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authorQuincey Koziol <koziol@hdfgroup.org>2002-04-02 21:21:13 (GMT)
committerQuincey Koziol <koziol@hdfgroup.org>2002-04-02 21:21:13 (GMT)
commit8005e831a03dcceec4b3333b5c5483a4cea3707c (patch)
tree56d38aa6109b69870f8283d9589cc5982dd02719
parentd2232a345f36988f4a60034d63ddca25c476fc08 (diff)
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[svn-r5131] Purpose:
Code cleanup Description: The function pointer for doing parallel I/O was being set in the H5D_read and H5D_write routines instead of in H5S_conv, where it belongs. Solution: Added an extra 'flags' parameter to H5S_find to allow the function to determine when to set the MPIO functions instead of the regular optimized I/O routines and get rid of code messing with the function pointer in the H5D routines. Platforms tested: IRIX64 6.5 (modi4)
-rw-r--r--src/H5D.c71
-rw-r--r--src/H5S.c28
-rw-r--r--src/H5Sprivate.h6
3 files changed, 57 insertions, 48 deletions
diff --git a/src/H5D.c b/src/H5D.c
index 6878c95..acfd055 100644
--- a/src/H5D.c
+++ b/src/H5D.c
@@ -23,7 +23,7 @@
#include "H5MMprivate.h" /* Memory management */
#include "H5Oprivate.h" /* Object headers */
#include "H5Pprivate.h" /* Property lists */
-#include "H5Sprivate.h" /* Dataspace functions rky 980813 */
+#include "H5Sprivate.h" /* Dataspace functions */
#include "H5Vprivate.h" /* Vector and array functions */
#include "H5Zprivate.h" /* Data filters */
@@ -2009,7 +2009,7 @@ H5D_read(H5D_t *dataset, const H5T_t *mem_type, const H5S_t *mem_space,
H5O_fill_t fill;
H5P_genplist_t *dx_plist=NULL; /* Property list */
H5P_genplist_t *dc_plist; /* Property list */
-
+ unsigned sconv_flags=0; /* Flags for the space conversion */
FUNC_ENTER(H5D_read, FAIL);
@@ -2052,9 +2052,18 @@ H5D_read(H5D_t *dataset, const H5T_t *mem_type, const H5S_t *mem_space,
HGOTO_ERROR (H5E_DATASET, H5E_CANTINIT, FAIL, "unable to retrieve data xfer info");
} /* end if */
/* Collective access is not permissible without the MPIO driver */
- if (doing_mpio && xfer_mode==H5FD_MPIO_COLLECTIVE &&
- !(IS_H5FD_MPIO(dataset->ent.file)))
+ if (doing_mpio && xfer_mode==H5FD_MPIO_COLLECTIVE && !(IS_H5FD_MPIO(dataset->ent.file)))
HGOTO_ERROR (H5E_DATASET, H5E_UNSUPPORTED, FAIL, "collective access for MPIO driver only");
+
+ /* Set the "parallel I/O possible" flag, for H5S_find() */
+ if (H5_mpi_opt_types_g && IS_H5FD_MPIO(dataset->ent.file)) {
+ /* Only collective write should call this since it eventually
+ * calls MPI_File_set_view which is a collective call.
+ * See H5S_mpio_spaces_xfer() for details.
+ */
+ if (doing_mpio && xfer_mode==H5FD_MPIO_COLLECTIVE)
+ sconv_flags |= H5S_CONV_PAR_IO_POSSIBLE;
+ } /* end if */
#endif
#ifdef QAK
@@ -2081,26 +2090,9 @@ printf("%s: check 1.0, nelmts=%d, H5S_get_select_npoints(file_space)=%d\n",FUNC,
} /* end if */
/* Get dataspace functions */
- if (NULL==(sconv=H5S_find(mem_space, file_space)))
+ if (NULL==(sconv=H5S_find(mem_space, file_space, sconv_flags)))
HGOTO_ERROR (H5E_DATASET, H5E_UNSUPPORTED, FAIL, "unable to convert from file to memory data space");
-#ifdef H5_HAVE_PARALLEL
- /* rky 980813 This is a temporary KLUGE.
- * The sconv functions should be set by H5S_find,
- * or we should use a different way to call the MPI-IO
- * mem-and-file-dataspace-xfer functions
- * (the latter in case the arguments to sconv_funcs
- * turn out to be inappropriate for MPI-IO). */
- if (H5_mpi_opt_types_g && IS_H5FD_MPIO(dataset->ent.file)) {
- /* Only collective write should call this since it eventually
- * calls MPI_File_set_view which is a collective call.
- * See H5S_mpio_spaces_xfer() for details.
- */
- if (doing_mpio && xfer_mode==H5FD_MPIO_COLLECTIVE)
- sconv->read = H5S_mpio_spaces_read;
- } /* end if */
-#endif /*H5_HAVE_PARALLEL*/
-
#ifdef QAK
printf("%s: check 1.1, \n",FUNC);
#endif /* QAK */
@@ -2472,6 +2464,7 @@ H5D_write(H5D_t *dataset, const H5T_t *mem_type, const H5S_t *mem_space,
H5O_fill_t fill;
H5P_genplist_t *dx_plist=NULL; /* Property list */
H5P_genplist_t *dc_plist; /* Property list */
+ unsigned sconv_flags=0; /* Flags for the space conversion */
FUNC_ENTER(H5D_write, FAIL);
@@ -2540,7 +2533,17 @@ H5D_write(H5D_t *dataset, const H5T_t *mem_type, const H5S_t *mem_space,
if (doing_mpio && xfer_mode==H5FD_MPIO_COLLECTIVE &&
!(IS_H5FD_MPIO(dataset->ent.file)))
HGOTO_ERROR (H5E_DATASET, H5E_UNSUPPORTED, FAIL, "collective access for MPIO driver only");
-#endif
+
+ /* Set the "parallel I/O possible" flag, for H5S_find() */
+ if (H5_mpi_opt_types_g && IS_H5FD_MPIO(dataset->ent.file)) {
+ /* Only collective write should call this since it eventually
+ * calls MPI_File_set_view which is a collective call.
+ * See H5S_mpio_spaces_xfer() for details.
+ */
+ if (doing_mpio && xfer_mode==H5FD_MPIO_COLLECTIVE)
+ sconv_flags |= H5S_CONV_PAR_IO_POSSIBLE;
+ } /* end if */
+#endif /*H5_HAVE_PARALLEL*/
#ifdef QAK
printf("%s: check 0.5, nelmts=%d, mem_space->rank=%d\n", FUNC, (int)nelmts, mem_space->extent.u.simple.rank);
@@ -2569,27 +2572,9 @@ H5D_write(H5D_t *dataset, const H5T_t *mem_type, const H5S_t *mem_space,
#endif /* QAK */
/* Get dataspace functions */
- if (NULL==(sconv=H5S_find(mem_space, file_space)))
+ if (NULL==(sconv=H5S_find(mem_space, file_space, sconv_flags)))
HGOTO_ERROR (H5E_DATASET, H5E_UNSUPPORTED, FAIL, "unable to convert from memory to file data space");
-#ifdef H5_HAVE_PARALLEL
- /* rky 980813 This is a temporary KLUGE.
- * The sconv functions should be set by H5S_find,
- * or we should use a different way to call the MPI-IO
- * mem-and-file-dataspace-xfer functions
- * (the latter in case the arguments to sconv_funcs
- * turn out to be inappropriate for MPI-IO). */
- if (H5_mpi_opt_types_g &&
- IS_H5FD_MPIO(dataset->ent.file)) {
- /* Only collective write should call this since it eventually
- * calls MPI_File_set_view which is a collective call.
- * See H5S_mpio_spaces_xfer() for details.
- */
- if (doing_mpio && xfer_mode==H5FD_MPIO_COLLECTIVE)
- sconv->write = H5S_mpio_spaces_write;
- } /* end if */
-#endif /*H5_HAVE_PARALLEL*/
-
/*
* If there is no type conversion then try writing directly from
* application buffer to file.
@@ -3800,5 +3785,3 @@ herr_t H5D_update_chunk( H5D_t *dset )
}
-
-
diff --git a/src/H5S.c b/src/H5S.c
index 43547db..16ff07d 100644
--- a/src/H5S.c
+++ b/src/H5S.c
@@ -1494,7 +1494,7 @@ H5S_set_extent_simple (H5S_t *space, unsigned rank, const hsize_t *dims,
*-------------------------------------------------------------------------
*/
H5S_conv_t *
-H5S_find (const H5S_t *mem_space, const H5S_t *file_space)
+H5S_find (const H5S_t *mem_space, const H5S_t *file_space, unsigned flags)
{
H5S_conv_t *path; /* Space conversion path */
htri_t c1,c2; /* Flags whether a selection is contiguous */
@@ -1531,8 +1531,19 @@ H5S_find (const H5S_t *mem_space, const H5S_t *file_space)
HRETURN_ERROR(H5E_DATASPACE, H5E_BADRANGE, NULL, "invalid check for contiguous dataspace ");
if (c1==TRUE && c2==TRUE) {
+#ifdef H5_HAVE_PARALLEL
+ if(flags&H5S_CONV_PAR_IO_POSSIBLE) {
+ H5S_conv_g[i]->read = H5S_mpio_spaces_read;
+ H5S_conv_g[i]->write = H5S_mpio_spaces_write;
+ } /* end if */
+ else {
+ H5S_conv_g[i]->read = H5S_all_read;
+ H5S_conv_g[i]->write = H5S_all_write;
+ } /* end else */
+#else /* H5_HAVE_PARALLEL */
H5S_conv_g[i]->read = H5S_all_read;
H5S_conv_g[i]->write = H5S_all_write;
+#endif /* H5_HAVE_PARALLEL */
}
else {
H5S_conv_g[i]->read = NULL;
@@ -1569,8 +1580,19 @@ H5S_find (const H5S_t *mem_space, const H5S_t *file_space)
HRETURN_ERROR(H5E_DATASPACE, H5E_BADRANGE, NULL, "invalid check for contiguous dataspace ");
if (c1==TRUE && c2==TRUE) {
- path->read = H5S_all_read;
- path->write = H5S_all_write;
+#ifdef H5_HAVE_PARALLEL
+ if(flags&H5S_CONV_PAR_IO_POSSIBLE) {
+ H5S_conv_g[i]->read = H5S_mpio_spaces_read;
+ H5S_conv_g[i]->write = H5S_mpio_spaces_write;
+ } /* end if */
+ else {
+ H5S_conv_g[i]->read = H5S_all_read;
+ H5S_conv_g[i]->write = H5S_all_write;
+ } /* end else */
+#else /* H5_HAVE_PARALLEL */
+ H5S_conv_g[i]->read = H5S_all_read;
+ H5S_conv_g[i]->write = H5S_all_write;
+#endif /* H5_HAVE_PARALLEL */
} /* end if */
/*
diff --git a/src/H5Sprivate.h b/src/H5Sprivate.h
index 86a46bc..713d52f 100644
--- a/src/H5Sprivate.h
+++ b/src/H5Sprivate.h
@@ -30,6 +30,9 @@
#define H5S_VALID_MAX 0x01
#define H5S_VALID_PERM 0x02
+/* Flags for H5S_find */
+#define H5S_CONV_PAR_IO_POSSIBLE 0x0001
+
/* Forward references of common typedefs */
typedef struct H5S_t H5S_t;
typedef struct H5S_pnt_node_t H5S_pnt_node_t;
@@ -192,7 +195,8 @@ __DLLVAR__ const H5S_mconv_t H5S_HYPER_MCONV[];
__DLL__ H5S_t *H5S_create(H5S_class_t type);
__DLL__ H5S_t *H5S_copy(const H5S_t *src);
__DLL__ herr_t H5S_close(H5S_t *ds);
-__DLL__ H5S_conv_t *H5S_find(const H5S_t *mem_space, const H5S_t *file_space);
+__DLL__ H5S_conv_t *H5S_find(const H5S_t *mem_space, const H5S_t *file_space,
+ unsigned flags);
__DLL__ H5S_class_t H5S_get_simple_extent_type(const H5S_t *ds);
__DLL__ hssize_t H5S_get_simple_extent_npoints(const H5S_t *ds);
__DLL__ hsize_t H5S_get_npoints_max(const H5S_t *ds);