From 1d8fcdaceaeb535dbe9a13797527ff420c42b61b Mon Sep 17 00:00:00 2001 From: Guido van Rossum Date: Mon, 24 Apr 2000 14:17:17 +0000 Subject: Oops -- Mark forgot to add "0x" to the /base: argument. --- PCbuild/mmap.dsp | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/PCbuild/mmap.dsp b/PCbuild/mmap.dsp index 0f518ee..82a14e1 100644 --- a/PCbuild/mmap.dsp +++ b/PCbuild/mmap.dsp @@ -54,7 +54,7 @@ BSC32=bscmake.exe # ADD BSC32 /nologo LINK32=link.exe # ADD BASE LINK32 kernel32.lib user32.lib gdi32.lib winspool.lib comdlg32.lib advapi32.lib shell32.lib ole32.lib oleaut32.lib uuid.lib odbc32.lib odbccp32.lib /nologo /dll /machine:I386 -# ADD LINK32 kernel32.lib user32.lib gdi32.lib winspool.lib comdlg32.lib advapi32.lib shell32.lib ole32.lib oleaut32.lib uuid.lib odbc32.lib odbccp32.lib /nologo /base:"1e1F0000" /dll /machine:I386 /out:"./mmap.pyd" +# ADD LINK32 kernel32.lib user32.lib gdi32.lib winspool.lib comdlg32.lib advapi32.lib shell32.lib ole32.lib oleaut32.lib uuid.lib odbc32.lib odbccp32.lib /nologo /base:"0x1e1F0000" /dll /machine:I386 /out:"./mmap.pyd" !ELSEIF "$(CFG)" == "mmap - Win32 Debug" @@ -81,7 +81,7 @@ BSC32=bscmake.exe # ADD BSC32 /nologo LINK32=link.exe # ADD BASE LINK32 kernel32.lib user32.lib gdi32.lib winspool.lib comdlg32.lib advapi32.lib shell32.lib ole32.lib oleaut32.lib uuid.lib odbc32.lib odbccp32.lib /nologo /dll /debug /machine:I386 /pdbtype:sept -# ADD LINK32 kernel32.lib user32.lib gdi32.lib winspool.lib comdlg32.lib advapi32.lib shell32.lib ole32.lib oleaut32.lib uuid.lib odbc32.lib odbccp32.lib /nologo /base:"1e1F0000" /dll /debug /machine:I386 /out:"./mmap_d.pyd" /pdbtype:sept +# ADD LINK32 kernel32.lib user32.lib gdi32.lib winspool.lib comdlg32.lib advapi32.lib shell32.lib ole32.lib oleaut32.lib uuid.lib odbc32.lib odbccp32.lib /nologo /base:"0x1e1F0000" /dll /debug /machine:I386 /out:"./mmap_d.pyd" /pdbtype:sept !ENDIF -- cgit v0.12 ature/select_io_chunk_cache Mirror from: https://github.com/HDFGroup/hdf5.git
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* 1.8/master (#317)hdf5-1_8_22Larry Knox2021-02-081-932/+834
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * Revert incorrect bool type * Correct grep text for filter test * Check sizeof type to use correct ref_type * h5dump reg ref chnages has no error file * Fix comment * Remove unneeded files * Verify the decoded version for "all" and "none" selection. * Remove double entry * Add missing include * Snapshot version 1.8 release 22 (snap4) Update version to 1.8-snap5 * Fixes for test failures with --disable-tests --disable-tools options. Don't test ph5diff if tests are disabled. * Correct conditions for parallel builds with and without tests. * Snapshot version 1.8 release 22 (snap5) Update version to 1.8.22-snap6 * TRILAB-192 merging warnings changes from develop * Autotools reconfigure update * Restore page ejects. * Restore page eject chars * Fix orphaned token * Update LT files * Correct extra flags and merge TRILAB-24 * Update release note for CMake warnings * H5repack bug fixes from develop * TRILAB-192 - merge changes from develop Single source, config files, for warnings for both autotools and CMake. Update CMake libraries, tools, tests to use correct flags. * Add missing m4 file * Remove 128bit config check fo 1.8 * TRILAB-192 update LTparse files * A fix in the cleaning up code for datatype when datatype initialization via H5D__init_type() fails. The code to fix the problem is the same as what is done in H5D__open_oid(). * Add missing " and update function calls incorrectly named load_gcc_arguments. Commit changes to gnu-cxxflags to remove unmatched " and to gnu-fflags to not add C warnings flags to H5_FCFLAGS. * TRILAB-192 - cleanup edits and match CMake CXX to autotools * Fix shadowed type * TRILAB-192 correct fortran commands * TRILAB-192 version of std=f2008 special check * Fix shadow variable * Add prefix_relto_examplesdir function to set relative path to h5c++. * TRILAB-192 - parser files cannot handle this warning * Parallel Fortran tests now use the MPI module instead of including mpif.h. * Don't add general warnings flags for unsupported old versions of gcc and g++ (older than gcc/g++ 4.2). Correct gnu-cxxflags to determine warnings flags to be added based on C++ compiler version instead of C compiler version. * Snapshot version 1.8 release 22 (snap6) Update version to 1.8.22-snap7 * TRILAB-244 separate CXX warnings and errors from C * Fix NoFilter build * Move ADD_H5_FLAGS macro from *CompilerFlags.cmake files to config/cmake_ext_mod/HDFMacros.cmake for common use. * Restrict errors to gcc 4.8 and above. * OESS-65 replace szip with aec szip * Correct CMake version * Correct -Werror=unused-variable * Add -Werror= flags to lists displayed in libhdf5.settings. * Fix -Werror=unused-variable * More fixes for unused variable * Resolve warning errors from -Werror= flags: -Werror=bad-function-cast -Werror=bad-function-cast -Werror=implicit-function-declaration -Werror=nested-externs * Remove verbose assignments in smoke_check 3 and 5 functions. * Update to use optimization flags, C++ error flags, and correct libhdf5.settings.in to remove unworkable changes. * Update config/gnu-cxxflags. * Add missing headers * Fix ifort warning flag. Restore AC_DEFUN([PAC_PROG_FC_DEFAULT_REALisDBLE] in m4/aclocal_fc.m4. Add --enable-symbols, --enable-profiling, and --enable-optimization options to autotools configure; all configure flags for --enable-production and --disable-production should match HDF5 1.10 and 1.12 production and debug default flags. * Add github actions file * Correct path * OESS-65 Fix packaging * Update reference name * Correct filename * disable pr action and enable fail fast * Snapshot 1.8.22-snap7 Update version to 1.8.22-snap8. * Correct mingw path * Correct mingw paths * Revise gnu-*flags and cmake/HDF*CompilerFlags.cmake files to add warning flags for GCC compilers version 4.8 and above. Removed files from gnu-warnings that only apply to versions < 4.8. Consolidated warnings from versions < 4.8 that apply to versions >= 4.8 into the 4.8 warnings files. * Update MANIFEST for removal of older warnings files. * Yanked all MPI-1 calls Added batch scripts in bin/batch. * Snapshot 1.8.22-snap8. Update version to 1.8.22-snap9. * Squashed commit of the following: commit 45b0cbc71929930a874e1c09e0770aa64d0ae697 Author: Larry Knox <lrknox@hdfgroup.org> Date: Thu Apr 23 13:14:56 2020 -0500 Add C++ warnings treated as error for autotools builds. commit 6debcddcc766601799d5bd661bd60946f951a07e Author: Larry Knox <lrknox@hdfgroup.org> Date: Fri Jun 19 16:50:03 2020 -0500 Remove tests for develop branch from testh5cc.sh.in. Add @H5_ECXXFLAGS@ to AM_CXXFLAGS. commit fed497e7f207313b2a133d3b68c942b7d7104b90 Author: Larry Knox <lrknox@hdfgroup.org> Date: Fri Jun 12 15:06:39 2020 -0500 Merge pull request #2646 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to develop * commit '998c6470d78e14228695419c3b514c35ecf3d69e': Remove unnecessary version conditions for Clang compilers. commit 92e52ce5c211bd1d3991a3b8bb67287ac7b652aa Author: Larry Knox <lrknox@hdfgroup.org> Date: Wed Jun 10 18:53:45 2020 -0500 Merge pull request #2639 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to develop * commit 'a33667faf226f5d8c9633bf537893e8fce1bf1f6': Add c++ to --enable-sanitize-checks option. commit 2e802534fb997b81fa98fdd1c7d97d4310898e0d Author: Larry Knox <lrknox@hdfgroup.org> Date: Wed Jun 10 15:18:36 2020 -0500 Merge pull request #2633 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to develop * commit '20eab963899841c9a003baebead8e3bc07d9e127': Remove duplicate entries in MANIFEST. Make changes to CMake CompilerFlags.cmake files so extra flags are loaded for non-GNU compilers. Update new clang files to not pick up clang as vendor for pgCC. Add new files to MANIFEST Temporary demotion of 2 -Werror warning flags that fail on macos 10.12 Remove Production flag unknown to Apple clang. commit 96ef60a58a23847a7da89a891f2415055ec2ab60 Author: Larry Knox <lrknox@hdfgroup.org> Date: Mon Jun 8 16:24:49 2020 -0500 Merge pull request #2631 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to develop * commit 'b942a4d8a3e27317cac50ce37ff5302d477664d8': Clean up code to get clang version in config/linux-gnulibc1 commit 8a7c687da568e8b50b38fa53da1ca63759be6ec4 Author: Larry Knox <lrknox@hdfgroup.org> Date: Mon Jun 8 11:42:37 2020 -0500 Merge pull request #2623 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to develop * commit 'c7626f79fdee4eee13925e240ef41e61f3367eab': Add flags from config/clang-warnings/*general files to H5 C and CXX flags for all versions of Clang and Clang++ compilers. Switched from cut to awk in testcheck_version.sh.in to avoid dependence on tab vs. " " in version definitions in H5public.h. Add files for adding warning flags for clang compilers in autotools configure. commit db3ef7ff3c1ed79167cecef831501411cff8291f Merge: 5a0f8d7 f9f1310 Author: Larry Knox <lrknox@hdfgroup.org> Date: Fri Jun 19 14:46:22 2020 -0500 Merge branch 'hdf5_1_12' of https://bitbucket.hdfgroup.org/scm/~lrknox/hdf5_lrk into hdf5_1_12 commit 5a0f8d7940ae57b445f545a0abd7e303ce6924ee Author: Larry Knox <lrknox@hdfgroup.org> Date: Wed Jun 10 20:15:41 2020 -0500 Merge pull request #2636 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:HDFFV-11000-update-testh5cc.sh.in-for-version to develop * commit '5c0bd670d6e9919c463fbc05de99e2ba55b0761e': Add tests for all version to H5_NO_DEPRECATED_SYMBOLS section and to section for current version, with and without default API version flags. HDFFV-11000: update-testh5cc.sh.in to test sample versioned functions in HDF5 1.10, 1.12 and develop. * Update configure and Makefile.ins after bin/reconfigure. * Fix MANIFEST * Fix HDFFV-10591 Description: h52gif produced a segfault when a buffer overflow occurred because the data size was corrupted and became very large. This commit added a check on the data size against the buffer size to prevent the segfault. It also added error reporting to h52gif to display an error message instead of silently exiting when the failure occurred. Platforms tested: Linux/64 (jelly) * Snapshot 1.8.22-snap9. Update version to 1.8.22-snap10. * Merge pull request #2686 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to develop * commit '800f93f7c994f88dfa716746153ded4b1e690e3a': Remove path to szip header file from AM_CPPFLAGS when configure check of libsz fails. Fix for HDFFV-10830. * Regenerate configure. * Merge from 1.10-1.12-dev - LT parse needs update * Incorporate pull request #2693 from develop for the fix to HDFFV-11080: (1) Patch up the file pointer when reading attribute of variable length datatype (2) Test to verify the fix when doing multiple threads (3) Update MANIFEST (4) Add new test to Cmake * Switch bison and flex update of LT files from bin/genltanalyse to bin/genparser, and from automatically updating the LT files whenever reconfigure is run to running only on man<F12>ual command. * Update hl/sr/H5LT files. Add bin/genparser to MANIFEST; remove bin/genltanalyze. * Fix to the merge of PR #2708 for HDFFV-11080 to the 1.8 branch. Need to checkin test/Makefile.in for the new file added. * Fix HDFFV-11120 and HDFFV-11121 (CVE-2018-13870 and CVE-2018-13869) Description: When a buffer overflow occurred because a name length was corrupted and became very large, h5dump produced a segfault on one file and a memcpy parameter overlap on another file. This commit added checks that detect a read pass the end of the buffer to prevent these error conditions. Platforms tested: Linux/64 (jelly) * Fixed typo * Check for header szlib.h only when libsz passes AC_CHECK_LIB, so that H5_HAVE_SALIB_H is not defined when szip is not enabled, to prevent compile failures for incompatible szlib. * HDFFV-11127 - force RTLD_LOCAL in dlopen * spelling * Remove extra parens * Remove unnecessary assignment freom configure.ac. * Add hypen to subrelease regex * Add special case when H5_VERS_SUBRELEASE is 0 * Revert H5_VERS_SUBRELEASE check * The version string has a second use for packaging * MinGW uses "MinGW Makefiles" * Snapshot 1.8.22-snap10. Update version to 1.8.22-snap11. * Merge clang-format changes from develop * remove stray file * Source formatted * Add options to github actions. * Add back file, remove py file * HDFFV-11096 Correct h5dump usage text * Update formating * remove autogen for 1.8 branch * Fix comment whitespace * Change '==' to 'eq' in test script * Merge from develop github updates bin scripts parser updates * Snapshot 1.8.22-snap11. Update version to 1.8.22-snap12. * Merge from 1.10 Comments, whitespace Simple init and if block brackets. Minimal code changes limited to return value and spelling * Update autotools files * Update FD source * More merges from 1.10 comments and inits * Comment fixes * Fix macro argument * Remove autogen file and cache dir * Revert autotools files to previous version * Correct boolean value and missing define * URL and options corrections * revert autoconf files * Fix compile issues with vfd drivers. * Fix HDFS test * Remove extra #endif * Move init above execution * Multiple changes to bring branch up-to-date (#87) Correct TARGET variable and CMake config file location. Add option to allow filter plugins to be built inline. Update CMake tools macros. * hdf5 1 8 release text (#113) * Multiple changes to bring branch up-to-date Correct TARGET variable and CMake config file location. Add option to allow filter plugins to be built inline. Update CMake tools macros. * release text updates - mostly whitespace * Fixed HDFFV-10480 and HDFFV-11159 (#145) * Fixed HDFFV-10480 and HDFFV-11159 Description Checked against buffer size to prevent segfault, in case of data corruption. + HDFFV-11159 CVE-2018-14033 Buffer over-read in H5O_layout_decode + HDFFV-10480 CVE-2018-11206 Buffer over-read in H5O_fill_new[/old]_decode and A user's patch was applied to this previously, but it is redone for a more correct fix, that is the check now accounted for the previous advance of the buffer pointer. Platforms tested: Linux/64 (jelly) * Fixed typo * Update HDF5 1.8 copyright headers with updated copyright URL (#148) * Update URL for COPYING file in copyright headers. * Make fortran copyright headers uniformly spaced. * Update url for Copyright file in c++/src/footer.html. * OESS-98 Update plugin build option (#171) * 1.8 has extra fortran CMake option (#176) * 1.8 has extra fortran CMake option * Update license URL * OESS-98 fix tools test for plugins (#180) * Hdf5 1 8 (#169) * Fixed HDFFV-10480 and HDFFV-11159 Description Checked against buffer size to prevent segfault, in case of data corruption. + HDFFV-11159 CVE-2018-14033 Buffer over-read in H5O_layout_decode + HDFFV-10480 CVE-2018-11206 Buffer over-read in H5O_fill_new[/old]_decode and A user's patch was applied to this previously, but it is redone for a more correct fix, that is the check now accounted for the previous advance of the buffer pointer. Platforms tested: Linux/64 (jelly) * Fixed typo * Fixed HDFFV-11150 Description Replaced an HDassert with a check for null pointer in H5O_dec_rc() to catch null pointer in corrupted data situation. Reversed the fix in svn-r24463 in which a check for null pointer prior to calling H5O_dec_rc() Platforms tested: Linux/64 (jelly) * HDF5 1 8 fix fortran build on macs (#186) * Correct fortran and shared libs option * Fix for no shared fortran build * OESS-98 fix hdf5 link target (#191) * Partial changes to RELEASE.txt for release. (#185) * Partial changes to RELEASE.txt for release. * Update supported and tested platforms. * Update version to 1.8.22-12. * close #195. (#196) * Update HDF5PluginMacros.cmake * Update HDF5PluginMacros.cmake * Update directory for SZ filter in HDF5PluginMacros.cmake. Updates for release: Switch configure default to production mode. Set HDF5_GENERATE_HEADERS to OFF. * Restores maintainer mode in the autotools (#200) Maintainer mode should be enabled in development branches. Also adds helpful commenting. Add bin/switch_maint_mode Disable maintainer mode for release. Fix incomplete merge for stub functions in H5Fdhdfs.c * Update configure for Restores maintainer mode in the autotools (#200). * Update MANIFEST for switch_maint_mode script. * Restores maintainer mode in the autotools (#200) (#203) * Restores maintainer mode in the autotools (#200) Maintainer mode should be enabled in development branches. Also adds helpful commenting. Add bin/switch_maint_mode Disable maintainer mode for release. Fix incomplete merge for stub functions in H5Fdhdfs.c * Update configure for Restores maintainer mode in the autotools (#200). * Update MANIFEST for switch_maint_mode script. Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com> * Hdf5 1 8 22 (#212) * Restores maintainer mode in the autotools (#200) Maintainer mode should be enabled in development branches. Also adds helpful commenting. Add bin/switch_maint_mode Disable maintainer mode for release. Fix incomplete merge for stub functions in H5Fdhdfs.c * Update configure for Restores maintainer mode in the autotools (#200). * Update MANIFEST for switch_maint_mode script. Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com> * Update so numbers for 1.8.22 release. * Add so numbers changes in Makefile.ins for 1.8.22 release. * Brings ttsafe_attr_vlen.c changes from develop (#214) Fixes exposed pthread problem on Windows. * Update SO numbers for Hdf5 1 8 22 (#215) * Restores maintainer mode in the autotools (#200) Maintainer mode should be enabled in development branches. Also adds helpful commenting. Add bin/switch_maint_mode Disable maintainer mode for release. Fix incomplete merge for stub functions in H5Fdhdfs.c * Update configure for Restores maintainer mode in the autotools (#200). * Update MANIFEST for switch_maint_mode script. * Update so numbers for 1.8.22 release. * Add so numbers changes in Makefile.ins for 1.8.22 release. Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com> * Update pkgconfig settings with version - #218 (#223) * Add notice of final HDFF5 1.8 release. Add solaris 64bit alignment issue to "Known Problems". * Update 1.8 final release notice. * Hdf5 1 8 22 (#224) * Restores maintainer mode in the autotools (#200) Maintainer mode should be enabled in development branches. Also adds helpful commenting. Add bin/switch_maint_mode Disable maintainer mode for release. Fix incomplete merge for stub functions in H5Fdhdfs.c * Update configure for Restores maintainer mode in the autotools (#200). * Update MANIFEST for switch_maint_mode script. * Update so numbers for 1.8.22 release. * Add so numbers changes in Makefile.ins for 1.8.22 release. * Update pkgconfig settings with version - #218 (#223) * Add notice of final HDFF5 1.8 release. Add solaris 64bit alignment issue to "Known Problems". * Update 1.8 final release notice. Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com> Co-authored-by: Allen Byrne <50328838+byrnHDF@users.noreply.github.com> * Update CMake/HDF5Examples version in bin/release * Update CMake/HDF5Examples version number in bin/release (#225) * Restores maintainer mode in the autotools (#200) Maintainer mode should be enabled in development branches. Also adds helpful commenting. Add bin/switch_maint_mode Disable maintainer mode for release. Fix incomplete merge for stub functions in H5Fdhdfs.c * Update configure for Restores maintainer mode in the autotools (#200). * Update MANIFEST for switch_maint_mode script. * Update so numbers for 1.8.22 release. * Add so numbers changes in Makefile.ins for 1.8.22 release. * Update pkgconfig settings with version - #218 (#223) * Add notice of final HDFF5 1.8 release. Add solaris 64bit alignment issue to "Known Problems". * Update 1.8 final release notice. * Update CMake/HDF5Examples version in bin/release Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com> Co-authored-by: Allen Byrne <50328838+byrnHDF@users.noreply.github.com> * Fixed typo in an error message. (#228) * Fixed typo in an error message. (#227) * Remove duplicate setting (#239) * Bring 3 small changes from Hdf5 1.8 to 1.8.22 (#241) * Restores maintainer mode in the autotools (#200) Maintainer mode should be enabled in development branches. Also adds helpful commenting. Add bin/switch_maint_mode Disable maintainer mode for release. Fix incomplete merge for stub functions in H5Fdhdfs.c * Update configure for Restores maintainer mode in the autotools (#200). * Update MANIFEST for switch_maint_mode script. * Update so numbers for 1.8.22 release. * Add so numbers changes in Makefile.ins for 1.8.22 release. * Update pkgconfig settings with version - #218 (#223) * Add notice of final HDFF5 1.8 release. Add solaris 64bit alignment issue to "Known Problems". * Update 1.8 final release notice. * Update CMake/HDF5Examples version in bin/release * Fixed typo in an error message. (#227) * Remove duplicate setting (#239) Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com> Co-authored-by: Allen Byrne <50328838+byrnHDF@users.noreply.github.com> Co-authored-by: bmribler <39579120+bmribler@users.noreply.github.com> * Stat st blocks fix 1822 (#251) * Restores maintainer mode in the autotools (#200) Maintainer mode should be enabled in development branches. Also adds helpful commenting. Add bin/switch_maint_mode Disable maintainer mode for release. Fix incomplete merge for stub functions in H5Fdhdfs.c * Update configure for Restores maintainer mode in the autotools (#200). * Update MANIFEST for switch_maint_mode script. * Update so numbers for 1.8.22 release. * Add so numbers changes in Makefile.ins for 1.8.22 release. * Update pkgconfig settings with version - #218 (#223) * Add notice of final HDFF5 1.8 release. Add solaris 64bit alignment issue to "Known Problems". * Update 1.8 final release notice. * Update CMake/HDF5Examples version in bin/release * Fixed typo in an error message. (#227) * Remove duplicate setting (#239) * Fixes Autotools detection of the st_blocks field in stat (#246) * Fixes Autotools detection of the st_blocks field in stat The Autotools and CMake will now both correctly determine if the stat struct has the st_blocks field and set H5_HAVE_STAT_ST_BLOCKS appropriately. * Fixes a typo in configure.ac * Restore lines in RELEASE.txt. Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com> Co-authored-by: Allen Byrne <50328838+byrnHDF@users.noreply.github.com> Co-authored-by: bmribler <39579120+bmribler@users.noreply.github.com> * Stat st blocks fix 1822 (#256) * Restores maintainer mode in the autotools (#200) Maintainer mode should be enabled in development branches. Also adds helpful commenting. Add bin/switch_maint_mode Disable maintainer mode for release. Fix incomplete merge for stub functions in H5Fdhdfs.c * Update configure for Restores maintainer mode in the autotools (#200). * Update MANIFEST for switch_maint_mode script. * Update so numbers for 1.8.22 release. * Add so numbers changes in Makefile.ins for 1.8.22 release. * Update pkgconfig settings with version - #218 (#223) * Add notice of final HDFF5 1.8 release. Add solaris 64bit alignment issue to "Known Problems". * Update 1.8 final release notice. * Update CMake/HDF5Examples version in bin/release * Fixed typo in an error message. (#227) * Remove duplicate setting (#239) * Fixes Autotools detection of the st_blocks field in stat (#246) * Fixes Autotools detection of the st_blocks field in stat The Autotools and CMake will now both correctly determine if the stat struct has the st_blocks field and set H5_HAVE_STAT_ST_BLOCKS appropriately. * Fixes a typo in configure.ac * Restore lines in RELEASE.txt. * Updated configure with reconfigure. Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com> Co-authored-by: Allen Byrne <50328838+byrnHDF@users.noreply.github.com> Co-authored-by: bmribler <39579120+bmribler@users.noreply.github.com> * RELEASE.txt cleanup. * Hdf5 1 8 22 (#261) * Restores maintainer mode in the autotools (#200) Maintainer mode should be enabled in development branches. Also adds helpful commenting. Add bin/switch_maint_mode Disable maintainer mode for release. Fix incomplete merge for stub functions in H5Fdhdfs.c * Update configure for Restores maintainer mode in the autotools (#200). * Update MANIFEST for switch_maint_mode script. * Update so numbers for 1.8.22 release. * Add so numbers changes in Makefile.ins for 1.8.22 release. * Update pkgconfig settings with version - #218 (#223) * Add notice of final HDFF5 1.8 release. Add solaris 64bit alignment issue to "Known Problems". * Update 1.8 final release notice. * Update CMake/HDF5Examples version in bin/release * Fixed typo in an error message. (#227) * Remove duplicate setting (#239) * RELEASE.txt cleanup. Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com> Co-authored-by: Allen Byrne <50328838+byrnHDF@users.noreply.github.com> Co-authored-by: bmribler <39579120+bmribler@users.noreply.github.com> * Add macOS Big Sur to tested machines, also missing entries for macOS 10.13 and 10.14. * )Update version. * Hdf5 1 8 22 (#266) * Restores maintainer mode in the autotools (#200) Maintainer mode should be enabled in development branches. Also adds helpful commenting. Add bin/switch_maint_mode Disable maintainer mode for release. Fix incomplete merge for stub functions in H5Fdhdfs.c * Update configure for Restores maintainer mode in the autotools (#200). * Update MANIFEST for switch_maint_mode script. * Update so numbers for 1.8.22 release. * Add so numbers changes in Makefile.ins for 1.8.22 release. * Update pkgconfig settings with version - #218 (#223) * Add notice of final HDFF5 1.8 release. Add solaris 64bit alignment issue to "Known Problems". * Update 1.8 final release notice. * Update CMake/HDF5Examples version in bin/release * Fixed typo in an error message. (#227) * Remove duplicate setting (#239) * RELEASE.txt cleanup. * Add macOS Big Sur to tested machines, also missing entries for macOS 10.13 and 10.14. * )Update version. Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com> Co-authored-by: Allen Byrne <50328838+byrnHDF@users.noreply.github.com> Co-authored-by: bmribler <39579120+bmribler@users.noreply.github.com> * Reverts lock/unlock callback signature to 1.8.21 version (#254) * Reverts lock/unlock callback signature to 1.8.21 version This callback is unused in 1.8. The ros3 and hdfs VFDs are the only VFDs that have the lock callback implemented and that is just as no-op stubs. These stubs were removed so the callbacks are now NULL pointers, like the other VFDs in 1.8. * Trivial whitespace fix * Update version to 1.8.22-14. * Hdf5 1 8 22 - Reverts lock/unlock callback signature to 1.8.21 version (#267) * Restores maintainer mode in the autotools (#200) Maintainer mode should be enabled in development branches. Also adds helpful commenting. Add bin/switch_maint_mode Disable maintainer mode for release. Fix incomplete merge for stub functions in H5Fdhdfs.c * Update configure for Restores maintainer mode in the autotools (#200). * Update MANIFEST for switch_maint_mode script. * Update so numbers for 1.8.22 release. * Add so numbers changes in Makefile.ins for 1.8.22 release. * Update pkgconfig settings with version - #218 (#223) * Add notice of final HDFF5 1.8 release. Add solaris 64bit alignment issue to "Known Problems". * Update 1.8 final release notice. * Update CMake/HDF5Examples version in bin/release * Fixed typo in an error message. (#227) * Remove duplicate setting (#239) * RELEASE.txt cleanup. * Add macOS Big Sur to tested machines, also missing entries for macOS 10.13 and 10.14. * )Update version. * Reverts lock/unlock callback signature to 1.8.21 version (#254) * Reverts lock/unlock callback signature to 1.8.21 version This callback is unused in 1.8. The ros3 and hdfs VFDs are the only VFDs that have the lock callback implemented and that is just as no-op stubs. These stubs were removed so the callbacks are now NULL pointers, like the other VFDs in 1.8. * Trivial whitespace fix * Update version to 1.8.22-14. Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com> Co-authored-by: Allen Byrne <50328838+byrnHDF@users.noreply.github.com> Co-authored-by: bmribler <39579120+bmribler@users.noreply.github.com> * Update version in H5public.h * Hdf5 1 8 22 (#269) * Restores maintainer mode in the autotools (#200) Maintainer mode should be enabled in development branches. Also adds helpful commenting. Add bin/switch_maint_mode Disable maintainer mode for release. Fix incomplete merge for stub functions in H5Fdhdfs.c * Update configure for Restores maintainer mode in the autotools (#200). * Update MANIFEST for switch_maint_mode script. * Update so numbers for 1.8.22 release. * Add so numbers changes in Makefile.ins for 1.8.22 release. * Update pkgconfig settings with version - #218 (#223) * Add notice of final HDFF5 1.8 release. Add solaris 64bit alignment issue to "Known Problems". * Update 1.8 final release notice. * Update CMake/HDF5Examples version in bin/release * Fixed typo in an error message. (#227) * Remove duplicate setting (#239) * RELEASE.txt cleanup. * Add macOS Big Sur to tested machines, also missing entries for macOS 10.13 and 10.14. * )Update version. * Reverts lock/unlock callback signature to 1.8.21 version (#254) * Reverts lock/unlock callback signature to 1.8.21 version This callback is unused in 1.8. The ros3 and hdfs VFDs are the only VFDs that have the lock callback implemented and that is just as no-op stubs. These stubs were removed so the callbacks are now NULL pointers, like the other VFDs in 1.8. * Trivial whitespace fix * Update version to 1.8.22-14. * Update version in H5public.h Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com> Co-authored-by: Allen Byrne <50328838+byrnHDF@users.noreply.github.com> Co-authored-by: bmribler <39579120+bmribler@users.noreply.github.com> * Set version 1.8.22 for release. * dd RELEASE.txt entry for HDFFV-10741. * Hdf5 1 8 22 (#279) * Restores maintainer mode in the autotools (#200) Maintainer mode should be enabled in development branches. Also adds helpful commenting. Add bin/switch_maint_mode Disable maintainer mode for release. Fix incomplete merge for stub functions in H5Fdhdfs.c * Update configure for Restores maintainer mode in the autotools (#200). * Update MANIFEST for switch_maint_mode script. * Update so numbers for 1.8.22 release. * Add so numbers changes in Makefile.ins for 1.8.22 release. * Update pkgconfig settings with version - #218 (#223) * Add notice of final HDFF5 1.8 release. Add solaris 64bit alignment issue to "Known Problems". * Update 1.8 final release notice. * Update CMake/HDF5Examples version in bin/release * Fixed typo in an error message. (#227) * Remove duplicate setting (#239) * RELEASE.txt cleanup. * Add macOS Big Sur to tested machines, also missing entries for macOS 10.13 and 10.14. * )Update version. * Reverts lock/unlock callback signature to 1.8.21 version (#254) * Reverts lock/unlock callback signature to 1.8.21 version This callback is unused in 1.8. The ros3 and hdfs VFDs are the only VFDs that have the lock callback implemented and that is just as no-op stubs. These stubs were removed so the callbacks are now NULL pointers, like the other VFDs in 1.8. * Trivial whitespace fix * Update version to 1.8.22-14. * Update version in H5public.h * Set version 1.8.22 for release. * dd RELEASE.txt entry for HDFFV-10741. Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com> Co-authored-by: Allen Byrne <50328838+byrnHDF@users.noreply.github.com> Co-authored-by: bmribler <39579120+bmribler@users.noreply.github.com> * Improve performance of multiple calls to H5Sget_select_elem_pointlist (#270) (#277) * Cache the pointer to the next point to process after the last call to H5S__get_select_elem_pointlist. This allows the normal process of iterating over the points in batches to be much more efficient, as the library does not need to traverse the entirety of the preceding points every time the funciton is re-entered. * Update RELEASE.txt for point selection iteration performance fix. * Hdf5 1 8 22 (#281) * Restores maintainer mode in the autotools (#200) Maintainer mode should be enabled in development branches. Also adds helpful commenting. Add bin/switch_maint_mode Disable maintainer mode for release. Fix incomplete merge for stub functions in H5Fdhdfs.c * Update configure for Restores maintainer mode in the autotools (#200). * Update MANIFEST for switch_maint_mode script. * Update so numbers for 1.8.22 release. * Add so numbers changes in Makefile.ins for 1.8.22 release. * Update pkgconfig settings with version - #218 (#223) * Add notice of final HDFF5 1.8 release. Add solaris 64bit alignment issue to "Known Problems". * Update 1.8 final release notice. * Update CMake/HDF5Examples version in bin/release * Fixed typo in an error message. (#227) * Remove duplicate setting (#239) * RELEASE.txt cleanup. * Add macOS Big Sur to tested machines, also missing entries for macOS 10.13 and 10.14. * )Update version. * Reverts lock/unlock callback signature to 1.8.21 version (#254) * Reverts lock/unlock callback signature to 1.8.21 version This callback is unused in 1.8. The ros3 and hdfs VFDs are the only VFDs that have the lock callback implemented and that is just as no-op stubs. These stubs were removed so the callbacks are now NULL pointers, like the other VFDs in 1.8. * Trivial whitespace fix * Update version to 1.8.22-14. * Update version in H5public.h * Set version 1.8.22 for release. * dd RELEASE.txt entry for HDFFV-10741. * Improve performance of multiple calls to H5Sget_select_elem_pointlist (#270) (#277) * Cache the pointer to the next point to process after the last call to H5S__get_select_elem_pointlist. This allows the normal process of iterating over the points in batches to be much more efficient, as the library does not need to traverse the entirety of the preceding points every time the funciton is re-entered. * Update RELEASE.txt for point selection iteration performance fix. Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com> Co-authored-by: Allen Byrne <50328838+byrnHDF@users.noreply.github.com> Co-authored-by: bmribler <39579120+bmribler@users.noreply.github.com> Co-authored-by: Neil Fortner <nfortne2@hdfgroup.org> * Hdf5 1 8 22 (#284) * Fixed typo in an error message. * Updated for HDFFV-11150, HDFFV-10480, and HDFFV-11159 * Update "Support for New Platforms and Compilers" section in RELEASE.txt; add check_version workaround for binary compatibility to "Known Problems". * Add SUSE Linux to tested platforms. * Update numbers in config/lt_vers.am and run bin/reconfigure for so numbers. * Update version in 3 files missed by merge. Co-authored-by: Allen Byrne <byrn@hdfgroup.org> Co-authored-by: Vailin Choi <vchoi@hdfgroup.org> Co-authored-by: vchoi <vchoi@jelly.ad.hdfgroup.org> Co-authored-by: hdftest <hdftest@hdfgroup.org> Co-authored-by: Jordan Henderson <jhenderson@hdfgroup.org> Co-authored-by: Dana Robinson <derobins@hdfgroup.org> Co-authored-by: Binh-Minh Ribler <bmribler@hdfgroup.org> Co-authored-by: Allen Byrne <50328838+byrnHDF@users.noreply.github.com> Co-authored-by: bmribler <39579120+bmribler@users.noreply.github.com> Co-authored-by: H. Joe Lee <hyoklee@hdfgroup.org> Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com> Co-authored-by: Neil Fortner <nfortne2@hdfgroup.org>
* Change copyright headers to replace url referring to file to belrknox2017-05-161-6/+4
| | | | removed and replace it with new url for COPYING file.
* Bring fix for HDFFV-9697 from develop branch.Vailin Choi2017-03-071-3/+9
| | | | | Populate the fix for HDFFV-9697: Fix for unknown message from develop branch. Tested on ostrich, platypus, kite, quail, osx1010test, emu, mayll, moohan, kituo.
* [svn-r30145] Merge of checkin #30143 to the trunk which is a bug fix for ↵Vailin Choi2016-07-041-0/+5
| | | | | | HDFFV-9940. Tested on oxs1010test, moohan, platypus, emu, kite, kituo, mayll, ostrich, quail.
* [svn-r29837] Partial fix for Valgrind issue in test/external.cDana Robinson2016-04-291-0/+4
| | | | | Tested on: 64-bit Ubuntu 15.10 w/ gcc 5.2.1 autotools serial
* [svn-r29702] Merged r29182 and 29183 from the trunk.Dana Robinson2016-04-151-3/+112
| | | | | | | | | Fixes HDFFV-8740 (external file storage relative path fix). Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1 serial autotools w/ C++ & Fortran parallel autotools (MPICH 3.1.4) w/ Fortran serial CMake
* [svn-r27941] Merge r27939 from trunkJerome Soumagne2015-10-021-37/+11
| | | | | Add internal library callback to H5S_select_iterate to avoid having to pass hid_t objects internally
* [svn-r27165] Merge 27133 & 27158 from trunk:Mohamad Chaarawi2015-06-081-3/+3
| | | | | | | | | - Add a new attribute function characterstic for format: * H5_ATTR_FORMAT(X,Y,Z) __attribute__((format(X, Y, Z))) - Rename UNUSED attribute characterstic to H5_ATTR_UNUSED. - Rename NORETURN attribute characterstic to H5_ATTR_NORETURN tested with h5committest.
* [svn-r27108] Description:Quincey Koziol2015-05-231-12/+16
| | | | | | | | | | Bring r26213 from trunk to 1.8 branch: Minor code cleanups, to align with revise_chunks branch. Tested on: Mac OSX/64 10.10.2 (amazon) w/serial & parallel (h5committested on trunk for 2+ weeks)
* [svn-r25996] - merge changes from trunk to eliminate usage of IS_H5FD_MPI Macro.Mohamad Chaarawi2015-01-211-3/+3
| | | | | | - add 2 missing feature flags for VFDs: H5FD_FEAT_HAS_MPI & H5FD_FEAT_ALLOCATE_EARLY and use them as appropriate. tested with h5commitest
* [svn-r25497] Description:Quincey Koziol2014-07-301-13/+18
| | | | | | | | | | Merge changes that correspond to the 64-bit ID changes (without the actual switch to 64-bit IDs) to the 1.8 release branch. (Plus a few minor cleanups and alignments with the trunk that aren't on the branch) Tested on: Mac OSX/64 10.9.4 (amazon) w/C++ & FORTRAN (h5committested on branch already for a week)
* [svn-r25490] bring 25468 from trunk. Mohamad Chaarawi2014-07-291-0/+269
| | | | | | | Aligning code with changes made in VOL branch. This will make porting non VOL related changes from trunkto the 1.8 branch much easier. tested h5commitest.
* [svn-r25109] Description:Quincey Koziol2014-04-251-1/+1
| | | | | | | | | | | | | | | | | | | | | | | | | | | Bring r25084, 25088, 25092, 25097 from trunk to 1.8 branch: r25084: Begin process of migrating from using property list IDs internally to the library to using the internal generic property list data structure. r25088: Introduce "file I/O info" struct, to hold file & dxpl pointers, and start propagating up through library. r25092: More migration to using H5F_io_info_t pointers and away from using property list IDs internally. Also, clean up some compiler warnings in the cache code. r25097: Make progress toward moving from DXPL IDs to property list structures within the library. Also move the signature location code from the H5F package to the H5FD package, where it's a better fit. Also, clean up some more compiler warnings along the way. Tested: Mac OSX/64 10.9.2 (amazon) w/C++, FORTRAN & parallel (h5committested on trunk)
* [svn-r25050] Description:Quincey Koziol2014-04-161-0/+6
| | | | | | | | | | | | | | | Bring r24995 and r24998 from the trunk to the 1.8 branch: r24995: Improve checks for NULL buffer from user during H5Dread/H5Dwrite calls. r24998: Check in Neil's changes for correctly handling case where library is reinitialized through a deprecated routine. Tested on: Mac OSX/64 10.9.2 (amazon) w/serial & paralle (change has baked on trunk for >7 days)
* [svn-r24785] Description:Quincey Koziol2014-03-121-4/+4
| | | | | | | | | | | | | Bring r24769 & r24772 from trunk to 1.8 branch: Check in Mohamad's changes to support collective I/O on point selections, along with some other minor cleanups. Correct some dynamically sized arrays that fail on Windows. Tested on: Mac OSX/64 10.9.2 (amazon) w/parallel (And has been through the daily test regime on the trunk)
* [svn-r24262] Description:Quincey Koziol2013-10-071-2/+1
| | | | | | | | | | | | | | | | | | | Bring r24256 & r24261 from trunk to 1.8 branch: Switch H5I internal data structure from using hash table to skip lists. Also, a few misc. cleanups. Tested on: FreeBSD/32 8.2 (loyalty) w/gcc4.6, w/C++ & FORTRAN, in debug mode FreeBSD/64 8.2 (freedom) w/gcc4.6, w/C++ & FORTRAN, in debug mode Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (koala) w/Intel compilers, w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.11 (emu) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, w/threadsafe, in production mode Linux/PPC 2.6 (ostrich) w/C++ & FORTRAN, w/threadsafe, in debug mode
* [svn-r23719] Description:Quincey Koziol2013-05-291-6/+6
| | | | | | | | | | | | Bring r23713 and r23717 from trunk to 1.8 branch: Clean up warnings, switch library code to use Standard C/POSIX wrapper macros, remove internal calls to API routines, update checkapi and checkposix scripts. Tested on: Mac OSX/64 10.8.3 (amazon) w/C++ & FORTRAN Big-Endian Linux/64 (ostrich)
* [svn-r22583] Description:Quincey Koziol2012-07-161-1/+10
| | | | | | | | | | | Bring r22582 from trunk to 1.8 branch: Refactor ID class registration to be more like how other "class"s in the library are registered, and clean up compiler warnings. Tested on: Mac OSX/64 10.7.4 (amazon) w/debug (Too minor to require h5comittest)
* [svn-r22291] Description:Quincey Koziol2012-04-171-156/+155
| | | | | | | | | | Bring r22287 from trunk to 1.8 branch: Clean up more FUNC_ENTER/FUNC_LEAVE macros and move H5D & H5T code toward the final design (as exemplified by the H5EA & H5FA code). Tested on: Mac OSX/64 10.7.3 (amazon) w/debug & parallel
* [svn-r22252] Fixed a bug in H5Ocopy(): When copying an opened object, call ↵Vailin Choi2012-04-051-1/+0
| | | | | | | | | | | | | | | | | | | | | the object's flush class action to ensure that cached data is flushed so that H5Ocopy will get the correct data. (HDFFV-7853) this line, and those below, will be ignored-- _M . M test/objcopy.c M src/H5Ocopy.c M src/H5Goh.c M src/H5Dint.c M src/H5Opkg.h M src/H5Doh.c M src/H5Toh.c M src/H5O.c M src/H5Dpkg.h M release_docs/RELEASE.txt _M fortran
* [svn-r22228] Description:Quincey Koziol2012-04-011-1/+2
| | | | | | | | | Bring r22219 from trunk to 1.8 branch: (with release manager's blessing) Merge "file image" changes from feature branch back to trunk. Tested on: h5committested
* [svn-r22059] Description:Quincey Koziol2012-03-131-6/+11
| | | | | | | | | Bring r22058 from trunk to 1.8 branch: Better fix for zero-sized dataset error (r22053). Tested on: Mac OSX/64 10.7.3 (amazon) w/debug & parallel
* [svn-r21925] Description:Quincey Koziol2012-02-101-39/+39
| | | | | | | | | | | | | | Bring r21919-21924 from trunk to 1.8 branch: cleanup FUNC_ENTER macros, etc. Also removed Subversion mergeinfo tags from a few directories and files. These are artifacts from non-root merges using pre-1.6 Subversion clients. (This should fix the problem of unchanged directories looking "changed" during checkins.) Tested on: Mac OSX/64 10.7.3 (amazon) w/debug & production (daily tested on trunk)
* [svn-r21918] Description:Quincey Koziol2012-02-081-1/+1
| | | | | | | | | | | | Bring r21917 from trunk to 1.8 branch: Bring [spirit of] r20393 from coverity branch back to trunk: Move initialization ocrt_info.new_obj = NULL; before FUNC_ENTER_NOAPI -- gh Tested on: Mac OS X/64 10.7.3 (amazon) w/debug, production & parallel (too minor to require h5committest)
* [svn-r20692] Purpose: Fix problem exposed by external link cacheNeil Fortner2011-05-021-1/+6
| | | | | | | | | | | | | Description: When closing an object that had two open id's, the library would previously fail to account for the status of the "holding_file" field, potentially causing the file's "nopen_objs" field to become inconsistent. This caused problems when opening the same object twice through an external link using th external file cache. Modified the library to properly account for the status of the "holding_file" field when closing an object id, even when the underlying "shared" object isn't closed. Tested: jam, koala, heiwa (h5committest)
* [svn-r20489] Bug 1386 - allow dimension size to be zero even though it isn't ↵Raymond Lu2011-04-131-10/+17
| | | | | | | | | | | | | | | | unlimited. I brought the changes from the trunk as below: 1. I added test cases for contiguous, compact, and chunked, and external storage datasets, and also attribute. The test includes dataspace selections. 2. I added a test case of extending dataset of zero dimension size and shrinking back to zero dimension size. 3. I updated the Makefile to include the new data file to be cleaned up. 4. The dataspace code has another bug - when the maximal dimension isn't passed in for H5Sset_extent_simple, it is supposed to be same as the dimension. The current library sets NULL to it. I corrected it and added a test case to it. 5. I corrected the tests of Fortran and C++ for the problem in point 3. Tested on jam, heiwa, and amani.
* [svn-r20136] Description:Quincey Koziol2011-02-221-2/+40
| | | | | | | | | | | | | | Bring r20135 from trunk to 1.8 branch: Bring r20134 from metadata journaling merging branch to trunk: Bring changes from metadata journaling branch to "merging" branch: Unify routine to mark a dataset's metadata as changed. Tested on: FreeBSD/32 6.3 (duty) in debug mode (h5committested on trunk)
* [svn-r19593] Bug fix: H5D_create should return NULL on failure but one of ↵Albert Cheng2010-10-131-1/+1
| | | | | | | | | | return code was FAILED. Rejected by the xlc compiler. Solution: changed it to reutrn NULL. Tested: UP make passed. serial passed but some parallel tests failed. The parallel tests failed were not related to this fix.
* [svn-r19588] Description:Quincey Koziol2010-10-131-1/+3
| | | | | | | | | | | | | | | | | | | | Bring r19587 from trunk to 1.8 branch: Address issue with object headers being created getting evicted from the metadata cache cache before they are completely initialized. This is done by pinning the object header in the cache until it is completely initialized and attached to a group. Tested on: FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode Linux/64-amd64 2.6 (amani) w/Intel compilers, w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, w/threadsafe, in production mode Linux/PPC 2.6 (heiwa) w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode
* [svn-r19414] Error return value was FAIL. Should be NULL.Albert Cheng2010-09-171-1/+1
| | | | Tested: LLNL up which this was flagged.
* [svn-r19399] Description:Quincey Koziol2010-09-161-10/+8
| | | | | | | | | | | | | | Bring r19398 from trunk to 1.8 branch: Clean up the internal usage H5I_dec_ref() to eliminate the sequence of flags that has been creeping in. Tested on: FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in debug mode
* [svn-r19359] When mandatory filter failed to write data chunks, the datasetRaymond Lu2010-09-081-10/+11
| | | | | | | couldn't close (bug 1260). The fix releases all resources and closes the dataset but returns a failure. Tested with h5committest - jam, heiwa, amani.
* [svn-r18895] Purpose: Improve allocation performance of filtered datasets ↵Neil Fortner2010-05-251-4/+4
| | | | | | | | | | | | | with non-default VL fill values. Description: Previously, H5D_chunk_allocate would, if a dataset were filtered and had a non-default VL fill value, allocate a new buffer for every chunk. Changed H5D_chunk_allocate to reuse the existing buffer if possible. Also other miscellaneous cleanup. Tested: jam, linew, amani (h5committest)
* [svn-r18652] Description:Quincey Koziol2010-04-271-1/+3
| | | | | | | | | | | | Bring r18650 from trunk to 1.8 branch: Bring back various minor tweaks & cleanups from the revise_chunks branch. Tested on: FreeBSD/32 6.3 (duty) in debug mode Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in production mode (h5committested on trunk)
* [svn-r18619] Description:Quincey Koziol2010-04-221-8/+7
| | | | | | | | | | | | | | | | | Bring r18618 from trunk to 1.8 branch: Add new internal object header routines to query the header chunk that a message is in, and to lock/unlock a message into a chunk (so it doesn't get moved into another chunk during allocation/free events). Also, move dataspace message to beginning of object header messages added to a dataset's object header, so it can be locked into chunk #0 (when performing SWMR operations). Tested on: FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode (h5committested on trunk)
* [svn-r18596] Description:Quincey Koziol2010-04-201-8/+20
| | | | | | | | | | Bring r18595 from trunk to 1.8 branch: Clean up compiler warnings Tested on: Mac OS X/32 10.6.3 (amazon) w/debug (too minor to require h5committest)
* [svn-r18574] Description:Quincey Koziol2010-04-151-3/+2
| | | | | | | | | | | | | | | | | | | | | | | Bring r18571 from trunk to 1.8 branch: Bring r18542 from metadata journaling "merging" branch to trunk: Bring new object header pin/unpin & protect/unprotect routines and split-out object header chunk proxy changes from metadata_journaling branch to "merging" branch, along with some other minor tweaks to clean up compiler warnings, etc. Also: clean up chunk protect/unprotect calls when allocating or freeing space in a chunk, optimize metadata accumulator code to avoid some re-reading of information from the file, refactor H5O_pin/H5O_unpin from way they are done on the merging branch back to way they were previously done on trunk, other minor code cleanups, etc. Tested on: FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in production mode (h5committested on trunk)
* [svn-r18446] Purpose: Fix bug 1637Neil Fortner2010-03-241-12/+21
| | | | | | | | | | Description: Modified algorithm for extending a dataset with early allocation so it only deals with the new chunks. Formerly, it would loop over all chunks, checking to see if each existed in cache and on disk, causing major performance issues with large numbers of chunks. Tested: jam, linew, amani (h5committest)
* [svn-r18358] Description:Quincey Koziol2010-03-021-0/+2
| | | | | | | | | | | | | | | | | Bring r18357 from trunk to 1.8 branch: Bring r18356 from metadata journaling merge branch to trunk: Converge metadata journaling branch with trunk with a bunch of v1 B-tree changes: - Remove H5ACprivate.h header from H5Bprivate.h header - Revise v1 B-tree client callbacks - Get rid of H5B_serialize() by bringing it into H5B_flush() Tested on: FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in production mode
* [svn-r18213] Description:Quincey Koziol2010-02-05