Release-1.3.9.1

18 files changed, 269 insertions, 141 deletions

diff --git a/Doxyfile b/Doxyfile
index c7da9e2..181117b 100644
--- a/Doxyfile
+++ b/Doxyfile
@@ -83,7 +83,6 @@ EXCLUDE                = src/code.cpp \
                          src/tag.cpp \
                          src/doctokenizer.cpp \
                          src/logos.cpp \
-                         src/doxysearch.cpp \
                          src/suffixtree.cpp \
                          src/suffixtree.h \
                          src/searchindex.cpp \
diff --git a/INSTALL b/INSTALL
index 5e1a6b0..592b16b 100644
--- a/INSTALL
+++ b/INSTALL
@@ -1,7 +1,7 @@
-DOXYGEN Version 1.3.9
+DOXYGEN Version 1.3.9.1
 
 Please read the installation section of the manual 
 (http://www.doxygen.org/install.html) for instructions.
 
 --------
-Dimitri van Heesch (05 October 2004)
+Dimitri van Heesch (10 October 2004)
diff --git a/README b/README
index 20f8995..a7742db 100644
--- a/README
+++ b/README
@@ -1,4 +1,4 @@
-DOXYGEN Version 1.3.9
+DOXYGEN Version 1.3.9.1
 
 Please read INSTALL for compilation instructions.
 
@@ -17,4 +17,4 @@ to subscribe to the lists or to visit the archives.
 
 Enjoy,
 
-Dimitri van Heesch (dimitri@stack.nl) (05 October 2004)
+Dimitri van Heesch (dimitri@stack.nl) (10 October 2004)
diff --git a/VERSION b/VERSION
index d4c4950..c4d3ba9 100644
--- a/VERSION
+++ b/VERSION
@@ -1 +1 @@
-1.3.9
+1.3.9.1
diff --git a/doc/faq.doc b/doc/faq.doc
index af779ae..8bfc3ae 100644
--- a/doc/faq.doc
+++ b/doc/faq.doc
@@ -211,11 +211,11 @@ If you don't mind spending some time on it, there are several options:
  "input buffer overflow, can't enlarge buffer because scanner uses REJECT"</b>
 
 This error happens when doxygen lexical scanner has a rule that matches
-more than 16K of input characters in one go. I've seen this happening 
-on a very large generated file (\>16K lines), where the built-in preprocessor 
-converted it into an empty file (with \>16K of newlines). Another case
+more than 256K of input characters in one go. I've seen this happening 
+on a very large generated file (\>256K lines), where the built-in preprocessor 
+converted it into an empty file (with \>256K of newlines). Another case
 where this might happen is if you have lines in your code with more than
-16K characters. 
+256K characters. 
 
 If you have run into such a case and want me to fix it, you
 should send me a code fragment that triggers the message. To work around
@@ -263,6 +263,19 @@ namespace std {
 I'm still looking for someone who can provide me with definitions
 for all (relevant) STL classes.
 
+<li><b>Can I configure doxygen from the command line?</b>
+
+Not via command line options, but doxygen can read from <code>stdin</code>,
+so you can pipe things through it. Here's an example how to override an option
+in a configuration file from the command line (assuming a unix environment):
+
+\verbatim
+( cat Doxyfile ; echo "PROJECT_NUMBER=1.0" ) | doxygen -
+\endverbatim
+
+If multiple options with the same name are specified then doxygen will use 
+the last one. To append to an existing option you can use the += operator.
+
 <li><b>How did doxygen get its name?</b>
 
 Doxygen got its name from playing with the words 
diff --git a/doc/translator.py b/doc/translator.py
index 81c2fe6..a3f7c93 100644
--- a/doc/translator.py
+++ b/doc/translator.py
@@ -10,7 +10,7 @@
   translator report only for some languages, pass their codes as arguments
   to the script. In that case, the language.doc will not be generated.
   Example:
-      
+  
     python translator.py en nl cz
   
   Originally, the script was written in Perl and was known as translator.pl.
@@ -44,6 +44,7 @@
                explicitly via script arguments.
   2004/07/26 - Better reporting of not-needed adapters.
   2004/10/04 - Reporting of not called translator methods added.
+  2004/10/05 - Modified to check only doxygen/src sources for the previous report.
   """                               
 
 from __future__ import generators
@@ -1204,7 +1205,7 @@ class TrManager:
         # script, of the translator.h, of the translator_adapter.h (see the 
         # self.__build() for the last two) of all the translator_xx.h files
         # and of the template for generating the documentation. So, this
-        # time can compared with modification time of the generated 
+        # time can be compared with modification time of the generated 
         # documentation to decide, whether the doc should be re-generated.
         self.lastModificationTime = os.path.getmtime(self.script)
         
@@ -1361,26 +1362,24 @@ class TrManager:
     def __getNoTrSourceFilesLst(self):
         """Returns the list of sources to be checked.
         
-        All .cpp files and also .h files that do not declare and define
+        All .cpp files and also .h files that do not declare or define
         the translator methods are included in the list. The file names 
-        are searched in doxygen directory recursively.""" 
-        lst = []
-        for path, dirs, files in os.walk(self.doxy_path):
-            
-            # Files in doxygen/src should be processed first.
-            if path == self.doxy_path:
-                dirs.remove('src')
-                dirs.insert(0, 'src')
+        are searched in doxygen/src directory.
+        """ 
+        srcdir = os.path.join(self.doxy_path, 'src')
+        files = []
+        for item in os.listdir(srcdir):
+            # Split the bare name to get the extension.
+            name, ext = os.path.splitext(item)
+            ext = ext.lower()
             
-            # Search for names with .cpp extension (case independent)
-            # and append them to the output list.
-            for fname in files:
-                name, ext = os.path.splitext(fname)
-                ext = ext.lower()
-                if ext == '.cpp' or (ext == '.h' and name.find('translator') == -1):
-                    lst.append(os.path.join(path, fname))
-                    
-        return lst
+            # Include only .cpp and .h files (case independent) and exclude
+            # the files where the checked identifiers are defined.
+            if ext == '.cpp' or (ext == '.h' and name.find('translator') == -1):
+                fname = os.path.join(srcdir, item)
+                assert os.path.isfile(fname) # assumes no directory with the ext
+                files.append(fname)          # full name
+        return files
         
     
     def __removeUsedInFiles(self, fname, dic):
@@ -1562,12 +1561,12 @@ class TrManager:
         if not self.script_argLst:
             dic = self.__checkForNotUsedTrMethods()
             if dic:
-                s = '''WARNING FOR DEVELOPERS: The following translator 
-                    methods are declared in the Translator class but their 
-                    identifiers do not appear in source files. The situation
-                    should be checked. The .cpp files and .h files excluding
-                    the 'translator*.h' files were simply searched for 
-                    occurence of the method identifiers:'''
+                s = '''WARNING: The following translator methods are declared
+                    in the Translator class but their identifiers do not appear 
+                    in source files. The situation should be checked. The .cpp 
+                    files and .h files excluding the '*translator*' files 
+                    in doxygen/src directory were simply searched for occurence 
+                    of the method identifiers:'''
                 f.write('\n' + '=' * 70 + '\n')
                 f.write(fill(s) + '\n\n')
                 
diff --git a/doc/translator_report.txt b/doc/translator_report.txt
index 2c73b00..9a6959f 100644
--- a/doc/translator_report.txt
+++ b/doc/translator_report.txt
@@ -65,6 +65,25 @@ version of the translator for the language:
   TranslatorKoreanEn	implements 5 methods
 
 ======================================================================
+WARNING: The following translator methods are declared in the
+Translator class but their identifiers do not appear in source files.
+The situation should be checked. The .cpp files and .h files excluding
+the '*translator*' files in doxygen/src directory were simply searched
+for occurence of the method identifiers:
+
+  QCString trBugsAndLimitations()
+  QCString trEnumerationValueDocumentation()
+  QCString trField(bool, bool)
+  QCString trHeaderFiles()
+  QCString trHeaderFilesDescription()
+  QCString trInterfaces()
+  QCString trNoDescriptionAvailable()
+  QCString trPackageDocumentation()
+  QCString trReimplementedForInternalReasons()
+  QCString trSources()
+
+
+======================================================================
 Details for translators (classes sorted alphabetically):
 
 
diff --git a/packages/rpm/doxygen.spec b/packages/rpm/doxygen.spec
index ab7eccd..20c6268 100644
--- a/packages/rpm/doxygen.spec
+++ b/packages/rpm/doxygen.spec
@@ -1,6 +1,6 @@
 Summary: A documentation system for C/C++.
 Name: doxygen
-Version: 1.3.9
+Version: 1.3.9.1
 Release: 1
 Epoch: 1
 Source0: ftp://ftp.stack.nl/pub/users/dimitri/%{name}-%{version}.src.tar.gz
diff --git a/src/code.l b/src/code.l
index fd47652..cefd8bb 100644
--- a/src/code.l
+++ b/src/code.l
@@ -843,18 +843,18 @@ static void generateClassOrGlobalLink(BaseCodeDocInterface &ol,char *clName,
   }
 }
 
-static bool getLink(const char *className,
-                    const char *memberName,
-		    BaseCodeDocInterface &ol,
-		    const char *text=0)
+static bool getLinkInScope(const QCString &c,  // scope
+                           const QCString &m,  // member
+			   const char *memberText, // exact text
+			   BaseCodeDocInterface &ol,
+			   const char *text
+			  )
 {
   MemberDef    *md;
   ClassDef     *cd;
   FileDef      *fd;
   NamespaceDef *nd;
   GroupDef     *gd;
-  QCString m=removeRedundantWhiteSpace(memberName);
-  QCString c=className;
   //printf("Trying `%s'::`%s'\n",c.data(),m.data());
   if (getDefs(c,m,"()",md,cd,fd,nd,gd,FALSE,g_sourceFileDef) && 
       md->isLinkable())
@@ -894,14 +894,34 @@ static bool getLink(const char *className,
       writeMultiLineCodeLink(ol,md->getReference(),
 	                        md->getOutputFileBase(),
 	                        md->anchor(),
-				text ? text : memberName);
-      addToSearchIndex(text ? text : memberName);
+				text ? text : memberText);
+      addToSearchIndex(text ? text : memberText);
       return TRUE;
     } 
   }
   return FALSE;
 }
 
+static bool getLink(const char *className,
+                    const char *memberName,
+		    BaseCodeDocInterface &ol,
+		    const char *text=0)
+{
+  QCString m=removeRedundantWhiteSpace(memberName);
+  QCString c=className;
+  if (!getLinkInScope(c,m,memberName,ol,text))
+  {
+    if (!g_curClassName.isEmpty())
+    {
+      if (!c.isEmpty()) c.prepend("::");
+      c.prepend(g_curClassName);
+      return getLinkInScope(c,m,memberName,ol,text);
+    }
+    return FALSE;
+  }
+  return TRUE;
+}
+
 static bool generateClassMemberLink(BaseCodeDocInterface &ol,ClassDef *mcd,const char *memName)
 {
   if (mcd)
@@ -1761,7 +1781,7 @@ CHARLIT   (("'"\\[0-7]{1,3}"'")|("'"\\."'")|("'"[^' \\\n]{1,4}"'"))
   					  BEGIN( Body ); 
 					}
 <ClassName,ClassVar>[*&]+       	{
-  					  g_type=g_curClassName;
+  					  g_type=g_curClassName.copy();
   					  g_name.resize(0);
 					  g_code->codify(yytext);
 					  BEGIN( Body ); // variable of type struct *
diff --git a/src/definition.cpp b/src/definition.cpp
index 57d585e..4470bf2 100644
--- a/src/definition.cpp
+++ b/src/definition.cpp
@@ -164,7 +164,9 @@ void Definition::writeDocAnchorsToTagFile()
       {
         //printf("write an entry!\n");
         if (definitionType()==TypeMember) Doxygen::tagFile << "  ";
-        Doxygen::tagFile << "    <docanchor>" << si->label << "</docanchor>" << endl;
+        Doxygen::tagFile << "    <docanchor file=\"" 
+                         << si->fileName << "\">" << si->label 
+                         << "</docanchor>" << endl;
       }
     }
   }
diff --git a/src/doxygen.cpp b/src/doxygen.cpp
index 00d4dde..57ad6a8 100644
--- a/src/doxygen.cpp
+++ b/src/doxygen.cpp
@@ -1021,11 +1021,13 @@ static void buildNamespaceList(Entry *root)
       else // fresh namespace
       {
         QCString tagName;
+        QCString tagFileName;
         if (root->tagInfo)
         {
           tagName=root->tagInfo->tagName;
+          tagFileName=root->tagInfo->fileName;
         }
-        NamespaceDef *nd=new NamespaceDef(root->fileName,root->startLine,fullName,tagName);
+        NamespaceDef *nd=new NamespaceDef(root->fileName,root->startLine,fullName,tagName,tagFileName);
         nd->setDocumentation(root->doc,root->docFile,root->docLine); // copy docs to definition
         nd->setBriefDescription(root->brief,root->briefFile,root->briefLine);
         nd->addSectionsToDefinition(root->anchors);
@@ -1143,8 +1145,7 @@ static void findUsingDirectives(Entry *root)
       }
       else // unknown namespace, but add it anyway.
       {
-        NamespaceDef *nd=new NamespaceDef(
-            root->fileName,root->startLine,name);
+        NamespaceDef *nd=new NamespaceDef(root->fileName,root->startLine,name);
         nd->setDocumentation(root->doc,root->docFile,root->docLine); // copy docs to definition
         nd->setBriefDescription(root->brief,root->briefFile,root->briefLine);
         nd->addSectionsToDefinition(root->anchors);
@@ -4241,6 +4242,49 @@ static bool findGlobalMember(Entry *root,
   return TRUE;
 }
 
+static QCString substituteTemplatesInString(
+    const QList<ArgumentList> &srcTempArgLists,
+    const QList<ArgumentList> &dstTempArgLists,
+    const QCString &src
+    )
+{
+  QCString dst;
+  QRegExp re(idMask);
+  //printf("type=%s\n",sa->type.data());
+
+  int i,p=0,l; 
+  while ((i=re.match(src,p,&l))!=-1) // for each word in srcType
+  {
+    bool found=FALSE;
+    dst+=src.mid(p,i-p);
+    QCString name=src.mid(i,l);
+
+    QListIterator<ArgumentList> srclali(srcTempArgLists);
+    QListIterator<ArgumentList> dstlali(dstTempArgLists);
+    for (;srclali.current() && !found;++srclali,++dstlali)
+    {
+      ArgumentListIterator tsali(*srclali.current());
+      ArgumentListIterator tdali(*dstlali.current());
+      Argument *tsa =0,*tda=0;
+
+      for (tsali.toFirst();(tsa=tsali.current()) && !found;++tsali)
+      {
+        tda = tdali.current();
+        if (tda && name==tsa->name)
+        {
+          name=tda->name; // substitute
+          found=TRUE;
+        }
+        if (tda) ++tdali;
+      }
+    }
+    dst+=name; 
+    p=i+l;
+  }
+  dst+=src.right(src.length()-p);
+  return dst;
+}
+
 static void substituteTemplatesInArgList(
                   const QList<ArgumentList> &srcTempArgLists,
                   const QList<ArgumentList> &dstTempArgLists,
@@ -4253,51 +4297,22 @@ static void substituteTemplatesInArgList(
 
   for (sali.toFirst();(sa=sali.current());++sali) // for each member argument
   {
-    QCString srcType = sa->type;
-    QRegExp re(idMask);
-    //printf("type=%s\n",sa->type.data());
-
-    int i,p=0,l; 
-    QCString dstType;
-    while ((i=re.match(srcType,p,&l))!=-1) // for each word in srcType
-    {
-      bool found=FALSE;
-      dstType+=srcType.mid(p,i-p);
-      QCString name=srcType.mid(i,l);
-
-      QListIterator<ArgumentList> srclali(srcTempArgLists);
-      QListIterator<ArgumentList> dstlali(dstTempArgLists);
-      for (;srclali.current() && !found;++srclali,++dstlali)
-      {
-        ArgumentListIterator tsali(*srclali.current());
-        ArgumentListIterator tdali(*dstlali.current());
-        Argument *tsa =0,*tda=0;
-
-        for (tsali.toFirst();(tsa=tsali.current()) && !found;++tsali)
-        {
-          tda = tdali.current();
-          if (tda && name==tsa->name)
-          {
-            name=tda->name; // substitute
-            found=TRUE;
-          }
-          if (tda) ++tdali;
-        }
-      }
-      dstType+=name; 
-      p=i+l;
-    }
-    dstType+=srcType.right(srcType.length()-p);
+    QCString dstType = substituteTemplatesInString(
+                                  srcTempArgLists,dstTempArgLists,sa->type);
+    QCString dstArray = substituteTemplatesInString(
+                                  srcTempArgLists,dstTempArgLists,sa->array);
     if (da==0)
     {
       da=new Argument(*sa);
       dst->append(da);
       da->type=dstType;
+      da->array=dstArray;
       da=0;
     }
     else
     {
       da->type=dstType;
+      da->type=dstArray;
       da=dst->next();
     }
   }
diff --git a/src/htmlgen.cpp b/src/htmlgen.cpp
index 87b168d..8223562 100644
--- a/src/htmlgen.cpp
+++ b/src/htmlgen.cpp
@@ -1145,7 +1145,7 @@ void HtmlGenerator::startParameterType(bool first,const char *key)
     t << "          <td class=\"md\" nowrap align=\"right\">";
     if (key) t << key;
     t << "</td>" << endl;
-    t << "          <td></td>" << endl;
+    t << "          <td class=\"md\"></td>" << endl;
     t << "          <td class=\"md\" nowrap>";
   }
 }
@@ -1185,7 +1185,7 @@ void HtmlGenerator::endParameterName(bool last,bool emptyList,bool closeBracket)
       t << "</td>" << endl;
       t << "        </tr>" << endl;
       t << "        <tr>" << endl;
-      t << "          <td></td>" << endl;
+      t << "          <td class=\"md\"></td>" << endl;
       t << "          <td class=\"md\">";
       if (closeBracket) t << ")";
       t << "&nbsp;</td>" << endl;
diff --git a/src/namespacedef.cpp b/src/namespacedef.cpp
index ee4c48b..77779be 100644
--- a/src/namespacedef.cpp
+++ b/src/namespacedef.cpp
@@ -29,11 +29,19 @@
 #include "searchindex.h"
 
 NamespaceDef::NamespaceDef(const char *df,int dl,
-                           const char *name,const char *lref) : 
+                           const char *name,const char *lref,
+                           const char *fName) : 
    Definition(df,dl,name)
 {
-  fileName="namespace";
-  fileName+=name;
+  if (fName)
+  {
+    fileName = stripExtension(fName);
+  }
+  else
+  {
+    fileName="namespace";
+    fileName+=name;
+  }
   classSDict = new ClassSDict(17);
   namespaceSDict = new NamespaceSDict(17);
   m_innerCompounds = new SDict<Definition>(257);
@@ -414,7 +422,14 @@ void NamespaceDef::addUsingDeclaration(Definition *d)
 
 QCString NamespaceDef::getOutputFileBase() const 
 { 
-  return convertNameToFile(fileName); 
+  if (isReference())
+  {
+    return fileName;
+  }
+  else
+  {
+    return convertNameToFile(fileName); 
+  }
 }
 
 Definition *NamespaceDef::findInnerCompound(const char *n)
diff --git a/src/namespacedef.h b/src/namespacedef.h
index 51d30d2..4432539 100644
--- a/src/namespacedef.h
+++ b/src/namespacedef.h
@@ -38,7 +38,8 @@ class NamespaceDef : public Definition
 {
   public:
     NamespaceDef(const char *defFileName,int defLine,
-                 const char *name,const char *ref=0);
+                 const char *name,const char *ref=0,
+                 const char *refFile=0);
    ~NamespaceDef();
     DefType definitionType() { return TypeNamespace; }
     QCString getOutputFileBase() const;
diff --git a/src/pre.l b/src/pre.l
index a01b06f..8266c1c 100644
--- a/src/pre.l
+++ b/src/pre.l
@@ -856,9 +856,15 @@ QCString removeIdsAndMarkers(const char *s)
 	  }
 	  p++;
 	}
+	else // oops, not comment but division
+	{
+	  result+=pc;
+	  goto nextChar;
+	}
       }
       else 
       {
+nextChar:
 	result+=c;
 	char lc=tolower(c);
 	if (!isId(lc) && lc!='.' && lc!='-' && lc!='+') inNum=FALSE;
@@ -1507,6 +1513,7 @@ CHARLIT   (("'"\\[0-7]{1,3}"'")|("'"\\."'")|("'"[^'\\\n]{1,4}"'"))
 <Guard>"defined"/{B}+			{
     					  BEGIN(DefinedExpr1);
     					}
+<Guard>{ID}				{ g_guardExpr+=yytext; }
 <Guard>.				{ g_guardExpr+=*yytext; }
 <Guard>\n				{
   					  outputChar('\n');
diff --git a/src/tagreader.cpp b/src/tagreader.cpp
index b629373..1b971a2 100644
--- a/src/tagreader.cpp
+++ b/src/tagreader.cpp
@@ -35,6 +35,22 @@
 #include "defargs.h"
 //#include "reflist.h"
 
+/*! Information about an linkable anchor */
+class TagAnchorInfo
+{
+  public:
+    TagAnchorInfo(const QString &f,const QString &l) : label(l), fileName(f) {}
+    QString label;
+    QString fileName;
+};
+
+class TagAnchorInfoList : public QList<TagAnchorInfo>
+{
+  public: 
+    TagAnchorInfoList() : QList<TagAnchorInfo>() { setAutoDelete(TRUE); }
+    virtual ~TagAnchorInfoList() {}
+};
+
 /*! Container for member specific info that can be read from a tagfile */
 class TagMemberInfo
 {
@@ -45,7 +61,7 @@ class TagMemberInfo
     QString anchor;
     QString arglist;
     QString kind;
-    QStrList docAnchors;
+    TagAnchorInfoList docAnchors;
     Protection prot;
     Specifier virt;
     bool isStatic; 
@@ -60,7 +76,7 @@ class TagClassInfo
    ~TagClassInfo() { delete bases; delete templateArguments; }
     QString name;
     QString filename;
-    QStrList docAnchors;
+    TagAnchorInfoList docAnchors;
     QList<BaseInfo> *bases;
     QList<TagMemberInfo> members;
     QList<QString> *templateArguments;
@@ -75,7 +91,7 @@ class TagNamespaceInfo
     TagNamespaceInfo() { members.setAutoDelete(TRUE); }
     QString name;
     QString filename;
-    QStrList docAnchors;
+    TagAnchorInfoList docAnchors;
     QList<TagMemberInfo> members;
     QStringList classList;
 };
@@ -87,7 +103,7 @@ class TagPackageInfo
     TagPackageInfo() { members.setAutoDelete(TRUE); }
     QString name;
     QString filename;
-    QStrList docAnchors;
+    TagAnchorInfoList docAnchors;
     QList<TagMemberInfo> members;
     QStringList classList;
 };
@@ -110,7 +126,7 @@ class TagFileInfo
     QString name;
     QString path;
     QString filename;
-    QStrList docAnchors;
+    TagAnchorInfoList docAnchors;
     QList<TagMemberInfo> members;
     QStringList classList;
     QStringList namespaceList;
@@ -125,7 +141,7 @@ class TagGroupInfo
     QString name;
     QString title;
     QString filename;
-    QStrList docAnchors;
+    TagAnchorInfoList docAnchors;
     QList<TagMemberInfo> members;
     QStringList subgroupList;
     QStringList classList;
@@ -142,7 +158,7 @@ class TagPageInfo
     QString name;
     QString title;
     QString filename;
-    QStrList docAnchors;
+    TagAnchorInfoList docAnchors;
 };
 
 /*! Container for directory specific info that can be read from a tagfile */
@@ -154,7 +170,7 @@ class TagDirInfo
     QString path;
     QStringList subdirList;
     QStringList fileList;
-    QStrList docAnchors;
+    TagAnchorInfoList docAnchors;
 };
 
 /*! Tag file parser. 
@@ -317,8 +333,8 @@ class TagFileParser : public QXmlDefaultHandler
     {
       m_curMember = new TagMemberInfo;
       m_curMember->kind = attrib.value("kind");
-      QString protStr = attrib.value("protection");
-      QString virtStr = attrib.value("virtualness");
+      QString protStr   = attrib.value("protection");
+      QString virtStr   = attrib.value("virtualness");
       QString staticStr = attrib.value("static");
       if (protStr=="protected")
       {
@@ -364,14 +380,14 @@ class TagFileParser : public QXmlDefaultHandler
     {
       switch(m_state)
       {
-        case InClass:     m_curClass->docAnchors.append(m_curString); break;
-        case InFile:      m_curFile->docAnchors.append(m_curString); break;
-        case InNamespace: m_curNamespace->docAnchors.append(m_curString); break;
-        case InGroup:     m_curGroup->docAnchors.append(m_curString); break;
-        case InPage:      m_curPage->docAnchors.append(m_curString); break;
-        case InMember:    m_curMember->docAnchors.append(m_curString); break;
-        case InPackage:   m_curPackage->docAnchors.append(m_curString); break;
-        case InDir:       m_curDir->docAnchors.append(m_curString); break;
+        case InClass:     m_curClass->docAnchors.append(new TagAnchorInfo(m_fileName,m_curString)); break;
+        case InFile:      m_curFile->docAnchors.append(new TagAnchorInfo(m_fileName,m_curString)); break;
+        case InNamespace: m_curNamespace->docAnchors.append(new TagAnchorInfo(m_fileName,m_curString)); break;
+        case InGroup:     m_curGroup->docAnchors.append(new TagAnchorInfo(m_fileName,m_curString)); break;
+        case InPage:      m_curPage->docAnchors.append(new TagAnchorInfo(m_fileName,m_curString)); break;
+        case InMember:    m_curMember->docAnchors.append(new TagAnchorInfo(m_fileName,m_curString)); break;
+        case InPackage:   m_curPackage->docAnchors.append(new TagAnchorInfo(m_fileName,m_curString)); break;
+        case InDir:       m_curDir->docAnchors.append(new TagAnchorInfo(m_fileName,m_curString)); break;
         default:   err("Error: Unexpected tag `member' found\n"); break; 
       }
     }
@@ -424,6 +440,11 @@ class TagFileParser : public QXmlDefaultHandler
     {
       m_curString = "";
     }
+    void startDocAnchor(const QXmlAttributes& attrib )
+    {
+      m_fileName = attrib.value("file");
+      m_curString = "";
+    }
     void endType()
     {
       if (m_state==InMember)
@@ -640,7 +661,7 @@ class TagFileParser : public QXmlDefaultHandler
       m_startElementHandlers.insert("file",        new StartElementHandler(this,&TagFileParser::startStringValue));
       m_startElementHandlers.insert("dir",         new StartElementHandler(this,&TagFileParser::startStringValue));
       m_startElementHandlers.insert("page",        new StartElementHandler(this,&TagFileParser::startStringValue));
-      m_startElementHandlers.insert("docanchor",   new StartElementHandler(this,&TagFileParser::startStringValue));
+      m_startElementHandlers.insert("docanchor",   new StartElementHandler(this,&TagFileParser::startDocAnchor));
       m_startElementHandlers.insert("tagfile",     new StartElementHandler(this,&TagFileParser::startIgnoreElement));
       m_startElementHandlers.insert("templarg",    new StartElementHandler(this,&TagFileParser::startStringValue));
       m_startElementHandlers.insert("type",        new StartElementHandler(this,&TagFileParser::startStringValue));
@@ -708,7 +729,7 @@ class TagFileParser : public QXmlDefaultHandler
     
   private:
     void buildMemberList(Entry *ce,QList<TagMemberInfo> &members);
-    void addDocAnchors(Entry *e,QStrList &l);
+    void addDocAnchors(Entry *e,const TagAnchorInfoList &l);
     QList<TagClassInfo>        m_tagFileClasses;
     QList<TagFileInfo>         m_tagFileFiles;
     QList<TagNamespaceInfo>    m_tagFileNamespaces;
@@ -729,6 +750,7 @@ class TagFileParser : public QXmlDefaultHandler
     TagIncludeInfo            *m_curIncludes;
     QCString                   m_curString;
     QString                    m_tagName;
+    QString                    m_fileName;
     State                      m_state;
     QStack<State>              m_stateStack;
 };
@@ -932,24 +954,25 @@ void TagFileParser::dump()
   }
 }
 
-void TagFileParser::addDocAnchors(Entry *e,QStrList &l)
+void TagFileParser::addDocAnchors(Entry *e,const TagAnchorInfoList &l)
 {
-  char *s=l.first();
-  while (s)
+  QListIterator<TagAnchorInfo> tli(l);
+  TagAnchorInfo *ta;
+  for (tli.toFirst();(ta=tli.current());++tli)
   {
-    QCString *anchorName = new QCString(s);
-    if (Doxygen::sectionDict.find(*anchorName)==0)
+    if (Doxygen::sectionDict.find(ta->label)==0)
     {
-      SectionInfo *si=new SectionInfo(e->fileName,*anchorName,*anchorName,
+      //printf("New sectionInfo file=%s anchor=%s\n",
+      //    ta->fileName.data(),ta->label.data());
+      SectionInfo *si=new SectionInfo(ta->fileName,ta->label,ta->label,
           SectionInfo::Anchor,m_tagName);
-      Doxygen::sectionDict.insert(*anchorName,si);
+      Doxygen::sectionDict.insert(ta->label,si);
       e->anchors->append(si);
     }
     else
     {
-      err("Duplicate anchor %s found\n",anchorName->data());
+      err("Duplicate anchor %s found\n",ta->label.data());
     }
-    s=l.next();
   }
 }
 
diff --git a/src/util.cpp b/src/util.cpp
index fba7edb..10d3ea2 100644
--- a/src/util.cpp
+++ b/src/util.cpp
@@ -128,23 +128,31 @@ int iSystem(const char *command,const char *args,bool isBatchFile)
 {
   QTime time;
   time.start();
+
+  if (command==0) return 1;
+
+  QCString fullCmd=command;
+  fullCmd=fullCmd.stripWhiteSpace();
+  if (fullCmd.at(0)!='"' && fullCmd.find(' ')!=-1)
+  {
+    // add quotes around command as it contains spaces and is not quoted already
+    fullCmd="\""+fullCmd+"\"";
+  }
+  fullCmd += " ";
+  fullCmd += args;
+  //printf("iSystem: Executing %s\n",fullCmd.data());
+
 #if !defined(_WIN32) || defined(__CYGWIN__)
   isBatchFile=isBatchFile;
   /*! taken from the system() manpage on my Linux box */
   int pid,status=0;
 
-  if (command==0) return 1;
 
 #ifdef _OS_SOLARIS // for Solaris we use vfork since it is more memory efficient
 
   // on Solaris fork() duplicates the memory usage
   // so we use vfork instead
   
-  char buf[4096];
-  strcpy(buf,command);
-  strcat(buf," ");
-  strcat(buf,args);
-  
   // spawn shell
   if ((pid=vfork())<0)
   {
@@ -152,7 +160,7 @@ int iSystem(const char *command,const char *args,bool isBatchFile)
   }
   else if (pid==0)
   {
-     execl("/bin/sh","sh","-c",buf,(char*)0);
+     execl("/bin/sh","sh","-c",fullCmd.data(),(char*)0);
      _exit(127);
   }
   else
@@ -175,14 +183,10 @@ int iSystem(const char *command,const char *args,bool isBatchFile)
   if (pid==-1) return -1;
   if (pid==0)
   {
-    char buf[4096];
-    strcpy(buf,command);
-    strcat(buf," ");
-    strcat(buf,args);
     const char * argv[4];
     argv[0] = "sh";
     argv[1] = "-c";
-    argv[2] = buf;
+    argv[2] = fullCmd.data();
     argv[3] = 0;
     execve("/bin/sh",(char * const *)argv,environ);
     exit(127);
@@ -204,9 +208,6 @@ int iSystem(const char *command,const char *args,bool isBatchFile)
 #else // Win32 specific
   if (isBatchFile)
   {
-    QCString fullCmd = command;
-    fullCmd += " ";
-    fullCmd += args;
     return system(fullCmd);
   }
   else
@@ -1107,7 +1108,7 @@ ClassDef *getResolvedClassRec(Definition *scope,
             bestTemplSpec.resize(0);
           }
           else if (distance==minDistance &&
-                   fileScope && 
+                   fileScope && bestMatch &&
                    fileScope->getUsedNamespaces() && 
                    d->getOuterScope()->definitionType()==Definition::TypeNamespace && 
                    bestMatch->getOuterScope()==Doxygen::globalScope
@@ -1143,10 +1144,14 @@ ClassDef *getResolvedClassRec(Definition *scope,
             {
               QCString spec;
               minDistance=distance;
-              bestMatch = newResolveTypedef(fileScope,md,&spec);
-              //printf("      bestTypeDef=%p spec=%s\n",md,spec.data());
-              bestTypedef = md;
-              bestTemplSpec = spec;
+              ClassDef *cd = newResolveTypedef(fileScope,md,&spec);
+              if (cd) // shouldn't be 0, but could in some weird cases
+              {
+                //printf("      bestTypeDef=%p spec=%s\n",md,spec.data());
+                bestMatch = cd;
+                bestTypedef = md;
+                bestTemplSpec = spec;
+              }
             }
           }
         }
diff --git a/wintools/Doxygen.dsp b/wintools/Doxygen.dsp
index f401208..96b6f50 100644
--- a/wintools/Doxygen.dsp
+++ b/wintools/Doxygen.dsp
@@ -23,6 +23,8 @@ CFG=Doxygen - Win32 Debug
 
 # Begin Project
 # PROP AllowPerConfigDependencies 0
+# PROP Scc_ProjName ""
+# PROP Scc_LocalPath ""
 CPP=cl.exe
 RSC=rc.exe
 
@@ -151,6 +153,10 @@ SOURCE=..\src\diagram.cpp
 # End Source File
 # Begin Source File
 
+SOURCE=..\src\dirdef.cpp
+# End Source File
+# Begin Source File
+
 SOURCE=..\src\docparser.cpp
 # End Source File
 # Begin Source File
@@ -415,6 +421,10 @@ SOURCE=..\src\diagram.h
 # End Source File
 # Begin Source File
 
+SOURCE=..\src\dirdef.h
+# End Source File
+# Begin Source File
+
 SOURCE=..\src\docparser.h
 # End Source File
 # Begin Source File