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authorQuincey Koziol <koziol@hdfgroup.org>2011-04-15 19:25:36 (GMT)
committerQuincey Koziol <koziol@hdfgroup.org>2011-04-15 19:25:36 (GMT)
commit531f24926c362c5f091ccc511c1c0e55dea391c8 (patch)
treead1ba2a11d79de1846006380c25cd9fa6f210598
parenta3a0794eb34e4b0464fa8fbce4ed2b3c8338825b (diff)
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[svn-r20517] Description:
Bring r20513 from trunk to 1.8 branch: Correct several problems with compound datatypes that don't have any fields added: - Change assertion to error report when a file is encountered which has this situation. - Added check to attribute creation to avoid creating attributes with a datatype like this (datasets and named datatypes already have the check) Tested on: FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (amani) w/Intel compilers, w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, w/threadsafe, in production mode Linux/PPC 2.6 (heiwa) w/C++ & FORTRAN, w/threadsafe, in debug mode
-rw-r--r--MANIFEST2
-rw-r--r--release_docs/RELEASE.txt4
-rw-r--r--src/H5A.c10
-rw-r--r--src/H5Odtype.c5
-rw-r--r--test/bad_compound.h5bin0 -> 2208 bytes
-rw-r--r--test/dtypes.c130
-rw-r--r--test/gen_bad_compound.c86
7 files changed, 232 insertions, 5 deletions
diff --git a/MANIFEST b/MANIFEST
index 229e8e2..97d6690 100644
--- a/MANIFEST
+++ b/MANIFEST
@@ -785,6 +785,7 @@
./test/Makefile.in
./test/accum.c
./test/app_ref.c
+./test/bad_compound.h5
./test/be_data.h5
./test/be_extlink1.h5
./test/be_extlink2.h5
@@ -824,6 +825,7 @@
./test/flush1.c
./test/flush2.c
./test/gen_bad_ohdr.c _DO_NOT_DISTRIBUTE_
+./test/gen_bad_compound.c _DO_NOT_DISTRIBUTE_
./test/gen_bogus.c _DO_NOT_DISTRIBUTE_
./test/gen_cross.c _DO_NOT_DISTRIBUTE_
./test/gen_deflate.c _DO_NOT_DISTRIBUTE_
diff --git a/release_docs/RELEASE.txt b/release_docs/RELEASE.txt
index 7ed95ac..716140d 100644
--- a/release_docs/RELEASE.txt
+++ b/release_docs/RELEASE.txt
@@ -119,6 +119,10 @@ Bug Fixes since HDF5-1.8.6
Library
-------
+ - Changed assertion failure when decoding a compound datatype with no
+ fields into a normal error failure. Also prohibit using this sort
+ of datatype for creating an attribute (as is already the case for
+ datasets and named datatypes). (QAK - 2011/04/15, Jira issue #HDFFV-2766)
- Tell the VFL flush call that the file will be closing, allowing
the VFDs to avoid sync'ing the file (particularly valuable in parallel).
(QAK - 2011/03/09)
diff --git a/src/H5A.c b/src/H5A.c
index 1c75e46..666a2a8 100644
--- a/src/H5A.c
+++ b/src/H5A.c
@@ -389,14 +389,18 @@ H5A_create(const H5G_loc_t *loc, const char *name, const H5T_t *type,
/* Check if the dataspace has an extent set (or is NULL) */
if(!(H5S_has_extent(space)))
- HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "dataspace extent has not been set")
+ HGOTO_ERROR(H5E_ATTR, H5E_BADVALUE, FAIL, "dataspace extent has not been set")
+
+ /* Check if the datatype is "sensible" for use in a dataset */
+ if(H5T_is_sensible(type) != TRUE)
+ HGOTO_ERROR(H5E_ATTR, H5E_BADTYPE, FAIL, "datatype is not sensible")
/* Build the attribute information */
if(NULL == (attr = H5FL_CALLOC(H5A_t)))
- HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL, "memory allocation failed for attribute info")
+ HGOTO_ERROR(H5E_ATTR, H5E_CANTALLOC, FAIL, "memory allocation failed for attribute info")
if(NULL == (attr->shared = H5FL_CALLOC(H5A_shared_t)))
- HGOTO_ERROR(H5E_FILE, H5E_NOSPACE, FAIL, "can't allocate shared attr structure")
+ HGOTO_ERROR(H5E_ATTR, H5E_CANTALLOC, FAIL, "can't allocate shared attr structure")
/* If the creation property list is H5P_DEFAULT, use the default character encoding */
if(acpl_id == H5P_DEFAULT)
diff --git a/src/H5Odtype.c b/src/H5Odtype.c
index 51694a3..f419e44 100644
--- a/src/H5Odtype.c
+++ b/src/H5Odtype.c
@@ -268,12 +268,13 @@ H5O_dtype_decode_helper(H5F_t *f, unsigned *ioflags/*in,out*/, const uint8_t **p
* Compound datatypes...
*/
dt->shared->u.compnd.nmembs = flags & 0xffff;
- HDassert(dt->shared->u.compnd.nmembs > 0);
+ if(dt->shared->u.compnd.nmembs == 0)
+ HGOTO_ERROR(H5E_DATATYPE, H5E_BADVALUE, FAIL, "invalid number of members: %u", dt->shared->u.compnd.nmembs)
dt->shared->u.compnd.nalloc = dt->shared->u.compnd.nmembs;
dt->shared->u.compnd.memb = (H5T_cmemb_t *)H5MM_calloc(dt->shared->u.compnd.nalloc * sizeof(H5T_cmemb_t));
dt->shared->u.compnd.memb_size = 0;
if(NULL == dt->shared->u.compnd.memb)
- HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL, "memory allocation failed")
+ HGOTO_ERROR(H5E_DATATYPE, H5E_CANTALLOC, FAIL, "memory allocation failed")
for(i = 0; i < dt->shared->u.compnd.nmembs; i++) {
unsigned ndims = 0; /* Number of dimensions of the array field */
htri_t can_upgrade; /* Whether we can upgrade this type's version */
diff --git a/test/bad_compound.h5 b/test/bad_compound.h5
new file mode 100644
index 0000000..1834a2e
--- /dev/null
+++ b/test/bad_compound.h5
Binary files differ
diff --git a/test/dtypes.c b/test/dtypes.c
index c4871d1..8ceb252 100644
--- a/test/dtypes.c
+++ b/test/dtypes.c
@@ -23,6 +23,7 @@
#include <math.h>
#include <time.h>
#include "h5test.h"
+#include "H5srcdir.h"
#include "H5Iprivate.h" /* For checking that datatype id's don't leak */
/* Number of elements in each test */
@@ -81,6 +82,8 @@ const char *FILENAME[] = {
NULL
};
+#define TESTFILE "bad_compound.h5"
+
typedef struct complex_t {
double re;
double im;
@@ -3127,6 +3130,132 @@ error:
/*-------------------------------------------------------------------------
+ * Function: test_compound_18
+ *
+ * Purpose: Tests that library fails correctly when opening a dataset
+ * a compound datatype with zero fields.
+ *
+ * Return: Success: 0
+ * Failure: number of errors
+ *
+ * Programmer: Quincey Koziol
+ * Thursday, April 14, 2011
+ *
+ *-------------------------------------------------------------------------
+ */
+static int
+test_compound_18(void)
+{
+ hid_t file = -1;
+ hid_t gid = -1;
+ hid_t did = -1;
+ hid_t aid = -1;
+ hid_t tid = -1;
+ hid_t sid = -1;
+ hsize_t dim = 1;
+ const char *testfile = H5_get_srcdir_filename(TESTFILE); /* Corrected test file name */
+ char filename[1024];
+ herr_t ret;
+
+ TESTING("accessing objects with compound datatypes that have no fields");
+
+ /* Create compound datatype, but don't insert fields */
+ tid = H5Tcreate(H5T_COMPOUND, (size_t)8);
+ assert(tid > 0);
+
+ /* Attempt to create file with compound datatype that has no fields */
+ /* Create File */
+ h5_fixname(FILENAME[3], H5P_DEFAULT, filename, sizeof filename);
+ if((file = H5Fcreate(filename, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR
+
+ /* Create a dataspace to use */
+ sid = H5Screate_simple(1, &dim, NULL);
+ assert(sid > 0);
+
+ /* Create a dataset with the bad compound datatype */
+ H5E_BEGIN_TRY {
+ did = H5Dcreate2(file, "dataset", tid, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ } H5E_END_TRY;
+ if(did > 0) {
+ H5Dclose(did);
+ FAIL_PUTS_ERROR("created dataset with bad compound datatype")
+ } /* end if */
+
+ /* Create a group */
+ gid = H5Gcreate2(file, "group", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ assert(gid > 0);
+
+ /* Create an attribute with the bad compound datatype */
+ H5E_BEGIN_TRY {
+ aid = H5Acreate2(gid, "attr", tid, sid, H5P_DEFAULT, H5P_DEFAULT);
+ } H5E_END_TRY;
+ if(aid > 0) {
+ H5Aclose(aid);
+ FAIL_PUTS_ERROR("created attribute with bad compound datatype")
+ } /* end if */
+
+ /* Commit the datatype */
+ H5E_BEGIN_TRY {
+ ret = H5Tcommit2(file, "cmpnd", tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ } H5E_END_TRY;
+ if(ret >= 0) {
+ FAIL_PUTS_ERROR("committed named datatype with bad compound datatype")
+ } /* end if */
+
+ /* Close IDs */
+ if(H5Tclose(tid) < 0) FAIL_STACK_ERROR
+ if(H5Sclose(sid) < 0) FAIL_STACK_ERROR
+ if(H5Gclose(gid) < 0) FAIL_STACK_ERROR
+ if(H5Fclose(file) < 0) FAIL_STACK_ERROR
+
+
+ /* Open Generated File */
+ /* (generated with gen_bad_compound.c) */
+ if((file = H5Fopen(testfile, H5F_ACC_RDONLY, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR
+
+ /* Try to open the datatype */
+ H5E_BEGIN_TRY {
+ tid = H5Topen2(file, "cmpnd", H5P_DEFAULT);
+ } H5E_END_TRY;
+ if(tid > 0) {
+ H5Tclose(tid);
+ FAIL_PUTS_ERROR("opened named datatype with bad compound datatype")
+ } /* end if */
+
+ /* Try to open the dataset */
+ H5E_BEGIN_TRY {
+ did = H5Dopen2(file, "dataset", H5P_DEFAULT);
+ } H5E_END_TRY;
+ if(did > 0) {
+ H5Dclose(did);
+ FAIL_PUTS_ERROR("opened dataset with bad compound datatype")
+ } /* end if */
+
+ /* Open the group with the attribute */
+ if((gid = H5Gopen2(file, "group", H5P_DEFAULT)) < 0) TEST_ERROR
+
+ /* Try to open the dataset */
+ H5E_BEGIN_TRY {
+ aid = H5Aopen(gid, "attr", H5P_DEFAULT);
+ } H5E_END_TRY;
+ if(aid > 0) {
+ H5Aclose(aid);
+ FAIL_PUTS_ERROR("opened attribute with bad compound datatype")
+ } /* end if */
+
+ /* Close IDs */
+ if(H5Gclose(gid) < 0) FAIL_STACK_ERROR
+ if(H5Fclose(file) < 0) FAIL_STACK_ERROR
+
+ PASSED();
+ return 0;
+
+error:
+ return 1;
+} /* end test_compound_18() */
+
+
+/*-------------------------------------------------------------------------
* Function: test_query
*
* Purpose: Tests query functions of compound and enumeration types.
@@ -6533,6 +6662,7 @@ main(void)
nerrors += test_compound_15();
nerrors += test_compound_16();
nerrors += test_compound_17();
+ nerrors += test_compound_18();
nerrors += test_conv_enum_1();
nerrors += test_conv_enum_2();
nerrors += test_conv_bitfield();
diff --git a/test/gen_bad_compound.c b/test/gen_bad_compound.c
new file mode 100644
index 0000000..b864195
--- /dev/null
+++ b/test/gen_bad_compound.c
@@ -0,0 +1,86 @@
+/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
+ * Copyright by The HDF Group. *
+ * Copyright by the Board of Trustees of the University of Illinois. *
+ * All rights reserved. *
+ * *
+ * This file is part of HDF5. The full HDF5 copyright notice, including *
+ * terms governing use, modification, and redistribution, is contained in *
+ * the files COPYING and Copyright.html. COPYING can be found at the root *
+ * of the source code distribution tree; Copyright.html can be found at the *
+ * root level of an installed copy of the electronic HDF5 document set and *
+ * is linked from the top-level documents page. It can also be found at *
+ * http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have *
+ * access to either file, you may request a copy from help@hdfgroup.org. *
+ * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
+
+/*
+ * Programmer: Quincey Koziol <koziol@hdfgroup.org>
+ * April 14, 2011
+ *
+ * Purpose: This program is run to generate an HDF5 data file with objects
+ * that use compound datatypes with no fields (now forbidden to
+ * be created by the library, as of v1.4.x). It must be built/run
+ * with a copy of the 1.2.x library.
+ */
+
+#include <assert.h>
+#include "hdf5.h"
+
+#define FILENAME "bad_compound.h5"
+
+int main()
+{
+ hid_t file;
+ hid_t cmpd_dt;
+ hid_t sid;
+ hid_t did;
+ hid_t aid;
+ hid_t gid;
+ hsize_t dim = 1;
+ herr_t ret;
+
+ /* Create compound datatype, but don't insert fields */
+ cmpd_dt = H5Tcreate(H5T_COMPOUND, (size_t)8);
+ assert(cmpd_dt > 0);
+
+ /* Create File */
+ file = H5Fcreate(FILENAME, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
+ assert(file > 0);
+
+ /* Create a dataspace to use */
+ sid = H5Screate_simple(1, &dim, NULL);
+ assert(sid > 0);
+
+ /* Create a dataset with the bad compound datatype */
+ did = H5Dcreate(file, "dataset", cmpd_dt, sid, H5P_DEFAULT);
+ assert(did > 0);
+
+ /* Create a group */
+ gid = H5Gcreate(file, "group", (size_t)0);
+ assert(gid > 0);
+
+ /* Create an attribute with the bad compound datatype */
+ aid = H5Acreate(gid, "attr", cmpd_dt, sid, H5P_DEFAULT);
+ assert(aid > 0);
+
+ /* Commit the datatype */
+ ret = H5Tcommit(file, "cmpnd", cmpd_dt);
+ assert(ret >= 0);
+
+ /* Close IDs */
+ ret = H5Gclose(gid);
+ assert(ret >= 0);
+ ret = H5Aclose(aid);
+ assert(ret >= 0);
+ ret = H5Sclose(sid);
+ assert(ret >= 0);
+ ret = H5Dclose(did);
+ assert(ret >= 0);
+ ret = H5Tclose(cmpd_dt);
+ assert(ret >= 0);
+ ret = H5Fclose(file);
+ assert(ret >= 0);
+
+ return(0);
+}
+