
     return false;
diff --git a/Source/cmProjectCommand.cxx b/Source/cmProjectCommand.cxx
index 83fcc47..197bccc 100644
--- a/Source/cmProjectCommand.cxx
+++ b/Source/cmProjectCommand.cxx
@@ -19,7 +19,7 @@
 // cmProjectCommand
 bool cmProjectCommand::InitialPass(std::vector<std::string> const& args)
 {
-  if(args.size() < 1 || args.size() > 1)
+  if(args.size() != 1 )
     {
     this->SetError("PROJECT called with incorrect number of arguments");
     return false;
diff --git a/Source/cmQTWrapCPPCommand.cxx b/Source/cmQTWrapCPPCommand.cxx
index 0a82c26..df1ba0c 100644
--- a/Source/cmQTWrapCPPCommand.cxx
+++ b/Source/cmQTWrapCPPCommand.cxx
@@ -17,13 +17,15 @@
 #include "cmQTWrapCPPCommand.h"
 
 // cmQTWrapCPPCommand
-bool cmQTWrapCPPCommand::InitialPass(std::vector<std::string> const& args)
+bool cmQTWrapCPPCommand::InitialPass(std::vector<std::string> const& argsIn)
 {
-  if(args.size() < 3 )
+  if(argsIn.size() < 3 )
     {
     this->SetError("called with incorrect number of arguments");
     return false;
     }
+  std::vector<std::string> args;
+  cmSystemTools::ExpandListArguments(argsIn, args);
 
   // Now check and see if the value has been stored in the cache
   // already, if so use that value and don't look for the program
diff --git a/Source/cmQTWrapUICommand.cxx b/Source/cmQTWrapUICommand.cxx
index b34e36d..957816d 100644
--- a/Source/cmQTWrapUICommand.cxx
+++ b/Source/cmQTWrapUICommand.cxx
@@ -17,13 +17,15 @@
 #include "cmQTWrapUICommand.h"
 
 // cmQTWrapUICommand
-bool cmQTWrapUICommand::InitialPass(std::vector<std::string> const& args)
+bool cmQTWrapUICommand::InitialPass(std::vector<std::string> const& argsIn)
 {
-  if(args.size() < 4 )
+  if(argsIn.size() < 4 )
     {
     this->SetError("called with incorrect number of arguments");
     return false;
     }
+  std::vector<std::string> args;
+  cmSystemTools::ExpandListArguments(argsIn, args);
 
   // Now check and see if the value has been stored in the cache
   // already, if so use that value and don't look for the program
diff --git a/Source/cmSetSourceFilesPropertiesCommand.cxx b/Source/cmSetSourceFilesPropertiesCommand.cxx
index 06581eb..f065b45 100644
--- a/Source/cmSetSourceFilesPropertiesCommand.cxx
+++ b/Source/cmSetSourceFilesPropertiesCommand.cxx
@@ -18,14 +18,16 @@
 
 // cmSetSourceFilesPropertiesCommand
 bool cmSetSourceFilesPropertiesCommand::InitialPass(std::vector<std::string> const& 
-                                                 args)
+                                                 argsIn)
 {
-  if(args.size() < 2 )
+  if(argsIn.size() < 2 )
     {
     this->SetError("called with incorrect number of arguments");
     return false;
     }
-  
+  std::vector<std::string> args;
+  cmSystemTools::ExpandListArguments(argsIn, args);
+
   std::vector<std::string>::const_iterator j;
   // first collect up all the flags that need to be set on the file
   bool abstract = false;
@@ -46,7 +48,7 @@ bool cmSetSourceFilesPropertiesCommand::InitialPass(std::vector<std::string> con
       {
       generated = true;
       }
-    else if(*j == "FLAGS")
+    else if(*j == "COMPILE_FLAGS")
       {
       ++j;
       if(j == args.end())
@@ -61,7 +63,7 @@ bool cmSetSourceFilesPropertiesCommand::InitialPass(std::vector<std::string> con
   for(j = args.begin(); j != args.end(); ++j)
     {   
     // at the sign of the first property exit the loop
-    if(*j == "ABSTRACT" || *j == "WRAP_EXCLUDE" || *j == "FLAGS")
+    if(*j == "ABSTRACT" || *j == "WRAP_EXCLUDE" || *j == "COMPILE_FLAGS")
       {
       break;
       }
diff --git a/Source/cmSetSourceFilesPropertiesCommand.h b/Source/cmSetSourceFilesPropertiesCommand.h
index 7ad974b..cad2b4e 100644
--- a/Source/cmSetSourceFilesPropertiesCommand.h
+++ b/Source/cmSetSourceFilesPropertiesCommand.h
@@ -53,7 +53,7 @@ public:
   virtual const char* GetFullDocumentation()
     {
       return
-        "SET_SOURCE_FILES_PROPERTIES(flags file1 file2 [ABSTRACT|WRAP_EXCLUDE|GENERATED|FLAGS] [flags]) "
+        "SET_SOURCE_FILES_PROPERTIES(flags file1 file2 [ABSTRACT|WRAP_EXCLUDE|GENERATED|COMPILE_FLAGS] [flags]) "
         "Set properties on a file.   The syntax for the command is to list all the files you want "
         "to change, and then provide the values you want to set next.";
     }
diff --git a/Source/cmSiteNameCommand.cxx b/Source/cmSiteNameCommand.cxx
index 2cd18ce..f91599a 100644
--- a/Source/cmSiteNameCommand.cxx
+++ b/Source/cmSiteNameCommand.cxx
@@ -19,7 +19,7 @@
 // cmSiteNameCommand
 bool cmSiteNameCommand::InitialPass(std::vector<std::string> const& args)
 {
-  if(args.size() < 1 )
+  if(args.size() != 1 )
     {
     this->SetError("called with incorrect number of arguments");
     return false;
diff --git a/Source/cmSourceFilesCommand.cxx b/Source/cmSourceFilesCommand.cxx
index b582551..2740833 100644
--- a/Source/cmSourceFilesCommand.cxx
+++ b/Source/cmSourceFilesCommand.cxx
@@ -17,14 +17,16 @@
 #include "cmSourceFilesCommand.h"
 
 // cmSourceFilesCommand
-bool cmSourceFilesCommand::InitialPass(std::vector<std::string> const& args)
+bool cmSourceFilesCommand::InitialPass(std::vector<std::string> const& argsIn)
 {
-  if(args.size() < 1 )
+  if(argsIn.size() < 1 )
     {
     this->SetError("called with incorrect number of arguments");
     return false;
     }
-  
+  std::vector<std::string> args;
+  cmSystemTools::ExpandListArguments(argsIn, args);
+
   std::string name = args[0];
   
   int generated = 0;
diff --git a/Source/cmSourceFilesFlagsCommand.cxx b/Source/cmSourceFilesFlagsCommand.cxx
deleted file mode 100644
index 81a9114..0000000
--- a/Source/cmSourceFilesFlagsCommand.cxx
+++ /dev/null
@@ -1,49 +0,0 @@
-/*=========================================================================
-
-  Program:   Insight Segmentation & Registration Toolkit
-  Module:    $RCSfile$
-  Language:  C++
-  Date:      $Date$
-  Version:   $Revision$
-
-  Copyright (c) 2002 Insight Consortium. All rights reserved.
-  See ITKCopyright.txt or http://www.itk.org/HTML/Copyright.htm for details.
-
-     This software is distributed WITHOUT ANY WARRANTY; without even 
-     the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
-     PURPOSE.  See the above copyright notices for more information.
-
-=========================================================================*/
-#include "cmSourceFilesFlagsCommand.h"
-
-// cmSourceFilesFlagsCommand
-bool cmSourceFilesFlagsCommand::InitialPass(std::vector<std::string> const& 
-                                             args)
-{
-  if(args.size() < 2 )
-    {
-    this->SetError("called with incorrect number of arguments");
-    return false;
-    }
-  
-  std::vector<std::string>::const_iterator j = args.begin();
-  std::string flags = *j;
-  ++j;
-  for(;j != args.end(); ++j)
-    {   
-    cmSourceFile* sf = m_Makefile->GetSource(j->c_str());
-    if(sf)
-      {
-      sf->SetCompileFlags(flags.c_str());
-      }
-    else
-      {
-      std::string m = "could not find source file ";
-      m += *j;
-      this->SetError(m.c_str());
-      return false;
-      }
-    }
-  return true;
-}
-
diff --git a/Source/cmSourceFilesFlagsCommand.h b/Source/cmSourceFilesFlagsCommand.h
deleted file mode 100644
index a85230d..0000000
--- a/Source/cmSourceFilesFlagsCommand.h
+++ /dev/null
@@ -1,64 +0,0 @@
-/*=========================================================================
-
-  Program:   Insight Segmentation & Registration Toolkit
-  Module:    $RCSfile$
-  Language:  C++
-  Date:      $Date$
-  Version:   $Revision$
-
-  Copyright (c) 2002 Insight Consortium. All rights reserved.
-  See ITKCopyright.txt or http://www.itk.org/HTML/Copyright.htm for details.
-
-     This software is distributed WITHOUT ANY WARRANTY; without even 
-     the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
-     PURPOSE.  See the above copyright notices for more information.
-
-=========================================================================*/
-#ifndef cmSourceFilesFlagsCommand_h
-#define cmSourceFilesFlagsCommand_h
-
-#include "cmStandardIncludes.h"
-#include "cmCommand.h"
-
-class cmSourceFilesFlagsCommand : public cmCommand
-{
-public:
-  virtual cmCommand* Clone() 
-    {
-      return new cmSourceFilesFlagsCommand;
-    }
-
-  /**
-   * This is called when the command is first encountered in
-   * the input file.
-   */
-  virtual bool InitialPass(std::vector<std::string> const& args);
-
-  /**
-   * The name of the command as specified in CMakeList.txt.
-   */
-  virtual const char* GetName() { return "SOURCE_FILES_FLAGS";}
-
-  /**
-   * Succinct documentation.
-   */
-  virtual const char* GetTerseDocumentation() 
-    {
-    return "Set compile flags for a specific list of files.";
-    }
-  
-  /**
-   * Longer documentation.
-   */
-  virtual const char* GetFullDocumentation()
-    {
-      return
-        "SOURCE_FILES_FLAGS(flags file1 file2 ..)";
-    }
-  
-  cmTypeMacro(cmSourceFilesFlagsCommand, cmCommand);
-};
-
-
-
-#endif
diff --git a/Source/cmSourceFilesRemoveCommand.cxx b/Source/cmSourceFilesRemoveCommand.cxx
index ebd3c9d..b9d3fe1 100644
--- a/Source/cmSourceFilesRemoveCommand.cxx
+++ b/Source/cmSourceFilesRemoveCommand.cxx
@@ -17,13 +17,16 @@
 #include "cmSourceFilesRemoveCommand.h"
 
 // cmSourceFilesRemoveCommand
-bool cmSourceFilesRemoveCommand::InitialPass(std::vector<std::string> const& args)
+bool cmSourceFilesRemoveCommand::InitialPass(std::vector<std::string> const& argsIn)
 {
-  if(args.size() < 1 )
+  if(argsIn.size() < 1 )
     {
     this->SetError("called with incorrect number of arguments");
     return false;
     }
+  std::vector<std::string> args;
+  cmSystemTools::ExpandListArguments(argsIn, args);
+
   int generated = 0;
   for(std::vector<std::string>::const_iterator i = (args.begin() + 1);
       i != args.end(); ++i)
diff --git a/Source/cmSubdirCommand.cxx b/Source/cmSubdirCommand.cxx
index f5825b4..88e362d 100644
--- a/Source/cmSubdirCommand.cxx
+++ b/Source/cmSubdirCommand.cxx
@@ -17,13 +17,16 @@
 #include "cmSubdirCommand.h"
 
 // cmSubdirCommand
-bool cmSubdirCommand::InitialPass(std::vector<std::string> const& args)
+bool cmSubdirCommand::InitialPass(std::vector<std::string> const& argsIn)
 {
-  if(args.size() < 1 )
+  if(argsIn.size() < 1 )
     {
     this->SetError("called with incorrect number of arguments");
     return false;
     }
+  std::vector<std::string> args;
+  cmSystemTools::ExpandListArguments(argsIn, args);
+
   for(std::vector<std::string>::const_iterator i = args.begin();
       i != args.end(); ++i)
     {
diff --git a/Source/cmSystemTools.cxx b/Source/cmSystemTools.cxx
index 6f34c8e..2e330fc 100644
--- a/Source/cmSystemTools.cxx
+++ b/Source/cmSystemTools.cxx
@@ -1045,10 +1045,16 @@ bool RunCommandViaSystem(const char* command,
     cmSystemTools::RemoveFile(tempFile.c_str());
     return false;
     }
+  bool multiLine = false;
   while(fin)
     {
     fin.getline(buffer, BUFFER_SIZE);
     output += buffer;
+    if(multiLine)
+      {
+      output += "\n";
+      }
+    multiLine = true;
     }
   fin.close();
   cmSystemTools::RemoveFile(tempFile.c_str());
@@ -1609,8 +1615,7 @@ void cmSystemTools::GlobDirs(const char *fullPath,
 
 
 void cmSystemTools::ExpandListArguments(std::vector<std::string> const& arguments, 
-                                        std::vector<std::string>& newargs,
-                                        bool ignore_empty)
+                                        std::vector<std::string>& newargs)
 {
   std::vector<std::string>::const_iterator i;
   for(i = arguments.begin();i != arguments.end(); ++i)
@@ -1631,7 +1636,7 @@ void cmSystemTools::ExpandListArguments(std::vector<std::string> const& argument
           {
           len = i->size()-start;
           }
-        if (ignore_empty == false || len > 0)
+        if (len > 0)
           {
           newargs.push_back(i->substr(start, len));
           }
diff --git a/Source/cmSystemTools.h b/Source/cmSystemTools.h
index b9f6842..9cbd62a 100644
--- a/Source/cmSystemTools.h
+++ b/Source/cmSystemTools.h
@@ -48,8 +48,7 @@ public:
    *  containing the expanded versions of all arguments in argsIn.
    */
   static void ExpandListArguments(std::vector<std::string> const& argsIn,
-                                  std::vector<std::string>& argsOut,
-                                  bool ignore_empty = false);
+                                  std::vector<std::string>& argsOut);
 
   /**
    * Look for and replace registry values in a string
diff --git a/Source/cmUseMangledMesaCommand.cxx b/Source/cmUseMangledMesaCommand.cxx
index a762fa1..413d8a4 100644
--- a/Source/cmUseMangledMesaCommand.cxx
+++ b/Source/cmUseMangledMesaCommand.cxx
@@ -23,7 +23,7 @@ bool cmUseMangledMesaCommand::InitialPass(std::vector<std::string> const& args)
   // expected two arguments:
   // arguement one: the full path to gl_mangle.h
   // arguement two : directory for output of edited headers
-  if(args.size() < 2)
+  if(args.size() != 2)
     {
     this->SetError("called with incorrect number of arguments");
     return false;
diff --git a/Source/cmUseMangledMesaCommand.h b/Source/cmUseMangledMesaCommand.h
index 19b635b..a96d3c4 100644
--- a/Source/cmUseMangledMesaCommand.h
+++ b/Source/cmUseMangledMesaCommand.h
@@ -62,8 +62,8 @@ public:
   virtual const char* GetFullDocumentation()
     {
     return
-      "USE_MANGLED_MESA(\"path to mesa includes, should contain gl_mangle.h\""
-      " \"directory for output\"  )";
+      "USE_MANGLED_MESA(PATH_TO_MESA OUTPUT_DIRECTORY)\n"
+      "The path to mesa includes, should contain gl_mangle.h. ";
     }
 
 protected:
diff --git a/Source/cmUtilitySourceCommand.cxx b/Source/cmUtilitySourceCommand.cxx
index 6672dbd..0bcae65 100644
--- a/Source/cmUtilitySourceCommand.cxx
+++ b/Source/cmUtilitySourceCommand.cxx
@@ -17,14 +17,16 @@
 #include "cmUtilitySourceCommand.h"
 
 // cmUtilitySourceCommand
-bool cmUtilitySourceCommand::InitialPass(std::vector<std::string> const& args)
+bool cmUtilitySourceCommand::InitialPass(std::vector<std::string> const& argsIn)
 {
-  if(args.size() < 3)
+  if(argsIn.size() < 3)
     {
     this->SetError("called with incorrect number of arguments");
     return false;
     }
-  
+  std::vector<std::string> args;
+  cmSystemTools::ExpandListArguments(argsIn, args);
+
   std::vector<std::string>::const_iterator arg = args.begin();
   
   // The first argument is the cache entry name.
diff --git a/Source/cmVTKMakeInstantiatorCommand.cxx b/Source/cmVTKMakeInstantiatorCommand.cxx
index 3294bc4..b1c8157 100644
--- a/Source/cmVTKMakeInstantiatorCommand.cxx
+++ b/Source/cmVTKMakeInstantiatorCommand.cxx
@@ -20,14 +20,16 @@
 
 bool
 cmVTKMakeInstantiatorCommand
-::InitialPass(std::vector<std::string> const& args)
+::InitialPass(std::vector<std::string> const& argsIn)
 {
-  if(args.size() < 3)
+  if(argsIn.size() < 3)
     {
     this->SetError("called with incorrect number of arguments");
     return false;
     }
-  
+  std::vector<std::string> args;
+  cmSystemTools::ExpandListArguments(argsIn, args);
+
   m_ClassName = args[0];
   
   std::string outSourceList = args[1];
diff --git a/Source/cmVTKWrapJavaCommand.cxx b/Source/cmVTKWrapJavaCommand.cxx
index 49b374e..84634a2 100644
--- a/Source/cmVTKWrapJavaCommand.cxx
+++ b/Source/cmVTKWrapJavaCommand.cxx
@@ -17,13 +17,15 @@
 #include "cmVTKWrapJavaCommand.h"
 
 // cmVTKWrapJavaCommand
-bool cmVTKWrapJavaCommand::InitialPass(std::vector<std::string> const& args)
+bool cmVTKWrapJavaCommand::InitialPass(std::vector<std::string> const& argsIn)
 {
-  if(args.size() < 3 )
+  if(argsIn.size() < 3 )
     {
     this->SetError("called with incorrect number of arguments");
     return false;
     }
+  std::vector<std::string> args;
+  cmSystemTools::ExpandListArguments(argsIn, args);
 
   // Now check and see if the value has been stored in the cache
   // already, if so use that value and don't look for the program
diff --git a/Source/cmVTKWrapPythonCommand.cxx b/Source/cmVTKWrapPythonCommand.cxx
index ad595e7..7748942 100644
--- a/Source/cmVTKWrapPythonCommand.cxx
+++ b/Source/cmVTKWrapPythonCommand.cxx
@@ -17,13 +17,15 @@
 #include "cmVTKWrapPythonCommand.h"
 
 // cmVTKWrapPythonCommand
-bool cmVTKWrapPythonCommand::InitialPass(std::vector<std::string> const& args)
+bool cmVTKWrapPythonCommand::InitialPass(std::vector<std::string> const& argsIn)
 {
-  if(args.size() < 3 )
+  if(argsIn.size() < 3 )
     {
     this->SetError("called with incorrect number of arguments");
     return false;
     }
+  std::vector<std::string> args;
+  cmSystemTools::ExpandListArguments(argsIn, args);
 
   // Now check and see if the value has been stored in the cache
   // already, if so use that value and don't look for the program
diff --git a/Source/cmVTKWrapTclCommand.cxx b/Source/cmVTKWrapTclCommand.cxx
index 0f9b524..f7f0f26 100644
--- a/Source/cmVTKWrapTclCommand.cxx
+++ b/Source/cmVTKWrapTclCommand.cxx
@@ -17,14 +17,15 @@
 #include "cmVTKWrapTclCommand.h"
 
 // cmVTKWrapTclCommand
-bool cmVTKWrapTclCommand::InitialPass(std::vector<std::string> const& args)
+bool cmVTKWrapTclCommand::InitialPass(std::vector<std::string> const& argsIn)
 {
-  if(args.size() < 3 )
+  if(argsIn.size() < 3 )
     {
     this->SetError("called with incorrect number of arguments");
     return false;
     }
-
+  std::vector<std::string> args;
+  cmSystemTools::ExpandListArguments(argsIn, args);
   // keep the library name
   m_LibraryName = args[0];
 
diff --git a/Source/cmVariableRequiresCommand.cxx b/Source/cmVariableRequiresCommand.cxx
index 69b01dc..6d89c0d 100644
--- a/Source/cmVariableRequiresCommand.cxx
+++ b/Source/cmVariableRequiresCommand.cxx
@@ -25,7 +25,7 @@ bool cmVariableRequiresCommand::InitialPass(std::vector<std::string> const& args
     this->SetError("called with incorrect number of arguments");
     return false;
     }
-  m_Arguments = args;
+  cmSystemTools::ExpandListArguments(args, m_Arguments);
   return true;
 }
 
diff --git a/Source/cmWrapExcludeFilesCommand.cxx b/Source/cmWrapExcludeFilesCommand.cxx
index 153d30e..9e020d1 100644
--- a/Source/cmWrapExcludeFilesCommand.cxx
+++ b/Source/cmWrapExcludeFilesCommand.cxx
@@ -17,14 +17,15 @@
 #include "cmWrapExcludeFilesCommand.h"
 
 // cmWrapExcludeFilesCommand
-bool cmWrapExcludeFilesCommand::InitialPass(std::vector<std::string> const& args)
+bool cmWrapExcludeFilesCommand::InitialPass(std::vector<std::string> const& argsIn)
 {
-  if(args.size() < 1 )
+  if(argsIn.size() < 1 )
     {
     this->SetError("called with incorrect number of arguments");
     return false;
     }
-
+  std::vector<std::string> args; 
+  cmSystemTools::ExpandListArguments(argsIn, args);
   cmMakefile::SourceMap &Classes = m_Makefile->GetSources();
   for(std::vector<std::string>::const_iterator j = args.begin();
       j != args.end(); ++j)