[svn-r21517] - Added checks for clock_gettime() to configure.in.

Tested on Linux, FreeBSD, Solaris, MacOSX to ensure they are found correctly and everything builds.  No code currently relys on clock_gettime().

- Brought Windows and VMS H5pubconf.h files into sync with the Linux file.

Tested on Windows.  Ray will test on VMS when this is pushed to the 1.8.x branch.

5 files changed, 325 insertions, 115 deletions

diff --git a/configure b/configure
index f2219ae..c476921 100755
--- a/configure
+++ b/configure
@@ -1,5 +1,5 @@
 #! /bin/sh
-# From configure.in Id: configure.in 21443 2011-10-02 14:35:04Z hdftest .
+# From configure.in Id: configure.in 21499 2011-10-09 14:02:51Z hdftest .
 # Guess values for system-dependent variables and create Makefiles.
 # Generated by GNU Autoconf 2.68 for HDF5 1.9.95.
 #
@@ -2685,21 +2685,23 @@ rm -f conftest.val
 
 } # ac_fn_c_compute_int
 
-# ac_fn_c_check_member LINENO AGGR MEMBER VAR INCLUDES
-# ----------------------------------------------------
-# Tries to find if the field MEMBER exists in type AGGR, after including
-# INCLUDES, setting cache variable VAR accordingly.
-ac_fn_c_check_member ()
+# ac_fn_c_check_decl LINENO SYMBOL VAR INCLUDES
+# ---------------------------------------------
+# Tests whether SYMBOL is declared in INCLUDES, setting cache variable VAR
+# accordingly.
+ac_fn_c_check_decl ()
 {
   as_lineno=${as_lineno-"$1"} as_lineno_stack=as_lineno_stack=$as_lineno_stack
-  { $as_echo "$as_me:${as_lineno-$LINENO}: checking for $2.$3" >&5
-$as_echo_n "checking for $2.$3... " >&6; }
-if eval \${$4+:} false; then :
+  as_decl_name=`echo $2|sed 's/ *(.*//'`
+  as_decl_use=`echo $2|sed -e 's/(/((/' -e 's/)/) 0&/' -e 's/,/) 0& (/g'`
+  { $as_echo "$as_me:${as_lineno-$LINENO}: checking whether $as_decl_name is declared" >&5
+$as_echo_n "checking whether $as_decl_name is declared... " >&6; }
+if eval \${$3+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   cat confdefs.h - <<_ACEOF >conftest.$ac_ext
 /* end confdefs.h.  */
-$5
+$4
 #ifdef FC_DUMMY_MAIN
 #ifndef FC_DUMMY_MAIN_EQ_F77
 #  ifdef __cplusplus
@@ -2711,15 +2713,43 @@ $5
 int
 main ()
 {
-static $2 ac_aggr;
-if (ac_aggr.$3)
-return 0;
+#ifndef $as_decl_name
+#ifdef __cplusplus
+  (void) $as_decl_use;
+#else
+  (void) $as_decl_name;
+#endif
+#endif
+
   ;
   return 0;
 }
 _ACEOF
 if ac_fn_c_try_compile "$LINENO"; then :
-  eval "$4=yes"
+  eval "$3=yes"
+else
+  eval "$3=no"
+fi
+rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
+fi
+eval ac_res=\$$3
+	       { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_res" >&5
+$as_echo "$ac_res" >&6; }
+  eval $as_lineno_stack; ${as_lineno_stack:+:} unset as_lineno
+
+} # ac_fn_c_check_decl
+
+# ac_fn_c_check_member LINENO AGGR MEMBER VAR INCLUDES
+# ----------------------------------------------------
+# Tries to find if the field MEMBER exists in type AGGR, after including
+# INCLUDES, setting cache variable VAR accordingly.
+ac_fn_c_check_member ()
+{
+  as_lineno=${as_lineno-"$1"} as_lineno_stack=as_lineno_stack=$as_lineno_stack
+  { $as_echo "$as_me:${as_lineno-$LINENO}: checking for $2.$3" >&5
+$as_echo_n "checking for $2.$3... " >&6; }
+if eval \${$4+:} false; then :
+  $as_echo_n "(cached) " >&6
 else
   cat confdefs.h - <<_ACEOF >conftest.$ac_ext
 /* end confdefs.h.  */
@@ -2736,7 +2766,7 @@ int
 main ()
 {
 static $2 ac_aggr;
-if (sizeof ac_aggr.$3)
+if (ac_aggr.$3)
 return 0;
   ;
   return 0;
@@ -2745,36 +2775,9 @@ _ACEOF
 if ac_fn_c_try_compile "$LINENO"; then :
   eval "$4=yes"
 else
-  eval "$4=no"
-fi
-rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
-fi
-rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
-fi
-eval ac_res=\$$4
-	       { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_res" >&5
-$as_echo "$ac_res" >&6; }
-  eval $as_lineno_stack; ${as_lineno_stack:+:} unset as_lineno
-
-} # ac_fn_c_check_member
-
-# ac_fn_c_check_decl LINENO SYMBOL VAR INCLUDES
-# ---------------------------------------------
-# Tests whether SYMBOL is declared in INCLUDES, setting cache variable VAR
-# accordingly.
-ac_fn_c_check_decl ()
-{
-  as_lineno=${as_lineno-"$1"} as_lineno_stack=as_lineno_stack=$as_lineno_stack
-  as_decl_name=`echo $2|sed 's/ *(.*//'`
-  as_decl_use=`echo $2|sed -e 's/(/((/' -e 's/)/) 0&/' -e 's/,/) 0& (/g'`
-  { $as_echo "$as_me:${as_lineno-$LINENO}: checking whether $as_decl_name is declared" >&5
-$as_echo_n "checking whether $as_decl_name is declared... " >&6; }
-if eval \${$3+:} false; then :
-  $as_echo_n "(cached) " >&6
-else
   cat confdefs.h - <<_ACEOF >conftest.$ac_ext
 /* end confdefs.h.  */
-$4
+$5
 #ifdef FC_DUMMY_MAIN
 #ifndef FC_DUMMY_MAIN_EQ_F77
 #  ifdef __cplusplus
@@ -2786,31 +2789,28 @@ $4
 int
 main ()
 {
-#ifndef $as_decl_name
-#ifdef __cplusplus
-  (void) $as_decl_use;
-#else
-  (void) $as_decl_name;
-#endif
-#endif
-
+static $2 ac_aggr;
+if (sizeof ac_aggr.$3)
+return 0;
   ;
   return 0;
 }
 _ACEOF
 if ac_fn_c_try_compile "$LINENO"; then :
-  eval "$3=yes"
+  eval "$4=yes"
 else
-  eval "$3=no"
+  eval "$4=no"
 fi
 rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
 fi
-eval ac_res=\$$3
+rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
+fi
+eval ac_res=\$$4
 	       { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_res" >&5
 $as_echo "$ac_res" >&6; }
   eval $as_lineno_stack; ${as_lineno_stack:+:} unset as_lineno
 
-} # ac_fn_c_check_decl
+} # ac_fn_c_check_member
 cat >config.log <<_ACEOF
 This file contains any messages produced by compilers while
 running configure, to aid debugging if configure makes a mistake.
@@ -22187,6 +22187,83 @@ else
 fi
 done
 
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for library containing clock_gettime" >&5
+$as_echo_n "checking for library containing clock_gettime... " >&6; }
+if ${ac_cv_search_clock_gettime+:} false; then :
+  $as_echo_n "(cached) " >&6
+else
+  ac_func_search_save_LIBS=$LIBS
+cat confdefs.h - <<_ACEOF >conftest.$ac_ext
+/* end confdefs.h.  */
+
+/* Override any GCC internal prototype to avoid an error.
+   Use char because int might match the return type of a GCC
+   builtin and then its argument prototype would still apply.  */
+#ifdef __cplusplus
+extern "C"
+#endif
+char clock_gettime ();
+#ifdef FC_DUMMY_MAIN
+#ifndef FC_DUMMY_MAIN_EQ_F77
+#  ifdef __cplusplus
+     extern "C"
+#  endif
+   int FC_DUMMY_MAIN() { return 1; }
+#endif
+#endif
+int
+main ()
+{
+return clock_gettime ();
+  ;
+  return 0;
+}
+_ACEOF
+for ac_lib in '' rt posix4; do
+  if test -z "$ac_lib"; then
+    ac_res="none required"
+  else
+    ac_res=-l$ac_lib
+    LIBS="-l$ac_lib  $ac_func_search_save_LIBS"
+  fi
+  if ac_fn_c_try_link "$LINENO"; then :
+  ac_cv_search_clock_gettime=$ac_res
+fi
+rm -f core conftest.err conftest.$ac_objext \
+    conftest$ac_exeext
+  if ${ac_cv_search_clock_gettime+:} false; then :
+  break
+fi
+done
+if ${ac_cv_search_clock_gettime+:} false; then :
+
+else
+  ac_cv_search_clock_gettime=no
+fi
+rm conftest.$ac_ext
+LIBS=$ac_func_search_save_LIBS
+fi
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_search_clock_gettime" >&5
+$as_echo "$ac_cv_search_clock_gettime" >&6; }
+ac_res=$ac_cv_search_clock_gettime
+if test "$ac_res" != no; then :
+  test "$ac_res" = "none required" || LIBS="$ac_res $LIBS"
+
+fi
+
+for ac_func in clock_gettime
+do :
+  ac_fn_c_check_func "$LINENO" "clock_gettime" "ac_cv_func_clock_gettime"
+if test "x$ac_cv_func_clock_gettime" = xyes; then :
+  cat >>confdefs.h <<_ACEOF
+#define HAVE_CLOCK_GETTIME 1
+_ACEOF
+ have_clock_gettime="yes"
+else
+  have_clock_gettime="no"
+fi
+done
+
 
 for ac_header in sys/resource.h sys/time.h unistd.h sys/ioctl.h sys/stat.h
 do :
@@ -25729,6 +25806,15 @@ $as_echo "#define HAVE_THREADSAFE 1" >>confdefs.h
 
 fi
 
+ac_fn_c_check_decl "$LINENO" "CLOCK_MONOTONIC" "ac_cv_have_decl_CLOCK_MONOTONIC" "#include <time.h>
+"
+if test "x$ac_cv_have_decl_CLOCK_MONOTONIC" = xyes; then :
+  have_clock_monotonic="yes"
+else
+  have_clock_monotonic="no"
+fi
+
+
 
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking for tm_gmtoff in struct tm" >&5
 $as_echo_n "checking for tm_gmtoff in struct tm... " >&6; }
diff --git a/configure.in b/configure.in
index 10386b8..e7e292a 100644
--- a/configure.in
+++ b/configure.in
@@ -1344,11 +1344,14 @@ AC_HEADER_STDC
 AC_HEADER_TIME
 
 dnl ----------------------------------------------------------------------
-dnl Check for these two functions before <sys/time.h> is checked for, otherwise
-dnl they are not detected correctly on Solaris [2.6].
+dnl Check for these two functions before the time headers are checked
+dnl for, otherwise they are not detected correctly on Solaris (the
+dnl configure test will fail due to multiply-defined symbols).
 dnl
 AC_CHECK_FUNCS(difftime)
 AC_CHECK_FUNCS(gettimeofday, [have_gettime="yes"], [have_gettime="no"])
+AC_SEARCH_LIBS([clock_gettime], [rt posix4])
+AC_CHECK_FUNCS([clock_gettime],[have_clock_gettime="yes"],[have_clock_gettime="no"])
 
 dnl Unix
 AC_CHECK_HEADERS([sys/resource.h sys/time.h unistd.h sys/ioctl.h sys/stat.h])
@@ -2074,6 +2077,12 @@ if test "X$THREADSAFE" = "Xyes"; then
 fi
 
 dnl ----------------------------------------------------------------------
+dnl Check for MONOTONIC_TIMER support (used in clock_gettime).  This has
+dnl to be done after any POSIX/BSD defines to ensure that the test gets
+dnl the correct POSIX level on linux.
+AC_CHECK_DECL(CLOCK_MONOTONIC,[have_clock_monotonic="yes"],[have_clock_monotonic="no"],[[#include <time.h>]])
+
+dnl ----------------------------------------------------------------------
 dnl How does one figure out the local time zone?  Anyone know of a
 dnl Posix way to do this?
 dnl
diff --git a/src/H5config.h.in b/src/H5config.h.in
index 487ac1d..a2059f5 100644
--- a/src/H5config.h.in
+++ b/src/H5config.h.in
@@ -68,6 +68,9 @@
 /* Define if the compiler understands the __func__ keyword */
 #undef HAVE_C99_FUNC
 
+/* Define to 1 if you have the `clock_gettime' function. */
+#undef HAVE_CLOCK_GETTIME
+
 /* Define if the function stack tracing code is to be compiled in */
 #undef HAVE_CODESTACK
 
diff --git a/vms/src/h5pubconf.h b/vms/src/h5pubconf.h
index 67e7782..b262a6f 100644
--- a/vms/src/h5pubconf.h
+++ b/vms/src/h5pubconf.h
@@ -65,13 +65,13 @@
 #define H5_FP_TO_ULLONG_RIGHT_MAXIMUM 1
 
 /* Define if gettimeofday() populates the tz pointer passed in */
-/* #define H5_GETTIMEOFDAY_GIVES_TZ 1 */
+/* #undef H5_GETTIMEOFDAY_GIVES_TZ */
 
 /* Define to 1 if you have the `alarm' function. */
 #define H5_HAVE_ALARM 1
 
 /* Define if the __attribute__(()) extension is present */
-/* #define H5_HAVE_ATTRIBUTE 1 */
+/* #undef H5_HAVE_ATTRIBUTE */
 
 /* Define to 1 if you have the `BSDgettimeofday' function. */
 /* #undef H5_HAVE_BSDGETTIMEOFDAY */
@@ -83,6 +83,9 @@
 /* Define if the compiler understands the __func__ keyword */
 #define H5_HAVE_C99_FUNC 1
 
+/* Define to 1 if you have the `clock_gettime' function. */
+#define H5_HAVE_CLOCK_GETTIME 1
+
 /* Define if the function stack tracing code is to be compiled in */
 /* #undef H5_HAVE_CODESTACK */
 
@@ -103,10 +106,10 @@
 /* #undef H5_HAVE_DMALLOC_H */
 
 /* Define if library information should be embedded in the executables */
-/* #define H5_HAVE_EMBEDDED_LIBINFO 1 */
+/* #undef H5_HAVE_EMBEDDED_LIBINFO */
 
 /* Define to 1 if you have the <features.h> header file. */
-/* #define H5_HAVE_FEATURES_H 1 */
+/* #undef H5_HAVE_FEATURES_H */
 
 /* Define if support for deflate (zlib) filter is enabled */
 #define H5_HAVE_FILTER_DEFLATE 1
@@ -127,7 +130,7 @@
 /* #undef H5_HAVE_FILTER_SZIP */
 
 /* Define to 1 if you have the `fork' function. */
-/* #define H5_HAVE_FORK 1 */
+/* #undef H5_HAVE_FORK */
 
 /* Define to 1 if you have the `frexpf' function. */
 #define H5_HAVE_FREXPF 1
@@ -135,23 +138,23 @@
 /* Define to 1 if you have the `frexpl' function. */
 #define H5_HAVE_FREXPL 1
 
-/* Define to 1 if you have the `fseek64' function. */
-/* #undef H5_HAVE_FSEEK64 */
-
 /* Define to 1 if you have the `fseeko' function. */
 #define H5_HAVE_FSEEKO 1
 
+/* Define to 1 if you have the `fseek64' function. */
+/* #undef H5_HAVE_FSEEKO64 */
+
 /* Define to 1 if you have the `fstat64' function. */
-/* #define H5_HAVE_FSTAT64 1 */
+/* #undef H5_HAVE_FSTAT64 */
 
 /* Define to 1 if you have the `ftello' function. */
 #define H5_HAVE_FTELLO 1
 
 /* Define to 1 if you have the `ftruncate64' function. */
-/* #define H5_HAVE_FTRUNCATE64 1 */
+/* #undef H5_HAVE_FTRUNCATE64 */
 
 /* Define if the compiler understands the __FUNCTION__ keyword */
-/* #define H5_HAVE_FUNCTION 1 */
+/* #undef H5_HAVE_FUNCTION */
 
 /* Define to 1 if you have the `GetConsoleScreenBufferInfo' function. */
 /* #undef H5_HAVE_GETCONSOLESCREENBUFFERINFO */
@@ -160,10 +163,10 @@
 #define H5_HAVE_GETHOSTNAME 1
 
 /* Define to 1 if you have the `getpwuid' function. */
-/* #define H5_HAVE_GETPWUID 1 */
+/* #undef H5_HAVE_GETPWUID */
 
 /* Define to 1 if you have the `getrusage' function. */
-/* #define H5_HAVE_GETRUSAGE 1 */
+/* #undef H5_HAVE_GETRUSAGE */
 
 /* Define to 1 if you have the `gettextinfo' function. */
 /* #undef H5_HAVE_GETTEXTINFO */
@@ -227,16 +230,22 @@
 /* #undef H5_HAVE_LIBSZ */
 
 /* Define to 1 if you have the `z' library (-lz). */
-/* #define H5_HAVE_LIBZ 1 */
+/* #undef H5_HAVE_LIBZ */
 
 /* Define to 1 if you have the `longjmp' function. */
 #define H5_HAVE_LONGJMP 1
 
 /* Define to 1 if you have the `lseek64' function. */
-/* #define H5_HAVE_LSEEK64 1 */
+/* #undef H5_HAVE_LSEEK64 */
 
 /* Define to 1 if you have the `lstat' function. */
-/* #define H5_HAVE_LSTAT 1 */
+/* #undef H5_HAVE_LSTAT */
+
+/* Define to 1 if you have the <mach/mach_time.h> header file. */
+/* #undef H5_HAVE_MACH_MACH_TIME_H */
+
+/* Define to 1 if you have the <memory.h> header file. */
+/* #undef H5_HAVE_MEMORY_H */
 
 /* Define if we have MPE support */
 /* #undef H5_HAVE_MPE */
@@ -277,6 +286,12 @@
 /* Define to 1 if you have the `signal' function. */
 #define H5_HAVE_SIGNAL 1
 
+/* Define to 1 if you have the `sigprocmask' function. */
+/* #undef H5_HAVE_SIGPROCMASK */
+
+/* Define to 1 if you have the `sigsetjmp' function. */
+/* #undef H5_HAVE_SIGSETJMP */
+
 /* Define to 1 if you have the `snprintf' function. */
 #define H5_HAVE_SNPRINTF 1
 
@@ -284,16 +299,16 @@
 #define H5_HAVE_SRANDOM 1
 
 /* Define to 1 if you have the `stat64' function. */
-/* #define H5_HAVE_STAT64 1 */
+/* #undef H5_HAVE_STAT64 */
 
 /* Define if `struct stat' has the `st_blocks' field */
-/* #define H5_HAVE_STAT_ST_BLOCKS 1 */
+/* #undef H5_HAVE_STAT_ST_BLOCKS */
 
 /* Define to 1 if you have the <stddef.h> header file. */
 #define H5_HAVE_STDDEF_H 1
 
 /* Define to 1 if you have the <stdint.h> header file. */
-/* #define H5_HAVE_STDINT_H 1 */
+/* #undef H5_HAVE_STDINT_H */
 
 /* Define to 1 if you have the <stdlib.h> header file. */
 #define H5_HAVE_STDLIB_H 1
@@ -311,7 +326,7 @@
 /* #undef H5_HAVE_STRUCT_TEXT_INFO */
 
 /* Define if `struct timezone' is defined */
-/* #define H5_HAVE_STRUCT_TIMEZONE 1 */
+/* #undef H5_HAVE_STRUCT_TIMEZONE */
 
 /* Define to 1 if `tm_zone' is member of `struct tm'. */
 #define H5_HAVE_STRUCT_TM_TM_ZONE 1
@@ -320,7 +335,7 @@
 /* #undef H5_HAVE_STRUCT_VIDEOCONFIG */
 
 /* Define to 1 if you have the `symlink' function. */
-/* #define H5_HAVE_SYMLINK 1 */
+/* #undef H5_HAVE_SYMLINK */
 
 /* Define to 1 if you have the `system' function. */
 #define H5_HAVE_SYSTEM 1
@@ -374,7 +389,7 @@
 #define H5_HAVE_TMPFILE 1
 
 /* Define if `tm_gmtoff' is a member of `struct tm' */
-/* #define H5_HAVE_TM_GMTOFF 1 */
+/* #undef H5_HAVE_TM_GMTOFF */
 
 /* Define to 1 if your `struct tm' has `tm_zone'. Deprecated, use
    `HAVE_STRUCT_TM_TM_ZONE' instead. */
@@ -388,7 +403,7 @@
 #define H5_HAVE_UNISTD_H 1
 
 /* Define to 1 if you have the `vasprintf' function. */
-/* #define H5_HAVE_VASPRINTF 1 */
+/* #undef H5_HAVE_VASPRINTF */
 
 /* Define to 1 if you have the `vsnprintf' function. */
 #define H5_HAVE_VSNPRINTF 1
@@ -419,7 +434,7 @@
 
 /* Define if your system can't handle converting floating-point values to long
    long. */
-/* #define H5_HW_FP_TO_LLONG_NOT_WORKS 1 */
+/* #undef H5_HW_FP_TO_LLONG_NOT_WORKS */
 
 /* Define if HDF5's high-level library headers should be included in hdf5.h */
 #define H5_INCLUDE_HL 1
@@ -438,6 +453,10 @@
    values correctly. */
 #define H5_LDOUBLE_TO_LLONG_ACCURATE 1
 
+/* Define if your system converts long double to (unsigned) long values with
+   special algorithm. */
+/* #undef H5_LDOUBLE_TO_LONG_SPECIAL */
+
 /* Define if your system can convert long double to unsigned int values
    correctly. */
 #define H5_LDOUBLE_TO_UINT_ACCURATE 1
@@ -449,6 +468,10 @@
    values correctly. */
 #define H5_LLONG_TO_LDOUBLE_CORRECT 1
 
+/* Define if your system can convert (unsigned) long to long double values
+   with special algorithm. */
+/* #undef H5_LONG_TO_LDOUBLE_SPECIAL */
+
 /* Define to the sub-directory in which libtool stores uninstalled libraries.
    */
 #define H5_LT_OBJDIR ".libs/"
@@ -484,6 +507,9 @@
 /* Define to the one symbol short name of this package. */
 #define H5_PACKAGE_TARNAME "hdf5"
 
+/* Define to the home page for this package. */
+#define H5_PACKAGE_URL ""
+
 /* Define to the version of this package. */
 #define H5_PACKAGE_VERSION "1.9.95"
 
@@ -548,11 +574,14 @@
 #define H5_SIZEOF_LONG_LONG 8
 
 /* The size of `off64_t', as computed by sizeof. */
-/* #define H5_SIZEOF_OFF64_T 8 */
+#define H5_SIZEOF_OFF64_T 0
 
 /* The size of `off_t', as computed by sizeof. */
 #define H5_SIZEOF_OFF_T 8
 
+/* The size of `ptrdiff_t', as computed by sizeof. */
+#define H5_SIZEOF_PTRDIFF_T 4
+
 /* The size of `short', as computed by sizeof. */
 #define H5_SIZEOF_SHORT 2
 
@@ -608,7 +637,7 @@
 #define H5_STDC_HEADERS 1
 
 /* Define if strict file format checks are enabled */
-/* #define H5_STRICT_FORMAT_CHECKS 1 */
+/* #undef H5_STRICT_FORMAT_CHECKS */
 
 /* Define if your system supports pthread_attr_setscope(&attribute,
    PTHREAD_SCOPE_SYSTEM) call. */
@@ -628,6 +657,10 @@
    correct precision. */
 #define H5_ULLONG_TO_LDOUBLE_PRECISION 1
 
+/* Define if your system accurately converting unsigned long to float values.
+   */
+/* #undef H5_ULONG_TO_FLOAT_ACCURATE */
+
 /* Define if your system can accurately convert unsigned (long) long values to
    floating-point values. */
 #define H5_ULONG_TO_FP_BOTTOM_BIT_ACCURATE 1
@@ -655,15 +688,13 @@
 
 /* Define to 1 if your processor stores words with the most significant byte
    first (like Motorola and SPARC, unlike Intel and VAX). */
-/* #if defined AC_APPLE_UNIVERSAL_BUILD */
-/* # if defined __BIG_ENDIAN__ */
-/* #  define WORDS_BIGENDIAN 1 */
-/* # endif */
-/* #else */
-/* # ifndef WORDS_BIGENDIAN */
-/* #  undef WORDS_BIGENDIAN */
-/* # endif */
-/* #endif */
+/* #undef H5_WORDS_BIGENDIAN */
+
+/* Number of bits in a file offset, on hosts where this is settable. */
+/* #undef H5__FILE_OFFSET_BITS */
+
+/* Define for large files, on AIX-style hosts. */
+/* #undef H5__LARGE_FILES */
 
 /* Define to empty if `const' does not conform to ANSI C. */
 /* #undef H5_const */
@@ -677,6 +708,9 @@
 /* Define to `long int' if <sys/types.h> does not define. */
 /* #undef H5_off_t */
 
+/* Define to `long' if <sys/types.h> does not define. */
+/* #undef H5_ptrdiff_t */
+
 /* Define to `unsigned long' if <sys/types.h> does not define. */
 /* #undef H5_size_t */
 
diff --git a/windows/src/H5pubconf.h b/windows/src/H5pubconf.h
index 10d2c9a..87eae28 100644
--- a/windows/src/H5pubconf.h
+++ b/windows/src/H5pubconf.h
@@ -1,11 +1,28 @@
-/* windows/src/H5pubconf.h. Adapted from generated Linux src/H5pubconf.h   */
-/* src/H5config.h.  Generated from H5config.h.in by configure.  */
-/* src/H5config.h.in.  Generated from configure.in by autoheader.  */
-
-/*
- * Windows Specific Definitions
+/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
+ * Copyright by The HDF Group.                                               *
+ * Copyright by the Board of Trustees of the University of Illinois.         *
+ * All rights reserved.                                                      *
+ *                                                                           *
+ * This file is part of HDF5.  The full HDF5 copyright notice, including     *
+ * terms governing use, modification, and redistribution, is contained in    *
+ * the files COPYING and Copyright.html.  COPYING can be found at the root   *
+ * of the source code distribution tree; Copyright.html can be found at the  *
+ * root level of an installed copy of the electronic HDF5 document set and   *
+ * is linked from the top-level documents page.  It can also be found at     *
+ * http://hdfgroup.org/HDF5/doc/Copyright.html.  If you do not have          *
+ * access to either file, you may request a copy from help@hdfgroup.org.     *
+ * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
+ 
+/* NOTE: This file is created by hand from the Linux src/H5pubconf.h file.
+ * Most Windows builds are handled by CMake which generates its own 
+ * H5pubconf.h file so this file can easily get out of date.  Please notify
+ * Dana Robinson <derobins@hdfgroup.org> if the settings here have issues.
  */
 
+/********************************
+ * Windows Specific Definitions *
+ ********************************/
+
 /* Define if the Windows virtual file driver should be compiled */
 #define H5_HAVE_WINDOWS 1
 
@@ -15,16 +32,12 @@
 /* Define if using a Windows compiler (i.e. Visual Studio) */
 #define H5_HAVE_VISUAL_STUDIO 1
 
-/* Define if the Windows virtual file driver should use buffered IO functions */
-/* #undef WINDOWS_USE_STDIO */
+/***************************************
+ * End of Windows Specific Definitions *
+ ***************************************/
 
-/* Define the maximum write size for the Windows file driver.  Larger writes
-   will be split into many writes.  Safe values are 1 <= WINDOWS_MAX_BUF <= 2GB-1. */
-#define WINDOWS_MAX_BUF (1024 * 1024 * 1024)
-
-/*
- * End of Windows Specific Definitions
- */
+/* Define if building universal (internal helper macro) */
+/* #undef H5_AC_APPLE_UNIVERSAL_BUILD */
  
 /* Define if your system generates wrong code for log2 routine. */
 /* #undef H5_BAD_LOG2_CODE_GENERATED */
@@ -74,7 +87,7 @@
 
 /* Define if your system has right maximum convert floating-point to unsigned
    long long values. */
-/* #undef H5_FP_TO_ULLONG_RIGHT_MAXIMUM 1 */
+/* #undef H5_FP_TO_ULLONG_RIGHT_MAXIMUM */
 
 /* Define if gettimeofday() populates the tz pointer passed in */
 #define H5_GETTIMEOFDAY_GIVES_TZ 1
@@ -95,6 +108,9 @@
 /* Define if the compiler understand the __func__ keyword */
 /* #undef H5_HAVE_C99_FUNC */
 
+/* Define to 1 if you have the `clock_gettime' function. */
+/* #undef H5_HAVE_CLOCK_GETTIME */
+
 /* Define if the function stack tracing code is to be compiled in */
 /* #undef H5_HAVE_CODESTACK */
 
@@ -114,6 +130,9 @@
 /* Define to 1 if you have the <dmalloc.h> header file. */
 /* #undef H5_HAVE_DMALLOC_H */
 
+/* Define if library information should be embedded in the executables */
+/* #undef H5_HAVE_EMBEDDED_LIBINFO */
+
 /* Define to 1 if you have the <features.h> header file. */
 /* #undef H5_HAVE_FEATURES_H */
 
@@ -144,18 +163,24 @@
 /* Define to 1 if you have the `frexpl' function. */
 /* #undef H5_HAVE_FREXPL */
 
-/* Define to 1 if you have the `fseek64' function. */
-/* #undef H5_HAVE_FSEEK64 */
-
 /* Define to 1 if you have the `fseeko' function. */
 /* #undef H5_HAVE_FSEEKO */
 
+/* Define to 1 if you have the `fseek64' function. */
+/* #undef H5_HAVE_FSEEKO64 */
+
 /* Define to 1 if you have the `fstat64' function. */
 /* #undef H5_HAVE_FSTAT64 */
 
 /* Define to 1 if you have the `ftello' function. */
 /* #undef H5_HAVE_FTELLO */
 
+/* Define to 1 if you have the `ftello64' function. */
+/* #undef H5_HAVE_FTELLO64 */
+
+/* Define to 1 if you have the `ftruncate64' function. */
+/* #undef H5_HAVE_FTRUNCATE64 */
+
 /* Define if the compiler understand the __FUNCTION__ keyword */
 #define H5_HAVE_FUNCTION 1
 
@@ -169,7 +194,7 @@
 /* #undef H5_HAVE_GETPWUID */
 
 /* Define to 1 if you have the `getrusage' function. */
-/* #define H5_HAVE_GETRUSAGE 1 */
+/* #undef H5_HAVE_GETRUSAGE */
 
 /* Define to 1 if you have the `gettextinfo' function. */
 /* #undef H5_HAVE_GETTEXTINFO */
@@ -241,6 +266,15 @@
 /* Define to 1 if you have the `lseek64' function. */
 /* #undef H5_HAVE_LSEEK64 */
 
+/* Define to 1 if you have the `lstat' function. */
+/* #undef H5_HAVE_LSTAT */
+
+/* Define to 1 if you have the <mach/mach_time.h> header file. */
+/* #undef H5_HAVE_MACH_MACH_TIME_H */
+
+/* Define to 1 if you have the <memory.h> header file. */
+/* #undef H5_HAVE_MEMORY_H */
+
 /* Define if we have MPE support */
 /* #undef H5_HAVE_MPE */
 
@@ -274,15 +308,18 @@
 /* Define to 1 if you have the `setsysinfo' function. */
 /* #undef H5_HAVE_SETSYSINFO */
 
-/* Define to 1 if you have the `sigaction' function. */
-/* #undef H5_HAVE_SIGACTION */
-
 /* Define to 1 if you have the `siglongjmp' function. */
 /* #undef H5_HAVE_SIGLONGJMP */
 
 /* Define to 1 if you have the `signal' function. */
 #define H5_HAVE_SIGNAL 1
 
+/* Define to 1 if you have the `sigprocmask' function. */
+/* #undef H5_HAVE_SIGPROCMASK */
+
+/* Define to 1 if you have the `sigsetjmp' function. */
+/* #undef H5_HAVE_SIGSETJMP */
+
 /* Define to 1 if you have the `snprintf' function. */
 /* #undef H5_HAVE_SNPRINTF */
 
@@ -325,6 +362,9 @@
 /* Define if `struct videoconfig' is defined */
 /* #undef H5_HAVE_STRUCT_VIDEOCONFIG */
 
+/* Define to 1 if you have the `symlink' function. */
+/* #undef H5_HAVE_SYMLINK */
+
 /* Define to 1 if you have the `system' function. */
 #define H5_HAVE_SYSTEM 1
 
@@ -438,6 +478,10 @@
    values correctly. */
 #define H5_LDOUBLE_TO_LLONG_ACCURATE 1
 
+/* Define if your system converts long double to (unsigned) long values with
+   special algorithm. */
+/* #undef H5_LDOUBLE_TO_LONG_SPECIAL */
+
 /* Define if your system can convert long double to unsigned int values
    correctly. */
 #define H5_LDOUBLE_TO_UINT_ACCURATE 1
@@ -449,6 +493,10 @@
    values correctly. */
 #define H5_LLONG_TO_LDOUBLE_CORRECT 1
 
+/* Define if your system can convert (unsigned) long to long double values
+   with special algorithm. */
+/* #undef H5_LONG_TO_LDOUBLE_SPECIAL */
+
 /* Define to the sub-directory in which libtool stores uninstalled libraries.
    */
 #define H5_LT_OBJDIR ".libs/"
@@ -484,6 +532,9 @@
 /* Define to the one symbol short name of this package. */
 #define H5_PACKAGE_TARNAME "hdf5"
 
+/* Define to the home page for this package. */
+#define H5_PACKAGE_URL ""
+
 /* Define to the version of this package. */
 #define H5_PACKAGE_VERSION "1.9.95"
 
@@ -553,6 +604,13 @@
 /* The size of `off_t', as computed by sizeof. */
 #define H5_SIZEOF_OFF_T 4
 
+/* The size of `ptrdiff_t', as computed by sizeof. */
+#ifndef _WIN64
+#define H5_SIZEOF_PTRDIFF_T 4
+#else
+#define H5_SIZEOF_PTRDIFF_T 8
+#endif /* _WIN64 */
+
 /* The size of `short', as computed by sizeof. */
 #define H5_SIZEOF_SHORT 2
 
@@ -602,6 +660,9 @@
 /* The size of `uint_least8_t', as computed by sizeof. */
 #define H5_SIZEOF_UINT_LEAST8_T 0
 
+/* The size of `unsigned', as computed by sizeof. */
+#define H5_SIZEOF_UNSIGNED 4
+
 /* The size of `__int64', as computed by sizeof. */
 #define H5_SIZEOF___INT64 8
 
@@ -629,6 +690,10 @@
    correct precision. */
 #define H5_ULLONG_TO_LDOUBLE_PRECISION 1
 
+/* Define if your system accurately converting unsigned long to float values.
+   */
+/* #undef H5_ULONG_TO_FLOAT_ACCURATE */
+
 /* Define if your system can accurately convert unsigned (long) long values to
    floating-point values. */
 /* #undef H5_ULONG_TO_FP_BOTTOM_BIT_ACCURATE */
@@ -658,6 +723,12 @@
    first (like Motorola and SPARC, unlike Intel and VAX). */
 /* #undef H5_WORDS_BIGENDIAN */
 
+/* Number of bits in a file offset, on hosts where this is settable. */
+/* #undef H5__FILE_OFFSET_BITS */
+
+/* Define for large files, on AIX-style hosts. */
+/* #undef H5__LARGE_FILES */
+
 /* Define to empty if `const' does not conform to ANSI C. */
 /* #undef H5_const */
 
@@ -670,8 +741,15 @@
 /* Define to `long int' if <sys/types.h> does not define. */
 /* #undef H5_off_t */
 
+/* Define to `long' if <sys/types.h> does not define. */
+/* #undef H5_ptrdiff_t */
+
 /* Define to `unsigned long' if <sys/types.h> does not define. */
 /* #undef H5_size_t */
 
 /* Define to `long' if <sys/types.h> does not define. */
+#ifndef _WIN64
 #define H5_ssize_t long
+#else
+#define H5_ssize_t long long
+#endif /* _WIN64 */