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author | Vailin Choi <vchoi@jam.ad.hdfgroup.org> | 2017-09-07 20:59:49 (GMT) |
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committer | Vailin Choi <vchoi@jam.ad.hdfgroup.org> | 2017-09-07 20:59:49 (GMT) |
commit | b15011a59af9e70eb06865234f8f0dacab34aa0f (patch) | |
tree | 4f557e5fc7311cb5db782abc94a19f08e53d0b29 | |
parent | d7c76e3aacd6f5966725516b0049f62e2efea586 (diff) | |
download | hdf5-b15011a59af9e70eb06865234f8f0dacab34aa0f.zip hdf5-b15011a59af9e70eb06865234f8f0dacab34aa0f.tar.gz hdf5-b15011a59af9e70eb06865234f8f0dacab34aa0f.tar.bz2 |
Fix for HDFFV-9947
Fix to return error when encoding dataspace selection exceeds 32 bit integer limit.
-rw-r--r-- | src/H5Shyper.c | 55 | ||||
-rw-r--r-- | src/H5Spkg.h | 3 | ||||
-rw-r--r-- | src/H5Spoint.c | 24 | ||||
-rw-r--r-- | test/th5s.c | 97 |
4 files changed, 160 insertions, 19 deletions
diff --git a/src/H5Shyper.c b/src/H5Shyper.c index 32f6200..09d450f 100644 --- a/src/H5Shyper.c +++ b/src/H5Shyper.c @@ -2071,21 +2071,53 @@ H5S_hyper_serialize (const H5S_t *space, uint8_t *buf) { const H5S_hyper_dim_t *diminfo; /* Alias for dataspace's diminfo information */ hsize_t tmp_count[H5O_LAYOUT_NDIMS]; /* Temporary hyperslab counts */ - hsize_t offset[H5O_LAYOUT_NDIMS]; /* Offset of element in dataspace */ - hsize_t start[H5O_LAYOUT_NDIMS]; /* Location of start of hyperslab */ - hsize_t end[H5O_LAYOUT_NDIMS]; /* Location of end of hyperslab */ - hsize_t temp_off; /* Offset in a given dimension */ + hsize_t offset[H5O_LAYOUT_NDIMS]; /* Offset of element in dataspace */ + hsize_t start[H5O_LAYOUT_NDIMS]; /* Location of start of hyperslab */ + hsize_t end[H5O_LAYOUT_NDIMS]; /* Location of end of hyperslab */ + hsize_t bounds_start[H5S_MAX_RANK]; /* Selection bounds */ + hsize_t bounds_end[H5S_MAX_RANK]; /* Selection bounds */ + hsize_t temp_off; /* Offset in a given dimension */ uint8_t *lenp; /* pointer to length location for later storage */ uint32_t len = 0; /* number of bytes used */ hsize_t block_count; /* block counter for regular hyperslabs */ unsigned fast_dim; /* Rank of the fastest changing dimension for the dataspace */ unsigned ndims; /* Rank of the dataspace */ int done; /* Whether we are done with the iteration */ + unsigned u; /* Local index variable */ + herr_t ret_value = SUCCEED; /* Return value */ - FUNC_ENTER_NOAPI_NOINIT_NOERR + FUNC_ENTER_NOAPI_NOINIT HDassert(space); + /* Set some convienence values */ + ndims = space->extent.rank; + fast_dim = ndims - 1; + diminfo=space->select.sel_info.hslab->opt_diminfo; + + /* Calculate the # of blocks */ + if(H5S_hyper_is_regular(space)) { + /* Check each dimension */ + for(block_count = 1, u = 0; u < ndims; u++) + block_count *= diminfo[u].count; + } /* end if */ + else + /* Spin through hyperslab spans */ + block_count = H5S_hyper_span_nblocks(space->select.sel_info.hslab->span_lst); + + /* Get bounding box */ + if(H5S_hyper_bounds(space, bounds_start, bounds_end) < 0) + HGOTO_ERROR(H5E_DATASPACE, H5E_CANTGET, FAIL, "can't get selection bounds") + + /* Determine whether the number of blocks or the high bounds in the selection exceed (2^32 - 1) */ + if(block_count > H5S_UINT32_MAX) + HGOTO_ERROR(H5E_DATASPACE, H5E_BADVALUE, FAIL, "invalid number of blocks in selection") + else { + for(u = 0; u < ndims; u++) + if(bounds_end[u] > H5S_UINT32_MAX) + HGOTO_ERROR(H5E_DATASPACE, H5E_BADVALUE, FAIL, "invalid hyperslab selection") + } + /* Store the preamble information */ UINT32ENCODE(buf, (uint32_t)H5S_GET_SELECT_TYPE(space)); /* Store the type of selection */ UINT32ENCODE(buf, (uint32_t)1); /* Store the version number */ @@ -2101,15 +2133,6 @@ H5S_hyper_serialize (const H5S_t *space, uint8_t *buf) if(space->select.sel_info.hslab->diminfo_valid) { unsigned u; /* Local counting variable */ - /* Set some convienence values */ - ndims = space->extent.rank; - fast_dim = ndims - 1; - diminfo=space->select.sel_info.hslab->opt_diminfo; - - /* Check each dimension */ - for(block_count = 1, u = 0; u < ndims; u++) - block_count *= diminfo[u].count; - /* Encode number of hyperslabs */ H5_CHECK_OVERFLOW(block_count, hsize_t, uint32_t); UINT32ENCODE(buf, (uint32_t)block_count); @@ -2188,7 +2211,6 @@ H5S_hyper_serialize (const H5S_t *space, uint8_t *buf) } /* end if */ else { /* Encode number of hyperslabs */ - block_count = H5S_hyper_span_nblocks(space->select.sel_info.hslab->span_lst); H5_CHECK_OVERFLOW(block_count, hsize_t, uint32_t); UINT32ENCODE(buf, (uint32_t)block_count); len+=4; @@ -2204,7 +2226,8 @@ H5S_hyper_serialize (const H5S_t *space, uint8_t *buf) /* Encode length */ UINT32ENCODE(lenp, (uint32_t)len); /* Store the length of the extra information */ - FUNC_LEAVE_NOAPI(SUCCEED) +done: + FUNC_LEAVE_NOAPI(ret_value) } /* H5S_hyper_serialize() */ diff --git a/src/H5Spkg.h b/src/H5Spkg.h index 2fa872b..0597994 100644 --- a/src/H5Spkg.h +++ b/src/H5Spkg.h @@ -46,6 +46,9 @@ * and 'size' callbacks for places to change when updating this. */ #define H5O_SDSPACE_VERSION_LATEST H5O_SDSPACE_VERSION_2 +/* Maximum values for uint16_t and uint32_t */ +#define H5S_UINT16_MAX 65535 /* 2^16 - 1 */ +#define H5S_UINT32_MAX 4294967295 /* 2^32 - 1 */ /* * Dataspace extent information diff --git a/src/H5Spoint.c b/src/H5Spoint.c index 36684ea..e1dbb4d 100644 --- a/src/H5Spoint.c +++ b/src/H5Spoint.c @@ -821,12 +821,29 @@ H5S_point_serialize (const H5S_t *space, uint8_t *buf) H5S_pnt_node_t *curr; /* Point information nodes */ uint8_t *lenp; /* pointer to length location for later storage */ uint32_t len=0; /* number of bytes used */ - unsigned u; /* local counting variable */ + unsigned u; /* local counting variable */ + hsize_t bounds_start[H5S_MAX_RANK]; /* Selection bounding box */ + hsize_t bounds_end[H5S_MAX_RANK]; /* Selection bounding box */ + herr_t ret_value = SUCCEED; /* Return value */ - FUNC_ENTER_NOAPI_NOINIT_NOERR + FUNC_ENTER_NOAPI_NOINIT HDassert(space); + /* Get bounding box for the selection */ + HDmemset(bounds_end, 0, sizeof(bounds_end)); + if(H5S_point_bounds(space, bounds_start, bounds_end) < 0) + HGOTO_ERROR(H5E_DATASPACE, H5E_CANTGET, FAIL, "can't get selection bounds") + + /* Determine whether the number of points or the high bounds in the selection exceed (2^32 - 1) */ + if(space->select.num_elem > H5S_UINT32_MAX) + HGOTO_ERROR(H5E_DATASPACE, H5E_BADVALUE, FAIL, "invalid number of points in selection") + else { + for(u = 0; u < space->extent.rank; u++) + if(bounds_end[u] > H5S_UINT32_MAX) + HGOTO_ERROR(H5E_DATASPACE, H5E_BADVALUE, FAIL, "invalid points selection") + } + /* Store the preamble information */ UINT32ENCODE(buf, (uint32_t)H5S_GET_SELECT_TYPE(space)); /* Store the type of selection */ UINT32ENCODE(buf, (uint32_t)1); /* Store the version number */ @@ -858,7 +875,8 @@ H5S_point_serialize (const H5S_t *space, uint8_t *buf) /* Encode length */ UINT32ENCODE(lenp, (uint32_t)len); /* Store the length of the extra information */ - FUNC_LEAVE_NOAPI(SUCCEED) +done: + FUNC_LEAVE_NOAPI(ret_value) } /* H5S_point_serialize() */ diff --git a/test/th5s.c b/test/th5s.c index 98be156..c56f0cc 100644 --- a/test/th5s.c +++ b/test/th5s.c @@ -1317,6 +1317,102 @@ test_h5s_encode(void) /**************************************************************** ** +** test_h5s_encode_exceed32(): +** Verify that encoding selection that exceeds (2^32 - 1) +** (32 bit integer limit) will return error. +** See HDFFV-9947 and the RFC for "H5Sencode/H5Sdecode Format Change" +** +****************************************************************/ +static void +test_h5s_encode_exceed32(void) +{ + hid_t sid; /* Dataspace ID */ + size_t hyper_buf_size=0, pt_buf_size=0; /* Buffer size for H5Sencode */ + unsigned char *hyper_buf=NULL, *pt_buf=NULL; /* Buffers for H5Sencode */ + hsize_t numparticles = 8388608; + unsigned num_dsets = 513; + hsize_t total_particles = numparticles * num_dsets; + hsize_t vdsdims[1] = {total_particles}; + hsize_t start, count, block; /* Hyperslab selection specification */ + hsize_t coord[4]; /* Coordinates for point selection */ + herr_t ret; /* Generic return value */ + + /* Output message about test being performed */ + MESSAGE(5, ("Testing Dataspace Encoding Exceeding 32 bits integer limit\n")); + + /*------------------------------------------------------------------------- + * Test encoding and decoding of simple dataspace and hyperslab selection. + *------------------------------------------------------------------------- + */ + + /* Create dataspace */ + sid = H5Screate_simple(1, vdsdims, NULL); + CHECK(sid, FAIL, "H5Screate_simple"); + + start = 0; + block = total_particles; /* 4303355904 (exceeds 2^32) */ + count = 1; + + ret = H5Sselect_hyperslab(sid, H5S_SELECT_SET, &start, NULL, &count, &block); + CHECK(ret, FAIL, "H5Sselect_hyperslab"); + + /* Encode data space in a buffer */ + ret = H5Sencode(sid, NULL, &hyper_buf_size); + CHECK(ret, FAIL, "H5Sencode"); + + /* Allocate buffer */ + if(hyper_buf_size > 0) { + hyper_buf = (unsigned char*)HDcalloc((size_t)1, hyper_buf_size); + CHECK(hyper_buf, NULL, "HDcalloc"); + } + + /* H5Sencode should fail because block exceeds (2^32 - 1) */ + H5E_BEGIN_TRY { + ret = H5Sencode(sid, hyper_buf, &hyper_buf_size); + } H5E_END_TRY + VERIFY(ret, FAIL, "H5Sencode"); + + /*------------------------------------------------------------------------- + * Test encoding and decoding of simple dataspace and points selection. + *------------------------------------------------------------------------- + */ + + /* Select points in dataspace */ + coord[0] = 5; + coord[1] = 15; + coord[2] = 4294967296; /* 2^32 */ + coord[3] = 19; + ret = H5Sselect_elements(sid, H5S_SELECT_SET, (size_t)4, coord); + CHECK(ret, FAIL, "H5Sselect_elements"); + + /* Encode data space in a buffer */ + ret = H5Sencode(sid, NULL, &pt_buf_size); + CHECK(ret, FAIL, "H5Sencode"); + + /* Allocate buffer */ + if(pt_buf_size > 0) + pt_buf = (unsigned char*)HDcalloc((size_t)1, pt_buf_size); + + /* H5Sencode should fail because coord[2] exceeds (2^32 - 1) */ + H5E_BEGIN_TRY { + ret = H5Sencode(sid, pt_buf, &pt_buf_size); + } H5E_END_TRY + VERIFY(ret, FAIL, "H5Sencode"); + + /* Close the dataspace */ + ret = H5Sclose(sid); + CHECK(ret, FAIL, "H5Sclose"); + + /* Free the buffers */ + if(hyper_buf) + HDfree(hyper_buf); + if(pt_buf) + HDfree(pt_buf); + +} /* test_h5s_encode_exceed32() */ + +/**************************************************************** +** ** test_h5s_scalar_write(): Test scalar H5S (dataspace) writing code. ** ****************************************************************/ @@ -2384,6 +2480,7 @@ test_h5s(void) test_h5s_null(); /* Test Null dataspace H5S code */ test_h5s_zero_dim(); /* Test dataspace with zero dimension size */ test_h5s_encode(); /* Test encoding and decoding */ + test_h5s_encode_exceed32(); /* Testing encoding when selection exceeds 32 bits limit */ test_h5s_scalar_write(); /* Test scalar H5S writing code */ test_h5s_scalar_read(); /* Test scalar H5S reading code */ |