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Run the `clang-format.bash` script to update our C and C++ code to a new
include order `.clang-format`. Use `clang-format` version 6.0.
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* Print message when using the table
* Remove duplicated comment
* Remove HAVE_LOG and HAVE_EXP checks, use generated table instead
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* Updated output message
* Use 'target_compile_definitions' for HAVE_LOG and HAVE_EXP
Previously, the change from using TutorialConfig.h to
target_compile_definitions happened without explanation as part of Step 8.
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Migrate tutorial text from individual `directions.txt` files to the main
tutorial document. Add some comments to source code to provide anchors
for inclusion.
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