Update cmake pubconf to match autotools and add strtoll checks

6 files changed, 124 insertions, 45 deletions

diff --git a/config/cmake/H5pubconf.h.in b/config/cmake/H5pubconf.h.in
index 5dad4f3..55de8f8 100644
--- a/config/cmake/H5pubconf.h.in
+++ b/config/cmake/H5pubconf.h.in
@@ -41,17 +41,41 @@
 /* As FC_FUNC, but for C identifiers containing underscores. */
 #define @H5_FC_FUNC_@
 
-/* Define Fortran Maximum Real Decimal Precision */
-#cmakedefine H5_PAC_FC_MAX_REAL_PRECISION @H5_PAC_FC_MAX_REAL_PRECISION@
-
-/* Define C Maximum Real Decimal Precision */
-#cmakedefine H5_PAC_C_MAX_REAL_PRECISION @H5_PAC_C_MAX_REAL_PRECISION@
+/* Define if Fortran C_LONG_DOUBLE is different from C_DOUBLE */
+#cmakedefine H5_FORTRAN_C_LONG_DOUBLE_IS_UNIQUE @H5_FORTRAN_C_LONG_DOUBLE_IS_UNIQUE@
 
 /* Define if we have Fortran C_LONG_DOUBLE */
 #cmakedefine H5_FORTRAN_HAVE_C_LONG_DOUBLE @H5_FORTRAN_HAVE_C_LONG_DOUBLE@
 
-/* Determine if __float128 is available */
-#cmakedefine H5_HAVE_FLOAT128 @H5_HAVE_FLOAT128@
+/* Define if we have Fortran intrinsic C_SIZEOF */
+#cmakedefine H5_FORTRAN_HAVE_C_SIZEOF @H5_FORTRAN_HAVE_C_SIZEOF@
+
+/* Define if we have Fortran intrinsic SIZEOF */
+#cmakedefine H5_FORTRAN_HAVE_SIZEOF @H5_FORTRAN_HAVE_SIZEOF@
+
+/* Define if we have Fortran intrinsic STORAGE_SIZE */
+#cmakedefine H5_FORTRAN_HAVE_STORAGE_SIZE @H5_FORTRAN_HAVE_STORAGE_SIZE@
+
+/* Determine the size of C long double */
+#cmakedefine H5_FORTRAN_SIZEOF_LONG_DOUBLE @H5_FORTRAN_SIZEOF_LONG_DOUBLE@
+
+/* Define Fortran compiler ID */
+#cmakedefine H5_Fortran_COMPILER_ID @H5_Fortran_COMPILER_ID@
+
+/* Define valid Fortran INTEGER KINDs */
+#cmakedefine H5_H5CONFIG_F_IKIND @H5_HH5_H5CONFIG_F_NUM_RKIND5CONFIG_F_IKIND@
+
+/* Define number of valid Fortran INTEGER KINDs */
+#cmakedefine H5_H5CONFIG_F_NUM_IKIND @H5_H5CONFIG_F_NUM_IKIND@
+
+/* Define number of valid Fortran REAL KINDs */
+#cmakedefine H5_H5CONFIG_F_NUM_RKIND @H5_H5CONFIG_F_NUM_RKIND@
+
+/* Define valid Fortran REAL KINDs */
+#cmakedefine H5_H5CONFIG_F_RKIND @H5_H5CONFIG_F_RKIND@
+
+/* Define valid Fortran REAL KINDs Sizeof */
+#cmakedefine H5_H5CONFIG_F_RKIND_SIZEOF @H5_H5CONFIG_F_RKIND_SIZEOF@
 
 /* Define to 1 if you have the `alarm' function. */
 #cmakedefine H5_HAVE_ALARM @H5_HAVE_ALARM@
@@ -81,7 +105,7 @@
 /* Define to 1 if you have the `difftime' function. */
 #cmakedefine H5_HAVE_DIFFTIME @H5_HAVE_DIFFTIME@
 
-/* Define if the direct I/O virtual file driver should be compiled */
+/* Define if the direct I/O virtual file driver (VFD) should be compiled */
 #cmakedefine H5_HAVE_DIRECT @H5_HAVE_DIRECT@
 
 /* Define to 1 if you have the <dirent.h> header file. */
@@ -108,6 +132,9 @@
 /* Define if support for szip filter is enabled */
 #cmakedefine H5_HAVE_FILTER_SZIP @H5_HAVE_FILTER_SZIP@
 
+/* Determine if __float128 is available */
+#cmakedefine H5_HAVE_FLOAT128 @H5_HAVE_FLOAT128@
+
 /* Define to 1 if you have the `flock' function. */
 #cmakedefine H5_HAVE_FLOCK @H5_HAVE_FLOCK@
 
@@ -162,7 +189,7 @@
 /* Define if the compiler understands inline */
 #cmakedefine H5_HAVE_INLINE @H5_HAVE_INLINE@
 
-/* Define if library will contain instrumentation to detect correct
+/* Define if parallel library will contain instrumentation to detect correct
    optimization operation */
 #cmakedefine H5_HAVE_INSTRUMENTED_LIBRARY @H5_HAVE_INSTRUMENTED_LIBRARY@
 
@@ -244,8 +271,8 @@
 /* Define to 1 if you have the <pthread.h> header file. */
 #cmakedefine H5_HAVE_PTHREAD_H @H5_HAVE_PTHREAD_H@
 
-/* Define to 1 if you have the 'InitOnceExecuteOnce' function. */
-#cmakedefine H5_HAVE_WIN_THREADS @H5_HAVE_WIN_THREADS@
+/* Define to 1 if you have the <quadmath.h> header file. */
+#cmakedefine H5_HAVE_QUADMATH_H @H5_HAVE_QUADMATH_H@
 
 /* Define to 1 if you have the `random' function. */
 #cmakedefine H5_HAVE_RANDOM @H5_HAVE_RANDOM@
@@ -254,10 +281,10 @@
 #cmakedefine H5_HAVE_RAND_R @H5_HAVE_RAND_R@
 
 /* Define to 1 if you have the `round' function. */
-#cmakedefine H5_HAVE_ROUNDF @H5_HAVE_ROUNDF@
+#cmakedefine H5_HAVE_ROUND @H5_HAVE_ROUND@
 
 /* Define to 1 if you have the `roundf' function. */
-#cmakedefine H5_HAVE_ROUND @H5_HAVE_ROUND@
+#cmakedefine H5_HAVE_ROUNDF @H5_HAVE_ROUNDF@
 
 /* Define to 1 if you have the `setjmp' function. */
 #cmakedefine H5_HAVE_SETJMP @H5_HAVE_SETJMP@
@@ -292,6 +319,9 @@
 /* Define if `struct stat' has the `st_blocks' field */
 #cmakedefine H5_HAVE_STAT_ST_BLOCKS @H5_HAVE_STAT_ST_BLOCKS@
 
+/* Define to 1 if you have the <stdbool.h> header file. */
+#cmakedefine H5_HAVE_STDBOOL_H @H5_HAVE_STDBOOL_H@
+
 /* Define to 1 if you have the <stddef.h> header file. */
 #cmakedefine H5_HAVE_STDDEF_H @H5_HAVE_STDDEF_H@
 
@@ -307,6 +337,12 @@
 /* Define to 1 if you have the `strdup' function. */
 #cmakedefine H5_HAVE_STRDUP @H5_HAVE_STRDUP@
 
+/* Define to 1 if you have the `strtoll' function. */
+#cmakedefine H5_HAVE_STRTOLL @H5_HAVE_STRTOLL@
+
+/* Define to 1 if you have the `strtoull' function. */
+#cmakedefine H5_HAVE_STRTOULL @H5_HAVE_STRTOULL@
+
 /* Define to 1 if you have the <strings.h> header file. */
 #cmakedefine H5_HAVE_STRINGS_H @H5_HAVE_STRINGS_H@
 
@@ -325,6 +361,9 @@
 /* Define to 1 if you have the `system' function. */
 #cmakedefine H5_HAVE_SYSTEM @H5_HAVE_SYSTEM@
 
+/* Define to 1 if you have the <sys/file.h> header file. */
+#cmakedefine H5_HAVE_SYS_FILE_H @H5_HAVE_SYS_FILE_H@
+
 /* Define to 1 if you have the <sys/ioctl.h> header file. */
 #cmakedefine H5_HAVE_SYS_IOCTL_H @H5_HAVE_SYS_IOCTL_H@
 
@@ -379,6 +418,9 @@
 /* Define to 1 if you have the `waitpid' function. */
 #cmakedefine H5_HAVE_WAITPID @H5_HAVE_WAITPID@
 
+/* Define to 1 if you have the 'InitOnceExecuteOnce' function. */
+#cmakedefine H5_HAVE_WIN_THREADS @H5_HAVE_WIN_THREADS@
+
 /* Define if your system has window style path name. */
 #cmakedefine H5_HAVE_WINDOW_PATH @H5_HAVE_WINDOW_PATH@
 
@@ -419,10 +461,12 @@
    with special algorithm. */
 #cmakedefine H5_LONG_TO_LDOUBLE_SPECIAL @H5_LONG_TO_LDOUBLE_SPECIAL@
 
-/* Define to the sub-directory in which libtool stores uninstalled libraries.
-   */
+/* Define to the sub-directory where libtool stores uninstalled libraries. */
 #cmakedefine H5_LT_OBJDIR @H5_LT_OBJDIR@
 
+/* Define to enable internal memory allocation sanity checking. */
+/* #cmakedefine H5_MEMORY_ALLOC_SANITY_CHECK @H5_MEMORY_ALLOC_SANITY_CHECK@ ** Define in CMakeLists.txt */
+
 /* Define if the metadata trace file code is to be compiled in */
 #cmakedefine H5_METADATA_TRACE_FILE @H5_METADATA_TRACE_FILE@
 
@@ -453,9 +497,18 @@
 /* Define to the version of this package. */
 #define H5_PACKAGE_VERSION "@HDF5_PACKAGE_VERSION_STRING@"
 
+/* Determine the maximum decimal precision in C */
+#define H5_PAC_C_MAX_REAL_PRECISION @H5_PAC_C_MAX_REAL_PRECISION@
+
+/* Define Fortran Maximum Real Decimal Precision */
+#cmakedefine H5_PAC_FC_MAX_REAL_PRECISION @H5_PAC_FC_MAX_REAL_PRECISION@
+
 /* Width for printf() for type `long long' or `__int64', use `ll' */
 #cmakedefine H5_PRINTF_LL_WIDTH @H5_PRINTF_LL_WIDTH@
 
+/* The size of `bool', as computed by sizeof. */
+#cmakedefine H5_SIZEOF_BOOL @H5_SIZEOF_BOOL@
+
 /* The size of `char', as computed by sizeof. */
 #cmakedefine H5_SIZEOF_CHAR @H5_SIZEOF_CHAR@
 
@@ -589,14 +642,14 @@
 /* The size of `unsigned', as computed by sizeof. */
 #cmakedefine H5_SIZEOF_UNSIGNED @H5_SIZEOF_UNSIGNED@
 
-/* The size of `__int64', as computed by sizeof. */
-#define H5_SIZEOF___INT64 @H5_SIZEOF___INT64@
+/* The size of `_Quad', as computed by sizeof. */
+#define H5_SIZEOF__QUAD @H5_SIZEOF__QUAD@
 
-/* Define to 1 if you have the <stdbool.h> header file. */
-#cmakedefine H5_HAVE_STDBOOL_H @H5_HAVE_STDBOOL_H@
+/* The size of `__float128', as computed by sizeof. */
+#define H5_SIZEOF___FLOAT128 @H5_SIZEOF___FLOAT128@
 
-/* The size of `bool', as computed by sizeof. */
-#cmakedefine H5_SIZEOF_BOOL @H5_SIZEOF_BOOL@
+/* The size of `__int64', as computed by sizeof. */
+#define H5_SIZEOF___INT64 @H5_SIZEOF___INT64@
 
 /* Define to 1 if you have the ANSI C header files. */
 #cmakedefine H5_STDC_HEADERS @H5_STDC_HEADERS@
diff --git a/config/cmake_ext_mod/ConfigureChecks.cmake b/config/cmake_ext_mod/ConfigureChecks.cmake
index 2e99c94..a0ec8e3 100644
--- a/config/cmake_ext_mod/ConfigureChecks.cmake
+++ b/config/cmake_ext_mod/ConfigureChecks.cmake
@@ -198,18 +198,19 @@ endmacro ()
 #-----------------------------------------------------------------------------
 #  Check for the existence of certain header files
 #-----------------------------------------------------------------------------
-CHECK_INCLUDE_FILE_CONCAT ("sys/resource.h"  ${HDF_PREFIX}_HAVE_SYS_RESOURCE_H)
-CHECK_INCLUDE_FILE_CONCAT ("sys/time.h"      ${HDF_PREFIX}_HAVE_SYS_TIME_H)
-CHECK_INCLUDE_FILE_CONCAT ("unistd.h"        ${HDF_PREFIX}_HAVE_UNISTD_H)
+CHECK_INCLUDE_FILE_CONCAT ("sys/file.h"      ${HDF_PREFIX}_HAVE_SYS_FILE_H)
 CHECK_INCLUDE_FILE_CONCAT ("sys/ioctl.h"     ${HDF_PREFIX}_HAVE_SYS_IOCTL_H)
-CHECK_INCLUDE_FILE_CONCAT ("sys/stat.h"      ${HDF_PREFIX}_HAVE_SYS_STAT_H)
+CHECK_INCLUDE_FILE_CONCAT ("sys/resource.h"  ${HDF_PREFIX}_HAVE_SYS_RESOURCE_H)
 CHECK_INCLUDE_FILE_CONCAT ("sys/socket.h"    ${HDF_PREFIX}_HAVE_SYS_SOCKET_H)
+CHECK_INCLUDE_FILE_CONCAT ("sys/stat.h"      ${HDF_PREFIX}_HAVE_SYS_STAT_H)
+CHECK_INCLUDE_FILE_CONCAT ("sys/time.h"      ${HDF_PREFIX}_HAVE_SYS_TIME_H)
 CHECK_INCLUDE_FILE_CONCAT ("sys/types.h"     ${HDF_PREFIX}_HAVE_SYS_TYPES_H)
-CHECK_INCLUDE_FILE_CONCAT ("stddef.h"        ${HDF_PREFIX}_HAVE_STDDEF_H)
-CHECK_INCLUDE_FILE_CONCAT ("setjmp.h"        ${HDF_PREFIX}_HAVE_SETJMP_H)
 CHECK_INCLUDE_FILE_CONCAT ("features.h"      ${HDF_PREFIX}_HAVE_FEATURES_H)
 CHECK_INCLUDE_FILE_CONCAT ("dirent.h"        ${HDF_PREFIX}_HAVE_DIRENT_H)
+CHECK_INCLUDE_FILE_CONCAT ("setjmp.h"        ${HDF_PREFIX}_HAVE_SETJMP_H)
+CHECK_INCLUDE_FILE_CONCAT ("stddef.h"        ${HDF_PREFIX}_HAVE_STDDEF_H)
 CHECK_INCLUDE_FILE_CONCAT ("stdint.h"        ${HDF_PREFIX}_HAVE_STDINT_H)
+CHECK_INCLUDE_FILE_CONCAT ("unistd.h"        ${HDF_PREFIX}_HAVE_UNISTD_H)
 
 # IF the c compiler found stdint, check the C++ as well. On some systems this
 # file will be found by C but not C++, only do this test IF the C++ compiler
@@ -527,6 +528,8 @@ CHECK_FUNCTION_EXISTS (sigprocmask       ${HDF_PREFIX}_HAVE_SIGPROCMASK)
 CHECK_FUNCTION_EXISTS (snprintf          ${HDF_PREFIX}_HAVE_SNPRINTF)
 CHECK_FUNCTION_EXISTS (srandom           ${HDF_PREFIX}_HAVE_SRANDOM)
 CHECK_FUNCTION_EXISTS (strdup            ${HDF_PREFIX}_HAVE_STRDUP)
+CHECK_FUNCTION_EXISTS (strtoll           ${HDF_PREFIX}_HAVE_STRTOLL)
+CHECK_FUNCTION_EXISTS (strtoull          ${HDF_PREFIX}_HAVE_STRTOULL)
 CHECK_FUNCTION_EXISTS (symlink           ${HDF_PREFIX}_HAVE_SYMLINK)
 CHECK_FUNCTION_EXISTS (system            ${HDF_PREFIX}_HAVE_SYSTEM)
 
@@ -585,6 +588,7 @@ macro (HDF_CXX_FUNCTION_TEST OTHER_TEST)
         HAVE_UNISTD_H
         HAVE_SYS_TYPES_H
         HAVE_SYS_SOCKET_H
+        HAVE_SYS_FILE_H
     )
       if ("${${HDF_PREFIX}_${def}}")
         set (MACRO_CHECK_FUNCTION_DEFINITIONS "${MACRO_CHECK_FUNCTION_DEFINITIONS} -D${def}")
diff --git a/configure.ac b/configure.ac
index 2af7988..3e918db 100644
--- a/configure.ac
+++ b/configure.ac
@@ -1851,6 +1851,7 @@ AC_CHECK_FUNCS([frexpl gethostname getrusage gettimeofday])
 AC_CHECK_FUNCS([lstat rand_r random setsysinfo])
 AC_CHECK_FUNCS([signal longjmp setjmp siglongjmp sigsetjmp sigprocmask])
 AC_CHECK_FUNCS([snprintf srandom strdup symlink system])
+AC_CHECK_FUNCS([strtoll strtoull])
 AC_CHECK_FUNCS([tmpfile asprintf vasprintf vsnprintf waitpid])
 AC_CHECK_FUNCS([roundf lroundf llroundf round lround llround])
 
diff --git a/src/H5private.h b/src/H5private.h
index 00de96c..61ecc5b 100644
--- a/src/H5private.h
+++ b/src/H5private.h
@@ -1386,7 +1386,13 @@ typedef off_t               h5_stat_size_t;
 #ifndef HDstrtol
     #define HDstrtol(S,R,N)    strtol(S,R,N)
 #endif /* HDstrtol */
-H5_DLL int64_t HDstrtoll (const char *s, const char **rest, int base);
+#ifndef HDstrtoll
+    #ifdef H5_HAVE_STRTOLL
+        #define HDstrtoll(S,R,N)  strtoll(S,R,N)
+    #else
+        H5_DLL int64_t HDstrtoll (const char *s, const char **rest, int base);
+    #endif /* H5_HAVE_STRTOLL */
+#endif /* HDstrtoll */
 #ifndef HDstrtoul
     #define HDstrtoul(S,R,N)  strtoul(S,R,N)
 #endif /* HDstrtoul */
diff --git a/src/H5system.c b/src/H5system.c
index ac323c0..1f92e19 100644
--- a/src/H5system.c
+++ b/src/H5system.c
@@ -32,10 +32,10 @@
 /***********/
 /* Headers */
 /***********/
-#include "H5private.h"		/* Generic Functions			*/
-#include "H5Eprivate.h"		/* Error handling		  	*/
-#include "H5Fprivate.h"		/* File access				*/
-#include "H5MMprivate.h"	/* Memory management			*/
+#include "H5private.h"        /* Generic Functions            */
+#include "H5Eprivate.h"        /* Error handling              */
+#include "H5Fprivate.h"        /* File access                */
+#include "H5MMprivate.h"    /* Memory management            */
 
 
 /****************/
@@ -474,6 +474,7 @@ HDfprintf(FILE *stream, const char *fmt, ...)
  *
  *-------------------------------------------------------------------------
  */
+#ifndef HDstrtoll
 int64_t
 HDstrtoll(const char *s, const char **rest, int base)
 {
@@ -549,7 +550,7 @@ HDstrtoll(const char *s, const char **rest, int base)
         *rest = s;
     return acc;
 } /* end HDstrtoll() */
-
+#endif
 
 /*-------------------------------------------------------------------------
  * Function:  HDrand/HDsrand
@@ -604,7 +605,7 @@ void HDsrand(unsigned int seed)
 #ifdef H5_HAVE_FCNTL
 int
 Pflock(int fd, int operation) {
-    
+
     struct flock    flk;
 
     /* Set the lock type */
@@ -649,18 +650,18 @@ Nflock(int H5_ATTR_UNUSED fd, int H5_ATTR_UNUSED operation) {
 
 
 /*-------------------------------------------------------------------------
- * Function:	H5_make_time
+ * Function:    H5_make_time
  *
- * Purpose:	Portability routine to abstract converting a 'tm' struct into
- *		a time_t value.
+ * Purpose:    Portability routine to abstract converting a 'tm' struct into
+ *        a time_t value.
  *
- * Note:	This is a little problematic because mktime() operates on
- *		local times.  We convert to local time and then figure out the
- *		adjustment based on the local time zone and daylight savings
- *		setting.
+ * Note:    This is a little problematic because mktime() operates on
+ *        local times.  We convert to local time and then figure out the
+ *        adjustment based on the local time zone and daylight savings
+ *        setting.
  *
- * Return:	Success:  The value of timezone
- *		Failure:  -1
+ * Return:    Success:  The value of timezone
+ *        Failure:  -1
  *
  * Programmer:  Quincey Koziol
  *              November 18, 2015
@@ -1138,7 +1139,7 @@ H5_combine_path(const char* path1, const char* path2, char **full_name /*out*/)
         if(NULL == (*full_name = (char *)H5MM_strdup(path2)))
             HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL, "memory allocation failed")
 
-    } /* end if */ 
+    } /* end if */
     else if(H5_CHECK_ABS_PATH(path2)) {
 
         /* On windows path2 is a path absolute name */
diff --git a/src/H5win32defs.h b/src/H5win32defs.h
index b419f06..e005b51 100644
--- a/src/H5win32defs.h
+++ b/src/H5win32defs.h
@@ -23,6 +23,11 @@
  *
  */
 
+/*
+ * _MSC_VER = 1900 VS2015
+ * _MSC_VER = 1800 VS2013
+ * _MSC_VER = 1700 VS2012
+ */
 #ifdef H5_HAVE_WIN32_API
 
 typedef struct _stati64     h5_stat_t;
@@ -54,13 +59,22 @@ typedef __int64             h5_stat_size_t;
 #define HDsleep(S)          Sleep(S*1000)
 #define HDstat(S,B)         _stati64(S,B)
 #define HDstrcasecmp(A,B)   _stricmp(A,B)
-#define HDstrtoull(S,R,N)   _strtoui64(S,R,N)
 #define HDstrdup(S)         _strdup(S)
 #define HDtzset()           _tzset()
 #define HDunlink(S)         _unlink(S)
 #define HDwrite(F,M,Z)      _write(F,M,Z)
 
 #ifdef H5_HAVE_VISUAL_STUDIO
+
+#if (_MSC_VER < 1800)
+  #ifndef H5_HAVE_STRTOLL
+    #define HDstrtoll(S,R,N)    _strtoi64(S,R,N)
+  #endif /* H5_HAVE_STRTOLL */
+  #ifndef H5_HAVE_STRTOULL
+    #define HDstrtoull(S,R,N)   _strtoui64(S,R,N)
+  #endif /* H5_HAVE_STRTOULL */
+#endif /* MSC_VER < 1800 */
+
 /*
  * The (void*) cast just avoids a compiler warning in H5_HAVE_VISUAL_STUDIO
  */