diff options
author | Allen Byrne <byrn@hdfgroup.org> | 2018-01-02 20:39:32 (GMT) |
---|---|---|
committer | Allen Byrne <byrn@hdfgroup.org> | 2018-01-02 20:39:45 (GMT) |
commit | 5f4676f3c8f077b1667611b78d2cb19deec1f37a (patch) | |
tree | 41772222082c0496ac6e4086e1b70e6020e24943 | |
parent | d31b45766fa5bdbb7245cf5aa9444c9e6c6ca863 (diff) | |
download | hdf5-5f4676f3c8f077b1667611b78d2cb19deec1f37a.zip hdf5-5f4676f3c8f077b1667611b78d2cb19deec1f37a.tar.gz hdf5-5f4676f3c8f077b1667611b78d2cb19deec1f37a.tar.bz2 |
HDFFV-8745 - fix implementation of 8625
-rw-r--r-- | MANIFEST | 2 | ||||
-rw-r--r-- | tools/lib/h5diff_attr.c | 20 | ||||
-rw-r--r-- | tools/lib/h5diff_dset.c | 19 | ||||
-rw-r--r-- | tools/test/h5diff/CMakeTests.cmake | 12 | ||||
-rw-r--r-- | tools/test/h5diff/testfiles/h5diff_8625.txt | 10 | ||||
-rw-r--r-- | tools/test/h5diff/testfiles/h5diff_tmp1.txt | 5 | ||||
-rw-r--r-- | tools/test/h5diff/testh5diff.sh.in | 8 |
7 files changed, 41 insertions, 35 deletions
@@ -2425,7 +2425,7 @@ ./tools/test/h5diff/testfiles/non_comparables2.h5 ./tools/test/h5diff/testfiles/tmptest2.he5 ./tools/test/h5diff/testfiles/tmpSingleSiteBethe.reference.h5 -./tools/test/h5diff/testfiles/h5diff_tmp1.txt +./tools/test/h5diff/testfiles/h5diff_8625.txt ./tools/test/h5diff/testfiles/tmptest.he5 ./tools/test/h5diff/testfiles/h5diff_tmp2.txt ./tools/test/h5diff/testfiles/tmpSingleSiteBethe.output.h5 diff --git a/tools/lib/h5diff_attr.c b/tools/lib/h5diff_attr.c index 6019738..4e4b40d 100644 --- a/tools/lib/h5diff_attr.c +++ b/tools/lib/h5diff_attr.c @@ -385,28 +385,8 @@ hsize_t diff_attr(hid_t loc1_id, /* get the datatypes */ if((ftype1_id = H5Aget_type(attr1_id)) < 0) HGOTO_ERROR(1, H5E_tools_min_id_g, "H5Aget_type first attribute failed"); - vstrtype1 = H5Tis_variable_str(ftype1_id); if((ftype2_id = H5Aget_type(attr2_id)) < 0) HGOTO_ERROR(1, H5E_tools_min_id_g, "H5Aget_type second attribute failed"); - vstrtype2 = H5Tis_variable_str(ftype2_id); - - /* no compare if either one but not both are variable string type */ - if (vstrtype1 != vstrtype2) { - if((opts->m_verbose || opts->m_list_not_cmp)) - parallel_print("Not comparable: one of attribute <%s/%s> or <%s/%s> is of variable length type\n", - path1, name1, path2, name2); - opts->not_cmp = 1; - if (H5Tclose(ftype1_id) < 0) - HGOTO_ERROR(1, H5E_tools_min_id_g, "H5Tclose first attribute ftype failed"); - if (H5Tclose(ftype2_id) < 0) - HGOTO_ERROR(1, H5E_tools_min_id_g, "H5Tclose second attribute ftype failed"); - if (H5Aclose(attr1_id) < 0) - HGOTO_ERROR(1, H5E_tools_min_id_g, "H5Aclose first attribute failed"); - if (H5Aclose(attr2_id) < 0) - HGOTO_ERROR(1, H5E_tools_min_id_g, "H5Aclose second attribute failed"); - - continue; - } if((mtype1_id = H5Tget_native_type(ftype1_id, H5T_DIR_DEFAULT)) < 0) HGOTO_ERROR(1, H5E_tools_min_id_g, "H5Tget_native_type first attribute ftype failed"); diff --git a/tools/lib/h5diff_dset.c b/tools/lib/h5diff_dset.c index ee42b99..55e9839 100644 --- a/tools/lib/h5diff_dset.c +++ b/tools/lib/h5diff_dset.c @@ -767,12 +767,31 @@ int diff_can_type(hid_t f_tid1, /* file data type */ } } + if(tclass1 == H5T_STRING) { + hid_t vstrtype1 = -1; + hid_t vstrtype2 = -1; + h5difftrace("diff_can_type end - H5T_STRING\n"); + + vstrtype1 = H5Tis_variable_str(f_tid1); + vstrtype2 = H5Tis_variable_str(f_tid2); + + /* no compare if either one but not both are variable string type */ + if (vstrtype1 != vstrtype2) { + if((opts->m_verbose || opts->m_list_not_cmp)) + parallel_print("Not comparable: <%s> or <%s> is of mixed string type\n", + obj1_name, obj2_name); + opts->not_cmp = 1; + HGOTO_DONE(0); + } + } + if(tclass1 == H5T_COMPOUND) { int nmembs1; int nmembs2; int j; hid_t memb_type1 = -1; hid_t memb_type2 = -1; + h5difftrace("diff_can_type end - H5T_COMPOUND\n"); nmembs1 = H5Tget_nmembers(f_tid1); nmembs2 = H5Tget_nmembers(f_tid2); diff --git a/tools/test/h5diff/CMakeTests.cmake b/tools/test/h5diff/CMakeTests.cmake index bbc39d8..773b03d 100644 --- a/tools/test/h5diff/CMakeTests.cmake +++ b/tools/test/h5diff/CMakeTests.cmake @@ -293,7 +293,7 @@ ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_800.txt ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_801.txt ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_90.txt - ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_tmp1.txt + ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_8625.txt ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_tmp2.txt ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_ud.txt ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_udfail.txt @@ -1021,6 +1021,8 @@ h5diff_800.out.err h5diff_801.out h5diff_801.out.err + h5diff_8625.out + h5diff_8625.out.err h5diff_90.out h5diff_90.out.err h5diff_v1.out @@ -1281,9 +1283,7 @@ ADD_H5_TEST (h5diff_631 0 -v --use-system-epsilon ${FILE1} ${FILE1} g1/fp18 g1/f # 7. attributes # ############################################################################## ADD_H5_TEST (h5diff_70 1 -v ${FILE5} ${FILE6}) -# temporary test to verify HDF5-8625 -ADD_H5_TEST (h5diff_tmp1 0 tmptest2.he5 tmptest.he5) -# temporary test to verify HDF5-8639 +# temporary test to verify HDFFV-8639 ADD_H5_TEST (h5diff_tmp2 1 tmpSingleSiteBethe.output.h5 tmpSingleSiteBethe.reference.h5) # ################################################## @@ -1613,7 +1613,9 @@ ADD_H5_TEST (h5diff_487 1 -v --exclude-path "/group1/dset" h5diff_exclude3-1.h5 # ############################################################################## # # diff various multiple vlen and fixed strings in a compound type dataset # ############################################################################## -ADD_H5_TEST (h5diff_530 0 -v ${COMP_VL_STRS_FILE} ${COMP_VL_STRS_FILE} /group /group_copy) +ADD_H5_TEST (h5diff_530 0 -v ${COMP_VL_STRS_FILE} ${COMP_VL_STRS_FILE} /group /group_copy) +# test to verify HDFFV-8625 +ADD_H5_TEST (h5diff_8625 0 -v --enable-error-stack ${COMP_VL_STRS_FILE} ${COMP_VL_STRS_FILE} /group/Compound_dset1 /group_copy/Compound_dset3) ADD_H5_TEST (h5diff_vlstr 0 -v tvlstr.h5 tvlstr2.h5) # ############################################################################## diff --git a/tools/test/h5diff/testfiles/h5diff_8625.txt b/tools/test/h5diff/testfiles/h5diff_8625.txt new file mode 100644 index 0000000..a7ddb86 --- /dev/null +++ b/tools/test/h5diff/testfiles/h5diff_8625.txt @@ -0,0 +1,10 @@ +dataset: </group/Compound_dset1> and </group_copy/Compound_dset3> +Warning: different storage datatype +Warning: different storage datatype +Not comparable: </group/Compound_dset1> or </group_copy/Compound_dset3> is of mixed string type +0 differences found +-------------------------------- +Some objects are not comparable +-------------------------------- +Use -c for a list of objects without details of differences. +EXIT CODE: 0 diff --git a/tools/test/h5diff/testfiles/h5diff_tmp1.txt b/tools/test/h5diff/testfiles/h5diff_tmp1.txt deleted file mode 100644 index 40e3fb6..0000000 --- a/tools/test/h5diff/testfiles/h5diff_tmp1.txt +++ /dev/null @@ -1,5 +0,0 @@ --------------------------------- -Some objects are not comparable --------------------------------- -Use -c for a list of objects. -EXIT CODE: 0 diff --git a/tools/test/h5diff/testh5diff.sh.in b/tools/test/h5diff/testh5diff.sh.in index df472d4..2f04ab2 100644 --- a/tools/test/h5diff/testh5diff.sh.in +++ b/tools/test/h5diff/testh5diff.sh.in @@ -337,7 +337,7 @@ $SRC_H5DIFF_TESTFILES/h5diff_709.txt $SRC_H5DIFF_TESTFILES/h5diff_710.txt $SRC_H5DIFF_TESTFILES/h5diff_80.txt $SRC_H5DIFF_TESTFILES/h5diff_90.txt -$SRC_H5DIFF_TESTFILES/h5diff_tmp1.txt +$SRC_H5DIFF_TESTFILES/h5diff_8625.txt $SRC_H5DIFF_TESTFILES/h5diff_tmp2.txt $SRC_H5DIFF_TESTFILES/h5diff_v1.txt $SRC_H5DIFF_TESTFILES/h5diff_v2.txt @@ -820,9 +820,7 @@ TOOLTEST h5diff_631.txt -v --use-system-epsilon h5diff_basic1.h5 h5diff_basic1.h # 7. attributes # ############################################################################## TOOLTEST h5diff_70.txt -v h5diff_attr1.h5 h5diff_attr2.h5 -# temporary test to verify HDF5-8625 -TOOLTEST h5diff_tmp1.txt tmptest2.he5 tmptest.he5 -# temporary test to verify HDF5-8639 +# temporary test to verify HDFFV-8639 TOOLTEST h5diff_tmp2.txt tmpSingleSiteBethe.output.h5 tmpSingleSiteBethe.reference.h5 # ################################################## @@ -1145,6 +1143,8 @@ TOOLTEST h5diff_487.txt -v --exclude-path "/group1/dset" h5diff_exclude3-1.h5 h5 # # diff various multiple vlen and fixed strings in a compound type dataset # ############################################################################## TOOLTEST h5diff_530.txt -v h5diff_comp_vl_strs.h5 h5diff_comp_vl_strs.h5 /group /group_copy +# test to verify HDFFV-8625 +TOOLTEST h5diff_8625.txt -v --enable-error-stack h5diff_comp_vl_strs.h5 h5diff_comp_vl_strs.h5 /group/Compound_dset1 /group_copy/Compound_dset3 TOOLTEST h5diff_vlstr.txt -v tvlstr.h5 tvlstr2.h5 # ############################################################################## |