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author | Quincey Koziol <koziol@hdfgroup.org> | 2002-03-26 19:54:25 (GMT) |
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committer | Quincey Koziol <koziol@hdfgroup.org> | 2002-03-26 19:54:25 (GMT) |
commit | f5df769bdf43cd58a7e4c7abc7ae61ada98630ed (patch) | |
tree | 9355bec40e40cd86a4bc09bb47389649aa0acfc3 | |
parent | ed22e8a5c05771824bf003f77bc4d6b0488cb238 (diff) | |
download | hdf5-f5df769bdf43cd58a7e4c7abc7ae61ada98630ed.zip hdf5-f5df769bdf43cd58a7e4c7abc7ae61ada98630ed.tar.gz hdf5-f5df769bdf43cd58a7e4c7abc7ae61ada98630ed.tar.bz2 |
[svn-r5081] Purpose:
Bug Fix
Description:
Regression test for following bug:
When reading a contiguous hyperslab that spanned the entire dataset and
was larger that the type conversion buffer, the hyperslab routines need
to fill the type conversion buffer and then return to the I/O routines.
When the I/O routines resume the hyperslab operation, it was possible to
have a combination of coordinates which caused the hyperslab iterator
to incorrectly advance in the file, causing some data to be re-read or
re-written.
Platforms tested:
Linux (eirene)
-rw-r--r-- | test/tselect.c | 156 |
1 files changed, 148 insertions, 8 deletions
diff --git a/test/tselect.c b/test/tselect.c index be254a8..8d34219 100644 --- a/test/tselect.c +++ b/test/tselect.c @@ -72,6 +72,14 @@ #define SPACE6_RANK 1 #define SPACE6_DIM1 (SPACE5_DIM1*SPACE5_DIM2*SPACE5_DIM3*SPACE5_DIM4*SPACE5_DIM5) +/* 4-D dataset with fixed dimensions */ +#define SPACE7_NAME "Space7" +#define SPACE7_RANK 4 +#define SPACE7_DIM1 11 +#define SPACE7_DIM2 13 +#define SPACE7_DIM3 17 +#define SPACE7_DIM4 19 + /* Element selection information */ #define POINT1_NPOINTS 10 @@ -1066,7 +1074,7 @@ test_select_hyper_stride(void) /* Free memory buffers */ free(wbuf); free(rbuf); -} /* test_select_hyper() */ +} /* test_select_hyper_stride() */ /**************************************************************** ** @@ -1075,7 +1083,7 @@ test_select_hyper_stride(void) ** ****************************************************************/ static void -test_select_hyper_contig(void) +test_select_hyper_contig(hid_t dset_type, hid_t xfer_plist) { hid_t fid1; /* HDF5 File IDs */ hid_t dataset; /* Dataset ID */ @@ -1132,10 +1140,10 @@ test_select_hyper_contig(void) CHECK(ret, FAIL, "H5Sselect_hyperslab"); /* Create a dataset */ - dataset=H5Dcreate(fid1,"Dataset1",H5T_STD_U16LE,sid1,H5P_DEFAULT); + dataset=H5Dcreate(fid1,"Dataset1",dset_type,sid1,H5P_DEFAULT); /* Write selection to disk */ - ret=H5Dwrite(dataset,H5T_NATIVE_USHORT,sid2,sid1,H5P_DEFAULT,wbuf); + ret=H5Dwrite(dataset,H5T_NATIVE_USHORT,sid2,sid1,xfer_plist,wbuf); CHECK(ret, FAIL, "H5Dwrite"); /* Close memory dataspace */ @@ -1163,12 +1171,13 @@ test_select_hyper_contig(void) CHECK(ret, FAIL, "H5Sselect_hyperslab"); /* Read selection from disk */ - ret=H5Dread(dataset,H5T_NATIVE_USHORT,sid2,sid1,H5P_DEFAULT,rbuf); + ret=H5Dread(dataset,H5T_NATIVE_USHORT,sid2,sid1,xfer_plist,rbuf); CHECK(ret, FAIL, "H5Dread"); /* Compare data read with data written out */ if(HDmemcmp(rbuf,wbuf,sizeof(uint16_t)*30*12)) { - printf("hyperslab values don't match!\n"); + num_errs++; + printf("Error: hyperslab values don't match!\n"); #ifdef QAK for(i=0, tbuf=wbuf; i<12; i++) for(j=0; j<30; j++) @@ -1195,7 +1204,131 @@ test_select_hyper_contig(void) /* Free memory buffers */ free(wbuf); free(rbuf); -} /* test_select_hyper() */ +} /* test_select_hyper_contig() */ + +/**************************************************************** +** +** test_select_hyper_contig2(): Test H5S (dataspace) selection code. +** Tests more contiguous hyperslabs of various sizes and dimensionalities. +** +****************************************************************/ +static void +test_select_hyper_contig2(hid_t dset_type, hid_t xfer_plist) +{ + hid_t fid1; /* HDF5 File IDs */ + hid_t dataset; /* Dataset ID */ + hid_t sid1,sid2; /* Dataspace ID */ + hsize_t dims2[] = {SPACE7_DIM4, SPACE7_DIM3, SPACE7_DIM2, SPACE7_DIM1}; + hssize_t start[SPACE7_RANK]; /* Starting location of hyperslab */ + hsize_t stride[SPACE7_RANK]; /* Stride of hyperslab */ + hsize_t count[SPACE7_RANK]; /* Element count of hyperslab */ + hsize_t block[SPACE7_RANK]; /* Block size of hyperslab */ + uint16_t *wbuf, /* buffer to write to disk */ + *rbuf, /* buffer read from disk */ + *tbuf; /* temporary buffer pointer */ + int i,j,k,l; /* Counters */ + herr_t ret; /* Generic return value */ + + /* Output message about test being performed */ + MESSAGE(5, ("Testing More Contiguous Hyperslabs Functionality\n")); + + /* Allocate write & read buffers */ + wbuf=malloc(sizeof(uint16_t)*SPACE7_DIM1*SPACE7_DIM2*SPACE7_DIM3*SPACE7_DIM4); + rbuf=calloc(sizeof(uint16_t),SPACE7_DIM1*SPACE7_DIM2*SPACE7_DIM3*SPACE7_DIM4); + + /* Initialize write buffer */ + for(i=0, tbuf=wbuf; i<SPACE7_DIM1; i++) + for(j=0; j<SPACE7_DIM2; j++) + for(k=0; k<SPACE7_DIM3; k++) + for(l=0; l<SPACE7_DIM4; l++) + *tbuf++=(uint16_t)((i*SPACE7_DIM2)+j); + + /* Create file */ + fid1 = H5Fcreate(FILENAME, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT); + CHECK(fid1, FAIL, "H5Fcreate"); + + /* Create dataspace for dataset */ + sid1 = H5Screate_simple(SPACE7_RANK, dims2, NULL); + CHECK(sid1, FAIL, "H5Screate_simple"); + + /* Create dataspace for writing buffer */ + sid2 = H5Screate_simple(SPACE7_RANK, dims2, NULL); + CHECK(sid2, FAIL, "H5Screate_simple"); + + /* Select contiguous hyperslab for disk dataset */ + start[0]=0; start[1]=0; start[2]=0; start[3]=0; + count[0]=2; count[1]=SPACE7_DIM3; count[2]=SPACE7_DIM2; count[3]=SPACE7_DIM1; + ret = H5Sselect_hyperslab(sid1,H5S_SELECT_SET,start,NULL,count,NULL); + CHECK(ret, FAIL, "H5Sselect_hyperslab"); + + /* Select contiguous hyperslab in memory */ + start[0]=0; start[1]=0; start[2]=0; start[3]=0; + count[0]=2; count[1]=SPACE7_DIM3; count[2]=SPACE7_DIM2; count[3]=SPACE7_DIM1; + ret = H5Sselect_hyperslab(sid2,H5S_SELECT_SET,start,NULL,count,NULL); + CHECK(ret, FAIL, "H5Sselect_hyperslab"); + + /* Create a dataset */ + dataset=H5Dcreate(fid1,"Dataset1",dset_type,sid1,H5P_DEFAULT); + + /* Write selection to disk */ + ret=H5Dwrite(dataset,H5T_NATIVE_USHORT,sid2,sid1,xfer_plist,wbuf); + CHECK(ret, FAIL, "H5Dwrite"); + + /* Close memory dataspace */ + ret = H5Sclose(sid2); + CHECK(ret, FAIL, "H5Sclose"); + + /* Create dataspace for reading buffer */ + sid2 = H5Screate_simple(SPACE7_RANK, dims2, NULL); + CHECK(sid2, FAIL, "H5Screate_simple"); + + /* Select 6x5 count with a stride of 2x6 & 2x6 block hyperslab for disk dataset */ + start[0]=0; start[1]=0; start[2]=0; start[3]=0; + count[0]=2; count[1]=SPACE7_DIM3; count[2]=SPACE7_DIM2; count[3]=SPACE7_DIM1; + ret = H5Sselect_hyperslab(sid1,H5S_SELECT_SET,start,NULL,count,NULL); + CHECK(ret, FAIL, "H5Sselect_hyperslab"); + + /* Select 3x15 count with a stride of 4x2 & 4x2 block hyperslab for memory dataset */ + start[0]=0; start[1]=0; start[2]=0; start[3]=0; + count[0]=2; count[1]=SPACE7_DIM3; count[2]=SPACE7_DIM2; count[3]=SPACE7_DIM1; + ret = H5Sselect_hyperslab(sid2,H5S_SELECT_SET,start,NULL,count,NULL); + CHECK(ret, FAIL, "H5Sselect_hyperslab"); + + /* Read selection from disk */ + ret=H5Dread(dataset,H5T_NATIVE_USHORT,sid2,sid1,xfer_plist,rbuf); + CHECK(ret, FAIL, "H5Dread"); + + /* Compare data read with data written out */ + if(HDmemcmp(rbuf,wbuf,sizeof(uint16_t)*2*SPACE7_DIM3*SPACE7_DIM2*SPACE7_DIM1)) { + num_errs++; + printf("Error: hyperslab values don't match!\n"); +#ifdef QAK + for(i=0, tbuf=wbuf; i<12; i++) + for(j=0; j<30; j++) + printf("i=%d, j=%d, *wbuf=%u, *rbuf=%u\n",i,j,(unsigned)*(wbuf+i*30+j),(unsigned)*(rbuf+i*30+j)); +#endif /* QAK */ + } /* end if */ + + /* Close memory dataspace */ + ret = H5Sclose(sid2); + CHECK(ret, FAIL, "H5Sclose"); + + /* Close disk dataspace */ + ret = H5Sclose(sid1); + CHECK(ret, FAIL, "H5Sclose"); + + /* Close Dataset */ + ret = H5Dclose(dataset); + CHECK(ret, FAIL, "H5Dclose"); + + /* Close file */ + ret = H5Fclose(fid1); + CHECK(ret, FAIL, "H5Fclose"); + + /* Free memory buffers */ + free(wbuf); + free(rbuf); +} /* test_select_hyper_contig2() */ /**************************************************************** ** @@ -3266,7 +3399,14 @@ test_select(void) /* These next tests use the same file */ test_select_combo(); /* Test combined hyperslab & element selection code */ test_select_hyper_stride(); /* Test strided hyperslab selection code */ - test_select_hyper_contig(); /* Test contiguous hyperslab selection code */ + test_select_hyper_contig(H5T_STD_U16LE,H5P_DEFAULT); /* Test contiguous hyperslab selection code */ + test_select_hyper_contig(H5T_STD_U16LE,plist_id); /* Test contiguous hyperslab selection code */ + test_select_hyper_contig(H5T_STD_U16BE,H5P_DEFAULT); /* Test contiguous hyperslab selection code */ + test_select_hyper_contig(H5T_STD_U16BE,plist_id); /* Test contiguous hyperslab selection code */ + test_select_hyper_contig2(H5T_STD_U16LE,H5P_DEFAULT); /* Test more contiguous hyperslab selection cases */ + test_select_hyper_contig2(H5T_STD_U16LE,plist_id); /* Test more contiguous hyperslab selection cases */ + test_select_hyper_contig2(H5T_STD_U16BE,H5P_DEFAULT); /* Test more contiguous hyperslab selection cases */ + test_select_hyper_contig2(H5T_STD_U16BE,plist_id); /* Test more contiguous hyperslab selection cases */ test_select_hyper_copy(); /* Test hyperslab selection copying code */ test_select_point_copy(); /* Test point selection copying code */ test_select_hyper_offset(); /* Test selection offset code with hyperslabs */ |