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author | Ruben Vorderman <r.h.p.vorderman@lumc.nl> | 2021-09-02 15:02:59 (GMT) |
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committer | GitHub <noreply@github.com> | 2021-09-02 15:02:59 (GMT) |
commit | ea23e7820f02840368569db8082bd0ca4d59b62a (patch) | |
tree | 44dcdd66cf7335a31a837d7e84a857e5c677e2b3 | |
parent | a7ef15aae8608560bffeeaba412c10e52cab07dd (diff) | |
download | cpython-ea23e7820f02840368569db8082bd0ca4d59b62a.zip cpython-ea23e7820f02840368569db8082bd0ca4d59b62a.tar.gz cpython-ea23e7820f02840368569db8082bd0ca4d59b62a.tar.bz2 |
bpo-43613: Faster implementation of gzip.compress and gzip.decompress (GH-27941)
Co-authored-by: Łukasz Langa <lukasz@langa.pl>
-rw-r--r-- | Doc/library/gzip.rst | 17 | ||||
-rw-r--r-- | Doc/library/zlib.rst | 46 | ||||
-rw-r--r-- | Lib/gzip.py | 161 | ||||
-rw-r--r-- | Lib/test/test_zlib.py | 7 | ||||
-rw-r--r-- | Misc/NEWS.d/next/Library/2021-03-24-09-40-02.bpo-43612.vMGZ4y.rst | 5 | ||||
-rw-r--r-- | Misc/NEWS.d/next/Library/2021-08-25-10-28-49.bpo-43613.WkYmI0.rst | 3 | ||||
-rw-r--r-- | Modules/clinic/zlibmodule.c.h | 32 | ||||
-rw-r--r-- | Modules/zlibmodule.c | 9 |
8 files changed, 193 insertions, 87 deletions
diff --git a/Doc/library/gzip.rst b/Doc/library/gzip.rst index 33c4067..8cea264 100644 --- a/Doc/library/gzip.rst +++ b/Doc/library/gzip.rst @@ -174,19 +174,30 @@ The module defines the following items: Compress the *data*, returning a :class:`bytes` object containing the compressed data. *compresslevel* and *mtime* have the same meaning as in - the :class:`GzipFile` constructor above. + the :class:`GzipFile` constructor above. When *mtime* is set to ``0``, this + function is equivalent to :func:`zlib.compress` with *wbits* set to ``31``. + The zlib function is faster. .. versionadded:: 3.2 .. versionchanged:: 3.8 Added the *mtime* parameter for reproducible output. + .. versionchanged:: 3.11 + Speed is improved by compressing all data at once instead of in a + streamed fashion. Calls with *mtime* set to ``0`` are delegated to + :func:`zlib.compress` for better speed. .. function:: decompress(data) Decompress the *data*, returning a :class:`bytes` object containing the - uncompressed data. + uncompressed data. This function is capable of decompressing multi-member + gzip data (multiple gzip blocks concatenated together). When the data is + certain to contain only one member the :func:`zlib.decompress` function with + *wbits* set to 31 is faster. .. versionadded:: 3.2 - + .. versionchanged:: 3.11 + Speed is improved by decompressing members at once in memory instead of in + a streamed fashion. .. _gzip-usage-examples: diff --git a/Doc/library/zlib.rst b/Doc/library/zlib.rst index ec60ea2..793c90f 100644 --- a/Doc/library/zlib.rst +++ b/Doc/library/zlib.rst @@ -47,7 +47,7 @@ The available exception and functions in this module are: platforms, use ``adler32(data) & 0xffffffff``. -.. function:: compress(data, /, level=-1) +.. function:: compress(data, /, level=-1, wbits=MAX_WBITS) Compresses the bytes in *data*, returning a bytes object containing compressed data. *level* is an integer from ``0`` to ``9`` or ``-1`` controlling the level of compression; @@ -55,11 +55,35 @@ The available exception and functions in this module are: is slowest and produces the most. ``0`` (Z_NO_COMPRESSION) is no compression. The default value is ``-1`` (Z_DEFAULT_COMPRESSION). Z_DEFAULT_COMPRESSION represents a default compromise between speed and compression (currently equivalent to level 6). + + .. _compress-wbits: + + The *wbits* argument controls the size of the history buffer (or the + "window size") used when compressing data, and whether a header and + trailer is included in the output. It can take several ranges of values, + defaulting to ``15`` (MAX_WBITS): + + * +9 to +15: The base-two logarithm of the window size, which + therefore ranges between 512 and 32768. Larger values produce + better compression at the expense of greater memory usage. The + resulting output will include a zlib-specific header and trailer. + + * −9 to −15: Uses the absolute value of *wbits* as the + window size logarithm, while producing a raw output stream with no + header or trailing checksum. + + * +25 to +31 = 16 + (9 to 15): Uses the low 4 bits of the value as the + window size logarithm, while including a basic :program:`gzip` header + and trailing checksum in the output. + Raises the :exc:`error` exception if any error occurs. .. versionchanged:: 3.6 *level* can now be used as a keyword parameter. + .. versionchanged:: 3.11 + The *wbits* parameter is now available to set window bits and + compression type. .. function:: compressobj(level=-1, method=DEFLATED, wbits=MAX_WBITS, memLevel=DEF_MEM_LEVEL, strategy=Z_DEFAULT_STRATEGY[, zdict]) @@ -76,23 +100,9 @@ The available exception and functions in this module are: *method* is the compression algorithm. Currently, the only supported value is :const:`DEFLATED`. - The *wbits* argument controls the size of the history buffer (or the - "window size") used when compressing data, and whether a header and - trailer is included in the output. It can take several ranges of values, - defaulting to ``15`` (MAX_WBITS): - - * +9 to +15: The base-two logarithm of the window size, which - therefore ranges between 512 and 32768. Larger values produce - better compression at the expense of greater memory usage. The - resulting output will include a zlib-specific header and trailer. - - * −9 to −15: Uses the absolute value of *wbits* as the - window size logarithm, while producing a raw output stream with no - header or trailing checksum. - - * +25 to +31 = 16 + (9 to 15): Uses the low 4 bits of the value as the - window size logarithm, while including a basic :program:`gzip` header - and trailing checksum in the output. + The *wbits* parameter controls the size of the history buffer (or the + "window size"), and what header and trailer format will be used. It has + the same meaning as `described for compress() <#compress-wbits>`__. The *memLevel* argument controls the amount of memory used for the internal compression state. Valid values range from ``1`` to ``9``. diff --git a/Lib/gzip.py b/Lib/gzip.py index 3d837b7..0dddb51 100644 --- a/Lib/gzip.py +++ b/Lib/gzip.py @@ -403,6 +403,59 @@ class GzipFile(_compression.BaseStream): return self._buffer.__iter__() +def _read_exact(fp, n): + '''Read exactly *n* bytes from `fp` + + This method is required because fp may be unbuffered, + i.e. return short reads. + ''' + data = fp.read(n) + while len(data) < n: + b = fp.read(n - len(data)) + if not b: + raise EOFError("Compressed file ended before the " + "end-of-stream marker was reached") + data += b + return data + + +def _read_gzip_header(fp): + '''Read a gzip header from `fp` and progress to the end of the header. + + Returns last mtime if header was present or None otherwise. + ''' + magic = fp.read(2) + if magic == b'': + return None + + if magic != b'\037\213': + raise BadGzipFile('Not a gzipped file (%r)' % magic) + + (method, flag, last_mtime) = struct.unpack("<BBIxx", _read_exact(fp, 8)) + if method != 8: + raise BadGzipFile('Unknown compression method') + + if flag & FEXTRA: + # Read & discard the extra field, if present + extra_len, = struct.unpack("<H", _read_exact(fp, 2)) + _read_exact(fp, extra_len) + if flag & FNAME: + # Read and discard a null-terminated string containing the filename + while True: + s = fp.read(1) + if not s or s==b'\000': + break + if flag & FCOMMENT: + # Read and discard a null-terminated string containing a comment + while True: + s = fp.read(1) + if not s or s==b'\000': + break + if flag & FHCRC: + _read_exact(fp, 2) # Read & discard the 16-bit header CRC + return last_mtime + + class _GzipReader(_compression.DecompressReader): def __init__(self, fp): super().__init__(_PaddedFile(fp), zlib.decompressobj, @@ -415,53 +468,11 @@ class _GzipReader(_compression.DecompressReader): self._crc = zlib.crc32(b"") self._stream_size = 0 # Decompressed size of unconcatenated stream - def _read_exact(self, n): - '''Read exactly *n* bytes from `self._fp` - - This method is required because self._fp may be unbuffered, - i.e. return short reads. - ''' - - data = self._fp.read(n) - while len(data) < n: - b = self._fp.read(n - len(data)) - if not b: - raise EOFError("Compressed file ended before the " - "end-of-stream marker was reached") - data += b - return data - def _read_gzip_header(self): - magic = self._fp.read(2) - if magic == b'': + last_mtime = _read_gzip_header(self._fp) + if last_mtime is None: return False - - if magic != b'\037\213': - raise BadGzipFile('Not a gzipped file (%r)' % magic) - - (method, flag, - self._last_mtime) = struct.unpack("<BBIxx", self._read_exact(8)) - if method != 8: - raise BadGzipFile('Unknown compression method') - - if flag & FEXTRA: - # Read & discard the extra field, if present - extra_len, = struct.unpack("<H", self._read_exact(2)) - self._read_exact(extra_len) - if flag & FNAME: - # Read and discard a null-terminated string containing the filename - while True: - s = self._fp.read(1) - if not s or s==b'\000': - break - if flag & FCOMMENT: - # Read and discard a null-terminated string containing a comment - while True: - s = self._fp.read(1) - if not s or s==b'\000': - break - if flag & FHCRC: - self._read_exact(2) # Read & discard the 16-bit header CRC + self._last_mtime = last_mtime return True def read(self, size=-1): @@ -524,7 +535,7 @@ class _GzipReader(_compression.DecompressReader): # We check that the computed CRC and size of the # uncompressed data matches the stored values. Note that the size # stored is the true file size mod 2**32. - crc32, isize = struct.unpack("<II", self._read_exact(8)) + crc32, isize = struct.unpack("<II", _read_exact(self._fp, 8)) if crc32 != self._crc: raise BadGzipFile("CRC check failed %s != %s" % (hex(crc32), hex(self._crc))) @@ -544,21 +555,65 @@ class _GzipReader(_compression.DecompressReader): super()._rewind() self._new_member = True + +def _create_simple_gzip_header(compresslevel: int, + mtime = None) -> bytes: + """ + Write a simple gzip header with no extra fields. + :param compresslevel: Compresslevel used to determine the xfl bytes. + :param mtime: The mtime (must support conversion to a 32-bit integer). + :return: A bytes object representing the gzip header. + """ + if mtime is None: + mtime = time.time() + if compresslevel == _COMPRESS_LEVEL_BEST: + xfl = 2 + elif compresslevel == _COMPRESS_LEVEL_FAST: + xfl = 4 + else: + xfl = 0 + # Pack ID1 and ID2 magic bytes, method (8=deflate), header flags (no extra + # fields added to header), mtime, xfl and os (255 for unknown OS). + return struct.pack("<BBBBLBB", 0x1f, 0x8b, 8, 0, int(mtime), xfl, 255) + + def compress(data, compresslevel=_COMPRESS_LEVEL_BEST, *, mtime=None): """Compress data in one shot and return the compressed string. - Optional argument is the compression level, in range of 0-9. + + compresslevel sets the compression level in range of 0-9. + mtime can be used to set the modification time. The modification time is + set to the current time by default. """ - buf = io.BytesIO() - with GzipFile(fileobj=buf, mode='wb', compresslevel=compresslevel, mtime=mtime) as f: - f.write(data) - return buf.getvalue() + if mtime == 0: + # Use zlib as it creates the header with 0 mtime by default. + # This is faster and with less overhead. + return zlib.compress(data, level=compresslevel, wbits=31) + header = _create_simple_gzip_header(compresslevel, mtime) + trailer = struct.pack("<LL", zlib.crc32(data), (len(data) & 0xffffffff)) + # Wbits=-15 creates a raw deflate block. + return header + zlib.compress(data, wbits=-15) + trailer + def decompress(data): """Decompress a gzip compressed string in one shot. Return the decompressed string. """ - with GzipFile(fileobj=io.BytesIO(data)) as f: - return f.read() + decompressed_members = [] + while True: + fp = io.BytesIO(data) + if _read_gzip_header(fp) is None: + return b"".join(decompressed_members) + # Use a zlib raw deflate compressor + do = zlib.decompressobj(wbits=-zlib.MAX_WBITS) + # Read all the data except the header + decompressed = do.decompress(data[fp.tell():]) + crc, length = struct.unpack("<II", do.unused_data[:8]) + if crc != zlib.crc32(decompressed): + raise BadGzipFile("CRC check failed") + if length != (len(decompressed) & 0xffffffff): + raise BadGzipFile("Incorrect length of data produced") + decompressed_members.append(decompressed) + data = do.unused_data[8:].lstrip(b"\x00") def main(): diff --git a/Lib/test/test_zlib.py b/Lib/test/test_zlib.py index cb06108..04fb4d9 100644 --- a/Lib/test/test_zlib.py +++ b/Lib/test/test_zlib.py @@ -831,6 +831,13 @@ class CompressObjectTestCase(BaseCompressTestCase, unittest.TestCase): dco = zlib.decompressobj(32 + 15) self.assertEqual(dco.decompress(gzip), HAMLET_SCENE) + for wbits in (-15, 15, 31): + with self.subTest(wbits=wbits): + expected = HAMLET_SCENE + actual = zlib.decompress( + zlib.compress(HAMLET_SCENE, wbits=wbits), wbits=wbits + ) + self.assertEqual(expected, actual) def choose_lines(source, number, seed=None, generator=random): """Return a list of number lines randomly chosen from the source""" diff --git a/Misc/NEWS.d/next/Library/2021-03-24-09-40-02.bpo-43612.vMGZ4y.rst b/Misc/NEWS.d/next/Library/2021-03-24-09-40-02.bpo-43612.vMGZ4y.rst new file mode 100644 index 0000000..e6fc88f --- /dev/null +++ b/Misc/NEWS.d/next/Library/2021-03-24-09-40-02.bpo-43612.vMGZ4y.rst @@ -0,0 +1,5 @@ +:func:`zlib.compress` now accepts a wbits parameter which allows users to +compress data as a raw deflate block without zlib headers and trailers in +one go. Previously this required instantiating a ``zlib.compressobj``. It +also provides a faster alternative to ``gzip.compress`` when wbits=31 is +used. diff --git a/Misc/NEWS.d/next/Library/2021-08-25-10-28-49.bpo-43613.WkYmI0.rst b/Misc/NEWS.d/next/Library/2021-08-25-10-28-49.bpo-43613.WkYmI0.rst new file mode 100644 index 0000000..d6af35c --- /dev/null +++ b/Misc/NEWS.d/next/Library/2021-08-25-10-28-49.bpo-43613.WkYmI0.rst @@ -0,0 +1,3 @@ +Improve the speed of :func:`gzip.compress` and :func:`gzip.decompress` by +compressing and decompressing at once in memory instead of in a streamed +fashion. diff --git a/Modules/clinic/zlibmodule.c.h b/Modules/clinic/zlibmodule.c.h index 14e955d..e2a5fcc 100644 --- a/Modules/clinic/zlibmodule.c.h +++ b/Modules/clinic/zlibmodule.c.h @@ -3,7 +3,7 @@ preserve [clinic start generated code]*/ PyDoc_STRVAR(zlib_compress__doc__, -"compress($module, data, /, level=Z_DEFAULT_COMPRESSION)\n" +"compress($module, data, /, level=Z_DEFAULT_COMPRESSION, wbits=MAX_WBITS)\n" "--\n" "\n" "Returns a bytes object containing compressed data.\n" @@ -11,26 +11,29 @@ PyDoc_STRVAR(zlib_compress__doc__, " data\n" " Binary data to be compressed.\n" " level\n" -" Compression level, in 0-9 or -1."); +" Compression level, in 0-9 or -1.\n" +" wbits\n" +" The window buffer size and container format."); #define ZLIB_COMPRESS_METHODDEF \ {"compress", (PyCFunction)(void(*)(void))zlib_compress, METH_FASTCALL|METH_KEYWORDS, zlib_compress__doc__}, static PyObject * -zlib_compress_impl(PyObject *module, Py_buffer *data, int level); +zlib_compress_impl(PyObject *module, Py_buffer *data, int level, int wbits); static PyObject * zlib_compress(PyObject *module, PyObject *const *args, Py_ssize_t nargs, PyObject *kwnames) { PyObject *return_value = NULL; - static const char * const _keywords[] = {"", "level", NULL}; + static const char * const _keywords[] = {"", "level", "wbits", NULL}; static _PyArg_Parser _parser = {NULL, _keywords, "compress", 0}; - PyObject *argsbuf[2]; + PyObject *argsbuf[3]; Py_ssize_t noptargs = nargs + (kwnames ? PyTuple_GET_SIZE(kwnames) : 0) - 1; Py_buffer data = {NULL, NULL}; int level = Z_DEFAULT_COMPRESSION; + int wbits = MAX_WBITS; - args = _PyArg_UnpackKeywords(args, nargs, NULL, kwnames, &_parser, 1, 2, 0, argsbuf); + args = _PyArg_UnpackKeywords(args, nargs, NULL, kwnames, &_parser, 1, 3, 0, argsbuf); if (!args) { goto exit; } @@ -44,12 +47,21 @@ zlib_compress(PyObject *module, PyObject *const *args, Py_ssize_t nargs, PyObjec if (!noptargs) { goto skip_optional_pos; } - level = _PyLong_AsInt(args[1]); - if (level == -1 && PyErr_Occurred()) { + if (args[1]) { + level = _PyLong_AsInt(args[1]); + if (level == -1 && PyErr_Occurred()) { + goto exit; + } + if (!--noptargs) { + goto skip_optional_pos; + } + } + wbits = _PyLong_AsInt(args[2]); + if (wbits == -1 && PyErr_Occurred()) { goto exit; } skip_optional_pos: - return_value = zlib_compress_impl(module, &data, level); + return_value = zlib_compress_impl(module, &data, level, wbits); exit: /* Cleanup for data */ @@ -803,4 +815,4 @@ exit: #ifndef ZLIB_DECOMPRESS___DEEPCOPY___METHODDEF #define ZLIB_DECOMPRESS___DEEPCOPY___METHODDEF #endif /* !defined(ZLIB_DECOMPRESS___DEEPCOPY___METHODDEF) */ -/*[clinic end generated code: output=6736bae59fab268b input=a9049054013a1b77]*/ +/*[clinic end generated code: output=e3e8a6142ea045a7 input=a9049054013a1b77]*/ diff --git a/Modules/zlibmodule.c b/Modules/zlibmodule.c index 3efb24a..27a6d9a 100644 --- a/Modules/zlibmodule.c +++ b/Modules/zlibmodule.c @@ -310,13 +310,15 @@ zlib.compress / level: int(c_default="Z_DEFAULT_COMPRESSION") = Z_DEFAULT_COMPRESSION Compression level, in 0-9 or -1. + wbits: int(c_default="MAX_WBITS") = MAX_WBITS + The window buffer size and container format. Returns a bytes object containing compressed data. [clinic start generated code]*/ static PyObject * -zlib_compress_impl(PyObject *module, Py_buffer *data, int level) -/*[clinic end generated code: output=d80906d73f6294c8 input=638d54b6315dbed3]*/ +zlib_compress_impl(PyObject *module, Py_buffer *data, int level, int wbits) +/*[clinic end generated code: output=46bd152fadd66df2 input=c4d06ee5782a7e3f]*/ { PyObject *RetVal; int flush; @@ -336,7 +338,8 @@ zlib_compress_impl(PyObject *module, Py_buffer *data, int level) zst.zalloc = PyZlib_Malloc; zst.zfree = PyZlib_Free; zst.next_in = ibuf; - int err = deflateInit(&zst, level); + int err = deflateInit2(&zst, level, DEFLATED, wbits, DEF_MEM_LEVEL, + Z_DEFAULT_STRATEGY); switch (err) { case Z_OK: |