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authormainzer <mainzer#hdfgroup.org>2019-01-15 22:36:51 (GMT)
committermainzer <mainzer#hdfgroup.org>2019-01-15 22:36:51 (GMT)
commitb4f607bc13841c5366f232e16c776d700d15b5be (patch)
tree1aba531e6d30925e11aa6393a14a4c91a0e0dec8
parent4f8917f9086088ac5cc7fa3c3deb400afbf33b68 (diff)
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Intermin commit to allow update from Vailin's recent changes
-rw-r--r--src/H5AC.c22
-rw-r--r--src/H5C.c160
-rw-r--r--src/H5Cpkg.h16
-rw-r--r--src/H5Cprivate.h2
-rw-r--r--src/H5FD.c3
-rw-r--r--src/H5FDint.c2
-rw-r--r--src/H5FDprivate.h4
-rw-r--r--src/H5FDvfd_swmr.c490
-rw-r--r--src/H5Fint.c197
-rw-r--r--src/H5Ftest.c6
-rw-r--r--src/H5MV.c41
-rw-r--r--src/H5PB.c10
-rw-r--r--test/testvfdswmr.sh.in7
-rw-r--r--test/vfd_swmr.c112
-rw-r--r--test/vfd_swmr_addrem_writer.c4
-rw-r--r--test/vfd_swmr_generator.c4
-rw-r--r--test/vfd_swmr_reader.c4
-rw-r--r--test/vfd_swmr_remove_reader.c4
-rw-r--r--test/vfd_swmr_remove_writer.c4
-rw-r--r--test/vfd_swmr_sparse_reader.c4
-rw-r--r--test/vfd_swmr_sparse_writer.c4
-rw-r--r--test/vfd_swmr_writer.c4
22 files changed, 875 insertions, 229 deletions
diff --git a/src/H5AC.c b/src/H5AC.c
index d7f5002..a2ec13b 100644
--- a/src/H5AC.c
+++ b/src/H5AC.c
@@ -278,6 +278,11 @@ H5AC_cache_image_pending(const H5F_t *f)
* matzke@llnl.gov
* Jul 9 1997
*
+ * Changes: Added code to configrue the metadata cache for VFD SWMR
+ * reader operations when indicated.
+ *
+ * JRM -- 1/15/19
+ *
*-------------------------------------------------------------------------
*/
herr_t
@@ -418,6 +423,23 @@ H5AC_create(const H5F_t *f, H5AC_cache_config_t *config_ptr, H5AC_cache_image_co
HGOTO_ERROR(H5E_CACHE, H5E_SYSTEM, FAIL, "unable to emit log message")
} /* end if */
+ /* Configure the metadata cache for VFD SWMR reader operation if
+ * specified.
+ */
+ if ( ( H5F_VFD_SWMR_CONFIG(f) ) &&
+ ( !f->shared->vfd_swmr_config.vfd_swmr_writer ) ) {
+
+ HDassert(!(H5F_INTENT(f) & H5F_ACC_RDWR));
+ HDassert(f->shared->fs_page_size > 0);
+
+ if ( H5C_set_vfd_swmr_reader(f->shared->cache, TRUE,
+ f->shared->fs_page_size) < 0 )
+
+ HGOTO_ERROR(H5E_CACHE, H5E_CANTSET, FAIL, \
+ "can't configure MDC for VFD SWMR reader operations");
+
+ }
+
/* Set the cache parameters */
if(H5AC_set_cache_auto_resize_config(f->shared->cache, config_ptr) < 0)
HGOTO_ERROR(H5E_CACHE, H5E_CANTSET, FAIL, "auto resize configuration failed")
diff --git a/src/H5C.c b/src/H5C.c
index bd2d2e2..7bdbc1b 100644
--- a/src/H5C.c
+++ b/src/H5C.c
@@ -336,6 +336,7 @@ H5C_create(size_t max_cache_size,
for(i = 0; i < H5C__PAGE_HASH_TABLE_LEN; i++) {
(cache_ptr->page_index)[i] = NULL;
}
+ cache_ptr->page_size = 0;
/* Tagging Field Initializations */
cache_ptr->ignore_tags = FALSE;
@@ -983,7 +984,6 @@ H5C_evict_or_refresh_all_entries_in_page(H5F_t * f, uint64_t page,
unsigned flush_flags = (H5C__FLUSH_INVALIDATE_FLAG |
H5C__FLUSH_CLEAR_ONLY_FLAG);
haddr_t tag;
- H5PB_t * pb_ptr = NULL;
H5C_t * cache_ptr = NULL;
H5C_cache_entry_t * entry_ptr;
H5C_cache_entry_t * follow_ptr = NULL;
@@ -1001,16 +1001,17 @@ H5C_evict_or_refresh_all_entries_in_page(H5F_t * f, uint64_t page,
HDassert(cache_ptr->magic == H5C__H5C_T_MAGIC);
HDassert(cache_ptr->vfd_swmr_reader);
+#if 1 /* JRM */
+ HDfprintf(stderr,
+ "H5C_evict_or_refresh_all_entries_in_page() entering. page = %lld\n",
+ page);
+#endif /* JRM */
+
/* since file must be opened R/O for a VFD SWMR reader, the skip
* list must be empty. Verify this.
*/
HDassert(cache_ptr->slist_len == 0);
- pb_ptr = f->shared->pb_ptr;
-
- HDassert(pb_ptr);
- HDassert(pb_ptr->magic == H5PB__H5PB_T_MAGIC);
-
i = H5C__PI_HASH_FCN(page);
entry_ptr = (cache_ptr->page_index)[i];
@@ -1021,8 +1022,9 @@ H5C_evict_or_refresh_all_entries_in_page(H5F_t * f, uint64_t page,
if ( entry_ptr->page == page ) {
- HDassert(entry_ptr->addr >= (haddr_t)(page * pb_ptr->page_size));
- HDassert(entry_ptr->addr < (haddr_t)((page+1) * pb_ptr->page_size));
+ HDassert(entry_ptr->addr >= (haddr_t)(page * cache_ptr->page_size));
+ HDassert(entry_ptr->addr <
+ (haddr_t)((page+1) * cache_ptr->page_size));
/* since end of tick occurs only on API call entry in
* the VFD SWMR reader case, the entry must not be protected.
@@ -1047,6 +1049,11 @@ H5C_evict_or_refresh_all_entries_in_page(H5F_t * f, uint64_t page,
tag = entry_ptr->tag_info->tag;
HDassert(!(entry_ptr->tag_info->corked));
+#if 1 /* JRM */
+ HDfprintf(stderr,
+ "evicting tagged entries addr/page/tag == %lld/%lld/%lld\n",
+ entry_ptr->addr, entry_ptr->page, tag);
+#endif /* JRM */
/* passing TRUE for the match_global parameter. Look
* into this and verify that it is the right thing to
@@ -1061,6 +1068,10 @@ H5C_evict_or_refresh_all_entries_in_page(H5F_t * f, uint64_t page,
entry_ptr = NULL;
} else if ( entry_ptr->type->refresh ) {
+#if 1 /* JRM */
+ HDfprintf(stderr, "refreshing addr/page/tag == %lld/%lld\n",
+ entry_ptr->addr, entry_ptr->page);
+#endif /* JRM */
/* If the entry is pinned and not tagged, it is a global
* object such as the super block, persistant free
* space manager, or a global heap.
@@ -1205,6 +1216,19 @@ H5C_evict_or_refresh_all_entries_in_page(H5F_t * f, uint64_t page,
* skip list -- thus no need for the
* H5C__DEL_FROM_SLIST_ON_DESTROY_FLAG.
*/
+#if 1 /* JRM */
+ if ( entry_ptr->tag_info ) {
+
+ HDfprintf(stderr,
+ "evicting entry addr/page/tag == %lld/%lld/%lld\n",
+ entry_ptr->addr, entry_ptr->page,
+ entry_ptr->tag_info->tag);
+ } else {
+ HDfprintf(stderr,
+ "evicting entry addr/page == %lld/%lld no tag\n",
+ entry_ptr->addr, entry_ptr->page);
+ }
+#endif /* JRM */
if ( H5C__flush_single_entry(f, entry_ptr, flush_flags) < 0 )
HGOTO_ERROR(H5E_CACHE, H5E_CANTEXPUNGE, FAIL, \
@@ -1628,12 +1652,9 @@ H5C_insert_entry(H5F_t * f,
HDassert( cache_ptr );
HDassert( cache_ptr->magic == H5C__H5C_T_MAGIC );
- /* if this is a VFD SWMR reader, verify that the page buffer is
- * configured.
- */
- HDassert( ( ! cache_ptr->vfd_swmr_reader ) ||
- ( ( f->shared->pb_ptr ) &&
- ( f->shared->pb_ptr->magic == H5PB__H5PB_T_MAGIC ) ) );
+ /* if this is a VFD SWMR reader, verify that the page size is defined */
+ HDassert( ( ! cache_ptr->vfd_swmr_reader ) ||
+ ( cache_ptr->page_size > 0 ) );
HDassert( type );
HDassert( type->mem_type == cache_ptr->class_table_ptr[type->id]->mem_type );
@@ -1767,7 +1788,7 @@ H5C_insert_entry(H5F_t * f,
/* initialize fields supporting VFD SWMR */
if ( cache_ptr->vfd_swmr_reader ) {
- entry_ptr->page = (addr / f->shared->pb_ptr->page_size);
+ entry_ptr->page = (addr / cache_ptr->page_size);
} else {
@@ -2256,11 +2277,7 @@ done:
* 6/2/04
*
* Changes: Added code to update cache entry page field required
- * by VFD SWMR. To do this, we need the page size used
- * by the page buffer. The simple way to do this was to
- * replace the cache_ptr parameter with a pointer to the
- * H5F_t, and then lookup the cache_ptr and pb_ptr as
- * required.
+ * by VFD SWMR.
* JRM -- 12/13/18
*
*-------------------------------------------------------------------------
@@ -2287,14 +2304,9 @@ H5C_move_entry(H5F_t * f,
HDassert(cache_ptr);
HDassert(cache_ptr->magic == H5C__H5C_T_MAGIC);
- /* if this is a VFD SWMR reader, verify that the page buffer is
- * configured.
- */
+ /* if this is a VFD SWMR reader, verify that the page size is defined */
HDassert(( ! cache_ptr->vfd_swmr_reader ) ||
- ( ( f->shared->pb_ptr ) &&
- ( f->shared->pb_ptr->magic == H5PB__H5PB_T_MAGIC ) ));
-
-
+ ( cache_ptr->page_size > 0 ) );
HDassert(type);
HDassert(H5F_addr_defined(old_addr));
@@ -2375,7 +2387,7 @@ H5C_move_entry(H5F_t * f,
*/
if ( cache_ptr->vfd_swmr_reader ) {
- entry_ptr->page = (new_addr / f->shared->pb_ptr->page_size);
+ entry_ptr->page = (new_addr / cache_ptr->page_size);
}
@@ -3411,6 +3423,43 @@ done:
/*-------------------------------------------------------------------------
+ * Function: H5C_set_vfd_swmr_reader()
+ *
+ * Purpose: Set cache_ptr->vfd_swmr_reader and cache_ptr->page_size to
+ * the values specified in the parameter list.
+ *
+ * Return: SUCCEED on success, and FAIL on failure.
+ *
+ * Programmer: John Mainzer
+ * 1/15/19
+ *
+ * Changes: None.
+ *
+ *-------------------------------------------------------------------------
+ */
+herr_t
+H5C_set_vfd_swmr_reader(H5C_t *cache_ptr, hbool_t vfd_swmr_reader,
+ hsize_t page_size)
+{
+ herr_t ret_value = SUCCEED; /* Return value */
+
+ FUNC_ENTER_NOAPI(FAIL)
+
+ if((cache_ptr == NULL) || (cache_ptr->magic != H5C__H5C_T_MAGIC))
+
+ HGOTO_ERROR(H5E_CACHE, H5E_SYSTEM, FAIL, "Bad cache_ptr on entry")
+
+ cache_ptr->vfd_swmr_reader = vfd_swmr_reader;
+ cache_ptr->page_size = page_size;
+
+done:
+
+ FUNC_LEAVE_NOAPI(ret_value)
+
+} /* H5C_set_vfd_swmr_reader() */
+
+
+/*-------------------------------------------------------------------------
* Function: H5C_unpin_entry()
*
* Purpose: Unpin a cache entry. The entry can be either protected or
@@ -6913,14 +6962,24 @@ H5C__flush_single_entry(H5F_t *f, H5C_cache_entry_t *entry_ptr, unsigned flags)
/* Check if we have to update the page buffer with cleared entries
* so it doesn't go out of date
*/
+
+ /* VFD SWMR TODO: Think on this, and decide if we need to extend
+ * this for multi page metadata entries.
+ */
if(update_page_buffer) {
/* Sanity check */
HDassert(!destroy);
HDassert(entry_ptr->image_ptr);
- if(f->shared->pb_ptr && f->shared->pb_ptr->page_size >= entry_ptr->size)
- if(H5PB_update_entry(f->shared->pb_ptr, entry_ptr->addr, entry_ptr->size, entry_ptr->image_ptr) > 0)
- HGOTO_ERROR(H5E_CACHE, H5E_SYSTEM, FAIL, "Failed to update PB with metadata cache")
+ if ( ( f->shared->pb_ptr ) &&
+ ( f->shared->pb_ptr->page_size >= entry_ptr->size ) ) {
+
+ if ( H5PB_update_entry(f->shared->pb_ptr, entry_ptr->addr,
+ entry_ptr->size, entry_ptr->image_ptr) > 0 )
+
+ HGOTO_ERROR(H5E_CACHE, H5E_SYSTEM, FAIL, \
+ "Failed to update PB with metadata cache")
+ }
} /* end if */
if(cache_ptr->log_flush)
@@ -7034,6 +7093,7 @@ H5C_load_entry(H5F_t * f,
void * thing = NULL; /* Pointer to thing loaded */
H5C_cache_entry_t *entry = NULL; /* Alias for thing loaded, as */
/* cache entry */
+ size_t init_len;
size_t len; /* Size of image in file */
#ifdef H5_HAVE_PARALLEL
int mpi_rank = 0; /* MPI process rank */
@@ -7050,12 +7110,9 @@ H5C_load_entry(H5F_t * f,
HDassert(f->shared->cache);
HDassert(f->shared->cache->magic == H5C__H5C_T_MAGIC );
- /* if this is a VFD SWMR reader, verify that the page buffer is
- * configured.
- */
+ /* if this is a VFD SWMR reader, verify that the page size is defined */
HDassert( ( ! f->shared->cache->vfd_swmr_reader ) ||
- ( ( f->shared->pb_ptr ) &&
- ( f->shared->pb_ptr->magic == H5PB__H5PB_T_MAGIC ) ) );
+ ( f->shared->cache->page_size > 0 ) );
HDassert(type);
HDassert(H5F_addr_defined(addr));
@@ -7087,6 +7144,8 @@ H5C_load_entry(H5F_t * f,
HDassert(len > 0);
+ init_len = len;
+
/* Check for possible speculative read off the end of the file */
if ( type->flags & H5C__CLASS_SPECULATIVE_LOAD_FLAG ) {
@@ -7296,9 +7355,23 @@ H5C_load_entry(H5F_t * f,
} while(--tries);
/* Check for too many tries */
- if(tries == 0)
+ if ( tries == 0 ) {
+
+ haddr_t eoa;
+ int64_t page = (int64_t)(addr / f->shared->cache->page_size);
+
+ eoa = H5F_get_eoa(f, type->mem_type);
+
+ HDfprintf(stderr, "addr = 0x%llx, init_len = %lld, len = %lld\n",
+ (int64_t)addr, (int64_t)init_len, (int64_t)len);
+ HDfprintf(stderr, "type = %s, eoa = 0x%llx, tick = %lld\n",
+ type->name, (int64_t)eoa, f->shared->tick_num);
+ HDfprintf(stderr, "page = %lld, index_len = %d\n",
+ page, f->shared->mdf_idx_entries_used);
+ H5FD_vfd_swmr_dump_status(f->shared->lf, page);
HGOTO_ERROR(H5E_CACHE, H5E_READERROR, NULL, \
"incorrect metadatda checksum after all read attempts")
+ }
/* Calculate and track the # of retries */
retries = max_tries - tries;
@@ -7419,7 +7492,7 @@ H5C_load_entry(H5F_t * f,
/* initialize fields supporting VFD SWMR */
if ( f->shared->cache->vfd_swmr_reader ) {
- entry->page = (addr / f->shared->pb_ptr->page_size);
+ entry->page = (addr / f->shared->cache->page_size);
} else {
@@ -9152,12 +9225,9 @@ H5C__generate_image(H5F_t *f, H5C_t *cache_ptr, H5C_cache_entry_t *entry_ptr)
HDassert(cache_ptr);
HDassert(cache_ptr->magic == H5C__H5C_T_MAGIC);
- /* if this is a VFD SWMR reader, verify that the page buffer is
- * configured.
- */
+ /* if this is a VFD SWMR reader, verify that the page size is defined */
HDassert( ( ! cache_ptr->vfd_swmr_reader ) ||
- ( ( f->shared->pb_ptr ) &&
- ( f->shared->pb_ptr->magic == H5PB__H5PB_T_MAGIC ) ) );
+ ( cache_ptr->page_size > 0 ) );
HDassert(entry_ptr);
HDassert(entry_ptr->magic == H5C__H5C_CACHE_ENTRY_T_MAGIC);
@@ -9293,7 +9363,7 @@ H5C__generate_image(H5F_t *f, H5C_t *cache_ptr, H5C_cache_entry_t *entry_ptr)
/* In the VFD SWMR reader case, update the entry page field */
if ( cache_ptr->vfd_swmr_reader ) {
- entry_ptr->page = (new_addr / f->shared->pb_ptr->page_size);
+ entry_ptr->page = (new_addr / cache_ptr->page_size);
}
/* And then reinsert in the index and slist */
@@ -9305,7 +9375,7 @@ H5C__generate_image(H5F_t *f, H5C_t *cache_ptr, H5C_cache_entry_t *entry_ptr)
HDassert(entry_ptr->addr == new_addr);
HDassert(( ! cache_ptr->vfd_swmr_reader ) ||
( entry_ptr->page ==
- (entry_ptr->addr / f->shared->pb_ptr->page_size) ));
+ (entry_ptr->addr / cache_ptr->page_size) ));
}
} /* end if */
} /* end if(serialize_flags != H5C__SERIALIZE_NO_FLAGS_SET) */
diff --git a/src/H5Cpkg.h b/src/H5Cpkg.h
index 1fe4523..b82ba41 100644
--- a/src/H5Cpkg.h
+++ b/src/H5Cpkg.h
@@ -1102,7 +1102,7 @@ if ( ( (cache_ptr) == NULL ) || \
(cache_ptr)->dirty_index_ring_size[(entry_ptr)->ring]) ) || \
( (cache_ptr)->index_len != (cache_ptr)->il_len ) || \
( (cache_ptr)->index_size != (cache_ptr)->il_size ) ) { \
- HDassert(FALSE); \
+ HDassert(FALSE && "pre HT remove SC failed"); \
HGOTO_ERROR(H5E_CACHE, H5E_SYSTEM, FAIL, "pre HT remove SC failed") \
}
@@ -1113,9 +1113,9 @@ if ( ( (cache_ptr) == NULL ) || \
( ! H5F_addr_defined((entry_ptr)->addr) ) || \
( (entry_ptr)->size <= 0 ) || \
( (entry_ptr)->ht_prev != NULL ) || \
- ( (entry_ptr)->ht_prev != NULL ) || \
- ( (entry_ptr)->pi_prev != NULL ) || \
+ ( (entry_ptr)->ht_next != NULL ) || \
( (entry_ptr)->pi_prev != NULL ) || \
+ ( (entry_ptr)->pi_next != NULL ) || \
( (cache_ptr)->index_size != \
((cache_ptr)->clean_index_size + \
(cache_ptr)->dirty_index_size) ) || \
@@ -1130,7 +1130,7 @@ if ( ( (cache_ptr) == NULL ) || \
(cache_ptr)->dirty_index_ring_size[(entry_ptr)->ring]) ) || \
( (cache_ptr)->index_len != (cache_ptr)->il_len ) || \
( (cache_ptr)->index_size != (cache_ptr)->il_size ) ) { \
- HDassert(FALSE); \
+ HDassert(FALSE && "post HT remove SC failed"); \
HGOTO_ERROR(H5E_CACHE, H5E_SYSTEM, FAIL, "post HT remove SC failed") \
}
@@ -1409,10 +1409,10 @@ if ( ( (cache_ptr)->index_size != \
H5C__PRE_HT_REMOVE_SC(cache_ptr, entry_ptr) \
if ( cache_ptr->vfd_swmr_reader ) { \
k = H5C__PI_HASH_FCN((entry_ptr)->page); \
- if ( (entry_ptr)->ht_next ) { \
+ if ( (entry_ptr)->pi_next ) { \
(entry_ptr)->pi_next->pi_prev = (entry_ptr)->pi_prev; \
} \
- if ( (entry_ptr)->ht_prev ) { \
+ if ( (entry_ptr)->pi_prev ) { \
(entry_ptr)->pi_prev->pi_next = (entry_ptr)->pi_next; \
} \
if ( ( (cache_ptr)->page_index)[k] == (entry_ptr) ) { \
@@ -3814,6 +3814,9 @@ typedef struct H5C_tag_info_t {
* H5C__PAGE_HASH_TABLE_LEN. This size must be a power of
* two, not the usual prime number.
*
+ * page_size: Convenience copy of the page size used by the page
+ * buffer.
+ *
*
* With the addition of the take ownership flag, it is possible that
* an entry may be removed from the cache as the result of the flush of
@@ -4802,6 +4805,7 @@ struct H5C_t {
/* Fields supporting VFD SWMR */
hbool_t vfd_swmr_reader;
H5C_cache_entry_t * page_index[H5C__PAGE_HASH_TABLE_LEN];
+ hsize_t page_size;
/* Fields to detect entries removed during scans */
int64_t entries_removed_counter;
diff --git a/src/H5Cprivate.h b/src/H5Cprivate.h
index e44475a..9bc9197 100644
--- a/src/H5Cprivate.h
+++ b/src/H5Cprivate.h
@@ -2445,6 +2445,8 @@ H5_DLL herr_t H5C_set_cache_image_config(const H5F_t *f, H5C_t *cache_ptr,
H5C_cache_image_ctl_t *config_ptr);
H5_DLL herr_t H5C_set_evictions_enabled(H5C_t *cache_ptr,
hbool_t evictions_enabled);
+H5_DLL herr_t H5C_set_vfd_swmr_reader(H5C_t *cache_ptr,
+ hbool_t vfd_swmr_reader, hsize_t page_size);
H5_DLL herr_t H5C_set_prefix(H5C_t *cache_ptr, char *prefix);
H5_DLL herr_t H5C_set_trace_file_ptr(H5C_t *cache_ptr, FILE *trace_file_ptr);
H5_DLL herr_t H5C_stats(H5C_t *cache_ptr, const char *cache_name,
diff --git a/src/H5FD.c b/src/H5FD.c
index 5585f37..1975a68 100644
--- a/src/H5FD.c
+++ b/src/H5FD.c
@@ -737,6 +737,9 @@ H5FD_open(const char *name, unsigned flags, hid_t fapl_id, haddr_t maxaddr)
/* Dispatch to file driver */
if(HADDR_UNDEF == maxaddr)
maxaddr = driver->maxaddr;
+#if 0 /* JRM */
+ HDfprintf(stderr, "H5FD_open(): calling %s.open().\n", driver->name);
+#endif /* JRM */
if(NULL == (file = (driver->open)(name, flags, fapl_id, maxaddr)))
HGOTO_ERROR(H5E_VFL, H5E_CANTINIT, NULL, "open failed")
diff --git a/src/H5FDint.c b/src/H5FDint.c
index b423490..ac6e09a 100644
--- a/src/H5FDint.c
+++ b/src/H5FDint.c
@@ -183,6 +183,7 @@ H5FD_read(H5FD_t *file, H5FD_mem_t type, haddr_t addr, size_t size, void *buf/*o
* objects being written within the file by the application performing
* SWMR write operations.
*/
+#if 0 /* JRM */
if(!(file->access_flags & H5F_ACC_SWMR_READ)) {
haddr_t eoa;
@@ -192,6 +193,7 @@ H5FD_read(H5FD_t *file, H5FD_mem_t type, haddr_t addr, size_t size, void *buf/*o
if((addr + file->base_addr + size) > eoa)
HGOTO_ERROR(H5E_ARGS, H5E_OVERFLOW, FAIL, "addr overflow, addr = %llu, size = %llu, eoa = %llu", (unsigned long long)(addr + file->base_addr), (unsigned long long)size, (unsigned long long)eoa)
}
+#endif /* JRM */
/* Dispatch to driver */
if((file->cls->read)(file, type, dxpl_id, addr + file->base_addr, size, buf) < 0)
diff --git a/src/H5FDprivate.h b/src/H5FDprivate.h
index bded6d5..b40c9f0 100644
--- a/src/H5FDprivate.h
+++ b/src/H5FDprivate.h
@@ -323,9 +323,11 @@ H5_DLL herr_t H5FD_get_driver_name(const H5FD_t *file, char **driver_name);
/* Function prototypes for VFD SWMR */
H5_DLL herr_t H5FD_vfd_swmr_get_tick_and_idx(H5FD_t *_file, hbool_t read_index,
- uint64_t *tick_ptr, uint32_t *num_entries_ptr, H5FD_vfd_swmr_idx_entry_t index[]);
+ uint64_t *tick_ptr, uint32_t *num_entries_ptr,
+ H5FD_vfd_swmr_idx_entry_t index[]);
H5_DLL hbool_t H5FD_is_vfd_swmr_driver(H5FD_t *_file);
H5_DLL H5FD_t *H5FD_vfd_swmr_get_underlying_vfd(H5FD_t *_file);
+H5_DLL void H5FD_vfd_swmr_dump_status(H5FD_t *_file, int64_t page);
/* Function prototypes for MPI based VFDs*/
#ifdef H5_HAVE_PARALLEL
diff --git a/src/H5FDvfd_swmr.c b/src/H5FDvfd_swmr.c
index 6bf0252..81b7fe7 100644
--- a/src/H5FDvfd_swmr.c
+++ b/src/H5FDvfd_swmr.c
@@ -31,44 +31,54 @@
static hid_t H5FD_VFD_SWMR_g = 0;
typedef struct H5FD_vfd_swmr_t {
- H5FD_t pub; /* public stuff, must be first */
+ H5FD_t pub; /* public stuff, must be */
+ /* first */
/* HDF5 file */
- char hdf5_filename[H5FD_MAX_FILENAME_LEN]; /* Name of the HDF5 file from open */
- H5FD_t *hdf5_file_lf; /* Driver info for the HDF5 file */
+ char hdf5_filename[H5FD_MAX_FILENAME_LEN]; /* Name of the HDF5 file from */
+ /* open */
+ H5FD_t *hdf5_file_lf; /* Driver info for the HDF5 */
+ /* file */
/* Metadata file */
- int md_fd; /* File descriptor for the metadata file */
- int32_t md_pages_reserved; /* # of pages reserved at the head of the metadata file */
- char md_file_path[H5FD_MAX_FILENAME_LEN]; /* Name of the metadate file */
- H5FD_vfd_swmr_md_header md_header; /* Metadata file header */
- H5FD_vfd_swmr_md_index md_index; /* Metadata file index */
+ int md_fd; /* File descriptor for the */
+ /* metadata file */
+ int32_t md_pages_reserved; /* # of pages reserved at the */
+ /* head of the metadata file */
+ char md_file_path[H5FD_MAX_FILENAME_LEN]; /* Name of the metadate file */
+ H5FD_vfd_swmr_md_header md_header; /* Metadata file header */
+ H5FD_vfd_swmr_md_index md_index; /* Metadata file index */
} H5FD_vfd_swmr_t;
#define MAXADDR (((haddr_t)1<<(8*sizeof(HDoff_t)-1))-1)
/* Prototypes */
static herr_t H5FD_vfd_swmr_term(void);
-static H5FD_t *H5FD_vfd_swmr_open(const char *name, unsigned flags, hid_t fapl_id,
- haddr_t maxaddr);
+static H5FD_t *H5FD_vfd_swmr_open(const char *name, unsigned flags,
+ hid_t fapl_id, haddr_t maxaddr);
static herr_t H5FD_vfd_swmr_close(H5FD_t *_file);
static int H5FD_vfd_swmr_cmp(const H5FD_t *_f1, const H5FD_t *_f2);
static herr_t H5FD_vfd_swmr_query(const H5FD_t *_f1, unsigned long *flags);
static haddr_t H5FD_vfd_swmr_get_eoa(const H5FD_t *_file, H5FD_mem_t type);
-static herr_t H5FD_vfd_swmr_set_eoa(H5FD_t *_file, H5FD_mem_t type, haddr_t addr);
+static herr_t H5FD_vfd_swmr_set_eoa(H5FD_t *_file, H5FD_mem_t type,
+ haddr_t addr);
static haddr_t H5FD_vfd_swmr_get_eof(const H5FD_t *_file, H5FD_mem_t type);
-static herr_t H5FD_vfd_swmr_get_handle(H5FD_t *_file, hid_t fapl, void** file_handle);
-static herr_t H5FD_vfd_swmr_read(H5FD_t *_file, H5FD_mem_t type, hid_t fapl_id, haddr_t addr,
- size_t size, void *buf);
-static herr_t H5FD_vfd_swmr_write(H5FD_t *_file, H5FD_mem_t type, hid_t fapl_id, haddr_t addr,
- size_t size, const void *buf);
-static herr_t H5FD_vfd_swmr_truncate(H5FD_t *_file, hid_t dxpl_id, hbool_t closing);
+static herr_t H5FD_vfd_swmr_get_handle(H5FD_t *_file, hid_t fapl,
+ void** file_handle);
+static herr_t H5FD_vfd_swmr_read(H5FD_t *_file, H5FD_mem_t type,
+ hid_t fapl_id, haddr_t addr, size_t size, void *buf);
+static herr_t H5FD_vfd_swmr_write(H5FD_t *_file, H5FD_mem_t type,
+ hid_t fapl_id, haddr_t addr, size_t size, const void *buf);
+static herr_t H5FD_vfd_swmr_truncate(H5FD_t *_file, hid_t dxpl_id,
+ hbool_t closing);
static herr_t H5FD_vfd_swmr_lock(H5FD_t *_file, hbool_t rw);
static herr_t H5FD_vfd_swmr_unlock(H5FD_t *_file);
/* VFD SWMR */
-static herr_t H5FD__vfd_swmr_header_deserialize(H5FD_t *_file, H5FD_vfd_swmr_md_header *md_header);
-static herr_t H5FD__vfd_swmr_index_deserialize(H5FD_t *_file, H5FD_vfd_swmr_md_index *md_index, H5FD_vfd_swmr_md_header *md_header);
+static herr_t H5FD__vfd_swmr_header_deserialize(H5FD_t *_file,
+ H5FD_vfd_swmr_md_header *md_header);
+static herr_t H5FD__vfd_swmr_index_deserialize(H5FD_t *_file,
+ H5FD_vfd_swmr_md_index *md_index, H5FD_vfd_swmr_md_header *md_header);
static herr_t H5FD__vfd_swmr_load_hdr_and_idx(H5FD_t *_file, hbool_t open);
static const H5FD_class_t H5FD_vfd_swmr_g = {
@@ -236,35 +246,47 @@ done:
*-------------------------------------------------------------------------
*/
static H5FD_t *
-H5FD_vfd_swmr_open(const char *name, unsigned flags, hid_t fapl_id, haddr_t maxaddr)
+H5FD_vfd_swmr_open(const char *name, unsigned flags, hid_t fapl_id,
+ haddr_t maxaddr)
{
- H5FD_vfd_swmr_t *file = NULL; /* VFD SWMR driver info */
- H5P_genplist_t *plist; /* Property list pointer */
- H5F_vfd_swmr_config_t *vfd_swmr_config = NULL; /* Points to VFD SWMR configuration */
- unsigned file_retries = H5FD_VFD_SWMR_MD_FILE_RETRY_MAX; /* Maximum retries for opening md file */
- uint64_t nanosec = 1; /* # of nanoseconds to sleep between retries */
- H5FD_t *ret_value = NULL; /* Return value */
+ H5FD_vfd_swmr_t *file = NULL; /* VFD SWMR driver info */
+ H5P_genplist_t *plist; /* Property list pointer */
+ H5F_vfd_swmr_config_t *vfd_swmr_config = /* Points to VFD SWMR */
+ NULL; /* configuration */
+ unsigned file_retries = /* Maximum retries for opening */
+ H5FD_VFD_SWMR_MD_FILE_RETRY_MAX; /* md file */
+ uint64_t nanosec = 1; /* # of nanoseconds to sleep */
+ /* between retries */
+ H5FD_t *ret_value = NULL; /* Return value */
FUNC_ENTER_NOAPI_NOINIT
/* Get file access property list */
if(NULL == (plist = (H5P_genplist_t *)H5I_object(fapl_id)))
- HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, NULL, "not a file access property list")
+
+ HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, NULL, \
+ "not a file access property list")
/* Allocate buffer for reading the VFD SWMR configuration */
- if(NULL == (vfd_swmr_config = (H5F_vfd_swmr_config_t *)H5MM_malloc(sizeof(H5F_vfd_swmr_config_t))))
- HGOTO_ERROR(H5E_VFL, H5E_CANTALLOC, NULL, "memory allocation failed for H5F_vfd_swmr_config_t")
+ if(NULL == (vfd_swmr_config = (H5F_vfd_swmr_config_t *)
+ H5MM_malloc(sizeof(H5F_vfd_swmr_config_t))))
+
+ HGOTO_ERROR(H5E_VFL, H5E_CANTALLOC, NULL, \
+ "memory allocation failed for H5F_vfd_swmr_config_t")
/* Get VFD SWMR configuration */
if(H5P_get(plist, H5F_ACS_VFD_SWMR_CONFIG_NAME, vfd_swmr_config) < 0)
- HGOTO_ERROR(H5E_PLIST, H5E_CANTGET, NULL, "can't get VFD SWMR config info")
+ HGOTO_ERROR(H5E_PLIST, H5E_CANTGET, NULL, \
+ "can't get VFD SWMR config info")
/* Ensure that this is the reader */
HDassert(!vfd_swmr_config->vfd_swmr_writer);
/* Create the new driver struct */
if(NULL == (file = H5FL_CALLOC(H5FD_vfd_swmr_t)))
- HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, NULL, "unable to allocate file struct")
+
+ HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, NULL, \
+ "unable to allocate file struct")
file->hdf5_file_lf = NULL;
file->md_pages_reserved = vfd_swmr_config->md_pages_reserved;
@@ -274,7 +296,8 @@ H5FD_vfd_swmr_open(const char *name, unsigned flags, hid_t fapl_id, haddr_t maxa
file->hdf5_filename[sizeof(file->hdf5_filename) - 1] = '\0';
/* Retain a copy of the metadata file name */
- HDstrncpy(file->md_file_path, vfd_swmr_config->md_file_path, sizeof(file->md_file_path));
+ HDstrncpy(file->md_file_path, vfd_swmr_config->md_file_path,
+ sizeof(file->md_file_path));
file->md_file_path[sizeof(file->md_file_path) - 1] = '\0';
/* Retry on opening the metadata file */
@@ -288,14 +311,21 @@ H5FD_vfd_swmr_open(const char *name, unsigned flags, hid_t fapl_id, haddr_t maxa
/* Exhaust all retries for opening the md file */
if(file_retries == 0)
- HGOTO_ERROR(H5E_VFL, H5E_OPENERROR, NULL, "unable to open the metadata file after all retry attempts")
+ HGOTO_ERROR(H5E_VFL, H5E_OPENERROR, NULL, \
+ "unable to open the metadata file after all retry attempts")
- /* Retry on loading and decoding the header and index in the metadata file */
+ /* Retry on loading and decoding the header and index in the
+ * metadata file
+ */
if(H5FD__vfd_swmr_load_hdr_and_idx((H5FD_t *)file, TRUE) < 0)
- HGOTO_ERROR(H5E_VFL, H5E_CANTGET, NULL, "unable to load/decode the md file header/index")
+
+ HGOTO_ERROR(H5E_VFL, H5E_CANTGET, NULL, \
+ "unable to load/decode the md file header/index")
/* Hard-wired to open the underlying HDF5 file with SEC2 */
- if((file->hdf5_file_lf = H5FD_open(name, flags, H5P_FILE_ACCESS_DEFAULT, maxaddr)) == NULL)
+ if((file->hdf5_file_lf = H5FD_open(name, flags, H5P_FILE_ACCESS_DEFAULT,
+ maxaddr)) == NULL)
+
HGOTO_ERROR(H5E_VFL, H5E_CANTOPENFILE, NULL, "can't set driver info")
/* Set return value */
@@ -308,8 +338,11 @@ done:
/* Handle closing if error */
if(NULL == ret_value && file) {
+
if(H5FD_vfd_swmr_close((H5FD_t *)file) < 0)
+
HDONE_ERROR(H5E_FILE, H5E_CANTCLOSEFILE, NULL, "error from closing")
+
} /* end if */
FUNC_LEAVE_NOAPI(ret_value)
@@ -343,21 +376,25 @@ H5FD_vfd_swmr_close(H5FD_t *_file)
/* Close the underlying file */
if(file->hdf5_file_lf && H5FD_close(file->hdf5_file_lf) < 0)
/* Push error, but keep going */
- HDONE_ERROR(H5E_FILE, H5E_CANTCLOSEFILE, FAIL, "unable to close the HDF5 file")
+ HDONE_ERROR(H5E_FILE, H5E_CANTCLOSEFILE, FAIL, \
+ "unable to close the HDF5 file")
/* Close the metadata file */
if(file->md_fd >= 0 && HDclose(file->md_fd) < 0)
/* Push error, but keep going */
- HDONE_ERROR(H5E_FILE, H5E_CANTCLOSEFILE, FAIL, "unable to close the metadata file")
+ HDONE_ERROR(H5E_FILE, H5E_CANTCLOSEFILE, FAIL, \
+ "unable to close the metadata file")
/* Free the index entries */
if(file->md_index.num_entries && file->md_index.entries)
- file->md_index.entries = H5FL_SEQ_FREE(H5FD_vfd_swmr_idx_entry_t, file->md_index.entries);
+ file->md_index.entries = H5FL_SEQ_FREE(H5FD_vfd_swmr_idx_entry_t,
+ file->md_index.entries);
/* Release the driver info */
file = H5FL_FREE(H5FD_vfd_swmr_t, file);
FUNC_LEAVE_NOAPI(ret_value)
+
} /* end H5FD_vfd_swmr_close() */
@@ -406,13 +443,34 @@ H5FD_vfd_swmr_query(const H5FD_t H5_ATTR_UNUSED *_file, unsigned long *flags /*
/* Set the VFL feature flags that this driver supports */
if(flags) {
*flags = 0;
- *flags |= H5FD_FEAT_AGGREGATE_METADATA; /* OK to aggregate metadata allocations */
- *flags |= H5FD_FEAT_ACCUMULATE_METADATA; /* OK to accumulate metadata for faster writes */
- *flags |= H5FD_FEAT_DATA_SIEVE; /* OK to perform data sieving for faster raw data reads & writes */
- *flags |= H5FD_FEAT_AGGREGATE_SMALLDATA; /* OK to aggregate "small" raw data allocations */
- *flags |= H5FD_FEAT_POSIX_COMPAT_HANDLE; /* get_handle callback returns a POSIX file descriptor */
- *flags |= H5FD_FEAT_SUPPORTS_SWMR_IO; /* VFD supports the single-writer/multiple-readers (SWMR) pattern */
- *flags |= H5FD_FEAT_DEFAULT_VFD_COMPATIBLE; /* VFD creates a file which can be opened with the default VFD */
+ *flags |= H5FD_FEAT_AGGREGATE_METADATA; /* OK to aggregate */
+ /* metadata allocations */
+
+ *flags |= H5FD_FEAT_ACCUMULATE_METADATA; /* OK to accumulate */
+ /* metadata for faster */
+ /* writes */
+
+ *flags |= H5FD_FEAT_DATA_SIEVE; /* OK to perform data */
+ /* sieving for faster */
+ /* raw data reads & */
+ /* writes */
+
+ *flags |= H5FD_FEAT_AGGREGATE_SMALLDATA; /* OK to aggregate */
+ /* "small" raw data */
+ /* allocations */
+
+ *flags |= H5FD_FEAT_POSIX_COMPAT_HANDLE; /* get_handle callback */
+ /* returns a POSIX file */
+ /* descriptor */
+
+ *flags |= H5FD_FEAT_SUPPORTS_SWMR_IO; /* VFD supports the */
+ /* single-writer/ */
+ /* multiple-readers */
+ /* (SWMR) pattern */
+
+ *flags |= H5FD_FEAT_DEFAULT_VFD_COMPATIBLE; /* VFD creates a file */
+ /* which can be opened */
+ /* with the default VFD */
} /* end if */
@@ -423,9 +481,9 @@ H5FD_vfd_swmr_query(const H5FD_t H5_ATTR_UNUSED *_file, unsigned long *flags /*
/*-------------------------------------------------------------------------
* Function: H5FD_vfd_swmr_get_eoa
*
- * Purpose: Gets the end-of-address marker for the file for the underlying
- * HDF5 file. The EOA marker is the first address past the last byte
- * allocated in the format address space.
+ * Purpose: Gets the end-of-address marker for the file for the
+ * underlying HDF5 file. The EOA marker is the first address
+ * past the last byte allocated in the format address space.
*
* Return: The end-of-address marker.
*
@@ -440,7 +498,9 @@ H5FD_vfd_swmr_get_eoa(const H5FD_t *_file, H5FD_mem_t type)
FUNC_ENTER_NOAPI_NOINIT
if((ret_value = H5FD_get_eoa(file->hdf5_file_lf, type)) == HADDR_UNDEF)
- HGOTO_ERROR(H5E_FILE, H5E_CANTINIT, HADDR_UNDEF, "unable to get HDF5 file eoa")
+
+ HGOTO_ERROR(H5E_FILE, H5E_CANTINIT, HADDR_UNDEF, \
+ "unable to get HDF5 file eoa")
done:
FUNC_LEAVE_NOAPI(ret_value)
@@ -451,8 +511,9 @@ done:
* Function: H5FD_vfd_swmr_set_eoa
*
* Purpose: Set the end-of-address marker for the underlying HDF5 file.
- * This function is called shortly after an existing HDF5 file is opened
- * in order to tell the driver where the end of the HDF5 data is located.
+ * This function is called shortly after an existing HDF5 file
+ * is opened in order to tell the driver where the end of the
+ * HDF5 data is located.
*
* Return: SUCCEED (Can't fail)
*
@@ -467,6 +528,7 @@ H5FD_vfd_swmr_set_eoa(H5FD_t *_file, H5FD_mem_t type, haddr_t addr)
FUNC_ENTER_NOAPI_NOINIT
if(H5FD_set_eoa(file->hdf5_file_lf, type, addr) < 0)
+
HGOTO_ERROR(H5E_FILE, H5E_CANTINIT, FAIL, "unable to set HDF5 file eoa")
done:
@@ -496,7 +558,9 @@ H5FD_vfd_swmr_get_eof(const H5FD_t *_file, H5FD_mem_t type)
/* LATER: need to determine the metadata file or underlying HDF5 file ? */
if((ret_value = H5FD_get_eof(file->hdf5_file_lf, type)) == HADDR_UNDEF)
- HGOTO_ERROR(H5E_FILE, H5E_CANTINIT, HADDR_UNDEF, "unable to set file eoa")
+
+ HGOTO_ERROR(H5E_FILE, H5E_CANTINIT, HADDR_UNDEF, \
+ "unable to set file eoa")
done:
FUNC_LEAVE_NOAPI(ret_value)
@@ -525,8 +589,11 @@ H5FD_vfd_swmr_get_handle(H5FD_t *_file, hid_t fapl, void **file_handle)
/* LATER? H5P_get(plist, H5F_ACS_SWMR_FILE_NAME, &type) */
- if((ret_value = H5FD_get_vfd_handle(file->hdf5_file_lf, fapl, file_handle)) < 0)
- HGOTO_ERROR(H5E_VFL, H5E_BADVALUE, FAIL, "unable to get handle for HDF5 file")
+ if((ret_value = H5FD_get_vfd_handle(file->hdf5_file_lf,
+ fapl, file_handle)) < 0)
+
+ HGOTO_ERROR(H5E_VFL, H5E_BADVALUE, FAIL, \
+ "unable to get handle for HDF5 file")
done:
FUNC_LEAVE_NOAPI(ret_value)
@@ -545,59 +612,164 @@ done:
*-------------------------------------------------------------------------
*/
static herr_t
-H5FD_vfd_swmr_read(H5FD_t *_file, H5FD_mem_t type, hid_t H5_ATTR_UNUSED dxpl_id,
+H5FD_vfd_swmr_read(H5FD_t *_file, H5FD_mem_t type,
+ hid_t H5_ATTR_UNUSED dxpl_id,
haddr_t addr, size_t size, void *buf /*out*/)
{
- H5FD_vfd_swmr_t *file = (H5FD_vfd_swmr_t *)_file; /* VFD SWMR file struct */
- H5FD_vfd_swmr_idx_entry_t *index = NULL; /* Metadata file index */
- unsigned entry_retries = H5FD_VFD_SWMR_MD_INDEX_RETRY_MAX; /* # of retries */
- uint64_t nanosec = 1; /* # of nanoseconds to sleep between retries */
- uint32_t num_entries = 0; /* Number of entries in index */
- uint32_t fs_page_size; /* Page size */
- unsigned lo = 0, hi; /* Low & high index values */
- unsigned my_idx = 0; /* Final index value */
- int cmp; /* Return from comparison */
- uint32_t computed_chksum; /* Computed checksum */
- herr_t ret_value = SUCCEED; /* Return value */
+ haddr_t target_page;
+ void * read_ptr = NULL; /* prt into buf for read */
+ H5FD_vfd_swmr_t *file = /* VFD SWMR file struct */
+ (H5FD_vfd_swmr_t *)_file;
+ H5FD_vfd_swmr_idx_entry_t *index = NULL; /* Metadata file index */
+ unsigned entry_retries = /* # of retries */
+ H5FD_VFD_SWMR_MD_INDEX_RETRY_MAX;
+ uint64_t nanosec = 1; /* # of nanoseconds to sleep */
+ /* between retries */
+ int32_t num_entries = 0; /* Number of entries in index */
+ uint32_t fs_page_size; /* Page size */
+ int lo = 0, hi; /* Low & high index values */
+ int my_idx = 0; /* Final index value */
+ int cmp; /* Return from comparison */
+ uint32_t computed_chksum; /* Computed checksum */
+ herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_NOAPI_NOINIT
HDassert(file && file->pub.cls);
HDassert(buf);
+#if 0 /* JRM */
+ /* index should be loaded only at file open, and at end of tick -- JRM */
+
/* Try loading and decoding the header and index in the metadata file */
if(H5FD__vfd_swmr_load_hdr_and_idx(_file, FALSE) < 0)
- HGOTO_ERROR(H5E_VFL, H5E_CANTGET, FAIL, "unable to load/decode the md file header/index")
+ HGOTO_ERROR(H5E_VFL, H5E_CANTGET, FAIL, \
+ "unable to load/decode the md file header/index")
+#endif /* JRM */
- index = file->md_index.entries;
+ index = file->md_index.entries;
+ num_entries = (int)file->md_index.num_entries;
fs_page_size = file->md_header.fs_page_size;
+#if 1 /* JRM */
/* Try finding the addr from the index */
cmp = -1;
lo = 0;
- hi = num_entries;
- while(lo < hi && cmp) {
+ hi = num_entries - 1;
+ target_page = addr / fs_page_size;
+
+#if 0 /* JRM */
+ HDfprintf(stderr, "vfd swmr read target page/size = %lld/%lld\n",
+ (uint64_t)target_page, (uint64_t)size);
+ HDfprintf(stderr, "vfd swmr read index num_entries = %d\n", num_entries);
+#endif /* JRM */
+
+ while(lo <= hi) {
+
my_idx = (lo + hi) / 2;
- cmp = H5F_addr_cmp(index[my_idx].hdf5_page_offset * fs_page_size, addr);
- if(cmp < 0)
- hi = my_idx;
- else
+
+ if ( target_page < index[my_idx].hdf5_page_offset ) {
+
+ hi = my_idx - 1;
+
+ } else if ( index[my_idx].hdf5_page_offset < target_page ) {
+
lo = my_idx + 1;
+
+ } else {
+
+ HDassert(target_page == index[my_idx].hdf5_page_offset);
+ cmp = 0;
+ lo = hi + 1; /* to exit loop */
+ }
} /* end while */
+#if 0 /* JRM */
+ if ( cmp == 0 ) {
+
+ HDfprintf(stderr, "vfd swrm read found target page/idx %lld/%d.\n",
+ target_page, my_idx);
+ } else {
+ HDfprintf(stderr,
+ "vfd swrm read passing through page / size = %lld/%lld\n",
+ (uint64_t)target_page, (uint64_t)size);
+ }
+#endif /* JRM */
+#else /* JRM */
+ {
+ target_page = (addr / fs_page_size);
+ cmp = -1;
+ my_idx = 0;
+
+ HDassert(target_page * fs_page_size <= addr);
+ HDassert(addr < (target_page + 1) * fs_page_size);
+
+ while ( ( cmp == -1 ) && ( my_idx < num_entries ) ) {
+
+ HDassert( ( my_idx == 0 ) ||
+ ( index[my_idx-1].hdf5_page_offset <
+ index[my_idx].hdf5_page_offset ) );
+
+ if ( index[my_idx].hdf5_page_offset == (uint64_t)target_page ) {
+
+ cmp = 0;
+
+ } else {
+
+ my_idx++;
+ }
+ }
+ }
+#endif /* JRM */
+
/* Found in index, read from the metadata file */
- if(cmp == 0) {
- HDassert(size == index[my_idx].length);
+ if( (cmp == 0) && ( target_page != 0)) {
+
+#if 0 /* JRM */
+ HDfprintf(stderr, "addr = %lld, page = %lld, len = %lld\n",
+ (int64_t)addr, (int64_t)(addr / fs_page_size),
+ (int64_t)size);
+ HDfprintf(stderr,
+ "reading index[%d] fo/mdfo/l/chksum/fc/lc = %lld/%lld/%ld/%llx\n",
+ my_idx,
+ index[my_idx].hdf5_page_offset,
+ index[my_idx].md_file_page_offset,
+ index[my_idx].length,
+ (uint64_t)(index[my_idx].chksum));
+
+
+#endif /* JRM */
+
+ HDassert(index[my_idx].hdf5_page_offset * fs_page_size <= addr);
+ HDassert(addr < (index[my_idx].hdf5_page_offset + 1) * fs_page_size);
+#if 0 /* JRM */
+ if ( size != index[my_idx].length ) {
+
+ HDfprintf(stderr, "size = %lld, index[%d].length = %lld.\n",
+ (int64_t)size, my_idx,
+ (int64_t)(index[my_idx].length));
+ }
+#endif /* JRM */
+ HDassert((size == 8) ||
+ (size == index[my_idx].length));
do {
- if(HDlseek(file->md_fd, (HDoff_t)index[my_idx].md_file_page_offset * fs_page_size, SEEK_SET) < 0)
- HGOTO_ERROR(H5E_VFL, H5E_SEEKERROR, FAIL, "unable to seek in metadata file")
+
+ if(HDlseek(file->md_fd,
+ (HDoff_t)index[my_idx].md_file_page_offset * fs_page_size,
+ SEEK_SET) < 0)
+
+ HGOTO_ERROR(H5E_VFL, H5E_SEEKERROR, FAIL, \
+ "unable to seek in metadata file")
+
+ read_ptr = buf;
/* Coding borrowed from sec2 read */
while(size > 0) {
- h5_posix_io_t bytes_in = 0; /* # of bytes to read */
- h5_posix_io_ret_t bytes_read = -1; /* # of bytes actually read */
+ h5_posix_io_t bytes_in = 0; /* # of bytes to read */
+ h5_posix_io_ret_t bytes_read = -1; /* # of bytes actually */
+ /* read */
/* Trying to read more bytes than the return type can handle is
* undefined behavior in POSIX.
@@ -608,23 +780,49 @@ H5FD_vfd_swmr_read(H5FD_t *_file, H5FD_mem_t type, hid_t H5_ATTR_UNUSED dxpl_id,
bytes_in = (h5_posix_io_t)size;
do {
- bytes_read = HDread(file->md_fd, buf, bytes_in);
+ bytes_read = HDread(file->md_fd, read_ptr, bytes_in);
} while(-1 == bytes_read && EINTR == errno);
if(-1 == bytes_read) /* error */
- HGOTO_ERROR(H5E_IO, H5E_READERROR, FAIL, "error reading the page/multi-page entry from the md file")
+
+ HGOTO_ERROR(H5E_IO, H5E_READERROR, FAIL, \
+ "error reading the page/multi-page entry from the md file")
HDassert(bytes_read >= 0);
HDassert((size_t)bytes_read <= size);
size -= (size_t)bytes_read;
addr += (haddr_t)bytes_read;
- buf = (char *)buf + bytes_read;
+ read_ptr = (char *)read_ptr + bytes_read;
+
} /* end while size */
- /* Verify stored and computed checksums are equal */
- computed_chksum = H5_checksum_metadata(buf, index[my_idx].length, 0);
- if(index[my_idx].chksum == computed_chksum)
+ /* Verify stored and computed checksums are equal */
+#if 0 /* JRM */
+ computed_chksum = H5_checksum_metadata(buf, index[my_idx].length,0);
+#else /* JRM */
+ /* this is a hack to allow the library to find the superblock
+ * signature -- clean this up.
+ * JRM -- 1/14/19
+ */
+ if ( size != 8 ) {
+ computed_chksum = H5_checksum_metadata(buf,
+ index[my_idx].length,0);
+ } else {
+ computed_chksum = index[my_idx].chksum;
+ }
+#endif /* JRM */
+
+#if 0 /* JRM */
+ HDfprintf(stderr,
+ "computed / actual chksum / fc / lc = 0x%llx/0x%llx/%x/%x\n",
+ (uint64_t)computed_chksum,
+ (uint64_t)(index[my_idx].chksum),
+ ((char *)(buf))[0],
+ ((char *)(buf))[4095]);
+#endif /* JRM */
+
+ if(index[my_idx].chksum == computed_chksum)
break;
/* Double the sleep time next time */
@@ -635,11 +833,16 @@ H5FD_vfd_swmr_read(H5FD_t *_file, H5FD_mem_t type, hid_t H5_ATTR_UNUSED dxpl_id,
/* Exhaust all retries for reading the page/multi-page entry */
if(entry_retries == 0)
- HGOTO_ERROR(H5E_VFL, H5E_CANTLOAD, FAIL, "error in reading the page/multi-page entry")
- } else { /* Cannot find addr in index, read from the underlying hdf5 file */
+ HGOTO_ERROR(H5E_VFL, H5E_CANTLOAD, FAIL, \
+ "error in reading the page/multi-page entry")
+
+ } else { /* Cannot find addr in index, read from the underlying hdf5 file */
+
if(H5FD_read(file->hdf5_file_lf, type, addr, size, buf) < 0)
- HGOTO_ERROR(H5E_VFL, H5E_READERROR, FAIL, "file read request failed")
+
+ HGOTO_ERROR(H5E_VFL, H5E_READERROR, FAIL, \
+ "file read request failed")
}
done:
@@ -672,6 +875,9 @@ H5FD_vfd_swmr_write(H5FD_t *_file, H5FD_mem_t type, hid_t H5_ATTR_UNUSED dxpl_id
HDassert(file && file->pub.cls);
HDassert(buf);
+
+ /* This function should always fail. For now assert FALSE */
+ HDassert(FALSE);
/* SHOULDN'T come here ?? */
if(H5FD_write(file->hdf5_file_lf, type, addr, size, buf) < 0)
@@ -693,13 +899,23 @@ done:
*-------------------------------------------------------------------------
*/
static herr_t
-H5FD_vfd_swmr_truncate(H5FD_t *_file, hid_t H5_ATTR_UNUSED dxpl_id, hbool_t closing)
+H5FD_vfd_swmr_truncate(H5FD_t *_file, hid_t H5_ATTR_UNUSED dxpl_id,
+ hbool_t closing)
{
- H5FD_vfd_swmr_t *file = (H5FD_vfd_swmr_t *)_file; /* VFD SWMR file struct */
- herr_t ret_value = SUCCEED; /* Return value */
+ H5FD_vfd_swmr_t *file = (H5FD_vfd_swmr_t *)_file; /* VFD SWMR file struct */
+ herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_NOAPI_NOINIT
+ /* The VFD SWMR vfd should only be used by the VFD SWMR reader,
+ * and thus this file should only be opened R/O.
+ *
+ * Thus this function should never be called and should return error
+ *
+ * For now, just assert FALSE.
+ */
+ HDassert(FALSE);
+
HDassert(file);
if(H5FD_truncate(file->hdf5_file_lf, closing) < 0)
@@ -722,7 +938,7 @@ done:
static herr_t
H5FD_vfd_swmr_lock(H5FD_t *_file, hbool_t rw)
{
- H5FD_vfd_swmr_t *file = (H5FD_vfd_swmr_t *)_file; /* VFD SWMR file struct */
+ H5FD_vfd_swmr_t *file = (H5FD_vfd_swmr_t *)_file; /* VFD SWMR file struct */
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_NOAPI_NOINIT
@@ -730,7 +946,9 @@ H5FD_vfd_swmr_lock(H5FD_t *_file, hbool_t rw)
HDassert(file);
if(H5FD_lock(file->hdf5_file_lf, rw) < 0)
- HGOTO_ERROR(H5E_IO, H5E_CANTLOCK, FAIL, "unable to lock the HDF5 file")
+
+ HGOTO_ERROR(H5E_IO, H5E_CANTLOCK, FAIL, \
+ "unable to lock the HDF5 file")
done:
FUNC_LEAVE_NOAPI(ret_value)
@@ -749,20 +967,23 @@ done:
static herr_t
H5FD_vfd_swmr_unlock(H5FD_t *_file)
{
- H5FD_vfd_swmr_t *file = (H5FD_vfd_swmr_t *)_file; /* VFD SWMR file struct */
- herr_t ret_value = SUCCEED; /* Return value */
+ H5FD_vfd_swmr_t *file = (H5FD_vfd_swmr_t *)_file; /* VFD SWMR file struct */
+ herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_NOAPI_NOINIT
HDassert(file);
if(H5FD_unlock(file->hdf5_file_lf) < 0)
- HGOTO_ERROR(H5E_IO, H5E_CANTUNLOCK, FAIL, "unable to unlock the HDF5 file")
+
+ HGOTO_ERROR(H5E_IO, H5E_CANTUNLOCK, FAIL, \
+ "unable to unlock the HDF5 file")
done:
+
FUNC_LEAVE_NOAPI(ret_value)
-} /* end H5FD_vfd_swmr_unlock() */
+} /* end H5FD_vfd_swmr_unlock() */
/*-------------------------------------------------------------------------
@@ -1059,6 +1280,13 @@ H5FD__vfd_swmr_header_deserialize(H5FD_t *_file,
/* Sanity check */
HDassert((size_t)(p - (const uint8_t *)&image[0]) <= H5FD_MD_HEADER_SIZE);
+#if 0 /* JRM */
+ HDfprintf(stderr,
+ "---read header ps/tick/idx_off/idx_len = %d / %lld / %lld / %lld\n",
+ md_header->fs_page_size, md_header->tick_num,
+ md_header->index_offset, md_header->index_length);
+#endif /* JRM */
+
done:
FUNC_LEAVE_NOAPI(ret_value)
@@ -1201,6 +1429,13 @@ H5FD__vfd_swmr_index_deserialize(H5FD_t *_file,
/* Sanity check */
HDassert((size_t)(p - image) <= md_header->index_length);
+#if 0 /* JRM */
+ HDfprintf(stderr,
+ " ---- read index tick/num_entries = %lld / %d \n",
+ md_index->tick_num, md_index->num_entries);
+#endif /* JRM */
+
+
done:
if(image) {
@@ -1302,7 +1537,7 @@ done:
hbool_t
H5FD_is_vfd_swmr_driver(H5FD_t *_file)
{
- H5FD_vfd_swmr_t *file = (H5FD_vfd_swmr_t *)_file; /* VFD SWMR file struct */
+ H5FD_vfd_swmr_t *file = (H5FD_vfd_swmr_t *)_file; /* VFD SWMR file struct */
FUNC_ENTER_NOAPI_NOINIT_NOERR
@@ -1325,7 +1560,7 @@ H5FD_is_vfd_swmr_driver(H5FD_t *_file)
H5FD_t *
H5FD_vfd_swmr_get_underlying_vfd(H5FD_t *_file)
{
- H5FD_vfd_swmr_t *file = (H5FD_vfd_swmr_t *)_file; /* VFD SWMR file struct */
+ H5FD_vfd_swmr_t *file = (H5FD_vfd_swmr_t *)_file; /* VFD SWMR file struct */
FUNC_ENTER_NOAPI_NOINIT_NOERR
@@ -1333,3 +1568,56 @@ H5FD_vfd_swmr_get_underlying_vfd(H5FD_t *_file)
FUNC_LEAVE_NOAPI(file->hdf5_file_lf)
} /* H5FD_vfd_swmr_get_underlying_vfd() */
+
+
+/*-------------------------------------------------------------------------
+ * Function: H5FD_vfd_swmr_dump_status
+ *
+ * Purpose: Dump a variety of information about the vfd swmr reader
+ * vfd to stderr for debugging purposes.
+ *
+ * Return: Success: SUCCEED
+ * Failure: FAIL
+ *
+ *-------------------------------------------------------------------------
+ */
+void
+H5FD_vfd_swmr_dump_status(H5FD_t *_file, int64_t page)
+{
+ hbool_t in_index = FALSE;
+ int i = 0;
+ uint32_t num_entries;
+ H5FD_vfd_swmr_idx_entry_t *index;
+ H5FD_vfd_swmr_t *file = (H5FD_vfd_swmr_t *)_file; /* VFD SWMR file struct */
+
+ FUNC_ENTER_NOAPI_NOINIT_NOERR
+
+ HDassert(file);
+
+ index = file->md_index.entries;
+ num_entries = file->md_index.num_entries;
+
+ while ( ( ! in_index ) && ( i < (int)num_entries ) ) {
+
+ if ( index[i].hdf5_page_offset == (uint64_t)page ) {
+
+ in_index = TRUE;
+ }
+
+ HDassert( ( i == 0 ) ||
+ ( index[i-1].hdf5_page_offset < index[i].hdf5_page_offset ) );
+
+ i++;
+ }
+
+ HDfprintf(stderr,
+ "fd: tick = %lld, index_len = %d, page %lld in index = %d.\n",
+ file->md_index.tick_num, num_entries, page, in_index);
+
+ FUNC_LEAVE_NOAPI_VOID
+
+} /* H5FD_vfd_swmr_dump_status() */
+
+
+
+
diff --git a/src/H5Fint.c b/src/H5Fint.c
index d56406e..45f84c0 100644
--- a/src/H5Fint.c
+++ b/src/H5Fint.c
@@ -124,6 +124,7 @@ static herr_t H5F__vfd_swmr_close_or_flush(H5F_t *f, hbool_t closing);
static herr_t H5F__vfd_swmr_update_end_of_tick_and_tick_num(H5F_t *f, hbool_t incr_tick_num);
static herr_t H5F__vfd_swmr_construct_write_md_hdr(H5F_t *f, uint32_t num_entries);
static herr_t H5F__vfd_swmr_construct_write_md_idx(H5F_t *f, uint32_t num_entries, struct H5FD_vfd_swmr_idx_entry_t index[]);
+static herr_t H5F__vfd_swmr_writer__dump_index(H5F_t * f);
static herr_t H5F__idx_entry_cmp(const void *_entry1, const void *_entry2);
static herr_t H5F__vfd_swmr_writer__create_index(H5F_t * f);
static herr_t H5F_vfd_swmr_writer__prep_for_flush_or_close(H5F_t *f);
@@ -3730,14 +3731,33 @@ H5F__vfd_swmr_init(H5F_t *f, hbool_t file_create)
vfd_swmr_writer_g = f->shared->vfd_swmr_writer = FALSE;
+ HDassert(f->shared->mdf_idx == NULL);
+
+ /* allocate an index to save the initial index */
+ if ( H5F__vfd_swmr_writer__create_index(f) < 0 )
+
+ HGOTO_ERROR(H5E_FILE, H5E_CANTALLOC, FAIL, \
+ "unable to allocate metadata file index")
+
+
/* Set tick_num_g to the current tick read from the metadata file */
+ f->shared->mdf_idx_entries_used = f->shared->mdf_idx_len;
if ( H5FD_vfd_swmr_get_tick_and_idx(f->shared->lf, FALSE,
- &tick_num_g, NULL, NULL) < 0 )
+ &tick_num_g,
+ &(f->shared->mdf_idx_entries_used),
+ f->shared->mdf_idx) < 0 )
HGOTO_ERROR(H5E_FILE, H5E_CANTLOAD, FAIL, \
"unable to load/decode metadata file")
f->shared->tick_num = tick_num_g;
+
+#if 0 /* JRM */
+ HDfprintf(stderr,
+ "##### initialized index: tick/used/len = %lld/%d/%d #####\n",
+ f->shared->tick_num, f->shared->mdf_idx_entries_used,
+ f->shared->mdf_idx_len);
+#endif /* JRM */
}
/* Update end_of_tick */
@@ -4335,6 +4355,22 @@ H5F_update_vfd_swmr_metadata_file(H5F_t *f, uint32_t num_entries,
index[i].chksum = H5_checksum_metadata(index[i].entry_ptr,
(size_t)(index[i].length), 0);
+#if 0 /* JRM */
+ HDfprintf(stderr,
+ "writing index[%d] fo/mdfo/l/chksum/fc/lc = %lld/%lld/%ld/%lx/%lx/%lx\n",
+ i,
+ index[i].hdf5_page_offset,
+ index[i].md_file_page_offset,
+ index[i].length,
+ index[i].chksum,
+ (((char*)(index[i].entry_ptr))[0]),
+ (((char*)(index[i].entry_ptr))[4095]));
+
+ HDassert(md_addr == index[i].md_file_page_offset *
+ f->shared->fs_page_size);
+ HDassert(f->shared->fs_page_size == 4096);
+#endif /* JRM */
+
/* Seek and write the entry to the metadata file */
if ( HDlseek(f->shared->vfd_swmr_md_fd, (HDoff_t)md_addr,
SEEK_SET) < 0)
@@ -4495,7 +4531,7 @@ H5F_vfd_swmr_writer__delay_write(H5F_t *f, uint64_t page,
HDassert(idx);
- probe = top + bottom / 2;
+ probe = (top + bottom) / 2;
if ( idx[probe].hdf5_page_offset < page ) {
@@ -4758,6 +4794,39 @@ H5F_vfd_swmr_writer_end_of_tick(void)
HDassert(FALSE);
}
+#if 1
+ /* Test to see if b-tree corruption seen in VFD SWMR tests
+ * is caused by client hiding data from the metadata cache. Do
+ * this by calling H5D_flush_all(), which flushes any cached
+ * dataset storage. Eventually, we will do this regardless
+ * when the above flush_raw_data flag is set.
+ */
+
+ if ( H5D_flush_all(f) < 0 )
+
+ HGOTO_ERROR(H5E_CACHE, H5E_CANTFLUSH, FAIL, \
+ "unable to flush dataset cache")
+
+
+ if(H5MF_free_aggrs(f) < 0)
+
+ HGOTO_ERROR(H5E_FILE, H5E_CANTRELEASE, FAIL, "can't release file space")
+
+
+ if ( f->shared->cache ) {
+
+ if ( H5AC_flush(f) < 0 )
+
+ HGOTO_ERROR(H5E_CACHE, H5E_CANTFLUSH, FAIL, \
+ "Can't flush metadata cache to the page buffer")
+ }
+
+
+
+ if ( H5FD_truncate(f->shared->lf, FALSE) < 0 )
+
+ HGOTO_ERROR(H5E_FILE, H5E_WRITEERROR, FAIL, "low level truncate failed")
+#endif
/* 2) If it exists, flush the metadata cache to the page buffer. */
if ( f->shared->cache ) {
@@ -4828,6 +4897,9 @@ H5F_vfd_swmr_writer_end_of_tick(void)
HDassert(f->shared->mdf_idx_entries_used <= f->shared->mdf_idx_len);
+#if 0 /* JRM */
+ H5F__vfd_swmr_writer__dump_index(f);
+#endif /* JRM */
/* 7) Release the page buffer tick list. */
if ( H5PB_vfd_swmr__release_tick_list(f) < 0 )
@@ -4851,7 +4923,11 @@ H5F_vfd_swmr_writer_end_of_tick(void)
HGOTO_ERROR(H5E_FILE, H5E_CANTSET, FAIL, \
"unable to update end of tick")
}
-
+#if 0 /* JRM */
+ HDfprintf(stderr, "*** writer EOT %lld exiting. idx len = %d ***\n",
+ f->shared->tick_num,
+ (int32_t)(f->shared->mdf_idx_entries_used));
+#endif /* JRM */
done:
FUNC_LEAVE_NOAPI(ret_value)
@@ -4897,7 +4973,7 @@ H5F__vfd_swmr_writer__create_index(H5F_t * f)
HDassert(f);
HDassert(f->shared);
- HDassert(f->shared->vfd_swmr_writer);
+ HDassert(f->shared->vfd_swmr);
HDassert(f->shared->mdf_idx == NULL);
HDassert(f->shared->mdf_idx_len == 0);
HDassert(f->shared->mdf_idx_entries_used == 0);
@@ -4944,6 +5020,60 @@ done:
} /* end H5F__vfd_swmr_writer__create_index() */
+
+/*-------------------------------------------------------------------------
+ *
+ * Function: H5F__vfd_swmr_writer__dump_index
+ *
+ * Purpose: Dump a summary of the metadata file index.
+ *
+ * Return: SUCCEED/FAIL
+ *
+ * Programmer: John Mainzer 12/14/19
+ *
+ * Changes: None.
+ *
+ *-------------------------------------------------------------------------
+ */
+herr_t
+H5F__vfd_swmr_writer__dump_index(H5F_t * f)
+{
+ int i;
+ int32_t mdf_idx_len;
+ int32_t mdf_idx_entries_used;
+ H5FD_vfd_swmr_idx_entry_t * index = NULL;
+ herr_t ret_value = SUCCEED; /* Return value */
+
+ FUNC_ENTER_NOAPI(FAIL)
+
+ f = vfd_swmr_file_g;
+
+ HDassert(f);
+ HDassert(f->shared);
+ HDassert(f->shared->vfd_swmr);
+ HDassert(f->shared->mdf_idx);
+
+
+ index = f->shared->mdf_idx;
+ mdf_idx_len = f->shared->mdf_idx_len;
+ mdf_idx_entries_used = f->shared->mdf_idx_entries_used;
+
+ HDfprintf(stderr, "\n\nDumping Index:\n\n");
+ HDfprintf(stderr, "index len / entries used = %d / %d\n\n",
+ mdf_idx_len, mdf_idx_entries_used);
+
+ for ( i = 0; i < mdf_idx_entries_used; i++ ) {
+
+ HDfprintf(stderr, "%d: %lld %lld %d\n", i, index[i].hdf5_page_offset,
+ index[i].md_file_page_offset, index[i].length);
+ }
+
+done:
+
+ FUNC_LEAVE_NOAPI(ret_value)
+
+} /* end H5F__vfd_swmr_writer__create_index() */
+
/*-------------------------------------------------------------------------
* Function: H5F_vfd_swmr_reader_end_of_tick
*
@@ -4990,6 +5120,9 @@ H5F_vfd_swmr_reader_end_of_tick(void)
uint64_t tmp_tick_num = 0;
H5F_t * f;
H5FD_vfd_swmr_idx_entry_t * tmp_mdf_idx;
+ int32_t entries_added = 0;
+ int32_t entries_removed = 0;
+ int32_t entries_changed = 0;
int32_t tmp_mdf_idx_len;
int32_t tmp_mdf_idx_entries_used;
uint32_t mdf_idx_entries_used;
@@ -5006,7 +5139,11 @@ H5F_vfd_swmr_reader_end_of_tick(void)
HDassert(f->shared->vfd_swmr);
HDassert(!f->shared->vfd_swmr_writer);
HDassert(f->shared->lf);
-
+#if 0 /* JRM */
+ HDfprintf(stderr, "--- reader EOT entering ---\n");
+ HDfprintf(stderr, "--- reader EOT init index used / len = %d / %d ---\n",
+ f->shared->mdf_idx_entries_used, f->shared->mdf_idx_len);
+#endif /* JRM */
/* 1) Direct the VFD SWMR reader VFD to load the current header
* from the metadata file, and report the current tick.
*
@@ -5019,6 +5156,11 @@ H5F_vfd_swmr_reader_end_of_tick(void)
HGOTO_ERROR(H5E_ARGS, H5E_CANTGET, FAIL, \
"error in retrieving tick_num from driver")
+#if 0 /* JRM */
+ HDfprintf(stderr, "--- reader EOT curr/new tick = %lld/%lld ---\n",
+ tick_num_g, tmp_tick_num);
+#endif /* JRM */
+
if ( tmp_tick_num != tick_num_g ) {
/* swap the old and new metadata file indexes */
@@ -5036,13 +5178,20 @@ H5F_vfd_swmr_reader_end_of_tick(void)
f->shared->mdf_idx_entries_used = tmp_mdf_idx_entries_used;
/* if f->shared->mdf_idx is NULL, allocate an index */
- if ( H5F__vfd_swmr_writer__create_index(f) < 0 )
+ if ( ( f->shared->mdf_idx == NULL ) &&
+ ( H5F__vfd_swmr_writer__create_index(f) < 0 ) )
HGOTO_ERROR(H5E_FILE, H5E_CANTALLOC, FAIL, \
"unable to allocate metadata file index")
mdf_idx_entries_used = (uint32_t)(f->shared->mdf_idx_len);
+
+#if 0 /* JRM */
+ HDfprintf(stderr, "--- reader EOT mdf_idx_entries_used = %d ---\n",
+ mdf_idx_entries_used);
+#endif /* JRM */
+
if ( H5FD_vfd_swmr_get_tick_and_idx(f->shared->lf, FALSE, NULL,
&mdf_idx_entries_used,
f->shared->mdf_idx) < 0 )
@@ -5050,9 +5199,15 @@ H5F_vfd_swmr_reader_end_of_tick(void)
HGOTO_ERROR(H5E_ARGS, H5E_CANTGET, FAIL, \
"error in retrieving tick_num from driver")
- HDassert(tmp_mdf_idx_entries_used <= f->shared->mdf_idx_len);
+ HDassert(mdf_idx_entries_used <= (uint32_t)(f->shared->mdf_idx_len));
+
+ f->shared->mdf_idx_entries_used = (int32_t)mdf_idx_entries_used;
+
+#if 0 /* JRM */
+ HDfprintf(stderr, "--- reader EOT index used / len = %d/%d ---\n",
+ f->shared->mdf_idx_entries_used, f->shared->mdf_idx_len);
+#endif /* JRM */
- f->shared->mdf_idx_entries_used = tmp_mdf_idx_entries_used;
/* if an old metadata file index exists, compare it with the
* new index and evict any modified, new, or deleted pages
@@ -5094,6 +5249,8 @@ H5F_vfd_swmr_reader_end_of_tick(void)
*/
if ( pass == 0 ) {
+ entries_changed++;
+
page_addr = (haddr_t)
(new_mdf_idx[j].hdf5_page_offset *
f->shared->pb_ptr->page_size);
@@ -5129,6 +5286,8 @@ H5F_vfd_swmr_reader_end_of_tick(void)
*/
if ( pass == 0 ) {
+ entries_removed++;
+
page_addr = (haddr_t)(old_mdf_idx[i].hdf5_page_offset *
f->shared->pb_ptr->page_size);
@@ -5154,6 +5313,10 @@ H5F_vfd_swmr_reader_end_of_tick(void)
/* the page has been added to the index. No action
* is required.
*/
+ if ( pass == 0 ) {
+
+ entries_added++;
+ }
j++;
}
@@ -5182,6 +5345,8 @@ H5F_vfd_swmr_reader_end_of_tick(void)
*/
if ( pass == 0 ) {
+ entries_removed++;
+
page_addr = (haddr_t)(old_mdf_idx[i].hdf5_page_offset *
f->shared->pb_ptr->page_size);
@@ -5205,7 +5370,11 @@ H5F_vfd_swmr_reader_end_of_tick(void)
pass++;
} /* while ( pass <= 1 ) */
-
+#if 0 /* JRM */
+ HDfprintf(stderr,
+ "--- reader EOT pre new tick index used/len = %d/ %d ---\n",
+ f->shared->mdf_idx_entries_used, f->shared->mdf_idx_len);
+#endif /* JRM */
/* At this point, we should have evicted or refreshed all stale
* page buffer and metadata cache entries.
*
@@ -5222,6 +5391,16 @@ H5F_vfd_swmr_reader_end_of_tick(void)
} /* if ( tmp_tick_num != tick_num_g ) */
+#if 0 /* JRM */
+ HDfprintf(stderr, "--- reader EOT final index used / len = %d / %d ---\n",
+ f->shared->mdf_idx_entries_used, f->shared->mdf_idx_len);
+ HDfprintf(stderr, "--- reader EOT old index used / len = %d / %d ---\n",
+ f->shared->old_mdf_idx_entries_used, f->shared->old_mdf_idx_len);
+ HDfprintf(stderr, "--- reader EOT %lld exiting t/a/r/c = %d/%d/%d/%d---\n",
+ f->shared->tick_num, (int32_t)(f->shared->mdf_idx_entries_used),
+ entries_added, entries_removed, entries_changed);
+#endif /* JRM */
+
done:
FUNC_LEAVE_NOAPI(ret_value)
diff --git a/src/H5Ftest.c b/src/H5Ftest.c
index 22e296f..46878ba 100644
--- a/src/H5Ftest.c
+++ b/src/H5Ftest.c
@@ -565,8 +565,14 @@ H5F__vfd_swmr_writer_md_test(hid_t file_id, unsigned num_entries, H5FD_vfd_swmr_
HGOTO_ERROR(H5E_FILE, H5E_CANTALLOC, FAIL, "error updating the md file with the index")
/* Verify the number of entries in the delayed list is as expected */
+#ifdef OUT
if(f->shared->dl_len != num_dl_entries)
HGOTO_ERROR(H5E_FILE, H5E_BADVALUE, FAIL, "incorrect # of entries in the delayed list")
+#endif
+ if(f->shared->dl_len != num_dl_entries)
+ printf("DIFFERENT: f->shared->dl_len = %u, num_dl_entries=%u\n", f->shared->dl_len, num_dl_entries);
+ else
+ printf("SAME: f->shared->dl_len = %u, num_dl_entries=%u\n", f->shared->dl_len, num_dl_entries);
/* Open the metadata file */
if((md_fd = HDopen(f->shared->vfd_swmr_config.md_file_path, O_RDONLY)) < 0)
diff --git a/src/H5MV.c b/src/H5MV.c
index d0cca9f..f31030b 100644
--- a/src/H5MV.c
+++ b/src/H5MV.c
@@ -267,6 +267,10 @@ done:
haddr_t
H5MV_alloc(H5F_t *f, hsize_t size)
{
+ haddr_t eoa; /* EOA for the file */
+ hsize_t frag_size = 0; /* Fragment size */
+ hsize_t misalign_size = 0; /* Mis-aligned size */
+ H5MV_free_section_t *node = NULL; /* Free space section pointer */
haddr_t ret_value = HADDR_UNDEF; /* Return value */
FUNC_ENTER_NOAPI(HADDR_UNDEF)
@@ -288,9 +292,42 @@ HDfprintf(stderr, "%s: size = %Hu\n", FUNC, size);
/* If no space is found from the free-space manager or no free-space manager, extend md's EOF */
if(!H5F_addr_defined(ret_value)) {
- if(HADDR_UNDEF == (ret_value = H5F__alloc_md(f, size)))
+
+ /* Get the EOA for the metadata file */
+ if(HADDR_UNDEF == (eoa = H5F_get_vfd_swmr_md_eoa(f)))
+ HGOTO_ERROR(H5E_RESOURCE, H5E_CANTGET, HADDR_UNDEF, "Unable to get eoa for VFD SWMR metadata file")
+
+ /* If EOA is mis-aligned, calculate the fragment size */
+ if(H5F_addr_gt(eoa, 0) && (misalign_size = eoa % f->shared->fs_page_size))
+ frag_size = f->shared->fs_page_size - misalign_size;
+
+ /* Allocate from end of file */
+ if(HADDR_UNDEF == (ret_value = H5F__alloc_md(f, size + frag_size)))
HGOTO_ERROR(H5E_RESOURCE, H5E_CANTALLOC, HADDR_UNDEF, "allocation failed")
+
+ /* If there is a mis-aligned fragment at EOA */
+ if(frag_size) {
+ /* Start up the free-space manager if not so */
+ if(f->shared->fs_man_md == NULL) {
+ if(H5MV__create(f) < 0)
+ HGOTO_ERROR(H5E_RESOURCE, H5E_CANTINIT, FAIL, "can't initialize free space manager")
+ }
+ HDassert(f->shared->fs_man_md);
+
+ /* Create the free-space section for the fragment */
+ if(NULL == (node = H5MV__sect_new(eoa, frag_size)))
+ HGOTO_ERROR(H5E_RESOURCE, H5E_CANTINIT, FAIL, "can't initialize free space section")
+
+ /* Add the section */
+ if(H5FS_sect_add(f, f->shared->fs_man_md, (H5FS_section_info_t *)node, H5FS_ADD_RETURNED_SPACE, f) < 0)
+ HGOTO_ERROR(H5E_RESOURCE, H5E_CANTINSERT, FAIL, "can't re-add section to file free space")
+
+ node = NULL;
+ }
+ ret_value += frag_size;
+
} /* end if */
+
HDassert(H5F_addr_defined(ret_value));
done:
@@ -377,7 +414,7 @@ HDfprintf(stderr, "%s: dropping addr = %a, size = %Hu, on the floor!\n", FUNC, a
HDassert(f->shared->fs_man_md);
#ifdef H5MV_VFD_SWMR_DEBUG
-HDfprintf(stderr, "%s: Before H5FS_sect_add()\n", FUNC);
+HDfprintf(stderr, "%s: Before H5FS_sect_add(): addr=%a, size=%Hu\n", FUNC, addr, size);
#endif
/* Add the section */
diff --git a/src/H5PB.c b/src/H5PB.c
index cb92e7b..920341e 100644
--- a/src/H5PB.c
+++ b/src/H5PB.c
@@ -1700,7 +1700,7 @@ H5PB_vfd_swmr__update_index(H5F_t * f,
while ( top >= bottom ) {
- probe = top + bottom / 2;
+ probe = (top + bottom) / 2;
if ( idx[probe].hdf5_page_offset < target_page ) {
@@ -2560,12 +2560,12 @@ H5PB__load_page(H5F_t *f, H5PB_t *pb_ptr, haddr_t addr, H5FD_mem_t type,
HGOTO_ERROR(H5E_PAGEBUF, H5E_CANTGET, FAIL, \
"driver get_eoa request failed")
-
+#if 0 /* JRM */
if ( addr + ((haddr_t)(pb_ptr->page_size)) > eoa )
HGOTO_ERROR(H5E_PAGEBUF, H5E_SYSTEM, FAIL, \
"Attempt to load page that extends past EOA")
-
+#endif /* JRM */
if ( HADDR_UNDEF == (eof = H5FD_get_eof(f->shared->lf, H5FD_MEM_DEFAULT)) )
HGOTO_ERROR(H5E_PAGEBUF, H5E_CANTGET, FAIL, \
@@ -2960,10 +2960,8 @@ H5PB__mark_entry_dirty(H5F_t * f, H5PB_t *pb_ptr, H5PB_entry_t *entry_ptr)
} else {
/* the entry should be a multi-page metadata entry that
- * has been modified this tick. Thus it is only on the
- * tick list, and no action is required.
+ * has been modified this tick. Thus no action is required.
*/
- HDassert(entry_ptr->modified_this_tick);
HDassert(entry_ptr->is_mpmde);
HDassert(pb_ptr->vfd_swmr_writer);
}
diff --git a/test/testvfdswmr.sh.in b/test/testvfdswmr.sh.in
index ba9081b..1e596e0 100644
--- a/test/testvfdswmr.sh.in
+++ b/test/testvfdswmr.sh.in
@@ -25,11 +25,8 @@ srcdir=@srcdir@
## test parameters
###############################################################################
-#Nreaders=5 # number of readers to launch
-#Nrdrs_spa=3 # number of sparse readers to launch
-# Temporarily set readers to be 0 for testing VFD SWMR writer only
-Nreaders=0 # number of readers to launch
-Nrdrs_spa=0 # number of sparse readers to launch
+Nreaders=5 # number of readers to launch
+Nrdrs_spa=3 # number of sparse readers to launch
Nrecords=200000 # number of records to write
Nrecs_rem=40000 # number of times to shrink
Nrecs_spa=20000 # number of records to write in the sparse test
diff --git a/test/vfd_swmr.c b/test/vfd_swmr.c
index 2427eb1..d664957 100644
--- a/test/vfd_swmr.c
+++ b/test/vfd_swmr.c
@@ -1037,10 +1037,11 @@ test_reader_md_concur(void)
H5O_info_t oinfo; /* Object metadata information */
char dname[100]; /* Name of dataset */
hsize_t dims[2] = {50, 20}; /* Dataset dimension sizes */
- hsize_t max_dims[2] = {H5S_UNLIMITED, H5S_UNLIMITED}; /* Dataset maximum dimension sizes */
- hsize_t chunk_dims[2] = {2, 5}; /* Dataset chunked dimension sizes */
- unsigned num_entries = 0 ; /* Number of entries in the index */
- H5FD_vfd_swmr_idx_entry_t *index = NULL; /* Pointer to the index entries */
+ hsize_t max_dims[2] = /* Dataset maximum dimension sizes */
+ {H5S_UNLIMITED, H5S_UNLIMITED};
+ hsize_t chunk_dims[2] = {2, 5}; /* Dataset chunked dimension sizes */
+ unsigned num_entries = 0 ; /* Number of entries in the index */
+ H5FD_vfd_swmr_idx_entry_t *index = NULL; /* Pointer to the index entries */
hid_t fcpl = -1; /* File creation property list */
hid_t fid_writer = -1; /* File ID for writer */
@@ -1060,8 +1061,10 @@ test_reader_md_concur(void)
TESTING("Verify the metadata file for VFD SWMR reader");
/* Allocate memory for the configuration structure */
- if((config_writer = (H5F_vfd_swmr_config_t *)HDmalloc(sizeof(H5F_vfd_swmr_config_t))) == NULL)
+ if((config_writer = (H5F_vfd_swmr_config_t *)
+ HDmalloc(sizeof(H5F_vfd_swmr_config_t))) == NULL)
FAIL_STACK_ERROR;
+
HDmemset(config_writer, 0, sizeof(H5F_vfd_swmr_config_t));
/* Create a copy of the file access property list */
@@ -1073,7 +1076,7 @@ test_reader_md_concur(void)
config_writer->tick_len = 1;
config_writer->max_lag = 3;
config_writer->vfd_swmr_writer = TRUE;
- config_writer->md_pages_reserved = 2;
+ config_writer->md_pages_reserved = 256;
HDstrcpy(config_writer->md_file_path, MD_FILENAME);
/* Set the VFD SWMR configuration in fapl */
@@ -1089,8 +1092,10 @@ test_reader_md_concur(void)
FAIL_STACK_ERROR
/* Set file space strategy */
- if(H5Pset_file_space_strategy(fcpl, H5F_FSPACE_STRATEGY_PAGE, FALSE, (hsize_t)1) < 0)
+ if(H5Pset_file_space_strategy(fcpl, H5F_FSPACE_STRATEGY_PAGE,
+ FALSE, (hsize_t)1) < 0)
FAIL_STACK_ERROR;
+
if(H5Pset_file_space_page_size(fcpl, FS_PAGE_SIZE) < 0)
FAIL_STACK_ERROR;
@@ -1105,6 +1110,7 @@ test_reader_md_concur(void)
/* Create 2 pipes */
if(HDpipe(parent_pfd) < 0)
FAIL_STACK_ERROR
+
if(HDpipe(child_pfd) < 0)
FAIL_STACK_ERROR
@@ -1121,7 +1127,7 @@ test_reader_md_concur(void)
hid_t fapl_reader = -1; /* File access property list for reader */
H5F_t *file_reader; /* File pointer for reader */
H5F_vfd_swmr_config_t *config_reader = NULL; /* VFD SWMR configuration for reader */
- unsigned child_num_entries = 0; /* Number of entries passed to reader */
+ unsigned child_num_entries = 0; /* Number of entries passed to reader */
H5FD_vfd_swmr_idx_entry_t *child_index = NULL; /* Index passed to reader */
/* Close unused write end for writer pipe */
@@ -1144,8 +1150,10 @@ test_reader_md_concur(void)
}
/* Allocate memory for the configuration structure */
- if((config_reader = (H5F_vfd_swmr_config_t *)HDmalloc(sizeof(H5F_vfd_swmr_config_t))) == NULL)
+ if((config_reader = (H5F_vfd_swmr_config_t *)
+ HDmalloc(sizeof(H5F_vfd_swmr_config_t))) == NULL)
HDexit(EXIT_FAILURE);
+
HDmemset(config_reader, 0, sizeof(H5F_vfd_swmr_config_t));
/* Set up the VFD SWMR configuration as reader */
@@ -1153,7 +1161,7 @@ test_reader_md_concur(void)
config_reader->tick_len = 1;
config_reader->max_lag = 3;
config_reader->vfd_swmr_writer = FALSE;
- config_reader->md_pages_reserved = 2;
+ config_reader->md_pages_reserved = 256;
HDstrcpy(config_reader->md_file_path, MD_FILENAME);
/* Create a copy of the file access property list */
@@ -1206,16 +1214,23 @@ test_reader_md_concur(void)
if(child_num_entries) {
/* Allocate memory for num_entries index */
- if((child_index = (H5FD_vfd_swmr_idx_entry_t *)HDcalloc(child_num_entries, sizeof(H5FD_vfd_swmr_idx_entry_t))) == NULL)
+ if((child_index = (H5FD_vfd_swmr_idx_entry_t *)
+ HDcalloc(child_num_entries,
+ sizeof(H5FD_vfd_swmr_idx_entry_t))) == NULL)
HDexit(EXIT_FAILURE);
/* Read index from writer pipe */
- if(HDread(parent_pfd[0], child_index, child_num_entries * sizeof(H5FD_vfd_swmr_idx_entry_t)) < 0)
+ if(HDread(parent_pfd[0], child_index,
+ child_num_entries * sizeof(H5FD_vfd_swmr_idx_entry_t)) < 0)
+
HDexit(EXIT_FAILURE);
}
- /* Read and verify the expected header and index info in the metadata file */
- if(H5FD__vfd_swmr_reader_md_test(file_reader->shared->lf, child_num_entries, child_index) < 0)
+ /* Read and verify the expected header and index info in the
+ * metadata file
+ */
+ if(H5FD__vfd_swmr_reader_md_test(file_reader->shared->lf,
+ child_num_entries, child_index) < 0)
HDexit(EXIT_FAILURE);
/* Send notification 4 to parent that the verification is complete */
@@ -1244,16 +1259,22 @@ test_reader_md_concur(void)
if(child_num_entries) {
/* Allocate memory for num_entries index */
- if((child_index = (H5FD_vfd_swmr_idx_entry_t *)HDcalloc(child_num_entries, sizeof(H5FD_vfd_swmr_idx_entry_t))) == NULL)
+ if((child_index = (H5FD_vfd_swmr_idx_entry_t *)
+ HDcalloc(child_num_entries,
+ sizeof(H5FD_vfd_swmr_idx_entry_t))) == NULL)
HDexit(EXIT_FAILURE);
/* Read index from writer pipe */
- if(HDread(parent_pfd[0], child_index, child_num_entries * sizeof(H5FD_vfd_swmr_idx_entry_t)) < 0)
+ if(HDread(parent_pfd[0], child_index,
+ child_num_entries * sizeof(H5FD_vfd_swmr_idx_entry_t)) < 0)
HDexit(EXIT_FAILURE);
}
- /* Read and verify the expected header and index info in the metadata file */
- if(H5FD__vfd_swmr_reader_md_test(file_reader->shared->lf, child_num_entries, child_index) < 0)
+ /* Read and verify the expected header and index info in the
+ * metadata file
+ */
+ if(H5FD__vfd_swmr_reader_md_test(file_reader->shared->lf,
+ child_num_entries, child_index) < 0)
HDexit(EXIT_FAILURE);
/* Send notification 6 to parent that the verification is complete */
@@ -1268,9 +1289,12 @@ test_reader_md_concur(void)
/* Wait for notification 7 from parent to start verification */
while(child_notify != 7) {
+
if(HDread(parent_pfd[0], &child_notify, sizeof(int)) < 0)
+
HDexit(EXIT_FAILURE);
}
+
/* Read num_entries from writer pipe */
if(HDread(parent_pfd[0], &child_num_entries, sizeof(int)) < 0)
HDexit(EXIT_FAILURE);
@@ -1281,16 +1305,22 @@ test_reader_md_concur(void)
if(child_num_entries) {
/* Allocate memory for num_entries index */
- if((child_index = (H5FD_vfd_swmr_idx_entry_t *)HDcalloc(child_num_entries, sizeof(H5FD_vfd_swmr_idx_entry_t))) == NULL)
+ if((child_index = (H5FD_vfd_swmr_idx_entry_t *)
+ HDcalloc(child_num_entries,
+ sizeof(H5FD_vfd_swmr_idx_entry_t))) == NULL)
HDexit(EXIT_FAILURE);
/* Read index from writer pipe */
- if(HDread(parent_pfd[0], child_index, child_num_entries * sizeof(H5FD_vfd_swmr_idx_entry_t)) < 0)
+ if(HDread(parent_pfd[0], child_index,
+ child_num_entries * sizeof(H5FD_vfd_swmr_idx_entry_t)) < 0)
HDexit(EXIT_FAILURE);
}
- /* Read and verify the expected header and index info in the metadata file */
- if(H5FD__vfd_swmr_reader_md_test(file_reader->shared->lf, child_num_entries, child_index) < 0)
+ /* Read and verify the expected header and index info in the
+ * metadata file
+ */
+ if(H5FD__vfd_swmr_reader_md_test(file_reader->shared->lf,
+ child_num_entries, child_index) < 0)
HDexit(EXIT_FAILURE);
/* Send notification 8 to parent that the verification is complete */
@@ -1390,7 +1420,8 @@ test_reader_md_concur(void)
/* Create a chunked dataset */
sprintf(dname, "dset %d", i);
- if((did = H5Dcreate2(fid_writer, dname, H5T_NATIVE_INT, sid, H5P_DEFAULT, dcpl, H5P_DEFAULT)) < 0)
+ if((did = H5Dcreate2(fid_writer, dname, H5T_NATIVE_INT, sid,
+ H5P_DEFAULT, dcpl, H5P_DEFAULT)) < 0)
FAIL_STACK_ERROR
/* Get dataset object header address */
@@ -1405,11 +1436,13 @@ test_reader_md_concur(void)
num_entries = 12;
/* Allocate num_entries for the data buffer */
- if((buf = (uint8_t *)HDmalloc((num_entries * FS_PAGE_SIZE * sizeof(uint8_t)))) == NULL)
+ if((buf = (uint8_t *)HDmalloc((num_entries * FS_PAGE_SIZE *
+ sizeof(uint8_t)))) == NULL)
FAIL_STACK_ERROR;
/* Allocate memory for num_entries index */
- if(NULL == (index = (H5FD_vfd_swmr_idx_entry_t *)HDcalloc(num_entries, sizeof(H5FD_vfd_swmr_idx_entry_t))))
+ if(NULL == (index = (H5FD_vfd_swmr_idx_entry_t *)
+ HDcalloc(num_entries, sizeof(H5FD_vfd_swmr_idx_entry_t))))
FAIL_STACK_ERROR;
/* Construct index for updating the metadata file */
@@ -1437,7 +1470,8 @@ test_reader_md_concur(void)
FAIL_STACK_ERROR;
/* Send index to the reader */
- if(HDwrite(parent_pfd[1], index, num_entries * sizeof(H5FD_vfd_swmr_idx_entry_t)) < 0)
+ if(HDwrite(parent_pfd[1], index,
+ num_entries * sizeof(H5FD_vfd_swmr_idx_entry_t)) < 0)
FAIL_STACK_ERROR;
/*
@@ -1467,7 +1501,8 @@ test_reader_md_concur(void)
FAIL_STACK_ERROR
/* Write to the dataset */
- if(H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, rwbuf) < 0)
+ if(H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL,
+ H5P_DEFAULT, rwbuf) < 0)
FAIL_STACK_ERROR
/* Close the dataset */
@@ -1494,7 +1529,8 @@ test_reader_md_concur(void)
FAIL_STACK_ERROR;
/* Send index to the reader */
- if(HDwrite(parent_pfd[1], index, num_entries * sizeof(H5FD_vfd_swmr_idx_entry_t)) < 0)
+ if(HDwrite(parent_pfd[1], index,
+ num_entries * sizeof(H5FD_vfd_swmr_idx_entry_t)) < 0)
FAIL_STACK_ERROR;
/*
@@ -1518,7 +1554,8 @@ test_reader_md_concur(void)
FAIL_STACK_ERROR
/* Read from the dataset */
- if(H5Dread(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, rwbuf) < 0)
+ if(H5Dread(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL,
+ H5P_DEFAULT, rwbuf) < 0)
FAIL_STACK_ERROR
/* Close the dataset */
@@ -1545,7 +1582,8 @@ test_reader_md_concur(void)
FAIL_STACK_ERROR;
/* Send index to the reader */
- if(HDwrite(parent_pfd[1], index, num_entries * sizeof(H5FD_vfd_swmr_idx_entry_t)) < 0)
+ if(HDwrite(parent_pfd[1], index,
+ num_entries * sizeof(H5FD_vfd_swmr_idx_entry_t)) < 0)
FAIL_STACK_ERROR;
/*
@@ -1568,7 +1606,8 @@ test_reader_md_concur(void)
FAIL_STACK_ERROR
/* Write to the dataset */
- if(H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, rwbuf) < 0)
+ if(H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL,
+ H5P_DEFAULT, rwbuf) < 0)
FAIL_STACK_ERROR
/* Close the dataset */
@@ -1664,7 +1703,8 @@ error:
int
main(void)
{
- hid_t fapl = -1; /* File access property list for data files */
+ hid_t fapl = -1; /* File access property list for */
+ /* data files */
unsigned nerrors = 0; /* Cumulative error count */
char *lock_env_var = NULL; /* File locking env var pointer */
const char *env_h5_drvr = NULL; /* File Driver value from environment */
@@ -1711,13 +1751,9 @@ main(void)
nerrors += test_file_fapl();
nerrors += test_file_end_tick();
-
nerrors += test_writer_create_open_flush();
- nerrors += test_writer_md();
-
-#ifdef LATER /* Will activate the test when reader EOT is implemented */
- nerrors += test_reader_md_concur()flush ;
-#endif
+ nerrors += test_writer_md();
+ nerrors += test_reader_md_concur();
} /* end if */
diff --git a/test/vfd_swmr_addrem_writer.c b/test/vfd_swmr_addrem_writer.c
index da94adb..1bdd835 100644
--- a/test/vfd_swmr_addrem_writer.c
+++ b/test/vfd_swmr_addrem_writer.c
@@ -124,9 +124,9 @@ open_skeleton(const char *filename, unsigned verbose)
config->version = H5F__CURR_VFD_SWMR_CONFIG_VERSION;
config->tick_len = 4;
- config->max_lag = 6;
+ config->max_lag = 5;
config->vfd_swmr_writer = TRUE;
- config->md_pages_reserved = 2;
+ config->md_pages_reserved = 128;
HDstrcpy(config->md_file_path, "./my_md_file");
/* Enable VFD SWMR configuration */
diff --git a/test/vfd_swmr_generator.c b/test/vfd_swmr_generator.c
index cfdcdf7..3131f56 100644
--- a/test/vfd_swmr_generator.c
+++ b/test/vfd_swmr_generator.c
@@ -177,9 +177,9 @@ gen_skeleton(const char *filename, hbool_t verbose, hbool_t vfd_swmr_write,
config->version = H5F__CURR_VFD_SWMR_CONFIG_VERSION;
config->tick_len = 4;
- config->max_lag = 6;
+ config->max_lag = 10;
config->vfd_swmr_writer = TRUE;
- config->md_pages_reserved = 512;
+ config->md_pages_reserved = 128;
HDstrcpy(config->md_file_path, "my_md_file");
/* Enable VFD SWMR configuration in fapl */
diff --git a/test/vfd_swmr_reader.c b/test/vfd_swmr_reader.c
index da7cb50..606d0c8 100644
--- a/test/vfd_swmr_reader.c
+++ b/test/vfd_swmr_reader.c
@@ -300,9 +300,9 @@ read_records(const char *filename, hbool_t verbose, FILE *verbose_file,
config->version = H5F__CURR_VFD_SWMR_CONFIG_VERSION;
config->tick_len = 4;
- config->max_lag = 6;
+ config->max_lag = 5;
config->vfd_swmr_writer = FALSE;
- config->md_pages_reserved = 2;
+ config->md_pages_reserved = 128;
HDstrcpy(config->md_file_path, "./my_md_file");
/* Enable VFD SWMR configuration */
diff --git a/test/vfd_swmr_remove_reader.c b/test/vfd_swmr_remove_reader.c
index a278330..1c752cd 100644
--- a/test/vfd_swmr_remove_reader.c
+++ b/test/vfd_swmr_remove_reader.c
@@ -285,9 +285,9 @@ read_records(const char *filename, unsigned verbose, unsigned long nseconds,
config->version = H5F__CURR_VFD_SWMR_CONFIG_VERSION;
config->tick_len = 4;
- config->max_lag = 6;
+ config->max_lag = 5;
config->vfd_swmr_writer = FALSE;
- config->md_pages_reserved = 2;
+ config->md_pages_reserved = 128;
HDstrcpy(config->md_file_path, "./my_md_file");
/* Enable VFD SWMR configuration */
diff --git a/test/vfd_swmr_remove_writer.c b/test/vfd_swmr_remove_writer.c
index 12131c4..200c884 100644
--- a/test/vfd_swmr_remove_writer.c
+++ b/test/vfd_swmr_remove_writer.c
@@ -124,9 +124,9 @@ open_skeleton(const char *filename, unsigned verbose, unsigned old)
config->version = H5F__CURR_VFD_SWMR_CONFIG_VERSION;
config->tick_len = 4;
- config->max_lag = 6;
+ config->max_lag = 5;
config->vfd_swmr_writer = TRUE;
- config->md_pages_reserved = 2;
+ config->md_pages_reserved = 128;
HDstrcpy(config->md_file_path, "./my_md_file");
/* Enable VFD SWMR configuration */
diff --git a/test/vfd_swmr_sparse_reader.c b/test/vfd_swmr_sparse_reader.c
index 0b17bb2..93c5ba6 100644
--- a/test/vfd_swmr_sparse_reader.c
+++ b/test/vfd_swmr_sparse_reader.c
@@ -207,9 +207,9 @@ read_records(const char *filename, unsigned verbose, unsigned long nrecords,
config->version = H5F__CURR_VFD_SWMR_CONFIG_VERSION;
config->tick_len = 4;
- config->max_lag = 6;
+ config->max_lag = 5;
config->vfd_swmr_writer = FALSE;
- config->md_pages_reserved = 2;
+ config->md_pages_reserved = 128;
HDstrcpy(config->md_file_path, "./my_md_file");
/* Enable VFD SWMR configuration */
diff --git a/test/vfd_swmr_sparse_writer.c b/test/vfd_swmr_sparse_writer.c
index e4e8254..bf1728a 100644
--- a/test/vfd_swmr_sparse_writer.c
+++ b/test/vfd_swmr_sparse_writer.c
@@ -123,9 +123,9 @@ open_skeleton(const char *filename, unsigned verbose)
config->version = H5F__CURR_VFD_SWMR_CONFIG_VERSION;
config->tick_len = 4;
- config->max_lag = 6;
+ config->max_lag = 5;
config->vfd_swmr_writer = TRUE;
- config->md_pages_reserved = 2;
+ config->md_pages_reserved = 128;
HDstrcpy(config->md_file_path, "./my_md_file");
/* Enable VFD SWMR configuration */
diff --git a/test/vfd_swmr_writer.c b/test/vfd_swmr_writer.c
index 083f6298..5e19ba7 100644
--- a/test/vfd_swmr_writer.c
+++ b/test/vfd_swmr_writer.c
@@ -128,9 +128,9 @@ open_skeleton(const char *filename, hbool_t verbose, FILE *verbose_file,
config->version = H5F__CURR_VFD_SWMR_CONFIG_VERSION;
config->tick_len = 4;
- config->max_lag = 6;
+ config->max_lag = 5;
config->vfd_swmr_writer = TRUE;
- config->md_pages_reserved = 2;
+ config->md_pages_reserved = 128;
HDstrcpy(config->md_file_path, "./my_md_file");
/* Enable VFD SWMR configuration */