diff options
author | Dana Robinson <derobins@hdfgroup.org> | 2015-02-22 08:38:18 (GMT) |
---|---|---|
committer | Dana Robinson <derobins@hdfgroup.org> | 2015-02-22 08:38:18 (GMT) |
commit | f634105bdb7c494a5ab39291d64c00676c11b476 (patch) | |
tree | 822ef161e763b0f354f670ffc073e1129b3a10cb | |
parent | fcd77ffe7ea32017bc00aa7652e7abd91d8b0b89 (diff) | |
download | hdf5-f634105bdb7c494a5ab39291d64c00676c11b476.zip hdf5-f634105bdb7c494a5ab39291d64c00676c11b476.tar.gz hdf5-f634105bdb7c494a5ab39291d64c00676c11b476.tar.bz2 |
[svn-r26271] Reverse merge of r26260 which was causing daily test failures.
Tested on: jam w/ parallel and fortran
-rw-r--r-- | MANIFEST | 2 | ||||
-rw-r--r-- | src/H5.c | 80 | ||||
-rw-r--r-- | testpar/CMakeLists.txt | 2 | ||||
-rw-r--r-- | testpar/Makefile.am | 5 | ||||
-rw-r--r-- | testpar/Makefile.in | 34 | ||||
-rw-r--r-- | testpar/t_pflush1.c | 11 | ||||
-rw-r--r-- | testpar/t_pflush2.c | 3 | ||||
-rw-r--r-- | testpar/t_prestart.c | 138 | ||||
-rw-r--r-- | testpar/t_pshutdown.c | 127 | ||||
-rw-r--r-- | testpar/t_shapesame.c | 3 | ||||
-rw-r--r-- | testpar/testphdf5.h | 1 | ||||
-rw-r--r-- | tools/perform/perf.c | 3 |
12 files changed, 45 insertions, 364 deletions
@@ -1146,8 +1146,6 @@ ./testpar/t_pflush2.c ./testpar/t_prop.c ./testpar/t_shapesame.c -./testpar/t_pshutdown.c -./testpar/t_prestart.c ./testpar/t_span_tree.c ./testpar/testpar.h ./testpar/testphdf5.c @@ -52,9 +52,7 @@ /* Local Prototypes */ /********************/ static void H5_debug_mask(const char*); -#ifdef H5_HAVE_PARALLEL -static int H5_mpi_delete_cb(MPI_Comm comm, int keyval, void *attr_val, int *flag); -#endif /*H5_HAVE_PARALLEL*/ + /*********************/ /* Package Variables */ @@ -111,43 +109,6 @@ H5_init_library(void) herr_t ret_value = SUCCEED; FUNC_ENTER_NOAPI(FAIL) - -#ifdef H5_HAVE_PARALLEL - { - int mpi_initialized; - int mpi_code; - - MPI_Initialized(&mpi_initialized); - -#ifdef H5_HAVE_MPE - /* Initialize MPE instrumentation library. */ - if (!H5_MPEinit_g) - { - int mpe_code; - if (mpi_initialized){ - mpe_code = MPE_Init_log(); - HDassert(mpe_code >=0); - H5_MPEinit_g = TRUE; - } - } -#endif /*H5_HAVE_MPE*/ - - /* add an attribute on MPI_COMM_SELF to call H5_term_library - when it is destroyed, i.e. on MPI_Finalize */ - if (mpi_initialized) { - int key_val; - - if(MPI_SUCCESS != (mpi_code = MPI_Comm_create_keyval(MPI_NULL_COPY_FN, - (MPI_Comm_delete_attr_function *)H5_mpi_delete_cb, - &key_val, NULL))) - HMPI_GOTO_ERROR(FAIL, "MPI_Comm_create_keyval failed", mpi_code) - - if(MPI_SUCCESS != (mpi_code = MPI_Comm_set_attr(MPI_COMM_SELF, key_val, NULL))) - HMPI_GOTO_ERROR(FAIL, "MPI_Comm_set_attr failed", mpi_code) - } - } -#endif /*H5_HAVE_PARALLEL*/ - /* * Make sure the package information is updated. */ @@ -171,6 +132,24 @@ H5_init_library(void) H5_debug_g.pkg[H5_PKG_V].name = "v"; H5_debug_g.pkg[H5_PKG_Z].name = "z"; +#ifdef H5_HAVE_MPE + /* Initialize MPE instrumentation library. May need to move this + * up earlier if any of the above initialization involves using + * the instrumentation code. + */ + if (!H5_MPEinit_g) + { + int mpe_code; + int mpi_initialized; + MPI_Initialized(&mpi_initialized); + if (mpi_initialized){ + mpe_code = MPE_Init_log(); + HDassert(mpe_code >=0); + H5_MPEinit_g = TRUE; + } + } +#endif + /* * Install atexit() library cleanup routines unless the H5dont_atexit() * has been called. Once we add something to the atexit() list it stays @@ -601,27 +580,6 @@ H5_debug_mask(const char *s) } } /* end H5_debug_mask() */ -#ifdef H5_HAVE_PARALLEL - -/*------------------------------------------------------------------------- - * Function: H5_mpi_delete_cb - * - * Purpose: Callback attribute on MPI_COMM_SELF to terminate the HDF5 - * library when the communicator is destroyed, i.e. on MPI_Finalize. - * - * Return: MPI_SUCCESS - * - * Programmer: Mohamad Chaarawi, February 2015 - * - *------------------------------------------------------------------------- - */ -static int H5_mpi_delete_cb(MPI_Comm UNUSED comm, int UNUSED keyval, void UNUSED *attr_val, int UNUSED *flag) -{ - H5_term_library(); - return MPI_SUCCESS; -} -#endif /*H5_HAVE_PARALLEL*/ - /*------------------------------------------------------------------------- * Function: H5get_libversion diff --git a/testpar/CMakeLists.txt b/testpar/CMakeLists.txt index d1db0b7..11437c0 100644 --- a/testpar/CMakeLists.txt +++ b/testpar/CMakeLists.txt @@ -46,8 +46,6 @@ set (H5P_TESTS t_cache t_pflush1 t_pflush2 - t_pshutdown - t_prestart t_shapesame ) diff --git a/testpar/Makefile.am b/testpar/Makefile.am index 1eae439..448f745 100644 --- a/testpar/Makefile.am +++ b/testpar/Makefile.am @@ -25,7 +25,7 @@ AM_CPPFLAGS+=-I$(top_srcdir)/src -I$(top_srcdir)/test # Test programs. These are our main targets. # -TEST_PROG_PARA=t_mpi testphdf5 t_cache t_pflush1 t_pflush2 t_pshutdown t_prestart t_shapesame +TEST_PROG_PARA=t_mpi testphdf5 t_cache t_pflush1 t_pflush2 t_shapesame check_PROGRAMS = $(TEST_PROG_PARA) @@ -39,8 +39,7 @@ LDADD = $(LIBH5TEST) $(LIBHDF5) # Temporary files # MPItest.h5 is from t_mpi # Para*.h5 are from testphdf -# shutdown.h5 is from t_pshutdown # go is used for debugging. See testphdf5.c. -CHECK_CLEANFILES+=MPItest.h5 Para*.h5 CacheTestDummy.h5 shutdown.h5 go +CHECK_CLEANFILES+=MPItest.h5 Para*.h5 CacheTestDummy.h5 go include $(top_srcdir)/config/conclude.am diff --git a/testpar/Makefile.in b/testpar/Makefile.in index 959731e..8857d47 100644 --- a/testpar/Makefile.in +++ b/testpar/Makefile.in @@ -112,8 +112,7 @@ CONFIG_HEADER = $(top_builddir)/src/H5config.h CONFIG_CLEAN_FILES = CONFIG_CLEAN_VPATH_FILES = am__EXEEXT_1 = t_mpi$(EXEEXT) testphdf5$(EXEEXT) t_cache$(EXEEXT) \ - t_pflush1$(EXEEXT) t_pflush2$(EXEEXT) t_pshutdown$(EXEEXT) \ - t_prestart$(EXEEXT) t_shapesame$(EXEEXT) + t_pflush1$(EXEEXT) t_pflush2$(EXEEXT) t_shapesame$(EXEEXT) t_cache_SOURCES = t_cache.c t_cache_OBJECTS = t_cache.$(OBJEXT) t_cache_LDADD = $(LDADD) @@ -134,14 +133,6 @@ t_pflush2_SOURCES = t_pflush2.c t_pflush2_OBJECTS = t_pflush2.$(OBJEXT) t_pflush2_LDADD = $(LDADD) t_pflush2_DEPENDENCIES = $(LIBH5TEST) $(LIBHDF5) -t_prestart_SOURCES = t_prestart.c -t_prestart_OBJECTS = t_prestart.$(OBJEXT) -t_prestart_LDADD = $(LDADD) -t_prestart_DEPENDENCIES = $(LIBH5TEST) $(LIBHDF5) -t_pshutdown_SOURCES = t_pshutdown.c -t_pshutdown_OBJECTS = t_pshutdown.$(OBJEXT) -t_pshutdown_LDADD = $(LDADD) -t_pshutdown_DEPENDENCIES = $(LIBH5TEST) $(LIBHDF5) t_shapesame_SOURCES = t_shapesame.c t_shapesame_OBJECTS = t_shapesame.$(OBJEXT) t_shapesame_LDADD = $(LDADD) @@ -188,10 +179,10 @@ AM_V_CCLD = $(am__v_CCLD_@AM_V@) am__v_CCLD_ = $(am__v_CCLD_@AM_DEFAULT_V@) am__v_CCLD_0 = @echo " CCLD " $@; am__v_CCLD_1 = -SOURCES = t_cache.c t_mpi.c t_pflush1.c t_pflush2.c t_prestart.c \ - t_pshutdown.c t_shapesame.c $(testphdf5_SOURCES) -DIST_SOURCES = t_cache.c t_mpi.c t_pflush1.c t_pflush2.c t_prestart.c \ - t_pshutdown.c t_shapesame.c $(testphdf5_SOURCES) +SOURCES = t_cache.c t_mpi.c t_pflush1.c t_pflush2.c t_shapesame.c \ + $(testphdf5_SOURCES) +DIST_SOURCES = t_cache.c t_mpi.c t_pflush1.c t_pflush2.c t_shapesame.c \ + $(testphdf5_SOURCES) am__can_run_installinfo = \ case $$AM_UPDATE_INFO_DIR in \ n|no|NO) false;; \ @@ -696,14 +687,13 @@ TRACE = perl $(top_srcdir)/bin/trace # Temporary files # MPItest.h5 is from t_mpi # Para*.h5 are from testphdf -# shutdown.h5 is from t_pshutdown # go is used for debugging. See testphdf5.c. CHECK_CLEANFILES = *.chkexe *.chklog *.clog MPItest.h5 Para*.h5 \ - CacheTestDummy.h5 shutdown.h5 go + CacheTestDummy.h5 go # Test programs. These are our main targets. # -TEST_PROG_PARA = t_mpi testphdf5 t_cache t_pflush1 t_pflush2 t_pshutdown t_prestart t_shapesame +TEST_PROG_PARA = t_mpi testphdf5 t_cache t_pflush1 t_pflush2 t_shapesame testphdf5_SOURCES = testphdf5.c t_dset.c t_file.c t_file_image.c t_mdset.c \ t_ph5basic.c t_coll_chunk.c t_span_tree.c t_chunk_alloc.c t_filter_read.c \ t_prop.c @@ -792,14 +782,6 @@ t_pflush2$(EXEEXT): $(t_pflush2_OBJECTS) $(t_pflush2_DEPENDENCIES) $(EXTRA_t_pfl @rm -f t_pflush2$(EXEEXT) $(AM_V_CCLD)$(LINK) $(t_pflush2_OBJECTS) $(t_pflush2_LDADD) $(LIBS) -t_prestart$(EXEEXT): $(t_prestart_OBJECTS) $(t_prestart_DEPENDENCIES) $(EXTRA_t_prestart_DEPENDENCIES) - @rm -f t_prestart$(EXEEXT) - $(AM_V_CCLD)$(LINK) $(t_prestart_OBJECTS) $(t_prestart_LDADD) $(LIBS) - -t_pshutdown$(EXEEXT): $(t_pshutdown_OBJECTS) $(t_pshutdown_DEPENDENCIES) $(EXTRA_t_pshutdown_DEPENDENCIES) - @rm -f t_pshutdown$(EXEEXT) - $(AM_V_CCLD)$(LINK) $(t_pshutdown_OBJECTS) $(t_pshutdown_LDADD) $(LIBS) - t_shapesame$(EXEEXT): $(t_shapesame_OBJECTS) $(t_shapesame_DEPENDENCIES) $(EXTRA_t_shapesame_DEPENDENCIES) @rm -f t_shapesame$(EXEEXT) $(AM_V_CCLD)$(LINK) $(t_shapesame_OBJECTS) $(t_shapesame_LDADD) $(LIBS) @@ -826,9 +808,7 @@ distclean-compile: @AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/t_pflush1.Po@am__quote@ @AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/t_pflush2.Po@am__quote@ @AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/t_ph5basic.Po@am__quote@ -@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/t_prestart.Po@am__quote@ @AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/t_prop.Po@am__quote@ -@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/t_pshutdown.Po@am__quote@ @AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/t_shapesame.Po@am__quote@ @AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/t_span_tree.Po@am__quote@ @AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/testphdf5.Po@am__quote@ diff --git a/testpar/t_pflush1.c b/testpar/t_pflush1.c index 1bcfeb8..ebe5c38 100644 --- a/testpar/t_pflush1.c +++ b/testpar/t_pflush1.c @@ -164,9 +164,12 @@ main(int argc, char* argv[]) } /* end else */ /* - * Some systems like AIX do not like files not closed when MPI_Finalize - * is called. So, we need to get the MPI file handles, close them by hand. - * Then the _exit is still needed to stop at_exit from happening in some systems. + * Some systems like Linux with mpich, if you just _exit without MPI_Finalize + * called, it would terminate but left the launching process waiting forever. + * OTHO, some systems like AIX do not like files not closed when MPI_Finalize + * is called. So, we need to get the MPI file handles, close them by hand, + * then MPI_Finalize. Then the _exit is still needed to stop at_exit from + * happening in some systems. * Note that MPIO VFD returns the address of the file-handle in the VFD struct * because MPI_File_close wants to modify the file-handle variable. */ @@ -192,11 +195,13 @@ main(int argc, char* argv[]) fflush(stdout); fflush(stderr); + MPI_Finalize(); HD_exit(0); error: fflush(stdout); fflush(stderr); + MPI_Finalize(); HD_exit(1); } diff --git a/testpar/t_pflush2.c b/testpar/t_pflush2.c index 03f7c82..e450f75 100644 --- a/testpar/t_pflush2.c +++ b/testpar/t_pflush2.c @@ -209,6 +209,9 @@ main(int argc, char* argv[]) puts(" Test not compatible with current Virtual File Driver"); } + /* close HDF5 library */ + H5close(); + MPI_Finalize(); return 0; diff --git a/testpar/t_prestart.c b/testpar/t_prestart.c deleted file mode 100644 index 8f20842..0000000 --- a/testpar/t_prestart.c +++ /dev/null @@ -1,138 +0,0 @@ -/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * - * Copyright by The HDF Group. * - * Copyright by the Board of Trustees of the University of Illinois. * - * All rights reserved. * - * * - * This file is part of HDF5. The full HDF5 copyright notice, including * - * terms governing use, modification, and redistribution, is contained in * - * the files COPYING and Copyright.html. COPYING can be found at the root * - * of the source code distribution tree; Copyright.html can be found at the * - * root level of an installed copy of the electronic HDF5 document set and * - * is linked from the top-level documents page. It can also be found at * - * http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have * - * access to either file, you may request a copy from help@hdfgroup.org. * - * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ - -/* - * Programmer: Mohamad Chaarawi - * February 2015 - * - * Purpose: This test opens a file created by the t_pshutdown program - * and makes sure the objects created are there. - */ - -#include "testphdf5.h" - -int nerrors = 0; /* errors count */ - -const char *FILENAME[] = { - "shutdown", - NULL -}; - -int -main (int argc, char **argv) -{ - hid_t file_id, dset_id, grp_id; - hid_t fapl, sid, mem_dataspace; - herr_t ret; - char filename[1024]; - int mpi_size, mpi_rank, ndims, i, j; - MPI_Comm comm = MPI_COMM_WORLD; - MPI_Info info = MPI_INFO_NULL; - hsize_t dims[RANK]; - hsize_t start[RANK]; - hsize_t count[RANK]; - hsize_t stride[RANK]; - hsize_t block[RANK]; - DATATYPE *data_array = NULL, *dataptr; /* data buffer */ - - MPI_Init(&argc, &argv); - MPI_Comm_size(comm, &mpi_size); - MPI_Comm_rank(comm, &mpi_rank); - - if(MAINPROCESS) - TESTING("proper shutdown of HDF5 library"); - - /* Set up file access property list with parallel I/O access */ - fapl = H5Pcreate(H5P_FILE_ACCESS); - VRFY((fapl >= 0), "H5Pcreate succeeded"); - ret = H5Pset_fapl_mpio(fapl, comm, info); - VRFY((ret >= 0), ""); - - h5_fixname(FILENAME[0], fapl, filename, sizeof filename); - file_id = H5Fopen(filename, H5F_ACC_RDONLY, fapl); - VRFY((file_id >= 0), "H5Fopen succeeded"); - - grp_id = H5Gopen(file_id, "Group", H5P_DEFAULT); - VRFY((grp_id >= 0), "H5Gopen succeeded"); - - dset_id = H5Dopen(grp_id, "Dataset", H5P_DEFAULT); - VRFY((dset_id >= 0), "H5Dopen succeeded"); - - sid = H5Dget_space(dset_id); - VRFY((dset_id >= 0), "H5Dget_space succeeded"); - - ndims = H5Sget_simple_extent_dims(sid, dims, NULL); - VRFY((ndims == 2), "H5Sget_simple_extent_dims succeeded"); - VRFY(dims[0] == ROW_FACTOR*mpi_size, "Wrong dataset dimensions"); - VRFY(dims[1] == COL_FACTOR*mpi_size, "Wrong dataset dimensions"); - - /* allocate memory for data buffer */ - data_array = (DATATYPE *)HDmalloc(dims[0]*dims[1]*sizeof(DATATYPE)); - VRFY((data_array != NULL), "data_array HDmalloc succeeded"); - - /* Each process takes a slabs of rows. */ - block[0] = dims[0]/mpi_size; - block[1] = dims[1]; - stride[0] = block[0]; - stride[1] = block[1]; - count[0] = 1; - count[1] = 1; - start[0] = mpi_rank*block[0]; - start[1] = 0; - - ret = H5Sselect_hyperslab(sid, H5S_SELECT_SET, start, stride, count, block); - VRFY((ret >= 0), "H5Sset_hyperslab succeeded"); - - /* create a memory dataspace independently */ - mem_dataspace = H5Screate_simple (RANK, block, NULL); - VRFY((mem_dataspace >= 0), ""); - - /* write data independently */ - ret = H5Dread(dset_id, H5T_NATIVE_INT, mem_dataspace, sid, - H5P_DEFAULT, data_array); - VRFY((ret >= 0), "H5Dwrite succeeded"); - - dataptr = data_array; - - for (i=0; i < block[0]; i++){ - for (j=0; j < block[1]; j++){ - if(*dataptr != mpi_rank+1) { - printf("Dataset Verify failed at [%lu][%lu](row %lu, col %lu): expect %d, got %d\n", - (unsigned long)i, (unsigned long)j, - (unsigned long)(i+start[0]), (unsigned long)(j+start[1]), - mpi_rank+1, *(dataptr)); - nerrors ++; - } - dataptr++; - } - } - MPI_Finalize(); - HDremove(filename); - - /* release data buffers */ - if(data_array) - HDfree(data_array); - - nerrors += GetTestNumErrs(); - - if(MAINPROCESS) { - if(0 == nerrors) - PASSED() - else - H5_FAILED() - } - - return (nerrors!=0); -} diff --git a/testpar/t_pshutdown.c b/testpar/t_pshutdown.c deleted file mode 100644 index 7086aa6..0000000 --- a/testpar/t_pshutdown.c +++ /dev/null @@ -1,127 +0,0 @@ -/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * - * Copyright by The HDF Group. * - * Copyright by the Board of Trustees of the University of Illinois. * - * All rights reserved. * - * * - * This file is part of HDF5. The full HDF5 copyright notice, including * - * terms governing use, modification, and redistribution, is contained in * - * the files COPYING and Copyright.html. COPYING can be found at the root * - * of the source code distribution tree; Copyright.html can be found at the * - * root level of an installed copy of the electronic HDF5 document set and * - * is linked from the top-level documents page. It can also be found at * - * http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have * - * access to either file, you may request a copy from help@hdfgroup.org. * - * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ - -/* - * Programmer: Mohamad Chaarawi - * February 2015 - * - * Purpose: This test creates a file and a bunch of objects in the - * file and then calls MPI_Finalize without closing anything. The - * library should exercise the attribute callback destroy attached to - * MPI_COMM_SELF and terminate the HDF5 library closing all open - * objects. The t_prestart test will read back the file and make sure - * all created objects are there. - */ - -#include "testphdf5.h" - -int nerrors = 0; /* errors count */ - -const char *FILENAME[] = { - "shutdown", - NULL -}; - -int -main (int argc, char **argv) -{ - hid_t file_id, dset_id, grp_id; - hid_t fapl, sid, mem_dataspace; - hsize_t dims[RANK], i; - herr_t ret; - char filename[1024]; - int mpi_size, mpi_rank; - MPI_Comm comm = MPI_COMM_WORLD; - MPI_Info info = MPI_INFO_NULL; - hsize_t start[RANK]; - hsize_t count[RANK]; - hsize_t stride[RANK]; - hsize_t block[RANK]; - DATATYPE *data_array = NULL; /* data buffer */ - - MPI_Init(&argc, &argv); - MPI_Comm_size(comm, &mpi_size); - MPI_Comm_rank(comm, &mpi_rank); - - if(MAINPROCESS) - TESTING("proper shutdown of HDF5 library"); - - /* Set up file access property list with parallel I/O access */ - fapl = H5Pcreate(H5P_FILE_ACCESS); - VRFY((fapl >= 0), "H5Pcreate succeeded"); - ret = H5Pset_fapl_mpio(fapl, comm, info); - VRFY((ret >= 0), ""); - - h5_fixname(FILENAME[0], fapl, filename, sizeof filename); - file_id = H5Fcreate(filename, H5F_ACC_TRUNC, H5P_DEFAULT, fapl); - VRFY((file_id >= 0), "H5Fcreate succeeded"); - grp_id = H5Gcreate(file_id, "Group", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); - VRFY((grp_id >= 0), "H5Gcreate succeeded"); - - dims[0] = ROW_FACTOR*mpi_size; - dims[1] = COL_FACTOR*mpi_size; - sid = H5Screate_simple (RANK, dims, NULL); - VRFY((sid >= 0), "H5Screate_simple succeeded"); - - dset_id = H5Dcreate2(grp_id, "Dataset", H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); - VRFY((dset_id >= 0), "H5Dcreate succeeded"); - - /* allocate memory for data buffer */ - data_array = (DATATYPE *)HDmalloc(dims[0]*dims[1]*sizeof(DATATYPE)); - VRFY((data_array != NULL), "data_array HDmalloc succeeded"); - - /* Each process takes a slabs of rows. */ - block[0] = dims[0]/mpi_size; - block[1] = dims[1]; - stride[0] = block[0]; - stride[1] = block[1]; - count[0] = 1; - count[1] = 1; - start[0] = mpi_rank*block[0]; - start[1] = 0; - - /* put some trivial data in the data_array */ - for(i=0 ; i<dims[0]*dims[1]; i++) - data_array[i] = mpi_rank + 1; - - ret = H5Sselect_hyperslab(sid, H5S_SELECT_SET, start, stride, count, block); - VRFY((ret >= 0), "H5Sset_hyperslab succeeded"); - - /* create a memory dataspace independently */ - mem_dataspace = H5Screate_simple (RANK, block, NULL); - VRFY((mem_dataspace >= 0), ""); - - /* write data independently */ - ret = H5Dwrite(dset_id, H5T_NATIVE_INT, mem_dataspace, sid, - H5P_DEFAULT, data_array); - VRFY((ret >= 0), "H5Dwrite succeeded"); - - /* release data buffers */ - if(data_array) - HDfree(data_array); - - MPI_Finalize(); - - nerrors += GetTestNumErrs(); - - if(MAINPROCESS) { - if(0 == nerrors) - PASSED() - else - H5_FAILED() - } - - return (nerrors!=0); -} diff --git a/testpar/t_shapesame.c b/testpar/t_shapesame.c index 9088470..d167687 100644 --- a/testpar/t_shapesame.c +++ b/testpar/t_shapesame.c @@ -5142,7 +5142,10 @@ int main(int argc, char **argv) printf("Shape Same tests finished with no errors\n"); printf("===================================\n"); } + /* close HDF5 library */ + H5close(); + /* MPI_Finalize must be called AFTER H5close which may use MPI calls */ MPI_Finalize(); /* cannot just return (nerrors) because exit code is limited to 1byte */ diff --git a/testpar/testphdf5.h b/testpar/testphdf5.h index 8338ce2..3597b17 100644 --- a/testpar/testphdf5.h +++ b/testpar/testphdf5.h @@ -301,5 +301,4 @@ int dataset_vrfy(hsize_t start[], hsize_t count[], hsize_t stride[], hsize_t block[], DATATYPE *dataset, DATATYPE *original); void point_set (hsize_t start[], hsize_t count[], hsize_t stride[], hsize_t block[], size_t num_points, hsize_t coords[], int order); - #endif /* PHDF5TEST_H */ diff --git a/tools/perform/perf.c b/tools/perform/perf.c index 1bd33b6..58db6cc 100644 --- a/tools/perform/perf.c +++ b/tools/perform/perf.c @@ -391,6 +391,9 @@ die_jar_jar_die: free(tmp); if (opt_correct) free(tmp2); + /* close HDF5 library */ + H5close(); + MPI_Finalize(); return(0); |