diff options
author | Allen Byrne <50328838+byrnHDF@users.noreply.github.com> | 2023-08-28 15:10:30 (GMT) |
---|---|---|
committer | GitHub <noreply@github.com> | 2023-08-28 15:10:30 (GMT) |
commit | bfe867c4cb7b636da21ff4245a2c1da6d96f1955 (patch) | |
tree | 255458f04e77656b28b06aa0d058bacaa78c069c | |
parent | 11f3fee390def4b6af0a3770db8a9f53f8805dfc (diff) | |
download | hdf5-bfe867c4cb7b636da21ff4245a2c1da6d96f1955.zip hdf5-bfe867c4cb7b636da21ff4245a2c1da6d96f1955.tar.gz hdf5-bfe867c4cb7b636da21ff4245a2c1da6d96f1955.tar.bz2 |
sync cmake and examples changes (#3438)
* sync cmake and examples changes
* Add java lib changes
* Update jave log files
* Update java logger version
* More logger version changes
31 files changed, 192 insertions, 118 deletions
diff --git a/.gitattributes b/.gitattributes index 2c6dbc5..d060a25 100644 --- a/.gitattributes +++ b/.gitattributes @@ -191,12 +191,12 @@ java/examples/testfiles/examples.intro.H5_CreateGroup.txt -text java/examples/testfiles/examples.intro.H5_CreateGroupAbsoluteRelative.txt -text java/examples/testfiles/examples.intro.H5_CreateGroupDataset.txt -text java/examples/testfiles/examples.intro.H5_ReadWrite.txt -text -java/lib/ext/slf4j-nop-1.7.33.jar -text svneol=unset#application/zip -java/lib/ext/slf4j-simple-1.7.33.jar -text svneol=unset#application/zip +java/lib/ext/slf4j-nop-2.0.6.jar -text svneol=unset#application/zip +java/lib/ext/slf4j-simple-2.0.6.jar -text svneol=unset#application/zip java/lib/hamcrest-core.jar -text svneol=unset#application/java-archive java/lib/junit.jar -text svneol=unset#application/java-archive java/lib/simplelogger.properties -text -java/lib/slf4j-api-1.7.33.jar -text svneol=unset#application/zip +java/lib/slf4j-api-2.0.6.jar -text svneol=unset#application/zip java/src/CMakeLists.txt -text java/src/Makefile.am -text java/src/hdf/CMakeLists.txt -text diff --git a/.github/workflows/cmake-ctest.yml b/.github/workflows/cmake-ctest.yml index dd65ed0..55d1ca0 100644 --- a/.github/workflows/cmake-ctest.yml +++ b/.github/workflows/cmake-ctest.yml @@ -65,13 +65,13 @@ jobs: - name: Publish binary (Windows) id: publish-ctest-binary run: | - mkdir "${{ runner.workspace }}/build" - mkdir "${{ runner.workspace }}/build/hdf5" - Copy-Item -Path ${{ runner.workspace }}/hdf5/hdfsrc/COPYING -Destination ${{ runner.workspace }}/build/hdf5/ - Copy-Item -Path ${{ runner.workspace }}/hdf5/hdfsrc/COPYING_LBNL_HDF5 -Destination ${{ runner.workspace }}/build/hdf5/ - Copy-Item -Path ${{ runner.workspace }}/hdf5/hdfsrc/README.md -Destination ${{ runner.workspace }}/build/hdf5/ - Copy-Item -Path ${{ runner.workspace }}/hdf5/build/ci-StdShar-MSVC/* -Destination ${{ runner.workspace }}/build/hdf5/ -Include *.zip - cd "${{ runner.workspace }}/build" + mkdir "${{ runner.workspace }}/build110" + mkdir "${{ runner.workspace }}/build110/hdf5" + Copy-Item -Path ${{ runner.workspace }}/hdf5/hdfsrc/COPYING -Destination ${{ runner.workspace }}/build110/hdf5/ + Copy-Item -Path ${{ runner.workspace }}/hdf5/hdfsrc/COPYING_LBNL_HDF5 -Destination ${{ runner.workspace }}/build110/hdf5/ + Copy-Item -Path ${{ runner.workspace }}/hdf5/hdfsrc/README.md -Destination ${{ runner.workspace }}/build110/hdf5/ + Copy-Item -Path ${{ runner.workspace }}/hdf5/build110/ci-StdShar-MSVC/* -Destination ${{ runner.workspace }}/build110/hdf5/ -Include *.zip + cd "${{ runner.workspace }}/build110" 7z a -tzip ${{ steps.set-file-base.outputs.FILE_BASE }}-win_vs2022.zip hdf5 shell: pwsh @@ -86,7 +86,7 @@ jobs: uses: actions/upload-artifact@v3 with: name: zip-vs2022-binary - path: ${{ runner.workspace }}/build/${{ steps.set-file-base.outputs.FILE_BASE }}-win_vs2022.zip + path: ${{ runner.workspace }}/build110/${{ steps.set-file-base.outputs.FILE_BASE }}-win_vs2022.zip if-no-files-found: error # 'warn' or 'ignore' are also available, defaults to `warn` build_and_test_linux: @@ -128,13 +128,13 @@ jobs: - name: Publish binary (Linux) id: publish-ctest-binary run: | - mkdir "${{ runner.workspace }}/build" - mkdir "${{ runner.workspace }}/build/hdf5" - cp ${{ runner.workspace }}/hdf5/hdfsrc/COPYING ${{ runner.workspace }}/build/hdf5 - cp ${{ runner.workspace }}/hdf5/hdfsrc/COPYING_LBNL_HDF5 ${{ runner.workspace }}/build/hdf5 - cp ${{ runner.workspace }}/hdf5/hdfsrc/README.md ${{ runner.workspace }}/build/hdf5 - cp ${{ runner.workspace }}/hdf5/build/ci-StdShar-GNUC/*.tar.gz ${{ runner.workspace }}/build/hdf5 - cd "${{ runner.workspace }}/build" + mkdir "${{ runner.workspace }}/build110" + mkdir "${{ runner.workspace }}/build110/hdf5" + cp ${{ runner.workspace }}/hdf5/hdfsrc/COPYING ${{ runner.workspace }}/build110/hdf5 + cp ${{ runner.workspace }}/hdf5/hdfsrc/COPYING_LBNL_HDF5 ${{ runner.workspace }}/build110/hdf5 + cp ${{ runner.workspace }}/hdf5/hdfsrc/README.md ${{ runner.workspace }}/build110/hdf5 + cp ${{ runner.workspace }}/hdf5/build110/ci-StdShar-GNUC/*.tar.gz ${{ runner.workspace }}/build110/hdf5 + cd "${{ runner.workspace }}/build110" tar -zcvf ${{ steps.set-file-base.outputs.FILE_BASE }}-ubuntu-2204.tar.gz hdf5 shell: bash @@ -148,7 +148,7 @@ jobs: uses: actions/upload-artifact@v3 with: name: tgz-ubuntu-2204-binary - path: ${{ runner.workspace }}/build/${{ steps.set-file-base.outputs.FILE_BASE }}-ubuntu-2204.tar.gz + path: ${{ runner.workspace }}/build110/${{ steps.set-file-base.outputs.FILE_BASE }}-ubuntu-2204.tar.gz if-no-files-found: error # 'warn' or 'ignore' are also available, defaults to `warn` # Save doxygen files created by ctest script @@ -156,7 +156,7 @@ jobs: uses: actions/upload-artifact@v3 with: name: docs-doxygen - path: ${{ runner.workspace }}/hdf5/build/ci-StdShar-GNUC/hdf5lib_docs/html + path: ${{ runner.workspace }}/hdf5/build110/ci-StdShar-GNUC/hdf5lib_docs/html if-no-files-found: error # 'warn' or 'ignore' are also available, defaults to `warn` build_and_test_mac: @@ -203,13 +203,13 @@ jobs: - name: Publish binary (MacOS) id: publish-ctest-binary run: | - mkdir "${{ runner.workspace }}/build" - mkdir "${{ runner.workspace }}/build/hdf5" - cp ${{ runner.workspace }}/hdf5/hdfsrc/COPYING ${{ runner.workspace }}/build/hdf5 - cp ${{ runner.workspace }}/hdf5/hdfsrc/COPYING_LBNL_HDF5 ${{ runner.workspace }}/build/hdf5 - cp ${{ runner.workspace }}/hdf5/hdfsrc/README.md ${{ runner.workspace }}/build/hdf5 - cp ${{ runner.workspace }}/hdf5/build/ci-StdShar-Clang/*.tar.gz ${{ runner.workspace }}/build/hdf5 - cd "${{ runner.workspace }}/build" + mkdir "${{ runner.workspace }}/build110" + mkdir "${{ runner.workspace }}/build110/hdf5" + cp ${{ runner.workspace }}/hdf5/hdfsrc/COPYING ${{ runner.workspace }}/build110/hdf5 + cp ${{ runner.workspace }}/hdf5/hdfsrc/COPYING_LBNL_HDF5 ${{ runner.workspace }}/build110/hdf5 + cp ${{ runner.workspace }}/hdf5/hdfsrc/README.md ${{ runner.workspace }}/build110/hdf5 + cp ${{ runner.workspace }}/hdf5/build110/ci-StdShar-Clang/*.tar.gz ${{ runner.workspace }}/build110/hdf5 + cd "${{ runner.workspace }}/build110" tar -zcvf ${{ steps.set-file-base.outputs.FILE_BASE }}-osx12.tar.gz hdf5 shell: bash @@ -223,6 +223,6 @@ jobs: uses: actions/upload-artifact@v3 with: name: tgz-osx12-binary - path: ${{ runner.workspace }}/build/${{ steps.set-file-base.outputs.FILE_BASE }}-osx12.tar.gz + path: ${{ runner.workspace }}/build110/${{ steps.set-file-base.outputs.FILE_BASE }}-osx12.tar.gz if-no-files-found: error # 'warn' or 'ignore' are also available, defaults to `warn` diff --git a/CMakeInstallation.cmake b/CMakeInstallation.cmake index 25c6e7f..1fb7714 100644 --- a/CMakeInstallation.cmake +++ b/CMakeInstallation.cmake @@ -138,7 +138,7 @@ install ( option (HDF5_PACK_EXAMPLES "Package the HDF5 Library Examples Compressed File" OFF) if (HDF5_PACK_EXAMPLES) configure_file ( - ${HDF_RESOURCES_DIR}/HDF5_Examples.cmake.in + ${HDF_RESOURCES_DIR}/examples/HDF5_Examples.cmake.in ${HDF5_BINARY_DIR}/HDF5_Examples.cmake @ONLY ) install ( @@ -146,17 +146,58 @@ if (HDF5_PACK_EXAMPLES) DESTINATION ${HDF5_INSTALL_DATA_DIR} COMPONENT hdfdocuments ) - if (EXISTS "${HDF5_EXAMPLES_COMPRESSED_DIR}/${HDF5_EXAMPLES_COMPRESSED}") - execute_process( - COMMAND ${CMAKE_COMMAND} -E tar xzf ${HDF5_EXAMPLES_COMPRESSED_DIR}/${HDF5_EXAMPLES_COMPRESSED} - ) - install ( - DIRECTORY ${HDF5_BINARY_DIR}/HDF5Examples - DESTINATION ${HDF5_INSTALL_DATA_DIR} - USE_SOURCE_PERMISSIONS - COMPONENT hdfdocuments - ) + + option (EXAMPLES_USE_RELEASE_NAME "Use the released examples artifact name" OFF) + option (EXAMPLES_DOWNLOAD "Download to use released examples files" OFF) + if (EXAMPLES_DOWNLOAD) + if (EXAMPLES_USE_RELEASE_NAME) + set (EXAMPLES_NAME ${EXAMPLES_TGZ_ORIGNAME}) + else () + set (EXAMPLES_NAME ${HDF5_EXAMPLES_COMPRESSED}) + endif () + if (NOT EXAMPLES_USE_LOCALCONTENT) + set (EXAMPLES_URL ${EXAMPLES_TGZ_ORIGPATH}/${EXAMPLES_NAME}) + file (DOWNLOAD ${EXAMPLES_URL} ${HDF5_BINARY_DIR}/${HDF5_EXAMPLES_COMPRESSED} STATUS EX_DL) + message (STATUS "Examples file is ${EXAMPLES_URL} STATUS=${EX_DL}") + else () + set (EXAMPLES_URL ${TGZPATH}/${EXAMPLES_NAME}) + file (COPY_FILE ${EXAMPLES_URL} ${HDF5_BINARY_DIR}/${HDF5_EXAMPLES_COMPRESSED} RESULT EX_DL) + message (STATUS "Examples file is ${EXAMPLES_URL} RESULT=${EX_DL}") + endif () + if (EXISTS "${HDF5_BINARY_DIR}/${HDF5_EXAMPLES_COMPRESSED}") + execute_process( + COMMAND ${CMAKE_COMMAND} -E tar xzf ${HDF5_EXAMPLES_COMPRESSED} + WORKING_DIRECTORY ${HDF5_BINARY_DIR} + COMMAND_ECHO STDOUT + ) + endif () + else () + if (EXISTS "${HDF5_EXAMPLES_COMPRESSED_DIR}/${HDF5_EXAMPLES_COMPRESSED}") + execute_process( + COMMAND ${CMAKE_COMMAND} -E tar xzf ${HDF5_EXAMPLES_COMPRESSED_DIR}/${HDF5_EXAMPLES_COMPRESSED} + WORKING_DIRECTORY ${HDF5_BINARY_DIR} + COMMAND_ECHO STDOUT + ) + endif () endif () + get_filename_component (EX_LAST_EXT ${HDF5_EXAMPLES_COMPRESSED} LAST_EXT) + if (${EX_LAST_EXT} STREQUAL ".zip") + get_filename_component (EX_DIR_NAME ${HDF5_EXAMPLES_COMPRESSED} NAME_WLE) + else () + get_filename_component (EX_DIR_NAME ${HDF5_EXAMPLES_COMPRESSED} NAME_WLE) + get_filename_component (EX_DIR_NAME ${EX_DIR_NAME} NAME_WLE) + endif () + execute_process( + COMMAND ${CMAKE_COMMAND} -E rename ${EX_DIR_NAME} HDF5Examples + WORKING_DIRECTORY ${HDF5_BINARY_DIR} + COMMAND_ECHO STDOUT + ) + install ( + DIRECTORY ${HDF5_BINARY_DIR}/HDF5Examples + DESTINATION ${HDF5_INSTALL_DATA_DIR} + USE_SOURCE_PERMISSIONS + COMPONENT hdfdocuments + ) install ( FILES ${HDF5_SOURCE_DIR}/release_docs/USING_CMake_Examples.txt @@ -165,13 +206,13 @@ if (HDF5_PACK_EXAMPLES) ) install ( FILES - ${HDF_RESOURCES_DIR}/CTestScript.cmake + ${HDF_RESOURCES_DIR}/examples/CTestScript.cmake DESTINATION ${HDF5_INSTALL_DATA_DIR} COMPONENT hdfdocuments ) install ( FILES - ${HDF_RESOURCES_DIR}/HDF5_Examples_options.cmake + ${HDF_RESOURCES_DIR}/examples/HDF5_Examples_options.cmake DESTINATION ${HDF5_INSTALL_DATA_DIR} COMPONENT hdfdocuments ) diff --git a/CMakeLists.txt b/CMakeLists.txt index 785c97b..f61c3a0 100644 --- a/CMakeLists.txt +++ b/CMakeLists.txt @@ -236,9 +236,9 @@ set (HDF5_JAVA_JNI_SRC_DIR ${HDF5_SOURCE_DIR}/java/src/jni) set (HDF5_JAVA_HDF5_SRC_DIR ${HDF5_SOURCE_DIR}/java/src/hdf) set (HDF5_JAVA_TEST_SRC_DIR ${HDF5_SOURCE_DIR}/java/test) set (HDF5_JAVA_LIB_DIR ${HDF5_SOURCE_DIR}/java/lib) -set (HDF5_JAVA_LOGGING_JAR ${HDF5_SOURCE_DIR}/java/lib/slf4j-api-1.7.33.jar) -set (HDF5_JAVA_LOGGING_NOP_JAR ${HDF5_SOURCE_DIR}/java/lib/ext/slf4j-nop-1.7.33.jar) -set (HDF5_JAVA_LOGGING_SIMPLE_JAR ${HDF5_SOURCE_DIR}/java/lib/ext/slf4j-simple-1.7.33.jar) +set (HDF5_JAVA_LOGGING_JAR ${HDF5_SOURCE_DIR}/java/lib/slf4j-api-2.0.6.jar) +set (HDF5_JAVA_LOGGING_NOP_JAR ${HDF5_SOURCE_DIR}/java/lib/ext/slf4j-nop-2.0.6.jar) +set (HDF5_JAVA_LOGGING_SIMPLE_JAR ${HDF5_SOURCE_DIR}/java/lib/ext/slf4j-simple-2.0.6.jar) set (HDF5_DOXYGEN_DIR ${HDF5_SOURCE_DIR}/doxygen) set (HDF5_SRC_INCLUDE_DIRS ${HDF5_SRC_DIR}) @@ -955,11 +955,11 @@ if (BUILD_TESTING) mark_as_advanced (HDF5_TEST_JAVA) if (NOT HDF5_EXTERNALLY_CONFIGURED) - if (EXISTS "${HDF5_SOURCE_DIR}/test" AND IS_DIRECTORY "${HDF5_SOURCE_DIR}/test") + if (EXISTS "${HDF5_TEST_SRC_DIR}" AND IS_DIRECTORY "${HDF5_TEST_SRC_DIR}") add_subdirectory (test) endif () if (H5_HAVE_PARALLEL) - if (EXISTS "${HDF5_SOURCE_DIR}/testpar" AND IS_DIRECTORY "${HDF5_SOURCE_DIR}/testpar") + if (EXISTS "${HDF5_TEST_PAR_DIR}" AND IS_DIRECTORY "${HDF5_TEST_PAR_DIR}") add_subdirectory (testpar) endif () endif () diff --git a/CMakePresets.json b/CMakePresets.json index 13766ca..c72b3b0 100644 --- a/CMakePresets.json +++ b/CMakePresets.json @@ -14,28 +14,35 @@ } }, { - "name": "ci-StdCompression", + "name": "ci-CompressionVars", "hidden": true, - "inherits": "ci-base-tgz", "cacheVariables": { "BUILD_ZLIB_WITH_FETCHCONTENT": "ON", "ZLIB_PACKAGE_NAME": {"type": "STRING", "value": "zlib"}, "ZLIB_TGZ_ORIGPATH": {"type": "STRING", "value": "https://github.com/madler/zlib/releases/download/v1.2.13"}, "ZLIB_TGZ_ORIGNAME": {"type": "STRING", "value": "zlib-1.2.13.tar.gz"}, - "ZLIB_USE_LOCALCONTENT": "OFF", "BUILD_SZIP_WITH_FETCHCONTENT": "ON", "LIBAEC_PACKAGE_NAME": {"type": "STRING", "value": "libaec"}, "LIBAEC_TGZ_ORIGPATH": {"type": "STRING", "value": "https://github.com/MathisRosenhauer/libaec/releases/download/v1.0.6"}, - "LIBAEC_TGZ_ORIGNAME": {"type": "STRING", "value": "libaec-1.0.6.tar.gz"}, - "LIBAEC_USE_LOCALCONTENT": "OFF" + "LIBAEC_TGZ_ORIGNAME": {"type": "STRING", "value": "libaec-1.0.6.tar.gz"} + } + }, + { + "name": "ci-StdCompression", + "hidden": true, + "inherits": ["ci-base-tgz", "ci-CompressionVars"], + "cacheVariables": { + "HDF5_PACKAGE_EXTLIBS": "ON", + "ZLIB_USE_LOCALCONTENT": "OFF", + "LIBAEC_USE_LOCALCONTENT": "OFF", + "HDF5_ENABLE_SZIP_SUPPORT": "ON" } }, { "name": "ci-base-plugins", "hidden": true, - "inherits": "ci-base-tgz", "cacheVariables": { - "PLUGIN_TGZ_NAME": {"type": "STRING", "value": "hdf5_plugins-1.14.0.tar.gz"}, + "PLUGIN_TGZ_NAME": {"type": "STRING", "value": "hdf5_plugins.tar.gz"}, "PLUGIN_PACKAGE_NAME": {"type": "STRING", "value": "pl"}, "BSHUF_TGZ_NAME": {"type": "STRING", "value": "bitshuffle.tar.gz"}, "BSHUF_PACKAGE_NAME": {"type": "STRING", "value": "bshuf"}, @@ -63,32 +70,49 @@ } }, { - "name": "ci-StdPlugins", + "name": "ci-PluginsVars", "hidden": true, - "inherits": ["ci-base-plugins", "ci-base-tgz"], "cacheVariables": { "HDF5_ENABLE_PLUGIN_SUPPORT": "ON", "PLUGIN_TGZ_ORIGPATH": {"type": "STRING", "value": "https://github.com/HDFGroup/hdf5_plugins/archive/refs/tags"}, - "PLUGIN_TGZ_ORIGNAME": {"type": "STRING", "value": "hdf5_plugins-1.14.0.tar.gz"} + "PLUGIN_TGZ_ORIGNAME": {"type": "STRING", "value": "hdf5_plugins-master.tar.gz"} } }, - { - "name": "ci-StdExamples", + { + "name": "ci-StdPlugins", "hidden": true, - "inherits": "ci-base", + "inherits": ["ci-base-plugins", "ci-PluginsVars", "ci-base-tgz"], "cacheVariables": { - "HDF5_PACK_EXAMPLES": "ON", - "HDF5_EXAMPLES_COMPRESSED": {"type": "STRING", "value": "hdf5-examples-2.0.3.tar.gz"}, + "H5PL_VERS_MAJOR": "1", + "H5PL_VERS_MINOR": "10", + "H5PL_VERS_RELEASE": "11" + } + }, + { + "name": "ci-ExamplesVars", + "hidden": true, + "cacheVariables": { + "HDF5_EXAMPLES_COMPRESSED": {"type": "STRING", "value": "hdf5-examples-2.0.4.tar.gz"}, "HDF5_EXAMPLES_COMPRESSED_DIR": {"type": "STRING", "value": "${sourceParentDir}/temp"}, "EXAMPLES_TGZ_ORIGPATH": {"type": "STRING", "value": "https://github.com/HDFGroup/hdf5-examples/archive/refs/tags/"}, - "EXAMPLES_TGZ_ORIGNAME": {"type": "STRING", "value": "2.0.3.tar.gz"}, + "EXAMPLES_TGZ_ORIGNAME": {"type": "STRING", "value": "2.0.4.tar.gz"} + } + }, + { + "name": "ci-StdExamples", + "hidden": true, + "inherits": ["ci-base", "ci-ExamplesVars", "ci-base-tgz"], + "cacheVariables": { + "EXAMPLES_USE_RELEASE_NAME": "ON", + "EXAMPLES_USE_LOCALCONTENT": "OFF", + "HDF5_PACK_EXAMPLES": "ON", "EXAMPLES_DOWNLOAD": "ON" } }, - { + { "name": "ci-StdShar", "hidden": true, - "inherits": "ci-StdCompression", + "inherits": ["ci-StdCompression", "ci-StdExamples"], "cacheVariables": { "HDF_PACKAGE_NAMESPACE": {"type": "STRING", "value": "hdf5::"}, "HDF5_INSTALL_MOD_FORTRAN": "NO", @@ -105,8 +129,7 @@ "ci-x64-Release-MSVC", "ci-CPP", "ci-Java", - "ci-StdShar", - "ci-StdExamples" + "ci-StdShar" ] }, { @@ -117,8 +140,7 @@ "ci-CPP", "ci-Fortran", "ci-Java", - "ci-StdShar", - "ci-StdExamples" + "ci-StdShar" ] }, { @@ -129,8 +151,7 @@ "ci-CPP", "ci-Fortran", "ci-Java", - "ci-StdShar", - "ci-StdExamples" + "ci-StdShar" ] }, { @@ -141,8 +162,7 @@ "ci-CPP", "ci-Fortran", "ci-Java", - "ci-StdShar", - "ci-StdExamples" + "ci-StdShar" ] } ], diff --git a/bin/release b/bin/release index bb0932c..1226d33 100755 --- a/bin/release +++ b/bin/release @@ -206,7 +206,7 @@ tar2cmakezip() cp /mnt/scr1/pre-release/hdf5/CMake/LIBAEC.tar.gz $cmziptmpsubdir cp /mnt/scr1/pre-release/hdf5/CMake/ZLib.tar.gz $cmziptmpsubdir cp /mnt/scr1/pre-release/hdf5/CMake/HDF5Examples-2.0.3-Source.zip $cmziptmpsubdir - cp /mnt/scr1/pre-release/hdf5/CMake/hdf5_plugins-1_10_10.zip $cmziptmpsubdir + cp /mnt/scr1/pre-release/hdf5/CMake/hdf5_plugins-master.zip $cmziptmpsubdir cp $cmziptmpsubdir/$version/config/cmake/scripts/CTestScript.cmake $cmziptmpsubdir cp $cmziptmpsubdir/$version/config/cmake/scripts/HDF5config.cmake $cmziptmpsubdir cp $cmziptmpsubdir/$version/config/cmake/scripts/HDF5options.cmake $cmziptmpsubdir @@ -298,7 +298,7 @@ tar2cmaketgz() cp /mnt/scr1/pre-release/hdf5/CMake/LIBAEC.tar.gz $cmgztmpsubdir cp /mnt/scr1/pre-release/hdf5/CMake/ZLib.tar.gz $cmgztmpsubdir cp /mnt/scr1/pre-release/hdf5/CMake/HDF5Examples-2.0.3-Source.tar.gz $cmgztmpsubdir - cp /mnt/scr1/pre-release/hdf5/CMake/hdf5_plugins-1_10_10.tar.gz $cmgztmpsubdir + cp /mnt/scr1/pre-release/hdf5/CMake/hdf5_plugins-master.tar.gz $cmgztmpsubdir cp $cmgztmpsubdir/$version/config/cmake/scripts/CTestScript.cmake $cmgztmpsubdir cp $cmgztmpsubdir/$version/config/cmake/scripts/HDF5config.cmake $cmgztmpsubdir cp $cmgztmpsubdir/$version/config/cmake/scripts/HDF5options.cmake $cmgztmpsubdir @@ -377,7 +377,7 @@ tar2hpccmaketgz() cp /mnt/scr1/pre-release/hdf5/CMake/LIBAEC.tar.gz $cmgztmpsubdir cp /mnt/scr1/pre-release/hdf5/CMake/ZLib.tar.gz $cmgztmpsubdir cp /mnt/scr1/pre-release/hdf5/CMake/HDF5Examples-2.0.3-Source.tar.gz $cmgztmpsubdir - cp /mnt/scr1/pre-release/hdf5/CMake/hdf5_plugins-1_10_10.tar.gz $cmgztmpsubdir + cp /mnt/scr1/pre-release/hdf5/CMake/hdf5_plugins-master.tar.gz $cmgztmpsubdir cp $cmgztmpsubdir/$version/config/cmake/scripts/CTestScript.cmake $cmgztmpsubdir cp $cmgztmpsubdir/$version/config/cmake/scripts/HDF5config.cmake $cmgztmpsubdir diff --git a/config/cmake-presets/hidden-presets.json b/config/cmake-presets/hidden-presets.json index 18ffdd1..2cd1b14 100644 --- a/config/cmake-presets/hidden-presets.json +++ b/config/cmake-presets/hidden-presets.json @@ -7,8 +7,8 @@ "description": "Basic build using Ninja generator", "generator": "Ninja", "hidden": true, - "binaryDir": "${sourceParentDir}/build/${presetName}", - "installDir": "${sourceParentDir}/install/${presetName}" + "binaryDir": "${sourceParentDir}/build110/${presetName}", + "installDir": "${sourceParentDir}/install110/${presetName}" }, { "name": "ci-x64", diff --git a/config/cmake/cacheinit.cmake b/config/cmake/cacheinit.cmake index 3cae5ab..75723a8 100644 --- a/config/cmake/cacheinit.cmake +++ b/config/cmake/cacheinit.cmake @@ -32,6 +32,10 @@ set_property (CACHE HDF5_INSTALL_MOD_FORTRAN PROPERTY STRINGS NO SHARED STATIC) set (HDF5_BUILD_GENERATORS ON CACHE BOOL "Build Test Generators" FORCE) +set (HDF5_ENABLE_SZIP_SUPPORT ON CACHE BOOL "Use SZip Filter" FORCE) + +set (HDF5_ENABLE_SZIP_ENCODING ON CACHE BOOL "Use SZip Encoding" FORCE) + set (MPIEXEC_MAX_NUMPROCS "4" CACHE STRING "Minimum number of processes for HDF parallel tests" FORCE) set (HDF5_ENABLE_ALL_WARNINGS ON CACHE BOOL "Enable all warnings" FORCE) @@ -69,6 +73,9 @@ set (LIBAEC_USE_LOCALCONTENT ON CACHE BOOL "Use local file for LIBAEC FetchConte set (PLUGIN_TGZ_NAME "hdf5_plugins.tar.gz" CACHE STRING "Use PLUGINS from compressed file" FORCE) set (PLUGIN_PACKAGE_NAME "pl" CACHE STRING "Name of PLUGIN package" FORCE) +set (H5PL_VERS_MAJOR "1" CACHE STRING "Major version of hdf5 package for PLUGIN package" FORCE) +set (H5PL_VERS_MINOR "10" CACHE STRING "Minor version of hdf5 package for PLUGIN package" FORCE) +set (H5PL_VERS_RELEASE "11" CACHE STRING "Release version of hdf5 package for PLUGIN package" FORCE) ############# # bitshuffle diff --git a/config/cmake/CTestScript.cmake b/config/cmake/examples/CTestScript.cmake index dcf2685..76bce56 100644 --- a/config/cmake/CTestScript.cmake +++ b/config/cmake/examples/CTestScript.cmake @@ -35,23 +35,30 @@ if (NOT SITE_OS_NAME) message (STATUS "Dashboard script uname output: ${osname}-${osrel}-${cpu}\n") set (CTEST_BUILD_NAME "${osname}-${osrel}-${cpu}") - if (SITE_BUILDNAME_SUFFIX) - set (CTEST_BUILD_NAME "${SITE_BUILDNAME_SUFFIX}-${CTEST_BUILD_NAME}") - endif () - set (BUILD_OPTIONS "${ADD_BUILD_OPTIONS}") else () ## machine name provided ## -------------------------- if (CMAKE_HOST_UNIX) - set(CTEST_BUILD_NAME "${SITE_OS_NAME}-${SITE_OS_VERSION}-${SITE_OS_BITS}-${SITE_COMPILER_NAME}-${SITE_COMPILER_VERSION}") + set (CTEST_BUILD_NAME "${SITE_OS_NAME}-${SITE_OS_VERSION}-${SITE_OS_BITS}-${SITE_COMPILER_NAME}-${SITE_COMPILER_VERSION}") else () - set(CTEST_BUILD_NAME "${SITE_OS_NAME}-${SITE_OS_VERSION}-${SITE_COMPILER_NAME}") - endif () - if (SITE_BUILDNAME_SUFFIX) - set(CTEST_BUILD_NAME "${CTEST_BUILD_NAME}-${SITE_BUILDNAME_SUFFIX}") + set (CTEST_BUILD_NAME "${SITE_OS_NAME}-${SITE_OS_VERSION}-${SITE_COMPILER_NAME}") endif () - set (BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DSITE:STRING=${CTEST_SITE} -DBUILDNAME:STRING=${CTEST_BUILD_NAME}") endif () +if (SITE_BUILDNAME_SUFFIX) + set (CTEST_BUILD_NAME "${SITE_BUILDNAME_SUFFIX}-${CTEST_BUILD_NAME}") +endif () +set (BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DSITE:STRING=${CTEST_SITE} -DBUILDNAME:STRING=${CTEST_BUILD_NAME}") + +# Launchers work only with Makefile and Ninja generators. +if(NOT "${CTEST_CMAKE_GENERATOR}" MATCHES "Make|Ninja" OR LOCAL_SKIP_TEST) + set(CTEST_USE_LAUNCHERS 0) + set(ENV{CTEST_USE_LAUNCHERS_DEFAULT} 0) + set(BUILD_OPTIONS "${BUILD_OPTIONS} -DCTEST_USE_LAUNCHERS:BOOL=OFF") +else() + set(CTEST_USE_LAUNCHERS 1) + set(ENV{CTEST_USE_LAUNCHERS_DEFAULT} 1) + set(BUILD_OPTIONS "${BUILD_OPTIONS} -DCTEST_USE_LAUNCHERS:BOOL=ON") +endif() #----------------------------------------------------------------------------- # MacOS machines need special options diff --git a/config/cmake/HDF5_Examples.cmake.in b/config/cmake/examples/HDF5_Examples.cmake.in index 9f3db03..da2502c 100644 --- a/config/cmake/HDF5_Examples.cmake.in +++ b/config/cmake/examples/HDF5_Examples.cmake.in @@ -87,7 +87,7 @@ if(WIN32) set(CTEST_BINARY_NAME ${CTEST_SOURCE_NAME}\\build) set(CTEST_SOURCE_DIRECTORY "${CTEST_DASHBOARD_ROOT}\\${CTEST_SOURCE_NAME}") set(CTEST_BINARY_DIRECTORY "${CTEST_DASHBOARD_ROOT}\\${CTEST_BINARY_NAME}") -else(APPLE) +elseif(APPLE) set(ENV{DYLD_LIBRARY_PATH} "${INSTALLDIR}/lib") set(CTEST_BINARY_NAME ${CTEST_SOURCE_NAME}/build) set(CTEST_SOURCE_DIRECTORY "${CTEST_DASHBOARD_ROOT}/${CTEST_SOURCE_NAME}") diff --git a/config/cmake/HDF5_Examples_options.cmake b/config/cmake/examples/HDF5_Examples_options.cmake index cdd49eb..cdd49eb 100755..100644 --- a/config/cmake/HDF5_Examples_options.cmake +++ b/config/cmake/examples/HDF5_Examples_options.cmake diff --git a/java/examples/datasets/CMakeLists.txt b/java/examples/datasets/CMakeLists.txt index 7542e8e..6ed03ca 100644 --- a/java/examples/datasets/CMakeLists.txt +++ b/java/examples/datasets/CMakeLists.txt @@ -80,7 +80,7 @@ endforeach () if (BUILD_TESTING AND HDF5_TEST_EXAMPLES AND HDF5_TEST_SERIAL) get_property (target_name TARGET ${HDF5_JAVA_JNI_LIB_TARGET} PROPERTY OUTPUT_NAME) - set (CMD_ARGS "-Dhdf.hdf5lib.H5.loadLibraryName=${target_name}$<$<OR:$<CONFIG:Debug>,$<CONFIG:Developer>>:${CMAKE_DEBUG_POSTFIX}>;") + set (CMD_ARGS "-Dhdf.hdf5lib.H5.loadLibraryName=${target_name}$<$<CONFIG:Debug>:${CMAKE_DEBUG_POSTFIX}>;") set (last_test "") foreach (example ${HDF_JAVA_EXAMPLES}) diff --git a/java/examples/datasets/JavaDatasetExample.sh.in b/java/examples/datasets/JavaDatasetExample.sh.in index b299ff2..9683076 100644 --- a/java/examples/datasets/JavaDatasetExample.sh.in +++ b/java/examples/datasets/JavaDatasetExample.sh.in @@ -58,8 +58,8 @@ $top_builddir/java/src/jni/.libs/libhdf5_java.* $top_builddir/java/src/$JARFILE " LIST_JAR_TESTFILES=" -$HDFLIB_HOME/slf4j-api-1.7.33.jar -$HDFLIB_HOME/ext/slf4j-simple-1.7.33.jar +$HDFLIB_HOME/slf4j-api-2.0.6.jar +$HDFLIB_HOME/ext/slf4j-simple-2.0.6.jar " LIST_DATA_FILES=" $HDFTEST_HOME/../testfiles/examples.datasets.H5Ex_D_Alloc.txt @@ -222,7 +222,7 @@ JAVAEXEFLAGS=@H5_JAVAFLAGS@ COPY_LIBFILES_TO_BLDLIBDIR COPY_DATAFILES_TO_BLDDIR -CPATH=".:"$BLDLIBDIR"/"$JARFILE":"$BLDLIBDIR"/slf4j-api-1.7.33.jar:"$BLDLIBDIR"/slf4j-simple-1.7.33.jar:"$TESTJARFILE"" +CPATH=".:"$BLDLIBDIR"/"$JARFILE":"$BLDLIBDIR"/slf4j-api-2.0.6.jar:"$BLDLIBDIR"/slf4j-simple-2.0.6.jar:"$TESTJARFILE"" TEST=/usr/bin/test if [ ! -x /usr/bin/test ] diff --git a/java/examples/datasets/Makefile.am b/java/examples/datasets/Makefile.am index 8b71ced..d4bb666 100644 --- a/java/examples/datasets/Makefile.am +++ b/java/examples/datasets/Makefile.am @@ -27,7 +27,7 @@ classes: pkgpath = examples/datasets hdfjarfile = jar$(PACKAGE_TARNAME)-$(PACKAGE_VERSION).jar -CLASSPATH_ENV=CLASSPATH=.:$(JAVAROOT):$(top_builddir)/java/src/$(hdfjarfile):$(top_srcdir)/java/lib/slf4j-api-1.7.33.jar:$(top_srcdir)/java/lib/ext/slf4j-simple-1.7.33.jar:$$CLASSPATH +CLASSPATH_ENV=CLASSPATH=.:$(JAVAROOT):$(top_builddir)/java/src/$(hdfjarfile):$(top_srcdir)/java/lib/slf4j-api-2.0.6.jar:$(top_srcdir)/java/lib/ext/slf4j-simple-2.0.6.jar:$$CLASSPATH jarfile = jar$(PACKAGE_TARNAME)datasets.jar diff --git a/java/examples/datatypes/JavaDatatypeExample.sh.in b/java/examples/datatypes/JavaDatatypeExample.sh.in index a82d883..fc4a627 100644 --- a/java/examples/datatypes/JavaDatatypeExample.sh.in +++ b/java/examples/datatypes/JavaDatatypeExample.sh.in @@ -55,8 +55,8 @@ $top_builddir/java/src/jni/.libs/libhdf5_java.* $top_builddir/java/src/$JARFILE " LIST_JAR_TESTFILES=" -$HDFLIB_HOME/slf4j-api-1.7.33.jar -$HDFLIB_HOME/ext/slf4j-simple-1.7.33.jar +$HDFLIB_HOME/slf4j-api-2.0.6.jar +$HDFLIB_HOME/ext/slf4j-simple-2.0.6.jar " LIST_DATA_FILES=" $HDFTEST_HOME/../testfiles/examples.datatypes.H5Ex_T_Array.txt @@ -218,7 +218,7 @@ JAVAEXEFLAGS=@H5_JAVAFLAGS@ COPY_LIBFILES_TO_BLDLIBDIR COPY_DATAFILES_TO_BLDDIR -CPATH=".:"$BLDLIBDIR"/"$JARFILE":"$BLDLIBDIR"/slf4j-api-1.7.33.jar:"$BLDLIBDIR"/slf4j-simple-1.7.33.jar:"$TESTJARFILE"" +CPATH=".:"$BLDLIBDIR"/"$JARFILE":"$BLDLIBDIR"/slf4j-api-2.0.6.jar:"$BLDLIBDIR"/slf4j-simple-2.0.6.jar:"$TESTJARFILE"" TEST=/usr/bin/test if [ ! -x /usr/bin/test ] diff --git a/java/examples/datatypes/Makefile.am b/java/examples/datatypes/Makefile.am index 55ff91f..12e5cb8 100644 --- a/java/examples/datatypes/Makefile.am +++ b/java/examples/datatypes/Makefile.am @@ -27,7 +27,7 @@ classes: pkgpath = examples/datatypes hdfjarfile = jar$(PACKAGE_TARNAME)-$(PACKAGE_VERSION).jar -CLASSPATH_ENV=CLASSPATH=.:$(JAVAROOT):$(top_builddir)/java/src/$(hdfjarfile):$(top_srcdir)/java/lib/slf4j-api-1.7.33.jar:$(top_srcdir)/java/lib/ext/slf4j-simple-1.7.33.jar:$$CLASSPATH +CLASSPATH_ENV=CLASSPATH=.:$(JAVAROOT):$(top_builddir)/java/src/$(hdfjarfile):$(top_srcdir)/java/lib/slf4j-api-2.0.6.jar:$(top_srcdir)/java/lib/ext/slf4j-simple-2.0.6.jar:$$CLASSPATH jarfile = jar$(PACKAGE_TARNAME)datatypes.jar diff --git a/java/examples/groups/JavaGroupExample.sh.in b/java/examples/groups/JavaGroupExample.sh.in index 1b84ed3..4773579 100644 --- a/java/examples/groups/JavaGroupExample.sh.in +++ b/java/examples/groups/JavaGroupExample.sh.in @@ -57,8 +57,8 @@ $top_builddir/java/src/jni/.libs/libhdf5_java.* $top_builddir/java/src/$JARFILE " LIST_JAR_TESTFILES=" -$HDFLIB_HOME/slf4j-api-1.7.33.jar -$HDFLIB_HOME/ext/slf4j-simple-1.7.33.jar +$HDFLIB_HOME/slf4j-api-2.0.6.jar +$HDFLIB_HOME/ext/slf4j-simple-2.0.6.jar " LIST_ITER_FILES=" $HDFTEST_HOME/h5ex_g_iterate.h5 @@ -257,7 +257,7 @@ COPY_LIBFILES_TO_BLDLIBDIR COPY_DATAFILES_TO_BLDDIR COPY_ITERFILES_TO_BLDITERDIR -CPATH=".:"$BLDLIBDIR"/"$JARFILE":"$BLDLIBDIR"/slf4j-api-1.7.33.jar:"$BLDLIBDIR"/slf4j-simple-1.7.33.jar:"$TESTJARFILE"" +CPATH=".:"$BLDLIBDIR"/"$JARFILE":"$BLDLIBDIR"/slf4j-api-2.0.6.jar:"$BLDLIBDIR"/slf4j-simple-2.0.6.jar:"$TESTJARFILE"" TEST=/usr/bin/test if [ ! -x /usr/bin/test ] diff --git a/java/examples/groups/Makefile.am b/java/examples/groups/Makefile.am index c520860..a3fb774 100644 --- a/java/examples/groups/Makefile.am +++ b/java/examples/groups/Makefile.am @@ -27,7 +27,7 @@ classes: pkgpath = examples/groups hdfjarfile = jar$(PACKAGE_TARNAME)-$(PACKAGE_VERSION).jar -CLASSPATH_ENV=CLASSPATH=.:$(JAVAROOT):$(top_builddir)/java/src/$(hdfjarfile):$(top_srcdir)/java/lib/slf4j-api-1.7.33.jar:$(top_srcdir)/java/lib/ext/slf4j-simple-1.7.33.jar:$$CLASSPATH +CLASSPATH_ENV=CLASSPATH=.:$(JAVAROOT):$(top_builddir)/java/src/$(hdfjarfile):$(top_srcdir)/java/lib/slf4j-api-2.0.6.jar:$(top_srcdir)/java/lib/ext/slf4j-simple-2.0.6.jar:$$CLASSPATH jarfile = jar$(PACKAGE_TARNAME)groups.jar diff --git a/java/examples/intro/JavaIntroExample.sh.in b/java/examples/intro/JavaIntroExample.sh.in index 41ed694..56b6e57 100644 --- a/java/examples/intro/JavaIntroExample.sh.in +++ b/java/examples/intro/JavaIntroExample.sh.in @@ -55,8 +55,8 @@ $top_builddir/java/src/jni/.libs/libhdf5_java.* $top_builddir/java/src/$JARFILE " LIST_JAR_TESTFILES=" -$HDFLIB_HOME/slf4j-api-1.7.33.jar -$HDFLIB_HOME/ext/slf4j-simple-1.7.33.jar +$HDFLIB_HOME/slf4j-api-2.0.6.jar +$HDFLIB_HOME/ext/slf4j-simple-2.0.6.jar " LIST_DATA_FILES=" $HDFTEST_HOME/../testfiles/examples.intro.H5_CreateDataset.txt @@ -207,7 +207,7 @@ JAVAEXEFLAGS=@H5_JAVAFLAGS@ COPY_LIBFILES_TO_BLDLIBDIR COPY_DATAFILES_TO_BLDDIR -CPATH=".:"$BLDLIBDIR"/"$JARFILE":"$BLDLIBDIR"/slf4j-api-1.7.33.jar:"$BLDLIBDIR"/slf4j-simple-1.7.33.jar:"$TESTJARFILE"" +CPATH=".:"$BLDLIBDIR"/"$JARFILE":"$BLDLIBDIR"/slf4j-api-2.0.6.jar:"$BLDLIBDIR"/slf4j-simple-2.0.6.jar:"$TESTJARFILE"" TEST=/usr/bin/test if [ ! -x /usr/bin/test ] diff --git a/java/examples/intro/Makefile.am b/java/examples/intro/Makefile.am index 741f122..b6d6a1f 100644 --- a/java/examples/intro/Makefile.am +++ b/java/examples/intro/Makefile.am @@ -27,7 +27,7 @@ classes: pkgpath = examples/intro hdfjarfile = jar$(PACKAGE_TARNAME)-$(PACKAGE_VERSION).jar -CLASSPATH_ENV=CLASSPATH=.:$(JAVAROOT):$(top_builddir)/java/src/$(hdfjarfile):$(top_srcdir)/java/lib/slf4j-api-1.7.33.jar:$(top_srcdir)/java/lib/ext/slf4j-simple-1.7.33.jar:$$CLASSPATH +CLASSPATH_ENV=CLASSPATH=.:$(JAVAROOT):$(top_builddir)/java/src/$(hdfjarfile):$(top_srcdir)/java/lib/slf4j-api-2.0.6.jar:$(top_srcdir)/java/lib/ext/slf4j-simple-2.0.6.jar:$$CLASSPATH jarfile = jar$(PACKAGE_TARNAME)intro.jar diff --git a/java/lib/ext/slf4j-nop-1.7.33.jar b/java/lib/ext/slf4j-nop-1.7.33.jar Binary files differdeleted file mode 100644 index aa8fc09..0000000 --- a/java/lib/ext/slf4j-nop-1.7.33.jar +++ /dev/null diff --git a/java/lib/ext/slf4j-nop-2.0.6.jar b/java/lib/ext/slf4j-nop-2.0.6.jar Binary files differnew file mode 100644 index 0000000..27740a5 --- /dev/null +++ b/java/lib/ext/slf4j-nop-2.0.6.jar diff --git a/java/lib/ext/slf4j-simple-1.7.33.jar b/java/lib/ext/slf4j-simple-1.7.33.jar Binary files differdeleted file mode 100644 index ebf4846..0000000 --- a/java/lib/ext/slf4j-simple-1.7.33.jar +++ /dev/null diff --git a/java/lib/ext/slf4j-simple-2.0.6.jar b/java/lib/ext/slf4j-simple-2.0.6.jar Binary files differnew file mode 100644 index 0000000..f8913c0 --- /dev/null +++ b/java/lib/ext/slf4j-simple-2.0.6.jar diff --git a/java/lib/slf4j-api-1.7.33.jar b/java/lib/slf4j-api-1.7.33.jar Binary files differdeleted file mode 100644 index db3730d..0000000 --- a/java/lib/slf4j-api-1.7.33.jar +++ /dev/null diff --git a/java/lib/slf4j-api-2.0.6.jar b/java/lib/slf4j-api-2.0.6.jar Binary files differnew file mode 100644 index 0000000..a2cb802 --- /dev/null +++ b/java/lib/slf4j-api-2.0.6.jar diff --git a/java/src/Makefile.am b/java/src/Makefile.am index 8820fd8..b36f8a1 100644 --- a/java/src/Makefile.am +++ b/java/src/Makefile.am @@ -36,7 +36,7 @@ jarfile = jar$(PACKAGE_TARNAME)-$(PACKAGE_VERSION).jar hdf5_javadir = $(libdir) pkgpath = hdf/hdf5lib -CLASSPATH_ENV=CLASSPATH=.:$(top_srcdir)/java/lib/slf4j-api-1.7.33.jar:$$CLASSPATH +CLASSPATH_ENV=CLASSPATH=.:$(top_srcdir)/java/lib/slf4j-api-2.0.6.jar:$$CLASSPATH AM_JAVACFLAGS = $(H5_JAVACFLAGS) -deprecation @@ -109,26 +109,22 @@ hdf5_java_JAVA = \ ${pkgpath}/HDFArray.java \ ${pkgpath}/HDFNativeData.java -$(jarfile): classhdf5_java.stamp classes docs +$(jarfile): classhdf5_java.stamp classes $(JAR) cvf $@ -C $(JAVAROOT)/ $(pkgpath) hdf5_java_DATA = $(jarfile) -.PHONY: docs classes +.PHONY: classes WINDOWTITLE = 'HDF5 Java' DOCTITLE = '<h1>HDF5 Java Wrapper</h1>' SRCDIR = '$(pkgpath)' -docs: - $(JAVADOC) -sourcepath $(srcdir) -d javadoc -Xdoclint:none -use -splitIndex -windowtitle $(WINDOWTITLE) -doctitle $(DOCTITLE) -J-Xmx180m -verbose -overview $(top_srcdir)/java/src/hdf/overview.html -classpath $(CLASSPATH_ENV) hdf.hdf5lib - CLEANFILES = classhdf5_java.stamp $(jarfile) $(JAVAROOT)/$(pkgpath)/callbacks/*.class $(JAVAROOT)/$(pkgpath)/exceptions/*.class $(JAVAROOT)/$(pkgpath)/structs/*.class $(JAVAROOT)/$(pkgpath)/*.class clean: rm -rf $(JAVAROOT)/* rm -f $(jarfile) - rm -rf javadoc rm -f classhdf5_java.stamp diff --git a/java/src/hdf/hdf5lib/H5.java b/java/src/hdf/hdf5lib/H5.java index 601dc3f..dc0df5a 100644 --- a/java/src/hdf/hdf5lib/H5.java +++ b/java/src/hdf/hdf5lib/H5.java @@ -55,6 +55,9 @@ import hdf.hdf5lib.structs.H5G_info_t; import hdf.hdf5lib.structs.H5L_info_t; import hdf.hdf5lib.structs.H5O_info_t; +import org.slf4j.Logger; +import org.slf4j.LoggerFactory; + /** * @page HDF5LIB HDF5 Java API Package * This class is the Java interface for the HDF5 library. @@ -255,7 +258,7 @@ public class H5 implements java.io.Serializable { */ private static final long serialVersionUID = 6129888282117053288L; - private final static org.slf4j.Logger log = org.slf4j.LoggerFactory.getLogger(H5.class); + private final static Logger log = LoggerFactory.getLogger(H5.class); /** * @ingroup JH5 diff --git a/java/src/jni/CMakeLists.txt b/java/src/jni/CMakeLists.txt index 56a1ab8..1436092 100644 --- a/java/src/jni/CMakeLists.txt +++ b/java/src/jni/CMakeLists.txt @@ -104,7 +104,7 @@ if (HDF5_EXPORTED_TARGETS) ${HDF5_EXPORTED_TARGETS} LIBRARY DESTINATION ${HDF5_INSTALL_LIB_DIR} COMPONENT libraries ARCHIVE DESTINATION ${HDF5_INSTALL_LIB_DIR} COMPONENT libraries - RUNTIME DESTINATION ${HDF5_INSTALL_LIB_DIR} COMPONENT libraries + RUNTIME DESTINATION ${HDF5_INSTALL_BIN_DIR} COMPONENT libraries FRAMEWORK DESTINATION ${HDF5_INSTALL_FWRK_DIR} COMPONENT libraries INCLUDES DESTINATION include ) diff --git a/java/test/Makefile.am b/java/test/Makefile.am index a18ed93..f9f0ab8 100644 --- a/java/test/Makefile.am +++ b/java/test/Makefile.am @@ -27,7 +27,7 @@ classes: pkgpath = test hdfjarfile = jar$(PACKAGE_TARNAME)-$(PACKAGE_VERSION).jar -CLASSPATH_ENV=CLASSPATH=.:$(JAVAROOT):$(top_builddir)/java/src/$(hdfjarfile):$(top_srcdir)/java/lib/junit.jar:$(top_srcdir)/java/lib/hamcrest-core.jar:$(top_srcdir)/java/lib/slf4j-api-1.7.33.jar:$(top_srcdir)/java/lib/ext/slf4j-simple-1.7.33.jar:$$CLASSPATH +CLASSPATH_ENV=CLASSPATH=.:$(JAVAROOT):$(top_builddir)/java/src/$(hdfjarfile):$(top_srcdir)/java/lib/junit.jar:$(top_srcdir)/java/lib/hamcrest-core.jar:$(top_srcdir)/java/lib/slf4j-api-2.0.6.jar:$(top_srcdir)/java/lib/ext/slf4j-simple-2.0.6.jar:$$CLASSPATH jarfile = jar$(PACKAGE_TARNAME)test.jar diff --git a/java/test/junit.sh.in b/java/test/junit.sh.in index 9f5334c..a407c5c 100644 --- a/java/test/junit.sh.in +++ b/java/test/junit.sh.in @@ -67,8 +67,8 @@ $top_builddir/java/src/jni/.libs/libhdf5_java.* LIST_JAR_TESTFILES=" $HDFLIB_HOME/hamcrest-core.jar $HDFLIB_HOME/junit.jar -$HDFLIB_HOME/slf4j-api-1.7.33.jar -$HDFLIB_HOME/ext/slf4j-simple-1.7.33.jar +$HDFLIB_HOME/slf4j-api-2.0.6.jar +$HDFLIB_HOME/ext/slf4j-simple-2.0.6.jar " LIST_JAR_FILES=" $top_builddir/java/src/$JARFILE @@ -299,7 +299,7 @@ JAVAEXEFLAGS=@H5_JAVAFLAGS@ COPY_LIBFILES_TO_BLDLIBDIR COPY_DATAFILES_TO_BLDDIR -CPATH=".:"$BLDLIBDIR"/"$JARFILE":"$BLDLIBDIR"/junit.jar:"$BLDLIBDIR"/hamcrest-core.jar:"$BLDLIBDIR"/slf4j-api-1.7.33.jar:"$BLDLIBDIR"/slf4j-simple-1.7.33.jar:"$TESTJARFILE"" +CPATH=".:"$BLDLIBDIR"/"$JARFILE":"$BLDLIBDIR"/junit.jar:"$BLDLIBDIR"/hamcrest-core.jar:"$BLDLIBDIR"/slf4j-api-2.0.6.jar:"$BLDLIBDIR"/slf4j-simple-2.0.6.jar:"$TESTJARFILE"" TEST=/usr/bin/test if [ ! -x /usr/bin/test ] |