Update java code with doxygen tags, add menu files. (#1972)

* Update java code with doxygen tags, add menu files.

* Add -Xdoclint:none to autotools javadoc command

* Committing clang-format changes

* Add fortran RM list descriptions

* delete empty file

* doc tag location changes

* Spelling corrections

Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>

86 files changed, 2762 insertions, 1480 deletions

diff --git a/.gitattributes b/.gitattributes
index 013dcf3..5298e08 100644
--- a/.gitattributes
+++ b/.gitattributes
@@ -204,7 +204,6 @@ java/src/hdf/CMakeLists.txt -text
 java/src/hdf/hdf5lib/CMakeLists.txt -text
 java/src/hdf/hdf5lib/H5.java -text
 java/src/hdf/hdf5lib/HDF5Constants.java -text
-java/src/hdf/hdf5lib/HDF5GroupInfo.java -text
 java/src/hdf/hdf5lib/HDFArray.java -text
 java/src/hdf/hdf5lib/HDFNativeData.java -text
 java/src/hdf/hdf5lib/callbacks/Callbacks.java -text
diff --git a/config/cmake/UseJava.cmake b/config/cmake/UseJava.cmake
index 2351ce8..1de08db 100644
--- a/config/cmake/UseJava.cmake
+++ b/config/cmake/UseJava.cmake
@@ -1448,6 +1448,7 @@ function(create_javadoc _target)
 
     add_custom_target(${_target}_javadoc ALL
         COMMAND ${Java_JAVADOC_EXECUTABLE}
+                -Xdoclint:none
                 ${_javadoc_options}
                 ${_javadoc_files}
                 ${_javadoc_packages}
diff --git a/configure.ac b/configure.ac
index d59409b..1aa1c99 100644
--- a/configure.ac
+++ b/configure.ac
@@ -160,8 +160,6 @@ AM_JNIFLAGS="${AM_JNIFLAGS}"
 AM_JAVACFLAGS="${AM_JAVACFLAGS}"
 AM_JAVAFLAGS="${AM_JAVAFLAGS}"
 AM_LDFLAGS="${AM_LDFLAGS}"
-
-## Flags passed in by the user
 CFLAGS="${CFLAGS}"
 CXXFLAGS="${CXXFLAGS}"
 FCFLAGS="${FCFLAGS}"
@@ -1232,7 +1230,7 @@ if test "X$HDF5_DOXYGEN" = "Xyes"; then
   DOXYGEN_HTML_HEADER='$(SRCDIR)/doxygen/hdf5_header.html'
   DOXYGEN_HTML_FOOTER='$(SRCDIR)/doxygen/hdf5_footer.html'
   DOXYGEN_HTML_EXTRA_STYLESHEET='$(SRCDIR)/doxygen/hdf5doxy.css'
-  DOXYGEN_HTML_EXTRA_FILES='$(SRCDIR)/doxygen/hdf5_navtree_hacks.js $(SRCDIR)/doxygen/img/FF-IH_FileGroup.gif $(SRCDIR)/doxygen/img/FF-IH_FileObject.gif $(SRCDIR)/doxygen/img/FileFormatSpecChunkDiagram.jpg $(SRCDIR)/doxygen/img/ftv2node.png $(SRCDIR)/doxygen/img/ftv2pnode.png $(SRCDIR)/doxygen/img/HDFG-logo.png $(SRCDIR)/doxygen/img/IOFlow2.gif $(SRCDIR)/doxygen/img/IOFlow3.gif $(SRCDIR)/doxygen/img/IOFlow.gif $(SRCDIR)/doxygen/img/PaletteExample1.gif $(SRCDIR)/doxygen/img/Palettes.fm.anc.gif'
+  DOXYGEN_HTML_EXTRA_FILES='$(SRCDIR)/doxygen/hdf5_navtree_hacks.js'
   DOXYGEN_TAG_FILE=hdf5.tag
   DOXYGEN_SERVER_BASED_SEARCH=NO
   DOXYGEN_EXTERNAL_SEARCH=NO
diff --git a/doxygen/dox/ReferenceManual.dox b/doxygen/dox/ReferenceManual.dox
index 2e1b8e9..e543331 100644
--- a/doxygen/dox/ReferenceManual.dox
+++ b/doxygen/dox/ReferenceManual.dox
@@ -1,53 +1,34 @@
 /** \page RM HDF5 Reference Manual
 
-The functions provided by the HDF5 C-API are grouped into the following
+The functions provided by the HDF5 API are grouped into the following
 \Emph{modules}:
 
 <table>
 <tr><th>Modules</th></tr>
 <tr valign="top">
 <td>
-
 <table>
 <tr valign="top"><td style="border: none;">
-\li \ref H5A "Attributes (H5A)"
-\li \ref H5D "Datasets (H5D)"
-\li \ref H5S "Dataspaces (H5S)"
-\li \ref H5T "Datatypes (H5T)"
-\li \ref H5E "Error Handling (H5E)"
-\li \ref H5F "Files (H5F)"
-\li \ref H5Z "Filters (H5Z)"
-\li \ref H5G "Groups (H5G)"
-</td><td style="border: none;">
-\li \ref H5I "Identifiers (H5I)"
-\li \ref H5 "Library General (H5)"
-\li \ref H5L "Links (H5L)"
-\li \ref H5O "Objects (H5O)"
-\li \ref H5P "Property Lists (H5P)"
-\li \ref H5PL "Dynamically-loaded Plugins (H5PL)"
-\li \ref H5R "References (H5R)"
-</td><td style="border: none;vertical-align: top;">
-\li \ref high_level
-    <ul>
-    <li>\ref H5LT "Lite (H5LT, H5LD)"
-    <li>\ref H5IM "Images (H5IM)"
-    <li>\ref H5TB "Table (H5TB)"
-    <li>\ref H5PT "Packet Table (H5PT)"
-    <li>\ref H5DS "Dimension Scale (H5DS)"
-    <li>\ref H5DO "Optimizations (H5DO)"
-    <li>\ref H5LR "Extensions (H5LR, H5LT)"
-    </ul>
-</td></tr>
-<tr><td colspan="3" style="border: none;">
-\a Core \a library: \ref H5 \ref H5A \ref H5D \ref H5E \ref H5F \ref H5G \ref H5I \ref H5L
-\ref H5O \ref H5P \ref H5PL \ref H5R \ref H5S \ref H5T \ref H5Z
-</td></tr>
-<tr><td colspan="3" style="border: none;">
-\a High-level \a library: \ref H5LT \ref H5IM \ref H5TB \ref H5PT \ref H5DS \ref H5DO \ref H5LR
-</td></tr>
+\include{doc} core_menu.md
+</td>
+</tr>
+<tr valign="top"><td style="border: none;">
+<!--  High-level library -->
+\include{doc} high_level_menu.md
+</td>
+</tr>
+<tr valign="top"><td style="border: none;">
+<!--  Fortran library -->
+\include{doc} fortran_menu.md
+</td>
+</tr>
+<tr valign="top"><td style="border: none;">
+<!--  Java library -->
+\include{doc} java_menu.md
+</td>
+</tr>
 <tr>
 <td><a href="./deprecated.html">Deprecated functions</a></td>
-<td>Functions with \ref ASYNC</td>
 <td>\ref api-compat-macros</td>
 </tr>
 </table>
diff --git a/doxygen/dox/TechnicalNotes.dox b/doxygen/dox/TechnicalNotes.dox
index 9bd2802..bca81e4 100644
--- a/doxygen/dox/TechnicalNotes.dox
+++ b/doxygen/dox/TechnicalNotes.dox
@@ -1,13 +1,13 @@
 /** \page TN Technical Notes
 
-\li \link api-compat-macros API Compatibility Macros \endlink
-\li \ref APPDBG "Debugging HDF5 Applications"
-\li \ref FMTDISC "File Format Walkthrough"
-\li \ref FILTER "Filters"
-\li \ref IOFLOW "HDF5 Raw I/O Flow Notes"
-\li \ref TNMDC "Metadata Caching in HDF5"
-\li \ref MT "Thread Safe library"
-\li \ref VFL "Virtual File Layer"
+\li \ref api-compat-macros
+\li \ref APPDBG
+\li \ref FMTDISC
+\li \ref FILTER
+\li \ref IOFLOW
+\li \ref TNMDC
+\li \ref MT
+\li \ref VFL
 
  */
 
diff --git a/doxygen/dox/UsersGuide.dox b/doxygen/dox/UsersGuide.dox
index d6d0dcb..1898d3a 100644
--- a/doxygen/dox/UsersGuide.dox
+++ b/doxygen/dox/UsersGuide.dox
@@ -383,49 +383,6 @@ These documents provide additional information for the use and tuning of specifi
 
 Previous Chapter \ref sec_plist
 
-<!-- 
-<table>
-<tr><td style="border: none;">
-\li \ref H5A "Attributes (H5A)"
-\li \ref H5D "Datasets (H5D)"
-\li \ref H5S "Dataspaces (H5S)"
-\li \ref H5T "Datatypes (H5T)"
-\li \ref H5E "Error Handling (H5E)"
-\li \ref H5F "Files (H5F)"
-\li \ref H5Z "Filters (H5Z)"
-\li \ref H5G "Groups (H5G)"
-</td><td style="border: none;">
-\li \ref H5I "Identifiers (H5I)"
-\li \ref H5 "Library General (H5)"
-\li \ref H5L "Links (H5L)"
-\li \ref H5O "Objects (H5O)"
-\li \ref H5P "Property Lists (H5P)"
-\li \ref H5PL "Dynamically-loaded Plugins (H5PL)"
-\li \ref H5R "References (H5R)"
-</td><td style="border: none;vertical-align: top;">
-\li \ref api-compat-macros
-\li <a href="./deprecated.html">Deprecated functions</a>
-\li \ref high_level
-    <ul>
-    <li>\ref H5LT "Lite (H5LT, H5LD)"
-    <li>\ref H5IM "Images (H5IM)"
-    <li>\ref H5TB "Table (H5TB)"
-    <li>\ref H5PT "Packet Table (H5PT)"
-    <li>\ref H5DS "Dimension Scale (H5DS)"
-    <li>\ref H5DO "Optimizations (H5DO)"
-    <li>\ref H5LR "Extensions (H5LR, H5LT)"
-    </ul>
-</td></tr>
-<tr><td colspan="3" style="border: none;">
-\ref H5 \ref H5A \ref H5D \ref H5E \ref H5F \ref H5G \ref H5I \ref H5L
-\ref H5O \ref H5P \ref H5PL \ref H5R \ref H5S \ref H5T \ref H5Z
-</td></tr>
-</table>
-
-</td></tr>
-</table>
- -->
-
 \par Don't like what you see? - You can help to improve this User Guide
      Complete the survey linked near the top of this page!\n
      We treat documentation like code: Fork the
diff --git a/doxygen/dox/high_level/extension.dox b/doxygen/dox/high_level/extension.dox
index c81ac6e..e8471b9 100644
--- a/doxygen/dox/high_level/extension.dox
+++ b/doxygen/dox/high_level/extension.dox
@@ -1,60 +1,48 @@
 /** \defgroup H5LR Extensions
  *
- * <em>Working with region references, hyperslab selections, 
+ * <em>Working with region references, hyperslab selections,
  * and bit-fields (H5LR, H5LT)</em>
  *
- * The following reference manual entries describe high-level HDF5 C and Fortran APIs 
- * for working with region references, hyperslab selections, and bit-fields. 
- * These functions were created as part of a project supporting 
+ * The following reference manual entries describe high-level HDF5 C and Fortran APIs
+ * for working with region references, hyperslab selections, and bit-fields.
+ * These functions were created as part of a project supporting
  * NPP/NPOESS Data Production and Exploitation (
  * <a href="https://support.hdfgroup.org/projects/jpss/documentation">
- * project </a>, 
- * <a href="https://gamma.hdfgroup.org/ftp/pub/outgoing/NPOESS/source">
- * software </a>). 
- * While they were written to facilitate access to NPP, NPOESS, and JPSS 
- * data in the HDF5 format, these functions may be useful to anyone working 
+ * project</a>, software).
+ * While they were written to facilitate access to NPP, NPOESS, and JPSS
+ * data in the HDF5 format, these functions may be useful to anyone working
  * with region references, hyperslab selections, or bit-fields.
  *
- * Note that these functions are not part of the standard HDF5 distribution; 
- * the 
- * <a href="https://gamma.hdfgroup.org/ftp/pub/outgoing/NPOESS/source">
- * software </a> 
- * must be separately downloaded and installed.
+ * Note that these functions are not part of the standard HDF5 distribution;
+ * the software must be separately downloaded and installed.
  *
- * A comprehensive guide to this library, 
- * <a href="https://support.hdfgroup.org/projects/jpss/documentation/HL/UG/NPOESS_HL-UG.pdf"> 
+ * A comprehensive guide to this library,
+ * <a href="https://support.hdfgroup.org/projects/jpss/documentation/HL/UG/NPOESS_HL-UG.pdf">
  * <em>User Guide to the HDF5 High-level Library for Handling Region References and Hyperslab Selections</em></a>
- * is available at 
+ * is available at
  * https://support.hdfgroup.org/projects/jpss/documentation/HL/UG/NPOESS_HL-UG.pdf.
  *
  * - \ref H5LRcopy_reference
- *        \n Copies data from the specified dataset to a new location and 
- *        creates a reference to it.
+ *        \n Copies data from the specified dataset to a new location and creates a reference to it.
  * - \ref H5LRcopy_region
- *        \n  Copies data from a referenced region to a region in a 
- *        destination dataset.
+ *        \n  Copies data from a referenced region to a region in a destination dataset.
  * - \ref H5LRcreate_ref_to_all
- *        \n  Creates a dataset with the region references to the data in all 
- *        datasets located under a specified group in a file or creates a 
- *        dataset with object references to all objects (groups or datasets) 
+ *        \n  Creates a dataset with the region references to the data in all datasets located under a
+ *        specified group in a file or creates a dataset with object references to all objects (groups or datasets) 
  *        located under a specified group in a file.
  * - \ref H5LRcreate_region_references
- *        \n Creates an array of region references using an array of paths to 
+ *        \n Creates an array of region references using an array of paths to
  *        datasets and an array of corresponding hyperslab descriptions.
  * - \ref H5LRget_region_info
  *        \n Retrieves information about the data a region reference points to.
  * - \ref H5LRmake_dataset
- *        \n Creates and writes a dataset containing a list of 
- *        region references.
+ *        \n Creates and writes a dataset containing a list of region references.
  * - \ref H5LRread_region
- *        \n  Retrieves raw data pointed to by a region reference to 
- *        an application buffer.
+ *        \n  Retrieves raw data pointed to by a region reference to an application buffer.
  * - \ref H5LTcopy_region
- *        \n Copies data from a specified region in a source dataset 
- *        to a specified region in a destination dataset.
+ *        \n Copies data from a specified region in a source dataset to a specified region in a destination dataset.
  * - \ref H5LTread_bitfield_value
- *        \n Retrieves the values of quality flags for each element 
- *        to the application provided buffer.
+ *        \n Retrieves the values of quality flags for each element to the application provided buffer.
  * - \ref H5LTread_region
  *        \n Reads selected data to an application buffer.
  *
@@ -77,24 +65,24 @@
  * \param[in] path          Path to the dataset being created
  * \param[in] type_id       Datatype of the dataset
  * \param[in] buf_size      Size of the \p loc_id_ref and \p buf arrays
- * \param[in] loc_id_ref    Array of object identifiers; each identifier 
- *                          describes to which HDF5 file the corresponding 
+ * \param[in] loc_id_ref    Array of object identifiers; each identifier
+ *                          describes to which HDF5 file the corresponding
  *                          region reference belongs to
  * \param[in] buf           Array of region references
  *
  * \return \herr_t
  *
- * \details Given an array of size \p buf_size of region references \p buf, 
- *          the function will create a dataset with path \p path, at location 
- *          specified by \p loc_id and of a datatype specified by \p type_id, 
- *          and will write data associated with each region reference in the order 
- *          corresponding to the order of the region references in the buffer. 
- *          It is assumed that all referenced hyperslabs have the same dimensionality, 
- *          and only the size of the slowest changing dimension may differ. 
- *          Each reference in the \p buf array belongs to the file identified 
+ * \details Given an array of size \p buf_size of region references \p buf,
+ *          the function will create a dataset with path \p path, at location
+ *          specified by \p loc_id and of a datatype specified by \p type_id,
+ *          and will write data associated with each region reference in the order
+ *          corresponding to the order of the region references in the buffer.
+ *          It is assumed that all referenced hyperslabs have the same dimensionality,
+ *          and only the size of the slowest changing dimension may differ.
+ *          Each reference in the \p buf array belongs to the file identified
  *          by the corresponding object identifiers in the array \p loc_id_ref.
  *
- *          If \p path does not exist in \p loc_id then the function will 
+ *          If \p path does not exist in \p loc_id then the function will
  *          create the path specified by \p path automatically.
  *
  * \version 1.1 Fortran wrapper introduced in this release.
@@ -103,10 +91,10 @@
  *
  */
 H5_HLRDLL herr_t H5LRmake_dataset(hid_t loc_id,
-				 const char *path, 
-				 hid_t type_id, const size_t buf_size,
-				 const hid_t *loc_id_ref,
-				 const hdset_reg_ref_t *buf);
+                 const char *path,
+                 hid_t type_id, const size_t buf_size,
+                 const hid_t *loc_id_ref,
+                 const hdset_reg_ref_t *buf);
 
 /*-------------------------------------------------------------------------
  *
@@ -119,49 +107,46 @@ H5_HLRDLL herr_t H5LRmake_dataset(hid_t loc_id,
  * --------------------------------------------------------------------------
  * \ingroup H5LR
  *
- * \brief Creates an array of region references using an array of paths to 
+ * \brief Creates an array of region references using an array of paths to
  *        datasets and an array of corresponding hyperslab descriptions.
  *
  * \param[in] obj_id        File identifier for the HDF5 file containing
  *                          the referenced regions or an object identifier
  *                          for any object in that file
- * \param[in] num_elem      Number of elements in the \p path and 
- *                          \p buf arrays
- * \param[in] path          Array of pointers to strings, which contain 
- *                          the paths to the target datasets for the 
- *                          region references
+ * \param[in] num_elem      Number of elements in the \p path and \p buf arrays
+ * \param[in] path          Array of pointers to strings, which contain
+ *                          the paths to the target datasets for the region references
  * \param[in] block_coord   Array of hyperslab coordinate
- * \param[out] buf          Buffer for returning an array of region 
- *                          references
+ * \param[out] buf          Buffer for returning an array of region references
  *
  * \return \herr_t
  *
  * \note    **Motivation:**
- * \note    H5LRcreate_region_references() is useful when creating 
+ * \note    H5LRcreate_region_references() is useful when creating
  *          large numbers of similar region references.
  *
- * \details H5LRcreate_region_references() creates a list of region references 
- *          given an array of paths to datasets and another array listing the 
+ * \details H5LRcreate_region_references() creates a list of region references
+ *          given an array of paths to datasets and another array listing the
  *          corner coordinates of the corresponding hyperslabs.
  *
  *          \p path parameter is an array of pointers to strings.
  *
- *          \p num_elem specifies the number of region references to be created, 
+ *          \p num_elem specifies the number of region references to be created,
  *          thus specifying the size of the \p path and \p _buf arrays.
  *
- *          Buffer \p block_coord has size 2*rank and is the coordinates of the 
- *          starting point following by the coordinates of the ending point of 
- *          the hyperslab, repeated \p num_elem times for each hyperslab. 
- *          For example, creating two region references to two hyperslabs, 
- *          one with a rectangular hyperslab region starting at element (2,2) 
- *          to element (5,4) and the second rectangular region starting at 
- *          element (7,7) to element (9,10), results in \p block_coord 
+ *          Buffer \p block_coord has size 2*rank and is the coordinates of the
+ *          starting point following by the coordinates of the ending point of
+ *          the hyperslab, repeated \p num_elem times for each hyperslab.
+ *          For example, creating two region references to two hyperslabs,
+ *          one with a rectangular hyperslab region starting at element (2,2)
+ *          to element (5,4) and the second rectangular region starting at
+ *          element (7,7) to element (9,10), results in \p block_coord
  *          being {2,2,5,4, 7,7,9,10}.
  *
- *          The rank of the hyperslab will be the same as the rank of the 
- *          target dataset. H5LRcreate_region_references() will retrieve 
- *          the rank for each dataset and will use those values to interpret 
- *          the values in the buffer. Please note that rank may vary from one 
+ *          The rank of the hyperslab will be the same as the rank of the
+ *          target dataset. H5LRcreate_region_references() will retrieve
+ *          the rank for each dataset and will use those values to interpret
+ *          the values in the buffer. Please note that rank may vary from one
  *          dataset to another.
  *
  * \version 1.1 Fortran wrapper introduced in this release.
@@ -170,43 +155,39 @@ H5_HLRDLL herr_t H5LRmake_dataset(hid_t loc_id,
  *
  */
 H5_HLRDLL herr_t H5LRcreate_region_references(hid_t obj_id,
-					     size_t num_elem,
-					     const char **path,
-					     const hsize_t *block_coord,
-					     hdset_reg_ref_t *buf);
+                      size_t num_elem,
+                      const char **path,
+                      const hsize_t *block_coord,
+                      hdset_reg_ref_t *buf);
 
 /**
  * --------------------------------------------------------------------------
  * \ingroup H5LR
  *
- * \brief Copies data from the specified dataset to a new location and 
- *        creates a reference to it.
+ * \brief Copies data from the specified dataset to a new location and creates a reference to it.
  *
- * \param[in] obj_id        Identifier of any object in a file an 
- *                          HDF5 reference belongs to
+ * \param[in] obj_id        Identifier of any object in a file an HDF5 reference belongs to
  * \param[in] ref           Reference to the datasets region
- * \param[in] file          Name of the destination file 
+ * \param[in] file          Name of the destination file
  * \param[in] path          Full path to the destination dataset
- * \param[in] block_coord   Hyperslab coordinates in the destination 
- *                          dataset
- * \param[out] ref_new      Region reference to the new location of 
- *                          data
+ * \param[in] block_coord   Hyperslab coordinates in the destination dataset
+ * \param[out] ref_new      Region reference to the new location of data
  *
  * \return \herr_t
  *
- * \details Given a data set pointed to by a region reference, the function 
- *          H5LRcopy_reference() will copy the hyperslab data referenced by 
- *          a datasets region reference into existing dataset specified by 
- *          its path \p path in the file with the name \p file, and to location 
- *          specified by the hyperslab coordinates \p block_coord. It will 
- *          create the region reference \p ref_new to point to the new location. 
- *          The number of elements in the old and newly specified regions has 
+ * \details Given a data set pointed to by a region reference, the function
+ *          H5LRcopy_reference() will copy the hyperslab data referenced by
+ *          a datasets region reference into existing dataset specified by
+ *          its path \p path in the file with the name \p file, and to location
+ *          specified by the hyperslab coordinates \p block_coord. It will
+ *          create the region reference \p ref_new to point to the new location.
+ *          The number of elements in the old and newly specified regions has
  *          to be the same.
  *
- *          Buffer \p block_coord has size 2*rank and is the coordinates of 
- *          the starting point following by the coordinates of the ending 
- *          point of the hyperslab. For example, to extract a rectangular 
- *          hyperslab region starting at element (2,2) to element (5,4) 
+ *          Buffer \p block_coord has size 2*rank and is the coordinates of
+ *          the starting point following by the coordinates of the ending
+ *          point of the hyperslab. For example, to extract a rectangular
+ *          hyperslab region starting at element (2,2) to element (5,4)
  *          then \p block_coord would be {2, 2, 5, 4}.
  *
  * \version 1.1 Fortran wrapper introduced in this release.
@@ -215,41 +196,39 @@ H5_HLRDLL herr_t H5LRcreate_region_references(hid_t obj_id,
  *
  */
 H5_HLRDLL herr_t H5LRcopy_reference(hid_t obj_id, hdset_reg_ref_t *ref, const char *file,
-				    const char *path, const hsize_t *block_coord, 
-				    hdset_reg_ref_t *ref_new);
+                     const char *path, const hsize_t *block_coord,
+                     hdset_reg_ref_t *ref_new);
 
 /**
  * --------------------------------------------------------------------------
  * \ingroup H5LR
  *
- * \brief Copies data from a referenced region to a region in a 
- *        destination dataset.
+ * \brief Copies data from a referenced region to a region in a destination dataset.
  *
- * \param[in] obj_id        Identifier of any object in a file 
+ * \param[in] obj_id        Identifier of any object in a file
  *                          dataset region reference belongs to
  * \param[in] ref           Dataset region reference
- * \param[in] file          Name of the destination file 
+ * \param[in] file          Name of the destination file
  * \param[in] path          Full path to the destination dataset
- * \param[in] block_coord   Hyperslab coordinates in the destination 
- *                          dataset
+ * \param[in] block_coord   Hyperslab coordinates in the destination dataset
  *
  * \return \herr_t
  *
- * \details Given a dataset region reference \p ref in a source file 
- *          specified by an identifier of any object in that file 
- *          \p obj_id, the function will write data to the existing 
- *          dataset \p path in file \p file to the simple hyperslab 
+ * \details Given a dataset region reference \p ref in a source file
+ *          specified by an identifier of any object in that file
+ *          \p obj_id, the function will write data to the existing
+ *          dataset \p path in file \p file to the simple hyperslab
  *          specified by \p block_coord.
  *
- *          Buffer \p block_coord has size 2*rank and is the coordinates 
- *          of the starting point following by the coordinates of the 
- *          ending point of the hyperslab. For example, to specify a 
- *          rectangular hyperslab destination region starting at element 
+ *          Buffer \p block_coord has size 2*rank and is the coordinates
+ *          of the starting point following by the coordinates of the
+ *          ending point of the hyperslab. For example, to specify a
+ *          rectangular hyperslab destination region starting at element
  *          (2,2) to element (5,4) then \p block_coord would be {2, 2, 5, 4}.
  *
- *          If \p path does not exist in the destination file (as may be 
- *          the case when writing to a new file) then the dataset will be 
- *          copied directly to the \p path and \p block_coord will be 
+ *          If \p path does not exist in the destination file (as may be
+ *          the case when writing to a new file) then the dataset will be
+ *          copied directly to the \p path and \p block_coord will be
  *          disregarded.
  *
  * \version 1.1 Fortran wrapper introduced in this release.
@@ -258,71 +237,66 @@ H5_HLRDLL herr_t H5LRcopy_reference(hid_t obj_id, hdset_reg_ref_t *ref, const ch
  *
  */
 H5_HLRDLL herr_t H5LRcopy_region(hid_t obj_id,
-				hdset_reg_ref_t *ref,
-				const char *file,
-				const char *path,
-				const hsize_t *block_coord);
+                 hdset_reg_ref_t *ref,
+                 const char *file,
+                 const char *path,
+                 const hsize_t *block_coord);
 
 /**
  * --------------------------------------------------------------------------
  * \ingroup H5LR
  *
- * \brief Creates a dataset with the region references to the data 
- *        in all datasets located under a specified group in a file 
- *        or creates a dataset with object references to all objects 
+ * \brief Creates a dataset with the region references to the data
+ *        in all datasets located under a specified group in a file
+ *        or creates a dataset with object references to all objects
  *        (groups or datasets) located under a specified group in a file.
  *
  * \fg_loc_id
- * \param[in] group_path    Absolute or relative path to the group 
- *                          at which traversal starts
- * \param[in] ds_path       Absolute or relative path to the dataset 
- *                          with region references to be created
- * \param[in] index_type    Index_type; 
- *                          see valid values below in description
- * \param[in] order         Order in which index is traversed; 
- *                          see valid values below in description
- * \param[in] ref_type      Reference type;
- *                          see valid values below in description
+ * \param[in] group_path    Absolute or relative path to the group at which traversal starts
+ * \param[in] ds_path       Absolute or relative path to the dataset with region references to be created
+ * \param[in] index_type    Index_type; see valid values below in description
+ * \param[in] order         Order in which index is traversed; see valid values below in description
+ * \param[in] ref_type      Reference type; see valid values below in description
  *
  * \return \herr_t
  *
- * \details H5LRcreate_ref_to_all() creates a dataset with the 
- *          region references to the data in all datasets located 
- *          under a specified group in a file or creates a dataset with 
- *          object references to all objects (groups or datasets) located 
+ * \details H5LRcreate_ref_to_all() creates a dataset with the
+ *          region references to the data in all datasets located
+ *          under a specified group in a file or creates a dataset with
+ *          object references to all objects (groups or datasets) located
  *          under a specified group in a file.
  *
- *          Given a dataset path \p ds_path in a file specified by the 
- *          \p loc_id identifier, the function H5LRcreate_ref_to_all() 
- *          will create a contiguous one-dimensional dataset with the 
- *          region references or object references depending on the value 
- *          of the \p ref_type parameter. When \p ref_type is 
- *          #H5R_DATASET_REGION, each region reference points to all data 
- *          in a dataset encountered by an internally called H5Lvisit() 
- *          routine, which starts at the group specified by the \p loc_id 
+ *          Given a dataset path \p ds_path in a file specified by the
+ *          \p loc_id identifier, the function H5LRcreate_ref_to_all()
+ *          will create a contiguous one-dimensional dataset with the
+ *          region references or object references depending on the value
+ *          of the \p ref_type parameter. When \p ref_type is
+ *          #H5R_DATASET_REGION, each region reference points to all data
+ *          in a dataset encountered by an internally called H5Lvisit()
+ *          routine, which starts at the group specified by the \p loc_id
  *          and \p group_path parameters. In a like manner, when
- *          \p ref_type is #H5R_OBJECT, each object reference points to 
+ *          \p ref_type is #H5R_OBJECT, each object reference points to
  *          an object (a group or a dataset) encountered by H5Lvisit().
  *
- *          If \p ds_path does not exist in \p loc_id then the function 
+ *          If \p ds_path does not exist in \p loc_id then the function
  *          will create the path specified by \p ds_path automatically.
  *
- *          \p index_type specifies the index to be used. 
+ *          \p index_type specifies the index to be used.
  *          Valid values include the following:
  *          - #H5_INDEX_NAME        Alphanumeric index on name
  *          - #H5_INDEX_CRT_ORDER   Index on creation order
  *
- *          \p order specifies the order in which objects are to be 
- *          inspected along the index specified in \p index_type. 
+ *          \p order specifies the order in which objects are to be
+ *          inspected along the index specified in \p index_type.
  *          Valid values include the following:
  *          - #H5_ITER_INC      Increasing order
  *          - #H5_ITER_DEC      Decreasing order
  *          - #H5_ITER_NATIVE   Fastest available order
  *
- *          For more detailed information on these two parameters, 
- *          see H5Lvisit().
+ *          For more detailed information on these two parameters,
+ *          @see H5Lvisit().
  *
- *          \p ref_type specifies the type of the reference to be used. 
+ *          \p ref_type specifies the type of the reference to be used.
  *          Valid values include the following:
  *          - #H5R_DATASET_REGION   Dataset region reference
  *          - #H5R_OBJECT           Object reference
@@ -333,7 +307,7 @@ H5_HLRDLL herr_t H5LRcopy_region(hid_t obj_id,
  *
  */
 H5_HLRDLL herr_t H5LRcreate_ref_to_all(hid_t loc_id, const char *group_path,
-					 const char *ds_path, H5_index_t index_type, H5_iter_order_t order, H5R_type_t ref_type);
+                  const char *ds_path, H5_index_t index_type, H5_iter_order_t order, H5R_type_t ref_type);
 
 /*-------------------------------------------------------------------------
  *
@@ -352,30 +326,27 @@ H5_HLRDLL herr_t H5LRcreate_ref_to_all(hid_t loc_id, const char *group_path,
  * \param[in] obj_id        File identifier for the HDF5 file containing
  *                          the dataset with the referenced region or an
  *                          object identifier for any object in that file
- * \param[in] ref           Region reference specifying data to be read
- *                          in
- * \param[in] mem_type      Memory datatype of data read from referenced 
+ * \param[in] ref           Region reference specifying data to be read in
+ * \param[in] mem_type      Memory datatype of data read from referenced
  *                          region into the application buffer
- * \param[in,out] numelem   Number of elements to be read into buffer 
- *                          \p buf
- * \param[out] buf          Buffer in which data is returned to the 
- *                          application
+ * \param[in,out] numelem   Number of elements to be read into buffer \p buf
+ * \param[out] buf          Buffer in which data is returned to the application
  *
  * \return \herr_t
  *
- * \details H5LRread_region() reads data pointed to by the region 
+ * \details H5LRread_region() reads data pointed to by the region
  *          reference \p ref into the buffer \p buf.
  *
- *          \p numelem specifies the number of elements to be read 
- *          into \p buf. When the size of the reference region is unknown, 
- *          H5LRread_region() can be called with \p buf set to NULL; 
- *          the number of elements in the referenced region will be returned 
+ *          \p numelem specifies the number of elements to be read
+ *          into \p buf. When the size of the reference region is unknown,
+ *          H5LRread_region() can be called with \p buf set to NULL;
+ *          the number of elements in the referenced region will be returned
  *          in \p numelem.
  *
- *          The buffer buf must be big enough to hold \p numelem elements 
- *          of type \p mem_type. For example, if data is read from the referenced 
- *          region into an integer buffer, \p mem_type should be #H5T_NATIVE_INT 
- *          and the buffer must be at least \c sizeof(int) * \p numelem  bytes 
+ *          The buffer buf must be big enough to hold \p numelem elements
+ *          of type \p mem_type. For example, if data is read from the referenced
+ *          region into an integer buffer, \p mem_type should be #H5T_NATIVE_INT
+ *          and the buffer must be at least \c sizeof(int) * \p numelem  bytes
  *          in size. This buffer must be allocated by the application.
  *
  * \version 1.1 Fortran wrapper introduced in this release.
@@ -384,10 +355,10 @@ H5_HLRDLL herr_t H5LRcreate_ref_to_all(hid_t loc_id, const char *group_path,
  *
  */
 H5_HLRDLL herr_t H5LRread_region(hid_t obj_id,
-				const hdset_reg_ref_t *ref, 
-				hid_t mem_type,
-				size_t *numelem,
-				void *buf );
+                 const hdset_reg_ref_t *ref,
+                 hid_t mem_type,
+                 size_t *numelem,
+                 void *buf );
 
 /*-------------------------------------------------------------------------
  *
@@ -400,40 +371,33 @@ H5_HLRDLL herr_t H5LRread_region(hid_t obj_id,
  * --------------------------------------------------------------------------
  * \ingroup H5LR
  *
- * \brief Retrieves information about the data a region reference 
- *        points to.
+ * \brief Retrieves information about the data a region reference points to.
  *
- * \param[in] obj_id        Identifier of any object in an HDF5 file 
- *                          the region reference belongs to.
+ * \param[in] obj_id        Identifier of any object in an HDF5 file the region reference belongs to.
  * \param[in] ref           Region reference to query
- * \param[in,out] len       Size of the buffer to store \p path in. 
- *                          NOTE: if \p *path is not NULL then \p *len 
- *                          must be the appropriate length
+ * \param[in,out] len       Size of the buffer to store \p path in.
+ *                          NOTE: if \p *path is not NULL then \p *len must be the appropriate length
  * \param[out] path         Full path that a region reference points to
  * \param[out] rank         The number of dimensions of the dataset
- *                          dimensions of the dataset pointed by 
- *                          region reference.
- * \param[out] dtype        Datatype of the dataset pointed by the 
- *                          region reference.
+ *                          dimensions of the dataset pointed by region reference.
+ * \param[out] dtype        Datatype of the dataset pointed by the region reference.
  * \param[out] sel_type     Type of the selection (point or hyperslab)
- * \param[in,out] numelem   Number of coordinate blocks or 
- *                          selected elements.
- * \param[out] buf          Buffer containing description of the region 
- *                          pointed by region reference
+ * \param[in,out] numelem   Number of coordinate blocks or selected elements.
+ * \param[out] buf          Buffer containing description of the region pointed by region reference
  *
  * \return \herr_t
  *
- * \details H5LRget_region_info() queries information about the data 
- *          pointed by a region reference \p ref. It returns one of the 
- *          absolute paths to a dataset, length of the path, dataset’s rank 
- *          and datatype, description of the referenced region and type of 
- *          the referenced region. Any output argument can be NULL if that 
+ * \details H5LRget_region_info() queries information about the data
+ *          pointed by a region reference \p ref. It returns one of the
+ *          absolute paths to a dataset, length of the path, dataset’s rank
+ *          and datatype, description of the referenced region and type of
+ *          the referenced region. Any output argument can be NULL if that
  *          argument does not need to be returned.
  *
- *          The parameter \p obj_id is an identifier for any object in the 
- *          HDF5 file containing the referenced object. For example, it can 
- *          be an identifier of a dataset the region reference belongs to 
- *          or an identifier of an HDF5 file the dataset with region references 
+ *          The parameter \p obj_id is an identifier for any object in the
+ *          HDF5 file containing the referenced object. For example, it can
+ *          be an identifier of a dataset the region reference belongs to
+ *          or an identifier of an HDF5 file the dataset with region references
  *          is stored in.
  *
  *          The parameter \p ref is a region reference to query.
@@ -442,36 +406,36 @@ H5_HLRDLL herr_t H5LRread_region(hid_t obj_id,
  *          buffer of size \p len+1 to return an absolute path to a dataset
  *          the region reference points to.
  *
- *          The parameter \p len is a length of absolute path string plus 
- *          the \0 string terminator. If path parameter is NULL, actual 
- *          length of the path (+1 for \0 string terminator) is returned to 
- *          application and can be used to allocate buffer path of an 
+ *          The parameter \p len is a length of absolute path string plus
+ *          the \0 string terminator. If path parameter is NULL, actual
+ *          length of the path (+1 for \0 string terminator) is returned to
+ *          application and can be used to allocate buffer path of an
  *          appropriate length \p len.
  *
  *          The parameter \p sel_type describes the type of the selected
- *          region. Possible values can be #H5S_SEL_POINTS for point 
+ *          region. Possible values can be #H5S_SEL_POINTS for point
  *          selection and #H5S_SEL_HYPERSLABS for hyperslab selection.
  *
- *          The parameter \p numelem describes how many elements will be 
- *          placed in the buffer \p buf. The number should be interpreted 
+ *          The parameter \p numelem describes how many elements will be
+ *          placed in the buffer \p buf. The number should be interpreted
  *          using the value of \p sel_type.
  *
- *          If value of \p sel_type is #H5S_SEL_HYPERSLABS, the parameter 
- *          \p buf contains \p numelem blocks of the coordinates for each 
- *          simple hyperslab of the referenced region. Each block has 
- *          length \c 2*\p rank and is organized as follows: <"start" coordinate>, 
- *          immediately followed by <"opposite" corner coordinate>. 
- *          The total size of the buffer to hold the description of the 
- *          region will be \c 2*\p rank*\p numelem. If region reference 
- *          points to a contiguous sub-array, then the value of \p numelem 
- *          is 1 and the block contains coordinates of the upper left and 
+ *          If value of \p sel_type is #H5S_SEL_HYPERSLABS, the parameter
+ *          \p buf contains \p numelem blocks of the coordinates for each
+ *          simple hyperslab of the referenced region. Each block has
+ *          length \c 2*\p rank and is organized as follows: <"start" coordinate>,
+ *          immediately followed by <"opposite" corner coordinate>.
+ *          The total size of the buffer to hold the description of the
+ *          region will be \c 2*\p rank*\p numelem. If region reference
+ *          points to a contiguous sub-array, then the value of \p numelem
+ *          is 1 and the block contains coordinates of the upper left and
  *          lower right corners of the sub-array (or simple hyperslab).
  *
- *          If value of \p sel_type is #H5S_SEL_POINTS, the parameter \p buf 
- *          contains \p numelem blocks of the coordinates for each selected 
- *          point of the referenced region. Each block has length \p rank 
- *          and contains coordinates of the element. The total size of the 
- *          buffer to hold the description of the region will be 
+ *          If value of \p sel_type is #H5S_SEL_POINTS, the parameter \p buf
+ *          contains \p numelem blocks of the coordinates for each selected
+ *          point of the referenced region. Each block has length \p rank
+ *          and contains coordinates of the element. The total size of the
+ *          buffer to hold the description of the region will be
  *          \p rank* \p numelem.
  *
  *
@@ -481,14 +445,14 @@ H5_HLRDLL herr_t H5LRread_region(hid_t obj_id,
  *
  */
 H5_HLRDLL herr_t H5LRget_region_info(hid_t obj_id,
-				    const hdset_reg_ref_t *ref,  
-				    size_t *len, 
-				    char *path,
-				    int *rank,
-				    hid_t *dtype,
-				    H5S_sel_type *sel_type,
-				    size_t *numelem,
-				    hsize_t *buf );
+                     const hdset_reg_ref_t *ref,
+                     size_t *len, 
+                     char *path,
+                     int *rank,
+                     hid_t *dtype,
+                     H5S_sel_type *sel_type,
+                     size_t *numelem,
+                     hsize_t *buf );
 
 
 
@@ -503,35 +467,33 @@ H5_HLRDLL herr_t H5LRget_region_info(hid_t obj_id,
  * --------------------------------------------------------------------------
  * \ingroup H5LR
  *
- * \brief Copies data from a specified region in a source dataset 
+ * \brief Copies data from a specified region in a source dataset
  *        to a specified region in a destination dataset
  *
  * \param[in] file_src          Name of the source file
  * \param[in] path_src          Full path to the source dataset
- * \param[in] block_coord_src   Hyperslab coordinates in the 
- *                              source dataset
+ * \param[in] block_coord_src   Hyperslab coordinates in the source dataset
  * \param[in] file_dest         Name of the destination file
  * \param[in] path_dest         Full path to the destination dataset
- * \param[in] block_coord_dset  Hyperslab coordinates in the 
- *                              destination dataset
+ * \param[in] block_coord_dset  Hyperslab coordinates in the destination dataset
  *
  * \return \herr_t
  *
- * \details Given a path to a dataset \p path_src in a file with the 
- *          name \p file_src, and description of a simple hyperslab of 
- *          the source \p block_coord_src, the function will write data 
- *          to the dataset \p path_dest in file \p file_dest to the 
- *          simple hyperslab specified by \p block_coord_dset. 
- *          The arrays \p block_coord_src and \p block_coord_dset have 
- *          a length of 2*rank and are the coordinates of the starting 
- *          point following by the coordinates of the ending point of the 
- *          hyperslab. For example, to specify a rectangular hyperslab 
- *          destination region starting at element (2,2) to element (5,4) 
+ * \details Given a path to a dataset \p path_src in a file with the
+ *          name \p file_src, and description of a simple hyperslab of
+ *          the source \p block_coord_src, the function will write data
+ *          to the dataset \p path_dest in file \p file_dest to the
+ *          simple hyperslab specified by \p block_coord_dset.
+ *          The arrays \p block_coord_src and \p block_coord_dset have
+ *          a length of 2*rank and are the coordinates of the starting
+ *          point following by the coordinates of the ending point of the
+ *          hyperslab. For example, to specify a rectangular hyperslab
+ *          destination region starting at element (2,2) to element (5,4)
  *          then \p block_coord_dset would be {2, 2, 5, 4}.
  *
- *          If \p path_dest does not exist in the destination file 
- *          (as may be the case when writing to a new file) then the 
- *          dataset will be copied directly to the \p path_dest and 
+ *          If \p path_dest does not exist in the destination file
+ *          (as may be the case when writing to a new file) then the
+ *          dataset will be copied directly to the \p path_dest and
  *          \p block_coord_dset will be disregarded.
  *
  * \version 1.1 Fortran wrapper introduced in this release.
@@ -540,11 +502,11 @@ H5_HLRDLL herr_t H5LRget_region_info(hid_t obj_id,
  *
  */
 H5_HLRDLL herr_t H5LTcopy_region(const char *file_src,
-				const char *path_src,
-				const hsize_t *block_coord_src,
-				const char *file_dest,
-				const char *path_dest,
-				const hsize_t *block_coord_dset);
+                 const char *path_src,
+                 const hsize_t *block_coord_src,
+                 const char *file_dest,
+                 const char *path_dest,
+                 const hsize_t *block_coord_dset);
 
 /*-------------------------------------------------------------------------
  *
@@ -562,27 +524,25 @@ H5_HLRDLL herr_t H5LTcopy_region(const char *file_src,
  * \param[in] file          Name of file
  * \param[in] path          Full path to a dataset
  * \param[in] block_coord   Hyperslab coordinates
- * \param[in] mem_type      Memory datatype, describing the buffer 
- *                          the referenced data will be read into
- * \param[out] buf          Buffer containing data from the 
- *                          referenced region
+ * \param[in] mem_type      Memory datatype, describing the buffer the referenced data will be read into
+ * \param[out] buf          Buffer containing data from the referenced region
  *
  * \return \herr_t
  *
- * \details H5LTread_region() reads data from a region described by 
- *          the hyperslab coordinates in \p block_coord, located in 
- *          the dataset specified by its absolute path \p path in a 
- *          file specified by its name \p file. Data is read into a 
- *          buffer \p buf of the datatype that corresponds to the 
+ * \details H5LTread_region() reads data from a region described by
+ *          the hyperslab coordinates in \p block_coord, located in
+ *          the dataset specified by its absolute path \p path in a
+ *          file specified by its name \p file. Data is read into a
+ *          buffer \p buf of the datatype that corresponds to the
  *          HDF5 datatype specified by \p mem_type.
  *
- *          Buffer \p block_coord has size 2*rank and is the coordinates 
- *          of the starting point following by the coordinates of the 
- *          ending point of the hyperslab. For example, to extract a 
- *          rectangular hyperslab region starting at element (2,2) to 
+ *          Buffer \p block_coord has size 2*rank and is the coordinates
+ *          of the starting point following by the coordinates of the
+ *          ending point of the hyperslab. For example, to extract a
+ *          rectangular hyperslab region starting at element (2,2) to
  *          element (5,4) then \p block_coord would be {2, 2, 5, 4}.
  *
- *          Buffer \p buf should be big enough to hold selected elements 
+ *          Buffer \p buf should be big enough to hold selected elements
  *          of the type that corresponds to the \p mem_type
  *
  * \version 1.1 Fortran wrapper introduced in this release.
@@ -591,57 +551,55 @@ H5_HLRDLL herr_t H5LTcopy_region(const char *file_src,
  *
  */
 H5_HLRDLL herr_t  H5LTread_region(const char *file,
-				 const char *path,
-				 const hsize_t *block_coord,
-				 hid_t mem_type,
-				 void *buf );
+                  const char *path,
+                  const hsize_t *block_coord,
+                  hid_t mem_type,
+                  void *buf );
 
 /**
  * --------------------------------------------------------------------------
  * \ingroup H5LR
  *
- * \brief Retrieves the values of quality flags for each element 
+ * \brief Retrieves the values of quality flags for each element
  *        to the application provided buffer.
  *
  * \param[in] dset_id   Identifier of the dataset with bit-field values
  * \param[in] num_values    Number of the values to be extracted
- * \param[in] offset        Array of staring bits to be extracted from 
+ * \param[in] offset        Array of staring bits to be extracted from
  *                          the element; valid values: 0 (zero) through 7
- * \param[in] lengths       Array of the number of bits to be extracted 
- *                          for each value
- * \param[in] space         Dataspace identifier, describing the elements 
- *                          to be read from the dataset with bit-field 
- *                          values
+ * \param[in] lengths       Array of the number of bits to be extracted for each value
+ * \param[in] space         Dataspace identifier, describing the elements
+ *                          to be read from the dataset with bit-field values
  * \param[out] buf          Buffer to read the values in
  *
  * \return \herr_t
  *
- * \details H5LTread_bitfield_value() reads selected elements from a 
- *          dataset specified by its identifier \p dset_id, and unpacks 
+ * \details H5LTread_bitfield_value() reads selected elements from a
+ *          dataset specified by its identifier \p dset_id, and unpacks
  *          the bit-field values to a buffer \p buf.
  *
- *          The parameter \p space is a space identifier that indicates 
+ *          The parameter \p space is a space identifier that indicates
  *          which elements of the dataset should be read.
  *
- *          The parameter \p offset is an array of length \p num_values; 
+ *          The parameter \p offset is an array of length \p num_values;
  *          the i<sup>th</sup> element of the array holds the value of the
- *          starting bit of the i<sup>th</sup> bit-field value. 
+ *          starting bit of the i<sup>th</sup> bit-field value.
  *          Valid values are: 0 (zero) through 7.
  *
- *          The parameter \p lengths is an array of length \p num_values; 
- *          the i<sup>th</sup> element of the array holds the number of 
- *          bits to be extracted for the i<sup>th</sup> bit-field value. 
- *          Extracted bits will be interpreted as a base-2 integer value. 
- *          Each value will be converted to the base-10 integer value and 
- *          stored in the application buffer. 
- *
- *          Buffer \p buf is allocated by the application and should be big 
- *          enough to hold \c num_sel_elem * \p num_values elements of the 
- *          specified type, where \c num_sel_elem is a number of the elements 
- *          to be read from the dataset. Data in the buffer is organized 
- *          as \p num_values values for the first element, followed by the 
- *          \p num_values values for the second element, ... , followed by 
- *          the \p num_values values for the 
+ *          The parameter \p lengths is an array of length \p num_values;
+ *          the i<sup>th</sup> element of the array holds the number of
+ *          bits to be extracted for the i<sup>th</sup> bit-field value.
+ *          Extracted bits will be interpreted as a base-2 integer value.
+ *          Each value will be converted to the base-10 integer value and
+ *          stored in the application buffer.
+ *
+ *          Buffer \p buf is allocated by the application and should be big
+ *          enough to hold \c num_sel_elem * \p num_values elements of the
+ *          specified type, where \c num_sel_elem is a number of the elements
+ *          to be read from the dataset. Data in the buffer is organized
+ *          as \p num_values values for the first element, followed by the
+ *          \p num_values values for the second element, ... , followed by
+ *          the \p num_values values for the
  *          \c num_selected_elem<sup>th</sup> element.
  *
  * \version 1.1 Fortran wrapper introduced in this release.
@@ -650,5 +608,5 @@ H5_HLRDLL herr_t  H5LTread_region(const char *file,
  *
  */
 H5_HLRDLL herr_t H5LTread_bitfield_value(hid_t dset_id, int num_values, const unsigned *offset,
-					const unsigned *lengths, hid_t space, int *buf);
+                 const unsigned *lengths, hid_t space, int *buf);
 
diff --git a/doxygen/dox/high_level/high_level.dox b/doxygen/dox/high_level/high_level.dox
deleted file mode 100644
index c53d298..0000000
--- a/doxygen/dox/high_level/high_level.dox
+++ /dev/null
@@ -1,29 +0,0 @@
-/** \page high_level High-level library
- * The high-level HDF5 library includes several sets of convenience and standard-use APIs to 
- * facilitate common HDF5 operations.
- *
- * <ul>
- * <li>\ref H5LT "Lite (H5LT, H5LD)"
- * \n
- * Functions to simplify creating and manipulating datasets, attributes and other features
- * <li>\ref H5IM "Image (H5IM)"
- * \n
- * Creating and manipulating HDF5 datasets intended to be interpreted as images
- * <li>\ref H5TB "Table (H5TB)"
- * \n
- * Creating and manipulating HDF5 datasets intended to be interpreted as tables
- * <li>\ref H5PT "Packet Table (H5PT)"
- * \n
- * Creating and manipulating HDF5 datasets to support append- and read-only operations on table data
- * <li>\ref H5DS "Dimension Scale (H5DS)"
- * \n
- * Creating and manipulating HDF5 datasets that are associated with the dimension of another HDF5 dataset
- * <li>\ref H5DO "Optimizations (H5DO)"
- * \n
- * Bypassing default HDF5 behavior in order to optimize for specific use cases
- * <li>\ref H5LR "Extensions (H5LR, H5LT)"
- * \n
- * Working with region references, hyperslab selections, and bit-fields
- * </ul>
- * 
- */
diff --git a/doxygen/examples/ThreadSafeLibrary.html b/doxygen/examples/ThreadSafeLibrary.html
index ebb193e..68b46f5 100644
--- a/doxygen/examples/ThreadSafeLibrary.html
+++ b/doxygen/examples/ThreadSafeLibrary.html
@@ -20,9 +20,9 @@ The following code is placed at the beginning of H5private.h:
 </blockquote>
 
 <p>
-<code>H5_HAVE_THREADSAFE</code> is defined when the HDF-5 library is
+<code>H5_HAVE_THREADSAFE</code> is defined when the HDF5 library is
 compiled with the --enable-threadsafe configuration option. In general,
-code for the non-threadsafe version of HDF-5 library are placed within
+code for the non-threadsafe version of HDF5 library are placed within
 the <code>#else</code> part of the conditional compilation. The exception
 to this rule are the changes to the <code>FUNC_ENTER</code> (in
 H5private.h), <code>HRETURN</code> and <code>HRETURN_ERROR</code> (in
@@ -438,7 +438,7 @@ described in Appendix D and may be found in <code>H5TS.c</code>.
 
 <p>
 Except where stated, all tests involve 16 simultaneous threads that make
-use of HDF-5 API calls without any explicit synchronization typically
+use of HDF5 API calls without any explicit synchronization typically
 required in a non-threadsafe environment.
 </p>
 
@@ -453,7 +453,7 @@ dataset's named value.
 
 <p>
 The main thread would join with all 16 threads and attempt to match the
-resulting HDF-5 file with expected results - that each dataset contains
+resulting HDF5 file with expected results - that each dataset contains
 the correct value (0 for <i>zero</i>, 1 for <i>one</i> etc ...) and all
 datasets were correctly created.
 </p>
@@ -473,7 +473,7 @@ name.
 
 <p>
 The error stack implementation runs correctly if it reports 15 instances
-of the dataset name conflict error and finally generates a correct HDF-5
+of the dataset name conflict error and finally generates a correct HDF5
 containing that single dataset. Each thread should report its own stack
 of errors with a thread number associated with it.
 </p>
diff --git a/doxygen/examples/core_menu.md b/doxygen/examples/core_menu.md
new file mode 100644
index 0000000..1379f18
--- /dev/null
+++ b/doxygen/examples/core_menu.md
@@ -0,0 +1,61 @@
+<b>Core Library</b>
+
+- @ref H5A "Attributes (H5A)"
+<br />
+HDF5 attribute is a small metadata object describing the nature and/or intended usage of a primary data object.
+
+- @ref H5D "Datasets (H5D)"
+<br />
+Manage HDF5 datasets, including the transfer of data between memory and disk and the description of dataset properties.
+
+- @ref H5S "Dataspaces (H5S)"
+<br />
+HDF5 dataspaces describe the shape of datasets in memory or in HDF5 files.
+
+- @ref H5T "Datatypes (H5T)"
+<br />
+HDF5 datatypes describe the element type of HDF5 datasets and attributes.
+
+- @ref H5E "Error Handling (H5E)"
+<br />
+HDF5 library error reporting.
+
+- @ref H5F "Files (H5F)"
+<br />
+Manage HDF5 files.
+
+- @ref H5Z "Filters (H5Z)"
+<br />
+Manage HDF5 user-defined filters
+
+- @ref H5G "Groups (H5G)"
+<br />
+Manage HDF5 groups.
+
+- @ref H5I "Identifiers (H5I)"
+<br />
+Manage identifiers defined by the HDF5 library.
+
+- @ref H5 "Library General (H5)"
+<br />
+Manage the life cycle of HDF5 library instances.
+
+- @ref H5L "Links (H5L)"
+<br />
+Manage HDF5 links and link types.
+
+- @ref H5O "Objects (H5O)"
+<br />
+Manage HDF5 objects (groups, datasets, datatype objects).
+
+- @ref H5P "Property Lists (H5P)"
+<br />
+HDF5 property lists are the main vehicle to configure the behavior of HDF5 API functions.
+
+- @ref H5PL "Dynamically-loaded Plugins (H5PL)"
+<br />
+Manage the loading behavior of HDF5 plugins.
+
+- @ref H5R "References (H5R)"
+<br />
+Manage HDF5 references (HDF5 objects, attributes, and selections on datasets a.k.a. dataset regions).
diff --git a/doxygen/examples/fortran_menu.md b/doxygen/examples/fortran_menu.md
new file mode 100644
index 0000000..335a21a
--- /dev/null
+++ b/doxygen/examples/fortran_menu.md
@@ -0,0 +1,61 @@
+<b>Fortran Library</b>
+
+-  H5A "Attributes (H5A)"
+<br />
+HDF5 attribute is a small metadata object describing the nature and/or intended usage of a primary data object.
+
+-  H5D "Datasets (H5D)"
+<br />
+Manage HDF5 datasets, including the transfer of data between memory and disk and the description of dataset properties.
+
+-  H5S "Dataspaces (H5S)"
+<br />
+HDF5 dataspaces describe the shape of datasets in memory or in HDF5 files.
+
+-  H5T "Datatypes (H5T)"
+<br />
+HDF5 datatypes describe the element type of HDF5 datasets and attributes.
+
+-  H5E "Error Handling (H5E)"
+<br />
+HDF5 library error reporting.
+
+-  H5F "Files (H5F)"
+<br />
+Manage HDF5 files.
+
+-  H5Z "Filters (H5Z)"
+<br />
+Manage HDF5 user-defined filters
+
+-  H5G "Groups (H5G)"
+<br />
+Manage HDF5 groups.
+
+-  H5I "Identifiers (H5I)"
+<br />
+Manage identifiers defined by the HDF5 library.
+
+-  H5 "Library General (H5)"
+<br />
+Manage the life cycle of HDF5 library instances.
+
+-  H5L "Links (H5L)"
+<br />
+Manage HDF5 links and link types.
+
+-  H5O "Objects (H5O)"
+<br />
+Manage HDF5 objects (groups, datasets, datatype objects).
+
+-  H5P "Property Lists (H5P)"
+<br />
+HDF5 property lists are the main vehicle to configure the behavior of HDF5 API functions.
+
+-  H5PL "Dynamically-loaded Plugins (H5PL)"
+<br />
+Manage the loading behavior of HDF5 plugins.
+
+-  H5R "References (H5R)"
+<br />
+Manage HDF5 references (HDF5 objects, attributes, and selections on datasets a.k.a. dataset regions).
diff --git a/doxygen/examples/high_level_menu.md b/doxygen/examples/high_level_menu.md
new file mode 100644
index 0000000..9e6f696
--- /dev/null
+++ b/doxygen/examples/high_level_menu.md
@@ -0,0 +1,30 @@
+<b>High-level library</b>
+<br />
+The high-level HDF5 library includes several sets of convenience and standard-use APIs to 
+facilitate common HDF5 operations.
+
+- @ref H5LT "Lite (H5LT, H5LD)"
+<br />
+Functions to simplify creating and manipulating datasets, attributes and other features
+
+- @ref H5IM "Image (H5IM)"
+<br />
+Creating and manipulating HDF5 datasets intended to be interpreted as images
+
+- @ref H5TB "Table (H5TB)"
+<br />
+Creating and manipulating HDF5 datasets intended to be interpreted as tables
+
+- @ref H5PT "Packet Table (H5PT)"
+<br />
+Creating and manipulating HDF5 datasets to support append- and read-only operations on table data
+
+- @ref H5DS "Dimension Scale (H5DS)"
+<br />
+Creating and manipulating HDF5 datasets that are associated with the dimension of another HDF5 dataset
+
+- @ref H5DO "Optimizations (H5DO)"
+<br />
+Bypassing default HDF5 behavior in order to optimize for specific use cases
+
+- @ref H5LR "Extensions (H5LR, H5LT)"
diff --git a/doxygen/examples/java_menu.md b/doxygen/examples/java_menu.md
new file mode 100644
index 0000000..bec7d4e
--- /dev/null
+++ b/doxygen/examples/java_menu.md
@@ -0,0 +1,80 @@
+<b>Java Library</b>
+ @ref HDF5LIB
+ 
+- @ref JH5
+<br />
+This package is the Java interface for the HDF5 library.
+ 
+- @ref JH5A
+<br />
+This package is the Java interface for the HDF5 library attribute APIs.
+ 
+- @ref JH5D
+<br />
+This package is the Java interface for the HDF5 library dataset APIs.
+ 
+- @ref JH5S
+<br />
+This package is the Java interface for the HDF5 library dataspace APIs.
+ 
+- @ref JH5T
+<br />
+This package is the Java interface for the HDF5 library datatype APIs.
+ 
+- @ref JH5E
+<br />
+This package is the Java interface for the HDF5 library error APIs.
+ 
+- @ref JH5F
+<br />
+This package is the Java interface for the HDF5 library file APIs.
+ 
+- @ref JH5Z
+<br />
+This package is the Java interface for the HDF5 library filter APIs.
+ 
+- @ref JH5G
+<br />
+This package is the Java interface for the HDF5 library group APIs.
+ 
+- @ref JH5I
+<br />
+This package is the Java interface for the HDF5 library identifier APIs.
+ 
+- @ref JH5L
+<br />
+This package is the Java interface for the HDF5 library links APIs.
+ 
+- @ref JH5O
+<br />
+This package is the Java interface for the HDF5 library object APIs.
+ 
+- @ref JH5P
+<br />
+This package is the Java interface for the HDF5 library property list APIs.
+ 
+- @ref JH5PL
+<br />
+This package is the Java interface for the HDF5 library plugin APIs.
+ 
+- @ref JH5R
+<br />
+This package is the Java interface for the HDF5 library reference APIs.
+
+- @ref HDF5CONST
+<br />
+This class contains C constants and enumerated types of HDF5 library.
+
+- @ref HDFNATIVE
+<br />
+This class encapsulates native methods to deal with arrays of numbers,
+ * converting from numbers to bytes and bytes to numbers.
+
+- @ref HDFARRAY
+<br />
+This is a class for handling multidimensional arrays for HDF.
+
+- @ref ERRORS
+<br />
+The class HDF5Exception returns errors from the Java HDF5 Interface.
+ 
\ No newline at end of file
diff --git a/doxygen/hdf5doxy.css b/doxygen/hdf5doxy.css
index 8c03860..639843d 100644
--- a/doxygen/hdf5doxy.css
+++ b/doxygen/hdf5doxy.css
@@ -244,8 +244,16 @@ a {
   padding: 2px 1px 0;
 }
 
-a[href*="http"] {
-  background: url('https://mdn.mozillademos.org/files/12982/external-link-52.png') no-repeat 100% 0;
-  background-size: 12px 12px;
-  padding-right: 16px;
+a[href^="http"]::after,
+a[href^="https://"]::after
+{
+  content: "";
+  width: 11px;
+  height: 11px;
+  margin-left: 4px;
+  background-image: url("data:image/svg+xml,%3Csvg xmlns='http://www.w3.org/2000/svg' width='16' height='16' fill='currentColor' viewBox='0 0 16 16'%3E%3Cpath fill-rule='evenodd' d='M8.636 3.5a.5.5 0 0 0-.5-.5H1.5A1.5 1.5 0 0 0 0 4.5v10A1.5 1.5 0 0 0 1.5 16h10a1.5 1.5 0 0 0 1.5-1.5V7.864a.5.5 0 0 0-1 0V14.5a.5.5 0 0 1-.5.5h-10a.5.5 0 0 1-.5-.5v-10a.5.5 0 0 1 .5-.5h6.636a.5.5 0 0 0 .5-.5z'/%3E%3Cpath fill-rule='evenodd' d='M16 .5a.5.5 0 0 0-.5-.5h-5a.5.5 0 0 0 0 1h3.793L6.146 9.146a.5.5 0 1 0 .708.708L15 1.707V5.5a.5.5 0 0 0 1 0v-5z'/%3E%3C/svg%3E");
+  background-position: center;
+  background-repeat: no-repeat;
+  background-size: contain;
+  display: inline-block;
 }
diff --git a/java/src/Makefile.am b/java/src/Makefile.am
index e6518de..8820fd8 100644
--- a/java/src/Makefile.am
+++ b/java/src/Makefile.am
@@ -106,7 +106,6 @@ hdf5_java_JAVA =  \
 	${pkgpath}/structs/H5AC_cache_config_t.java \
 	${pkgpath}/H5.java  \
 	${pkgpath}/HDF5Constants.java  \
-	${pkgpath}/HDF5GroupInfo.java  \
 	${pkgpath}/HDFArray.java  \
 	${pkgpath}/HDFNativeData.java
 
@@ -122,7 +121,7 @@ DOCTITLE = '<h1>HDF5 Java Wrapper</h1>'
 SRCDIR = '$(pkgpath)'
 
 docs:
-	$(JAVADOC) -sourcepath $(srcdir) -d javadoc -use -splitIndex -windowtitle $(WINDOWTITLE) -doctitle $(DOCTITLE) -J-Xmx180m -verbose -overview $(top_srcdir)/java/src/hdf/overview.html -classpath $(CLASSPATH_ENV) hdf.hdf5lib
+	$(JAVADOC) -sourcepath $(srcdir) -d javadoc -Xdoclint:none -use -splitIndex -windowtitle $(WINDOWTITLE) -doctitle $(DOCTITLE) -J-Xmx180m -verbose -overview $(top_srcdir)/java/src/hdf/overview.html -classpath $(CLASSPATH_ENV) hdf.hdf5lib
 
 CLEANFILES = classhdf5_java.stamp $(jarfile) $(JAVAROOT)/$(pkgpath)/callbacks/*.class $(JAVAROOT)/$(pkgpath)/exceptions/*.class $(JAVAROOT)/$(pkgpath)/structs/*.class $(JAVAROOT)/$(pkgpath)/*.class
 
diff --git a/java/src/hdf/hdf5lib/CMakeLists.txt b/java/src/hdf/hdf5lib/CMakeLists.txt
index 089af1b..723ee3a 100644
--- a/java/src/hdf/hdf5lib/CMakeLists.txt
+++ b/java/src/hdf/hdf5lib/CMakeLists.txt
@@ -99,7 +99,6 @@ set (HDF5_JAVADOC_HDF_HDF5_STRUCTS_SOURCES
 set (HDF5_JAVA_HDF_HDF5_SOURCES
     HDFArray.java
     HDF5Constants.java
-    HDF5GroupInfo.java
     HDFNativeData.java
     H5.java
 )
diff --git a/java/src/hdf/hdf5lib/H5.java b/java/src/hdf/hdf5lib/H5.java
index c6ccd7e..60d220a 100644
--- a/java/src/hdf/hdf5lib/H5.java
+++ b/java/src/hdf/hdf5lib/H5.java
@@ -57,55 +57,55 @@ import hdf.hdf5lib.structs.H5L_info_t;
 import hdf.hdf5lib.structs.H5O_info_t;
 
 /**
+ * @page HDF5LIB HDF5 Java API Package
  * This class is the Java interface for the HDF5 library.
  * <p>
  * This code is the called by Java programs to access the entry points of the HDF5 library. Each routine wraps
  * a single HDF5 entry point, generally with the arguments and return codes analogous to the C interface.
  * <p>
- * For details of the HDF5 library, see the HDF5 Documentation at:
- * <a href="http://hdfgroup.org/HDF5/">http://hdfgroup.org/HDF5/</a>
+ * For details of the HDF5 library, @see @ref RM
  * <hr>
  * <p>
  * <b>Mapping of arguments for Java</b>
  *
  * <p>
  * In general, arguments to the HDF Java API are straightforward translations from the 'C' API described in
- * the HDF Reference Manual.
+ * the @ref RM.
  *
  * <table border=1>
- * <caption><b>HDF-5 C types to Java types</b> </caption>
+ * <caption><b>HDF5 C types to Java types</b> </caption>
  * <tr>
- * <td><b>HDF-5</b></td>
+ * <td><b>HDF5</b></td>
  * <td><b>Java</b></td>
  * </tr>
  * <tr>
- * <td>H5T_NATIVE_INT</td>
+ * <td>@ref H5T_NATIVE_INT</td>
  * <td>int, Integer</td>
  * </tr>
  * <tr>
- * <td>H5T_NATIVE_SHORT</td>
+ * <td>@ref H5T_NATIVE_SHORT</td>
  * <td>short, Short</td>
  * </tr>
  * <tr>
- * <td>H5T_NATIVE_FLOAT</td>
+ * <td>@ref H5T_NATIVE_FLOAT</td>
  * <td>float, Float</td>
  * </tr>
  * <tr>
- * <td>H5T_NATIVE_DOUBLE</td>
+ * <td>@ref H5T_NATIVE_DOUBLE</td>
  * <td>double, Double</td>
  * </tr>
  * <tr>
- * <td>H5T_NATIVE_CHAR</td>
+ * <td>@ref H5T_NATIVE_CHAR</td>
  * <td>byte, Byte</td>
  * </tr>
  * <tr>
- * <td>H5T_C_S1</td>
+ * <td>@ref H5T_C_S1</td>
  * <td>java.lang.String</td>
  * </tr>
  * <tr>
- * <td>void * <BR>
+ * <td>void * <br />
  * (i.e., pointer to `Any')</td>
- * <td>Special -- see HDFArray</td>
+ * <td>Special -- see @ref HDFARRAY</td>
  * </tr>
  * </table>
  * <b>General Rules for Passing Arguments and Results</b>
@@ -114,17 +114,17 @@ import hdf.hdf5lib.structs.H5O_info_t;
  * for arrays, which are discussed below.
  * <p>
  * The <i>return value</i> of Java methods is also the analogous type, as above. A major exception to that
- * rule is that all HDF functions that return SUCCEED/FAIL are declared <i>boolean</i> in the Java version,
- * rather than <i>int</i> as in the C. Functions that return a value or else FAIL are declared the
+ * rule is that all HDF Java functions will raise an exception upon failure in the Java version,
+ * rather than just return <i>int</i> as in the C. Functions that return a value are declared
  * equivalent to the C function.
  * However, in most cases the Java method will raise an exception instead of returning an error code.
- * See <a href="#ERRORS">Errors and Exceptions</a> below.
+ * @see @ref ERRORS.
  * <p>
  * Java does not support pass by reference of arguments, so arguments that are returned through <b>OUT</b>
  * parameters must be wrapped in an object or array. The Java API for HDF consistently wraps arguments in
- * arrays.
+ * arrays. Where possible the Java function may return the OUT parameter as an object or basic type.
  * <p>
- * For instance, a function that returns two integers is declared:
+ * For instance, a function that returns two integers declared as:
  *
  * <pre>
  *       h_err_t HDF5dummy( int *a1, int *a2)
@@ -135,26 +135,34 @@ import hdf.hdf5lib.structs.H5O_info_t;
  * <pre>
  * public synchronized static native int HDF5dummy(int args[]);
  * </pre>
+ * OR
+ * <pre>
+ * public synchronized static native int[] HDF5dummy();
+ * </pre>
  *
  * where <i>a1</i> is <i>args[0]</i> and <i>a2</i> is <i>args[1]</i>, and would be invoked:
  *
  * <pre>
  * H5.HDF5dummy(a);
  * </pre>
+ * OR
+ * <pre>
+ * a = H5.HDF5dummy();
+ * </pre>
  *
  * <p>
  * All the routines where this convention is used will have specific documentation of the details, given
  * below.
  * <p>
- * <b>Arrays</b>
+ * <b>@ref HDFARRAY</b>
  * <p>
  * HDF5 needs to read and write multi-dimensional arrays of any number type (and records). The HDF5 API
  * describes the layout of the source and destination, and the data for the array passed as a block of
  * bytes, for instance,
  *
- * <pre>
- *      herr_t H5Dread(long fid, long filetype, long memtype, long memspace, void * data);
- * </pre>
+ * @code
+ *      herr_t H5Dread(long fid, long filetype, long memtype, long memspace, void *data);
+ * @endcode
  *
  * <p>
  * where ``void *'' means that the data may be any valid numeric type, and is a contiguous block of bytes that
@@ -164,7 +172,7 @@ import hdf.hdf5lib.structs.H5O_info_t;
  * For Java, this ``ANY'' is a problem, as the type of data must always be declared. Furthermore,
  * multidimensional arrays are definitely <i>not</i> laid out contiguously in memory. It would be infeasible
  * to declare a separate routine for every combination of number type and dimensionality. For that reason, the
- * <a href="./hdf.hdf5lib.HDFArray.html"><b>HDFArray</b></a> class is used to discover the type, shape, and
+ * @ref HDFARRAY <b>HDFArray</b> class is used to discover the type, shape, and
  * size of the data array at run time, and to convert to and from a contiguous array of bytes in synchronized
  * static native C order.
  * <p>
@@ -172,88 +180,103 @@ import hdf.hdf5lib.structs.H5O_info_t;
  * passed as an ``Object'', and the Java API will translate to and from the appropriate packed array of bytes
  * needed by the C library. So the function above would be declared:
  *
- * <pre>
- * public synchronized static native int H5Dread(long fid, long filetype, long memtype, long memspace,
- * Object data);
- * </pre>
- *            OPEN_IDS.addElement(id);
-
+ * @code
+ *     public synchronized static int H5Dread(long dataset_id, long mem_type_id, long mem_space_id,
+ *                                            long file_space_id, long xfer_plist_id, Object obj,
+ *                                            boolean isCriticalPinning)
+ *       throws HDF5Exception, HDF5LibraryException, NullPointerException;
+ * @endcode
+ *
  * and the parameter <i>data</i> can be any multi-dimensional array of numbers, such as float[][], or
  * int[][][], or Double[][].
  * <p>
- * <b>HDF-5 Constants</b>
+ * <b>@ref HDF5CONST</b>
  * <p>
- * The HDF-5 API defines a set of constants and enumerated values. Most of these values are available to Java
- * programs via the class <a href="./hdf.hdf5lib.HDF5Constants.html"> <b>HDF5Constants</b></a>. For example,
+ * The HDF5 API defines a set of constants and enumerated values. Most of these values are available to Java
+ * programs via the class @ref HDF5CONST <b>HDF5Constants</b></a>. For example,
  * the parameters for the h5open() call include two numeric values, <b><i>HDFConstants.H5F_ACC_RDWR</i></b>
  * and <b><i>HDF5Constants.H5P_DEFAULT</i></b>.
  * As would be expected, these numbers correspond to the C constants
- * <b><i>H5F_ACC_RDWR</i></b> and <b><i>H5P_DEFAULT</i></b>.
+ * <b><i>#H5F_ACC_RDWR</i></b> and <b><i>#H5P_DEFAULT</i></b>.
  * <p>
- * The HDF-5 API defines a set of values that describe number types and sizes, such as "H5T_NATIVE_INT" and
- * "hsize_t". These values are determined at run time by the HDF-5 C library. To support these parameters,
- * the Java class <a href="./hdf.hdf5lib.HDF5CDataTypes.html"> <b>HDF5CDataTypes</b></a> looks up the values
+ * The HDF5 API defines a set of values that describe number types and sizes, such as "H5T_NATIVE_INT" and
+ * "hsize_t". These values are determined at run time by the HDF5 C library. To support these parameters,
+ * the Java HDFConstants class looks up the values
  * when initiated. The values can be accessed as public variables of the Java class, such as:
  *
- * <pre>
- * long data_type = HDF5CDataTypes.JH5T_NATIVE_INT;
- * </pre>
+ * @code
+ * long data_type = HDFConstants.H5T_NATIVE_INT;
+ * @endcode
  *
  * The Java application uses both types of constants the same way, the only difference is that the
- * <b><i>HDF5CDataTypes</i></b> may have different values on different platforms.
- * <p>
- * <b>Error handling and Exceptions</b>
+ * <b><i>HDFConstants</i></b> may have different values on different platforms.
  * <p>
- * The HDF5 error API (H5E) manages the behavior of the error stack in the HDF-5 library. This API is omitted
- * from the JHI5. Errors are converted into Java exceptions. This is totally different from the C interface,
- * but is very natural for Java programming.
+ * <b>@ref ERRORS</b>
  * <p>
- * The exceptions of the JHI5 are organized as sub-classes of the class
- * <a href="./hdf.hdf5lib.exceptions.HDF5Exception.html"> <b>HDF5Exception</b></a>. There are two subclasses
- * of
- * <b>HDF5Exception</b>, <a href="./hdf.hdf5lib.exceptions.HDF5LibraryException.html">
- <b>HDF5LibraryException</b></a>
- * and <a href="./hdf.hdf5lib.exceptions.HDF5JavaException.html"> <b>HDF5JavaException</b></a>. The
- * sub-classes of the former represent errors from the HDF-5 C library, while sub-classes of the latter
+ * The HDF5 error API (@ref H5E) manages the behavior of the error stack in the HDF5 library. This API is
+ * omitted from the JHI5. Errors are converted into Java exceptions. This is totally different from the C
+ * interface, but is very natural for Java programming. <p> The exceptions of the JHI5 are organized as
+ * sub-classes of the class
+ * @ref ERRORS <b>HDF5Exception</b>. There are two subclasses of
+ * <b>HDF5Exception</b>, @ref ERRORSLIB <b>HDF5LibraryException</b>
+ * and @ref ERRORSJAVA <b>HDF5JavaException</b>. The
+ * sub-classes of the former represent errors from the HDF5 C library, while sub-classes of the latter
  * represent errors in the JHI5 wrapper and support code.
  * <p>
  * The super-class <b><i>HDF5LibraryException</i></b> implements the method '<b><i>printStackTrace()</i></b>',
- * which prints out the HDF-5 error stack, as described in the HDF-5 C API <i><b>H5Eprint()</b>.</i> This may
- * be used by Java exception handlers to print out the HDF-5 error stack.
- * <hr>
+ * which prints out the HDF5 error stack, as described in the HDF5 C API <i><b>@ref H5Eprint()</b>.</i> This
+ * may be used by Java exception handlers to print out the HDF5 error stack. <hr>
+ *
+ * @version HDF5 1.10.10 <br />
+ *          <b>See also: </b>
+ *          @ref HDFARRAY hdf.hdf5lib.HDFArray<br />
+ *          @ref HDF5CONST hdf.hdf5lib.HDF5Constants<br />
+ *          @ref ERRORS hdf.hdf5lib.HDF5Exception<br />
+ *          <a href="https://hdfgroup.org/HDF5/">HDF5</a>
+ *
+ * For details of the HDF5 library, @see @ref RM
+ */
+
+/**
+ * This class is the Java interface for the HDF5 library.
  *
- * @version HDF5 1.10.10 <BR>
- *          <b>See also: <a href ="./hdf.hdf5lib.HDFArray.html"> hdf.hdf5lib.HDFArray</a> </b><BR>
- *          <a href ="./hdf.hdf5lib.HDF5Constants.html"> hdf.hdf5lib.HDF5Constants</a><BR>
- *          <a href ="./hdf.hdf5lib.HDF5CDataTypes.html"> hdf.hdf5lib.HDF5CDataTypes</a><BR>
- *          <a href ="./hdf.hdf5lib.HDF5Exception.html"> hdf.hdf5lib.HDF5Exception</a><BR>
- *          <a href="http://hdfgroup.org/HDF5/"> http://hdfgroup.org/HDF5"</a>
+ * @defgroup JH5 HDF5 Library Java Interface
+ *
+ * This code is the called by Java programs to access the entry points of the HDF5 library. Each routine wraps
+ * a single HDF5 entry point, generally with the arguments and return codes analogous to the C interface.
  *
  */
 public class H5 implements java.io.Serializable {
     /**
-     *
+     * Serialization ID
      */
     private static final long serialVersionUID = 6129888282117053288L;
 
     private final static org.slf4j.Logger log = org.slf4j.LoggerFactory.getLogger(H5.class);
 
     /**
-     * The version number of the HDF5 library:
-     * LIB_VERSION[0]: The major version of the library.
-     * LIB_VERSION[1]: The minor version of the library.
-     * LIB_VERSION[2]: The release number of the library.
+     * @ingroup JH5
      *
+     * The version number of the HDF5 library:
+     * <ul>
+     * <li>LIB_VERSION[0]: The major version of the library.</li>
+     * <li>LIB_VERSION[1]: The minor version of the library.</li>
+     * <li>LIB_VERSION[2]: The release number of the library.</li>
+     * </ul>
      * Make sure to update the versions number when a different library is used.
      */
     public final static int LIB_VERSION[] = {1, 10, 10};
 
     /**
+     * @ingroup JH5
+     *
      *  add system property to load library by path
      */
     public final static String H5PATH_PROPERTY_KEY = "hdf.hdf5lib.H5.hdf5lib";
 
     /**
+     * @ingroup JH5
+     *
      *  add system property to load library by name from library path, via System.loadLibrary()
      */
     public final static String H5_LIBRARY_NAME_PROPERTY_KEY = "hdf.hdf5lib.H5.loadLibraryName";
@@ -266,6 +289,8 @@ public class H5 implements java.io.Serializable {
     static { loadH5Lib(); }
 
     /**
+     * @ingroup JH5
+     *
      *  load native library
      */
     public static void loadH5Lib()
@@ -370,6 +395,8 @@ public class H5 implements java.io.Serializable {
     // ////////////////////////////////////////////////////////////
 
     /**
+     * @ingroup JH5
+     *
      * Get number of open IDs.
      *
      * @return Returns a count of open IDs
@@ -377,6 +404,8 @@ public class H5 implements java.io.Serializable {
     public final static int getOpenIDCount() { return OPEN_IDS.size(); }
 
     /**
+     * @ingroup JH5
+     *
      * Get the open IDs
      *
      * @return Returns a collection of open IDs
@@ -384,6 +413,8 @@ public class H5 implements java.io.Serializable {
     public final static Collection<Long> getOpenIDs() { return OPEN_IDS; }
 
     /**
+     * @ingroup JH5
+     *
      * H5check_version verifies that the arguments match the version numbers compiled into the library.
      *
      * @param majnum
@@ -395,47 +426,55 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful. Upon failure (when the versions do not match), this
      *            function causes the application to abort (i.e., crash)
      *
-     * See C API function: herr_t H5check_version()
+     * See C API function: @ref herr_t H5check_version(unsigned majnum, unsigned minnum, unsigned relnum)
      **/
     public synchronized static native int H5check_version(int majnum, int minnum, int relnum);
 
     /**
+     * @ingroup JH5
+     *
      * H5close flushes all data to disk, closes all file identifiers, and cleans up all memory used by the
      * library.
      *
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5close() throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5
+     *
      * H5open initialize the library.
      *
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5open() throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5
+     *
      * H5dont_atexit indicates to the library that an atexit() cleanup routine should not be installed. In
      * order to be effective, this routine must be called before any other HDF function calls, and must be
      * called each time the library is loaded/linked into the application (the first time and after it's been
-     * unloaded). <P> This is called by the static initializer, so this should never need to be explicitly
+     * unloaded). <p> This is called by the static initializer, so this should never need to be explicitly
      * called by a Java program.
      *
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     private synchronized static native int H5dont_atexit() throws HDF5LibraryException;
 
     /**
-     * Turn off error handling. By default, the C library prints the error stack of the HDF-5 C library on
+     * @ingroup JH5
+     *
+     * Turn off error handling. By default, the C library prints the error stack of the HDF5 C library on
      * stdout. This behavior may be disabled by calling H5error_off().
      *
      * @return a non-negative value if successful
@@ -443,29 +482,35 @@ public class H5 implements java.io.Serializable {
     public synchronized static native int H5error_off();
 
     /**
-     * Turn on error handling. By default, the C library prints the error stack of the HDF-5 C library on
+     * @ingroup JH5
+     *
+     * Turn on error handling. By default, the C library prints the error stack of the HDF5 C library on
      * stdout. This behavior may be re-enabled by calling H5error_on().
      */
     public synchronized static native void H5error_on();
 
     /**
+     * @ingroup JH5
+     *
      * H5garbage_collect collects on all free-lists of all types.
      *
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5garbage_collect() throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5
+     *
      * H5get_libversion retrieves the major, minor, and release numbers of the version of the HDF library
      * which is linked to the application.
      *
      * @param libversion
      *            The version information of the HDF library.
      *
-     *            <pre>
+     * <pre>
      *      libversion[0] = The major version of the library.
      *      libversion[1] = The minor version of the library.
      *      libversion[2] = The release number of the library.
@@ -473,11 +518,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful, along with the version information.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5get_libversion(int[] libversion) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5
+     *
      * H5set_free_list_limits
      *      Sets limits on the different kinds of free lists.  Setting a value
      *      of -1 for a limit means no limit of that type.  These limits are global
@@ -504,7 +551,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful, along with the version information.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      */
     public synchronized static native int H5set_free_list_limits(int reg_global_lim, int reg_list_lim,
                                                                  int arr_global_lim, int arr_list_lim,
@@ -512,6 +559,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5
+     *
      * H5export_dataset is a utility function to save data in a file.
      *
      * @param file_export_name
@@ -527,13 +576,15 @@ public class H5 implements java.io.Serializable {
      *            3 - export data as binary Big Endian.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5export_dataset(String file_export_name, long file_id,
                                                             String object_path, int binary_order)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5
+     *
      * H5export_dataset is a utility function to save data in a file.
      *
      * @param file_export_name
@@ -549,7 +600,7 @@ public class H5 implements java.io.Serializable {
      *            3 - export data as binary Big Endian.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static void H5export_dataset(String file_export_name, String file_name, String object_path,
                                         int binary_order) throws HDF5LibraryException
@@ -561,6 +612,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5
+     *
      * H5export_attribute is a utility function to save data in a file.
      *
      * @param file_export_name
@@ -576,13 +629,15 @@ public class H5 implements java.io.Serializable {
      *            3 - export data as binary Big Endian.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5export_attribute(String file_export_name, long dataset_id,
                                                               String attribute_name, int binary_order)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5
+     *
      * H5is_library_threadsafe Checks to see if the library was built with thread-safety enabled.
      *
      * @return true if hdf5 library implements threadsafe
@@ -597,11 +652,23 @@ public class H5 implements java.io.Serializable {
 
     // ////////////////////////////////////////////////////////////
     // //
-    // H5A: HDF5 1.8 Attribute Interface API Functions //
+    // H5A: HDF5 Attribute Interface API Functions //
     // //
     // ////////////////////////////////////////////////////////////
+    /**
+     * @defgroup JH5A Java Attribute (H5A) Interface
+     *
+     * An HDF5 attribute is a small metadata object describing the nature and/or intended usage of a primary
+     *data object. A primary data object may be a dataset, group, or committed datatype.
+     *
+     * @see H5A, C-API
+     *
+     * @see @ref H5A_UG, User Guide
+     **/
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aclose terminates access to the attribute specified by its identifier, attr_id.
      *
      * @param attr_id
@@ -610,7 +677,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static int H5Aclose(long attr_id) throws HDF5LibraryException
     {
@@ -626,6 +693,8 @@ public class H5 implements java.io.Serializable {
     private synchronized static native int _H5Aclose(long attr_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Acopy copies the content of one attribute to another.
      *
      * @param src_aid
@@ -636,11 +705,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      */
     public synchronized static native int H5Acopy(long src_aid, long dst_aid) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Acreate creates an attribute, attr_name, which is attached to the object specified by the identifier
      * loc_id.
      *
@@ -660,7 +731,7 @@ public class H5 implements java.io.Serializable {
      * @return An attribute identifier if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            Name is null.
      **/
@@ -677,6 +748,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5A
+     *
      * H5Acreate2 an attribute, attr_name, which is attached to the object specified by the identifier loc_id.
      *
      * @see public static long H5Acreate( long loc_id, String attr_name, long type_id, long space_id, long
@@ -687,6 +760,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Acreate_by_name creates an attribute, attr_name, which is attached to the object specified by loc_id
      * and obj_name.
      *
@@ -710,7 +785,7 @@ public class H5 implements java.io.Serializable {
      * @return An attribute identifier if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -734,6 +809,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Adelete removes the attribute specified by its name, name, from a dataset, group, or named datatype.
      *
      * @param loc_id
@@ -744,7 +821,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -752,6 +829,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Adelete_by_idx removes an attribute, specified by its location in an index, from an object.
      *
      * @param loc_id
@@ -768,7 +847,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Link access property list identifier
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            obj_name is null.
      **/
@@ -777,6 +856,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Adelete_by_name removes the attribute attr_name from an object specified by location and name, loc_id
      * and obj_name, respectively.
      *
@@ -792,7 +873,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -801,6 +882,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aexists determines whether the attribute attr_name exists on the object specified by obj_id.
      *
      * @param obj_id
@@ -811,7 +894,7 @@ public class H5 implements java.io.Serializable {
      * @return boolean true if an attribute with a given name exists.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            attr_name is null.
      **/
@@ -819,6 +902,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aexists_by_name determines whether the attribute attr_name exists on an object. That object is
      * specified by its location and name, loc_id and obj_name, respectively.
      *
@@ -834,7 +919,7 @@ public class H5 implements java.io.Serializable {
      * @return boolean true if an attribute with a given name exists, otherwise returns false.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -843,6 +928,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aget_info retrieves attribute information, by attribute identifier.
      *
      * @param attr_id
@@ -851,11 +938,13 @@ public class H5 implements java.io.Serializable {
      * @return A buffer(H5A_info_t) for Attribute information
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native H5A_info_t H5Aget_info(long attr_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aget_info_by_idx Retrieves attribute information, by attribute index position.
      *
      * @param loc_id
@@ -874,7 +963,7 @@ public class H5 implements java.io.Serializable {
      * @return A buffer(H5A_info_t) for Attribute information
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            obj_name is null.
      **/
@@ -884,6 +973,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aget_info_by_name Retrieves attribute information, by attribute name.
      *
      * @param loc_id
@@ -898,7 +989,7 @@ public class H5 implements java.io.Serializable {
      * @return A buffer(H5A_info_t) for Attribute information
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            obj_name is null.
      **/
@@ -907,6 +998,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aget_name retrieves the name of an attribute specified by the identifier, attr_id.
      *
      * @param attr_id
@@ -915,11 +1008,13 @@ public class H5 implements java.io.Serializable {
      * @return String for Attribute name.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native String H5Aget_name(long attr_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aget_name_by_idx retrieves the name of an attribute that is attached to an object, which is specified
      * by its location and name, loc_id and obj_name, respectively.
      *
@@ -948,6 +1043,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aget_space retrieves a copy of the dataspace for an attribute.
      *
      * @param attr_id
@@ -956,7 +1053,7 @@ public class H5 implements java.io.Serializable {
      * @return attribute dataspace identifier if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static long H5Aget_space(long attr_id) throws HDF5LibraryException
     {
@@ -972,6 +1069,8 @@ public class H5 implements java.io.Serializable {
     private synchronized static native long _H5Aget_space(long attr_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aget_storage_size returns the amount of storage that is required for the specified attribute,
      * attr_id.
      *
@@ -981,11 +1080,13 @@ public class H5 implements java.io.Serializable {
      * @return the amount of storage size allocated for the attribute; otherwise returns 0 (zero)
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native long H5Aget_storage_size(long attr_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aget_type retrieves a copy of the datatype for an attribute.
      *
      * @param attr_id
@@ -994,7 +1095,7 @@ public class H5 implements java.io.Serializable {
      * @return a datatype identifier if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static long H5Aget_type(long attr_id) throws HDF5LibraryException
     {
@@ -1010,6 +1111,8 @@ public class H5 implements java.io.Serializable {
     private synchronized static native long _H5Aget_type(long attr_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aopen opens an existing attribute, attr_name, that is attached to an object specified an object
      * identifier, object_id.
      *
@@ -1023,7 +1126,7 @@ public class H5 implements java.io.Serializable {
      * @return An attribute identifier if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            Name is null.
      **/
@@ -1043,6 +1146,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aopen_by_idx opens an existing attribute that is attached to an object specified by location and
      * name, loc_id and obj_name, respectively
      *
@@ -1064,7 +1169,7 @@ public class H5 implements java.io.Serializable {
      * @return An attribute identifier if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            Name is null.
      **/
@@ -1086,6 +1191,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aopen_by_name Opens an attribute for an object by object name and attribute name
      *
      * @param loc_id
@@ -1102,7 +1209,7 @@ public class H5 implements java.io.Serializable {
      * @return Returns an attribute identifier if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            obj_name is null.
      **/
@@ -1123,6 +1230,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aread reads an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is read into buffer from the file.
      *
@@ -1138,7 +1247,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -1147,6 +1256,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aread reads an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is read into buffer from the file.
      *
@@ -1160,7 +1271,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -1171,6 +1282,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aread reads an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is read into buffer from the file.
      *
@@ -1184,7 +1297,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -1195,6 +1308,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aread reads an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is read into data object from the file.
      *
@@ -1212,7 +1327,7 @@ public class H5 implements java.io.Serializable {
      * @exception HDF5Exception
      *            Failure in the data conversion.
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null. See public synchronized static native int H5Aread( )
      **/
@@ -1294,6 +1409,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aread reads an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is read into buffer of double from the file.
      *
@@ -1309,7 +1426,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -1318,6 +1435,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aread reads an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is read into buffer of double from the file.
      *
@@ -1331,7 +1450,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -1357,7 +1476,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -1366,6 +1485,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aread reads an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is read into buffer of float from the file.
      *
@@ -1379,7 +1500,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -1390,6 +1511,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aread reads an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is read into buffer of int from the file.
      *
@@ -1405,7 +1528,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -1414,6 +1537,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aread reads an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is read into buffer of int from the file.
      *
@@ -1427,7 +1552,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -1438,6 +1563,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aread reads an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is read into buffer of long from the file.
      *
@@ -1453,7 +1580,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -1462,6 +1589,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aread reads an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is read into buffer of long from the file.
      *
@@ -1475,7 +1604,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -1486,6 +1615,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aread reads an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is read into buffer of String from the file.
      *
@@ -1499,7 +1630,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -1507,6 +1638,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aread reads an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is read into buffer of short from the file.
      *
@@ -1522,7 +1655,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -1531,6 +1664,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aread reads an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is read into buffer  of shortfrom the file.
      *
@@ -1544,7 +1679,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -1555,6 +1690,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aread reads an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is read into buffer of variable-lenght from the file.
      *
@@ -1568,7 +1705,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -1576,6 +1713,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aread reads an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is read into buffer of String from the file.
      *
@@ -1589,7 +1728,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -1597,6 +1736,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aread reads an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is read into buffer of variable-lenght strings from the file.
      *
@@ -1610,7 +1751,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *             data buffer is null.
      **/
@@ -1618,6 +1759,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aread reads an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is read into buffer of string from the file.
      *
@@ -1631,7 +1774,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -1639,8 +1782,10 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Arename changes the name of attribute that is attached to the object specified by loc_id. The
-     *attribute named old_attr_name is renamed new_attr_name.
+     * attribute named old_attr_name is renamed new_attr_name.
      *
      * @param loc_id
      *            IN: Location or object identifier; may be dataset or group
@@ -1652,7 +1797,7 @@ public class H5 implements java.io.Serializable {
      * @return A non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            Name is null.
      **/
@@ -1660,6 +1805,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Arename_by_name changes the name of attribute that is attached to the object specified by loc_id and
      * obj_name. The attribute named old_attr_name is renamed new_attr_name.
      *
@@ -1677,7 +1824,7 @@ public class H5 implements java.io.Serializable {
      * @return A non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            Name is null.
      **/
@@ -1686,6 +1833,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Awrite writes an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is written from buf to the file.
      *
@@ -1701,7 +1850,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data is null.
      **/
@@ -1710,6 +1859,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Awrite writes an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is written from buf to the file.
      *
@@ -1723,7 +1874,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data is null.
      **/
@@ -1734,6 +1885,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5A
+     *
      * H5Awrite writes an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is written from buf to the file.
      *
@@ -1747,7 +1900,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data is null.
      **/
@@ -1758,6 +1911,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5A
+     *
      * H5Awrite writes an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is written from data object to the file.
      *
@@ -1775,7 +1930,7 @@ public class H5 implements java.io.Serializable {
      * @exception HDF5Exception
      *            Failure in the data conversion.
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data object is null
      **/
@@ -1834,6 +1989,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5A
+     *
      * H5Awrite writes an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is written from buffer of double to the file.
      *
@@ -1849,7 +2006,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *             Error from the HDF-5 Library.
+     *             Error from the HDF5 Library.
      * @exception NullPointerException
      *            data is null.
      **/
@@ -1858,6 +2015,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Awrite writes an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is written from buffer of double to the file.
      *
@@ -1871,7 +2030,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data is null.
      **/
@@ -1882,6 +2041,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5A
+     *
      * H5Awrite writes an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is written from buffer of float to the file.
      *
@@ -1897,7 +2058,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data is null.
      **/
@@ -1906,6 +2067,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Awrite writes an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is written from buffer of float to the file.
      *
@@ -1919,7 +2082,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data is null.
      **/
@@ -1930,6 +2093,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5A
+     *
      * H5Awrite writes an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is written from buffer of int to the file.
      *
@@ -1945,7 +2110,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data is null.
      **/
@@ -1954,6 +2119,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Awrite writes an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is written from buffer of int to the file.
      *
@@ -1967,7 +2134,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data is null.
      **/
@@ -1978,6 +2145,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5A
+     *
      * H5Awrite writes an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is written from buffer of long to the file.
      *
@@ -1993,7 +2162,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data is null.
      **/
@@ -2002,6 +2171,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Awrite writes an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is written from buffer of long to the file.
      *
@@ -2015,7 +2186,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data is null.
      **/
@@ -2026,6 +2197,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5A
+     *
      * H5Awrite writes an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is written from buffer of short to the file.
      *
@@ -2041,7 +2214,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data is null.
      **/
@@ -2050,6 +2223,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Awrite writes an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is written from buffer of short to the file.
      *
@@ -2063,7 +2238,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data is null.
      **/
@@ -2074,6 +2249,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5A
+     *
      * H5Awrite writes an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is written from buffer of string to the file.
      *
@@ -2087,7 +2264,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data is null.
      **/
@@ -2095,6 +2272,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Awrite writes an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is written from buffer of variable-lenght to the file.
      *
@@ -2108,7 +2287,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data is null.
      **/
@@ -2116,6 +2295,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Awrite_VLStrings writes a variable length String dataset, specified by its identifier attr_id, from
      * the application memory buffer buffer of variable-lenght strings into the file.
      *
@@ -2131,7 +2312,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -2140,6 +2321,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aget_create_plist retrieves a copy of the attribute creation property list identifier.
      *
      * @param attr_id
@@ -2148,7 +2331,7 @@ public class H5 implements java.io.Serializable {
      * @return identifier for the attribute's creation property list if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static long H5Aget_create_plist(long attr_id) throws HDF5LibraryException
     {
@@ -2164,6 +2347,8 @@ public class H5 implements java.io.Serializable {
     private synchronized static native long _H5Aget_create_plist(long attr_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aiterate2 iterates over the attributes attached to a dataset, named datatype, or group, as
      * specified by obj_id. For each attribute, user-provided data, op_data, with additional information
      * as defined below, is passed to a user-defined function, op, which operates on that attribute.
@@ -2196,7 +2381,7 @@ public class H5 implements java.io.Serializable {
      *            members were processed with no operator returning non-zero.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            buf is null.
      **/
@@ -2205,6 +2390,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aiterate_by_name iterates over the attributes attached to the dataset or group specified with loc_id
      * and obj_name. For each attribute, user-provided data, op_data, with additional information as defined
      * below, is passed to a user-defined function, op, which operates on that attribute.
@@ -2241,7 +2428,7 @@ public class H5 implements java.io.Serializable {
      *            members were processed with no operator returning non-zero.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            buf is null.
      **/
@@ -2287,8 +2474,13 @@ public class H5 implements java.io.Serializable {
     // H5D: Datasets Interface Functions //
     // //
     // ////////////////////////////////////////////////////////////
+    /**
+     * @defgroup JH5D Java Datasets (H5D) Interface
+     **/
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dcopy copies the content of one dataset to another dataset.
      *
      * @param src_did
@@ -2299,11 +2491,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      */
     public synchronized static native int H5Dcopy(long src_did, long dst_did) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dclose ends access to a dataset specified by dataset_id and releases resources used by it.
      *
      * @param dataset_id
@@ -2312,7 +2506,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static int H5Dclose(long dataset_id) throws HDF5LibraryException
     {
@@ -2328,6 +2522,8 @@ public class H5 implements java.io.Serializable {
     private synchronized static native int _H5Dclose(long dataset_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dcreate creates a new dataset named name at the location specified by loc_id.
      *
      * @param loc_id
@@ -2348,7 +2544,7 @@ public class H5 implements java.io.Serializable {
      * @return a dataset identifier
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -2365,6 +2561,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dcreate2 creates a new dataset named name at the location specified by loc_id.
      *
      * @see public static int H5Dcreate(int loc_id, String name, int type_id, int space_id, int lcpl_id, int
@@ -2375,6 +2573,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dcreate_anon creates a dataset in the file specified by loc_id.
      *
      * @param loc_id
@@ -2391,7 +2591,7 @@ public class H5 implements java.io.Serializable {
      * @return a dataset identifier
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static long H5Dcreate_anon(long loc_id, long type_id, long space_id, long dcpl_id, long dapl_id)
         throws HDF5LibraryException
@@ -2410,6 +2610,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dfill explicitly fills the dataspace selection in memory, space_id, with the fill value specified in
      * fill.
      *
@@ -2425,7 +2627,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Dataspace describing memory buffer and containing the selection to be filled.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            buf is null.
      **/
@@ -2434,6 +2636,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dget_access_plist returns an identifier for a copy of the dataset access property list for a dataset.
      *
      * @param dset_id
@@ -2442,11 +2646,13 @@ public class H5 implements java.io.Serializable {
      * @return a dataset access property list identifier
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native long H5Dget_access_plist(long dset_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dget_create_plist returns an identifier for a copy of the dataset creation property list for a
      * dataset.
      *
@@ -2455,7 +2661,7 @@ public class H5 implements java.io.Serializable {
      * @return a dataset creation property list identifier if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static long H5Dget_create_plist(long dataset_id) throws HDF5LibraryException
     {
@@ -2471,6 +2677,8 @@ public class H5 implements java.io.Serializable {
     private synchronized static native long _H5Dget_create_plist(long dataset_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dget_offset returns the address in the file of the dataset dset_id.
      *
      * @param dset_id
@@ -2479,11 +2687,13 @@ public class H5 implements java.io.Serializable {
      * @return the offset in bytes.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native long H5Dget_offset(long dset_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dget_space returns an identifier for a copy of the dataspace for a dataset.
      *
      * @param dataset_id
@@ -2492,7 +2702,7 @@ public class H5 implements java.io.Serializable {
      * @return a dataspace identifier if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static long H5Dget_space(long dataset_id) throws HDF5LibraryException
     {
@@ -2508,6 +2718,8 @@ public class H5 implements java.io.Serializable {
     private synchronized static native long _H5Dget_space(long dataset_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dget_space_status determines whether space has been allocated for the dataset dset_id.
      *
      * @param dset_id
@@ -2516,11 +2728,13 @@ public class H5 implements java.io.Serializable {
      * @return the space allocation status
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Dget_space_status(long dset_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dget_storage_size returns the amount of storage that is required for the dataset.
      *
      * @param dataset_id
@@ -2529,12 +2743,14 @@ public class H5 implements java.io.Serializable {
      * @return he amount of storage space allocated for the dataset.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native long H5Dget_storage_size(long dataset_id)
         throws HDF5LibraryException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dget_type returns an identifier for a copy of the datatype for a dataset.
      *
      * @param dataset_id
@@ -2543,7 +2759,7 @@ public class H5 implements java.io.Serializable {
      * @return a datatype identifier if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static long H5Dget_type(long dataset_id) throws HDF5LibraryException
     {
@@ -2559,6 +2775,8 @@ public class H5 implements java.io.Serializable {
     private synchronized static native long _H5Dget_type(long dataset_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Diterate iterates over all the data elements in the memory buffer buf, executing the callback
      * function operator once for each such data element.
      *
@@ -2577,7 +2795,7 @@ public class H5 implements java.io.Serializable {
      *            members were processed with no operator returning non-zero.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            buf is null.
      **/
@@ -2586,6 +2804,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dopen opens the existing dataset specified by a location identifier and name, loc_id and name,
      * respectively.
      *
@@ -2599,7 +2819,7 @@ public class H5 implements java.io.Serializable {
      * @return a dataset identifier if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -2616,6 +2836,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dopen2 opens the existing dataset specified by a location identifier and name, loc_id and name,
      * respectively.
      *
@@ -2625,6 +2847,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the
      * application memory buffer buf.
      *
@@ -2646,7 +2870,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -2656,6 +2880,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the
      * application memory buffer buf.
      *
@@ -2675,7 +2901,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -2687,6 +2913,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the
      * application memory buffer buf.
      *
@@ -2706,7 +2934,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -2718,6 +2946,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the
      * application data object.
      *
@@ -2741,7 +2971,7 @@ public class H5 implements java.io.Serializable {
      * @exception HDF5Exception
      *            Failure in the data conversion.
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data object is null.
      **/
@@ -2833,6 +3063,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the
      * application memory buffer of type double.
      *
@@ -2854,7 +3086,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -2864,6 +3096,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the
      * application memory buffer of type double.
      *
@@ -2883,7 +3117,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -2895,6 +3129,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the
      * application memory buffer of float.
      *
@@ -2916,7 +3152,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -2926,6 +3162,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the
      * application memory buffer of float.
      *
@@ -2945,7 +3183,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -2957,6 +3195,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the
      * application memory buffer of int.
      *
@@ -2978,7 +3218,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -2988,6 +3228,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the
      * application memory buffer of int.
      *
@@ -3007,7 +3249,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -3019,6 +3261,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the
      * application memory buffer of long.
      *
@@ -3040,7 +3284,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -3050,6 +3294,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the
      * application memory buffer of long.
      *
@@ -3069,7 +3315,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -3081,6 +3327,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the
      * application memory buffer of string.
      *
@@ -3100,7 +3348,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -3110,6 +3358,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the
      * application memory buffer of short.
      *
@@ -3131,7 +3381,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -3141,6 +3391,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the
      * application memory buffer of short.
      *
@@ -3160,7 +3412,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -3172,6 +3424,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the
      * application memory buffer of variable-lenght.
      *
@@ -3191,7 +3445,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -3200,6 +3454,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the
      * application memory buffer of string.
      *
@@ -3219,7 +3475,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -3228,6 +3484,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the
      * application memory buffer of variable-lenght strings.
      *
@@ -3247,7 +3505,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -3257,6 +3515,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dset_extent sets the current dimensions of the chunked dataset dset_id to the sizes specified in
      * size.
      *
@@ -3266,7 +3526,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Array containing the new magnitude of each dimension of the dataset.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            size is null.
      **/
@@ -3274,6 +3534,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dvlen_get_buf_size determines the number of bytes required to store the VL data from the dataset,
      * using the space_id for the selection in the dataset on disk and the type_id for the memory
      * representation of the VL data in memory.
@@ -3288,7 +3550,7 @@ public class H5 implements java.io.Serializable {
      * @return the size in bytes of the memory buffer required to store the VL data.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            buf is null.
      **/
@@ -3296,6 +3558,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dvlen_reclaim reclaims buffer used for VL data.
      *
      * @param type_id
@@ -3310,7 +3574,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            buf is null.
      **/
@@ -3319,6 +3583,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application
      * memory buffer into the file.
      *
@@ -3340,7 +3606,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -3350,6 +3616,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application
      * memory buffer into the file.
      *
@@ -3369,7 +3637,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -3381,6 +3649,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application
      * memory buffer into the file.
      *
@@ -3400,7 +3670,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -3412,6 +3682,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application
      * memory data object into the file.
      *
@@ -3435,7 +3707,7 @@ public class H5 implements java.io.Serializable {
      * @exception HDF5Exception
      *            Failure in the data conversion.
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data object is null.
      **/
@@ -3507,6 +3779,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application
      * memory buffer into the file.
      *
@@ -3528,7 +3802,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -3538,6 +3812,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application
      * memory buffer into the file.
      *
@@ -3557,7 +3833,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -3570,6 +3846,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application
      * memory buffer into the file.
      *
@@ -3591,7 +3869,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -3601,6 +3879,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application
      * memory buffer into the file.
      *
@@ -3620,7 +3900,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -3632,6 +3912,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application
      * memory buffer into the file.
      *
@@ -3653,7 +3935,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -3663,6 +3945,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application
      * memory buffer into the file.
      *
@@ -3682,7 +3966,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -3694,6 +3978,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application
      * memory buffer into the file.
      *
@@ -3715,7 +4001,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -3725,6 +4011,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application
      * memory buffer into the file.
      *
@@ -3744,7 +4032,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -3756,6 +4044,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application
      * memory buffer into the file.
      *
@@ -3777,7 +4067,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -3787,6 +4077,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application
      * memory buffer into the file.
      *
@@ -3806,7 +4098,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -3818,6 +4110,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application
      * memory buffer into the file.
      *
@@ -3837,7 +4131,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -3847,6 +4141,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application
      * memory buffer into the file.
      *
@@ -3866,7 +4162,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -3875,6 +4171,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dwrite_VLStrings writes a (partial) variable length String dataset, specified by its identifier
      * dataset_id, from the application memory buffer buf into the file.
      *
@@ -3896,7 +4194,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -3907,6 +4205,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dflush causes all buffers associated with a dataset to be immediately flushed to disk without
      * removing the data from the cache.
      *
@@ -3914,11 +4214,13 @@ public class H5 implements java.io.Serializable {
      *            IN: Identifier of the dataset to be flushed.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Dflush(long dset_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Drefresh causes all buffers associated with a dataset to be cleared and immediately re-loaded with
      * updated contents from disk. This function essentially closes the dataset, evicts all metadata
      * associated with it from the cache, and then re-opens the dataset. The reopened dataset is automatically
@@ -3928,7 +4230,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Identifier of the dataset to be refreshed.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Drefresh(long dset_id) throws HDF5LibraryException;
 
@@ -3948,8 +4250,14 @@ public class H5 implements java.io.Serializable {
     // H5E: Error Stack //
     // //
     // ////////////////////////////////////////////////////////////
+    /**
+     *
+     * @defgroup JH5E Java Error (H5E) Interface
+     */
 
     /**
+     * @ingroup JH5E
+     *
      * H5Eauto_is_v2 determines whether the error auto reporting function for an error stack conforms to the
      * H5E_auto2_t typedef or the H5E_auto1_t typedef.
      *
@@ -3960,19 +4268,21 @@ public class H5 implements java.io.Serializable {
      *            H5E_auto1_t.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native boolean H5Eauto_is_v2(long stack_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5E
+     *
      * H5Eclear clears the error stack for the current thread. H5Eclear can fail if there are problems
      * initializing the library. <p> This may be used by exception handlers to assure that the error condition
-     * in the HDF-5 library has been reset.
+     * in the HDF5 library has been reset.
      *
      * @return Returns a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static int H5Eclear() throws HDF5LibraryException
     {
@@ -3981,6 +4291,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5E
+     *
      * H5Eclear clears the error stack specified by estack_id, or, if estack_id is set to H5E_DEFAULT, the
      * error stack for the current thread.
      *
@@ -3988,11 +4300,13 @@ public class H5 implements java.io.Serializable {
      *            IN: Error stack identifier.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static void H5Eclear(long stack_id) throws HDF5LibraryException { H5Eclear2(stack_id); }
 
     /**
+     * @ingroup JH5E
+     *
      * H5Eclear2 clears the error stack specified by estack_id, or, if estack_id is set to H5E_DEFAULT, the
      * error stack for the current thread.
      *
@@ -4000,33 +4314,39 @@ public class H5 implements java.io.Serializable {
      *            IN: Error stack identifier.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Eclear2(long stack_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5E
+     *
      * H5Eclose_msg closes an error message identifier, which can be either a major or minor message.
      *
      * @param err_id
      *            IN: Error message identifier.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Eclose_msg(long err_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5E
+     *
      * H5Eclose_stack closes the object handle for an error stack and releases its resources.
      *
      * @param stack_id
      *            IN: Error stack identifier.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Eclose_stack(long stack_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5E
+     *
      * H5Ecreate_msg adds an error message to an error class defined by client library or application program.
      *
      * @param cls_id
@@ -4039,7 +4359,7 @@ public class H5 implements java.io.Serializable {
      * @return a message identifier
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            msg is null.
      **/
@@ -4047,16 +4367,20 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5E
+     *
      * H5Ecreate_stack creates a new empty error stack and returns the new stack's identifier.
      *
      * @return an error stack identifier
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native long H5Ecreate_stack() throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5E
+     *
      * H5Eget_class_name retrieves the name of the error class specified by the class identifier.
      *
      * @param class_id
@@ -4065,23 +4389,27 @@ public class H5 implements java.io.Serializable {
      * @return the name of the error class
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native String H5Eget_class_name(long class_id)
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5E
+     *
      * H5Eget_current_stack copies the current error stack and returns an error stack identifier for the new
      * copy.
      *
      * @return an error stack identifier
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native long H5Eget_current_stack() throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5E
+     *
      * H5Eset_current_stack replaces the content of the current error stack with a copy of the content of the
      * error stack specified by estack_id.
      *
@@ -4089,11 +4417,13 @@ public class H5 implements java.io.Serializable {
      *            IN: Error stack identifier.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Eset_current_stack(long stack_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5E
+     *
      * H5Eget_msg retrieves the error message including its length and type.
      *
      * @param msg_id
@@ -4104,12 +4434,14 @@ public class H5 implements java.io.Serializable {
      * @return the error message
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native String H5Eget_msg(long msg_id, int[] type_list)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5E
+     *
      * H5Eget_num retrieves the number of error records in the error stack specified by estack_id (including
      * major, minor messages and description).
      *
@@ -4119,12 +4451,14 @@ public class H5 implements java.io.Serializable {
      * @return the number of error messages
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native long H5Eget_num(long stack_id)
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5E
+     *
      * H5Eprint2 prints the error stack specified by estack_id on the specified stream, stream.
      *
      * @param stack_id
@@ -4134,12 +4468,14 @@ public class H5 implements java.io.Serializable {
      *            IN: File pointer, or stderr if null.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Eprint2(long stack_id, Object stream)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5E
+     *
      * H5Epop deletes the number of error records specified in count from the top of the error stack specified
      * by estack_id (including major, minor messages and description).
      *
@@ -4149,11 +4485,13 @@ public class H5 implements java.io.Serializable {
      *            IN: Version of the client library or application to which the error class belongs.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Epop(long stack_id, long count) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5E
+     *
      * H5Epush pushes a new error record onto the error stack specified by estack_id.
      *
      * @param stack_id
@@ -4174,7 +4512,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Error description string.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            file, func, or msg is null.
      **/
@@ -4184,6 +4522,8 @@ public class H5 implements java.io.Serializable {
         H5Epush2(stack_id, file, func, line, cls_id, maj_id, min_id, msg);
     }
     /**
+     * @ingroup JH5E
+     *
      * H5Epush2 pushes a new error record onto the error stack specified by estack_id.
      *
      * @param stack_id
@@ -4204,7 +4544,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Error description string.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            file, func, or msg is null.
      **/
@@ -4213,6 +4553,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5E
+     *
      * H5Eregister_class registers a client library or application program to the HDF5 error API so that the
      * client library or application program can report errors together with HDF5 library.
      *
@@ -4226,7 +4568,7 @@ public class H5 implements java.io.Serializable {
      * @return a class identifier
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -4234,17 +4576,21 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5E
+     *
      * H5Eunregister_class removes the error class specified by class_id.
      *
      * @param class_id
      *            IN: Error class identifier.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Eunregister_class(long class_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5E
+     *
      * H5Ewalk walks the error stack specified by estack_id for the current thread and calls the
      * function specified in func for each error along the way.
      *
@@ -4258,7 +4604,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Data to be passed with func.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            func is null.
      **/
@@ -4268,6 +4614,8 @@ public class H5 implements java.io.Serializable {
         H5Ewalk2(stack_id, direction, func, client_data);
     }
     /**
+     * @ingroup JH5E
+     *
      * H5Ewalk2 walks the error stack specified by estack_id for the current thread and calls the
      * function specified in func for each error along the way.
      *
@@ -4281,7 +4629,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Data to be passed with func.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            func is null.
      **/
@@ -4320,8 +4668,14 @@ public class H5 implements java.io.Serializable {
     // H5F: File Interface Functions //
     // //
     // ////////////////////////////////////////////////////////////
+    /**
+     *
+     * @defgroup JH5F Java File (H5F) Interface
+     */
 
     /**
+     * @ingroup JH5F
+     *
      * H5Fclose terminates access to an HDF5 file.
      *
      * @param file_id
@@ -4330,7 +4684,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static int H5Fclose(long file_id) throws HDF5LibraryException
     {
@@ -4346,6 +4700,8 @@ public class H5 implements java.io.Serializable {
     private synchronized static native int _H5Fclose(long file_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5F
+     *
      * H5Fopen opens an existing file and is the primary function for accessing existing HDF5 files.
      *
      * @param name
@@ -4358,7 +4714,7 @@ public class H5 implements java.io.Serializable {
      * @return a file identifier if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -4378,6 +4734,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5F
+     *
      * H5Freopen reopens an HDF5 file.
      *
      * @param file_id
@@ -4386,7 +4744,7 @@ public class H5 implements java.io.Serializable {
      * @return a new file identifier if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static long H5Freopen(long file_id) throws HDF5LibraryException
     {
@@ -4402,25 +4760,27 @@ public class H5 implements java.io.Serializable {
     private synchronized static native long _H5Freopen(long file_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5F
+     *
      * H5Fcreate is the primary function for creating HDF5 files.
      *
      * @param name
      *            Name of the file to access.
      * @param flags
      *            File access flags. Possible values include:
-     *            <UL>
-     *            <LI>
-     *            H5F_ACC_RDWR Allow read and write access to file.</LI>
-     *            <LI>
-     *            H5F_ACC_RDONLY Allow read-only access to file.</LI>
-     *            <LI>
-     *            H5F_ACC_TRUNC Truncate file, if it already exists, erasing all data previously stored in the
-     *                          file.</LI>
-     *            <LI>
-     *            H5F_ACC_EXCL Fail if file already exists.</LI>
-     *            <LI>
-     *            H5P_DEFAULT Apply default file access and creation properties.</LI>
-     *            </UL>
+     *            <ul>
+     *            <li>
+     *            @ref H5F_ACC_RDWR Allow read and write access to file.</li>
+     *            <li>
+     *            @ref H5F_ACC_RDONLY Allow read-only access to file.</li>
+     *            <li>
+     *            @ref H5F_ACC_TRUNC Truncate file, if it already exists, erasing all data previously stored
+     *                               in the file.</li>
+     *            <li>
+     *            @ref H5F_ACC_EXCL Fail if file already exists.</li>
+     *            <li>
+     *            @ref H5P_DEFAULT Apply default file access and creation properties.</li>
+     *            </ul>
      *
      * @param create_id
      *            File creation property list identifier, used when modifying default file meta-data. Use
@@ -4433,7 +4793,7 @@ public class H5 implements java.io.Serializable {
      * @return a file identifier if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -4453,8 +4813,10 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5F
+     *
      * H5Fflush causes all buffers associated with a file or object to be immediately flushed (written) to
-     * disk without removing the data from the (memory) cache. <P> After this call completes, the file (or
+     * disk without removing the data from the (memory) cache. <p> After this call completes, the file (or
      * object) is in a consistent state and all data written to date is assured to be permanent.
      *
      * @param object_id
@@ -4462,9 +4824,9 @@ public class H5 implements java.io.Serializable {
      *            associated with the file, including the file itself, a dataset, a group, an attribute,
      *            or a named data type.
      * @param scope
-     *            specifies the scope of the flushing action, in the case that the HDF-5 file is not a single
+     *            specifies the scope of the flushing action, in the case that the HDF5 file is not a single
      *            physical file.
-     *            <P> Valid values are:
+     *            <p> Valid values are:
      *            <UL>
      *            <LI> H5F_SCOPE_GLOBAL Flushes the entire virtual file.</LI>
      *            <LI> H5F_SCOPE_LOCAL Flushes only the specified file.</LI>
@@ -4473,11 +4835,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Fflush(long object_id, int scope) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5F
+     *
      * H5Fget_access_plist returns the file access property list identifier of the specified file.
      *
      * @param file_id
@@ -4486,7 +4850,7 @@ public class H5 implements java.io.Serializable {
      * @return a file access property list identifier if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static long H5Fget_access_plist(long file_id) throws HDF5LibraryException
     {
@@ -4502,6 +4866,8 @@ public class H5 implements java.io.Serializable {
     private synchronized static native long _H5Fget_access_plist(long file_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5F
+     *
      * H5Fget_create_plist returns a file creation property list identifier identifying the creation
      * properties used to create this file.
      *
@@ -4511,7 +4877,7 @@ public class H5 implements java.io.Serializable {
      * @return a file creation property list identifier if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static long H5Fget_create_plist(long file_id) throws HDF5LibraryException
     {
@@ -4527,6 +4893,8 @@ public class H5 implements java.io.Serializable {
     private synchronized static native long _H5Fget_create_plist(long file_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5F
+     *
      * H5Fget_filesize retrieves the file size of the HDF5 file. This function
      *              is called after an existing file is opened in order
      *              to learn the true size of the underlying file.
@@ -4537,11 +4905,13 @@ public class H5 implements java.io.Serializable {
      * @return the file size of the HDF5 file
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native long H5Fget_filesize(long file_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5F
+     *
      * H5Fget_freespace returns the amount of space that is unused by any objects in the file.
      *
      * @param file_id
@@ -4550,11 +4920,13 @@ public class H5 implements java.io.Serializable {
      * @return the amount of free space in the file
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native long H5Fget_freespace(long file_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5F
+     *
      * H5Fget_intent retrieves the intended access mode flag passed with H5Fopen when the file was opened.
      *
      * @param file_id
@@ -4563,11 +4935,13 @@ public class H5 implements java.io.Serializable {
      * @return the intended access mode flag, as originally passed with H5Fopen.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Fget_intent(long file_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5F
+     *
      * H5Fget_mdc_hit_rate queries the metadata cache of the target file to obtain its hit rate (cache hits /
      * (cache hits + cache misses)) since the last time hit rate statistics were reset.
      *
@@ -4577,11 +4951,13 @@ public class H5 implements java.io.Serializable {
      * @return the double in which the hit rate is returned.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native double H5Fget_mdc_hit_rate(long file_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5F
+     *
      * H5Fget_mdc_size queries the metadata cache of the target file for the desired size information.
      *
      * @param file_id
@@ -4597,7 +4973,7 @@ public class H5 implements java.io.Serializable {
      * @return current number of entries in the cache
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            metadata_cache is null.
      **/
@@ -4605,6 +4981,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5F
+     *
      * H5Fget_name retrieves the name of the file to which the object obj_id belongs.
      *
      * @param obj_id
@@ -4613,11 +4991,13 @@ public class H5 implements java.io.Serializable {
      * @return the filename.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native String H5Fget_name(long obj_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5F
+     *
      * H5Fget_obj_count returns the number of open object identifiers for the file.
      *
      * @param file_id
@@ -4637,12 +5017,14 @@ public class H5 implements java.io.Serializable {
      * @return the number of open objects.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native long H5Fget_obj_count(long file_id, int types)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5F
+     *
      * H5Fget_obj_ids returns the list of identifiers for all open HDF5 objects fitting the specified
      * criteria.
      *
@@ -4658,7 +5040,7 @@ public class H5 implements java.io.Serializable {
      * @return the number of objects placed into obj_id_list.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            obj_id_list is null.
      **/
@@ -4667,15 +5049,17 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5F
+     *
      * H5Fis_hdf5 determines whether a file is in the HDF5 format.
      *
      * @param name
      *            File name to check format.
      *
-     * @return true if is HDF-5, false if not.
+     * @return true if is HDF5, false if not.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -4683,6 +5067,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5F
+     *
      * H5Fmount mounts the file specified by child_id onto the group specified by loc_id and name using the
      * mount properties plist_id.
      *
@@ -4698,7 +5084,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -4706,6 +5092,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5F
+     *
      * Given a mount point, H5Funmount disassociates the mount point's file from the file mounted there.
      *
      * @param loc_id
@@ -4716,7 +5104,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -4724,6 +5112,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5F
+     *
      * H5Freset_mdc_hit_rate_stats resets the hit rate statistics counters in the metadata cache associated
      * with the specified file.
      *
@@ -4731,12 +5121,14 @@ public class H5 implements java.io.Serializable {
      *            IN: Identifier of the target file.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Freset_mdc_hit_rate_stats(long file_id)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5F
+     *
      * H5Fget_info returns global information for the file associated with the
      * object identifier obj_id.
      *
@@ -4745,11 +5137,13 @@ public class H5 implements java.io.Serializable {
      * @return A buffer(H5F_info2_t) for current "global" information about file
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native H5F_info2_t H5Fget_info(long obj_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5F
+     *
      * H5Fclear_elink_file_cache evicts all the cached child files in the specified file's external file
      * cache, causing them to be closed if there is nothing else holding them open.
      *
@@ -4757,12 +5151,14 @@ public class H5 implements java.io.Serializable {
      *            IN: Identifier of the target file.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Fclear_elink_file_cache(long file_id)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5F
+     *
      * H5Fstart_swmr_write will activate SWMR writing mode for a file associated with file_id. This routine
      * will prepare and ensure the file is safe for SWMR writing.
      *
@@ -4770,22 +5166,26 @@ public class H5 implements java.io.Serializable {
      *            IN: Identifier of the target file.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Fstart_swmr_write(long file_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5F
+     *
      * H5Fstart_mdc_logging starts logging metadata cache events if logging was previously enabled.
      *
      * @param file_id
      *            IN: Identifier of the target file.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Fstart_mdc_logging(long file_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5F
+     *
      * H5Fstop_mdc_logging stops logging metadata cache events if logging was previously enabled and is
      * currently ongoing.
      *
@@ -4793,11 +5193,13 @@ public class H5 implements java.io.Serializable {
      *            IN: Identifier of the target file.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Fstop_mdc_logging(long file_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5F
+     *
      * H5Fget_mdc_logging_status gets the current metadata cache logging status.
      *
      * @param file_id
@@ -4809,7 +5211,7 @@ public class H5 implements java.io.Serializable {
      *             mdc_logging_status[1] = is_currently_logging, whether events are currently being logged
      *
      * @exception HDF5LibraryException
-     *             Error from the HDF-5 Library.
+     *             Error from the HDF5 Library.
      * @exception NullPointerException
      *            mdc_logging_status is null.
      **/
@@ -4818,6 +5220,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5F
+     *
      * H5Fget_dset_no_attrs_hint gets the file-level setting to create minimized dataset object headers.
      *
      * @param file_id
@@ -4826,12 +5230,14 @@ public class H5 implements java.io.Serializable {
      * @return true if the file-level is set to create minimized dataset object headers, false if not.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native boolean H5Fget_dset_no_attrs_hint(long file_id)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5F
+     *
      * H5Fset_dset_no_attrs_hint sets the file-level setting to create minimized dataset object headers.
      *
      * @param file_id
@@ -4840,12 +5246,14 @@ public class H5 implements java.io.Serializable {
      *            the minimize hint setting
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Fset_dset_no_attrs_hint(long file_id, boolean minimize)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5F
+     *
      * H5Fset_libver_bounds sets a different low and high bounds while a file is open.
      *
      * @param file_id
@@ -4856,7 +5264,7 @@ public class H5 implements java.io.Serializable {
      *            IN: The latest version of the library that will be used for writing objects.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Fset_libver_bounds(long file_id, int low, int high)
         throws HDF5LibraryException;
@@ -4889,7 +5297,7 @@ public class H5 implements java.io.Serializable {
     // * @return a pointer to the file handle being used by the low-level
     // virtual file driver.
     // *
-    // * @exception HDF5LibraryException - Error from the HDF-5 Library.
+    // * @exception HDF5LibraryException - Error from the HDF5 Library.
     // **/
     // public synchronized static native Pointer file_handle
     // H5Fget_vfd_handle(int file_id, int fapl)
@@ -4906,7 +5314,7 @@ public class H5 implements java.io.Serializable {
     // *
     // * @return none
     // *
-    // * @exception HDF5LibraryException - Error from the HDF-5 Library.
+    // * @exception HDF5LibraryException - Error from the HDF5 Library.
     // * @exception NullPointerException - config_ptr is null.
     // **/
     // public synchronized static native void H5Fget_mdc_config(int file_id, H5AC_cache_config_t config_ptr)
@@ -4922,7 +5330,7 @@ public class H5 implements java.io.Serializable {
     // *
     // * @return none
     // *
-    // * @exception HDF5LibraryException - Error from the HDF-5 Library.
+    // * @exception HDF5LibraryException - Error from the HDF5 Library.
     // * @exception NullPointerException - config_ptr is null.
     // **/
     // public synchronized static native int H5Fset_mdc_config(int file_id, H5AC_cache_config_t config_ptr)
@@ -4967,8 +5375,13 @@ public class H5 implements java.io.Serializable {
     // H5G: Group Interface Functions //
     // //
     // ////////////////////////////////////////////////////////////
+    /**
+     * @defgroup JH5G Java Group (H5G) Interface
+     **/
 
     /**
+     * @ingroup JH5G
+     *
      * H5Gclose releases resources used by a group which was opened by a call to H5Gcreate() or H5Gopen().
      *
      * @param group_id
@@ -4977,7 +5390,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static int H5Gclose(long group_id) throws HDF5LibraryException
     {
@@ -4993,6 +5406,8 @@ public class H5 implements java.io.Serializable {
     private synchronized static native int _H5Gclose(long group_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5G
+     *
      * H5Gcreate creates a new group with the specified name at the specified location, loc_id.
      *
      * @param loc_id
@@ -5010,7 +5425,7 @@ public class H5 implements java.io.Serializable {
      * @return a valid group identifier
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -5031,6 +5446,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5G
+     *
      * H5Gcreate_anon creates a new empty group in the file specified by loc_id.
      *
      * @param loc_id
@@ -5044,7 +5461,7 @@ public class H5 implements java.io.Serializable {
      * @return a valid group identifier
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static long H5Gcreate_anon(long loc_id, long gcpl_id, long gapl_id) throws HDF5LibraryException
     {
@@ -5061,6 +5478,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5G
+     *
      * H5Gget_create_plist returns an identifier for the group creation property list associated with the
      * group specified by group_id.
      *
@@ -5070,11 +5489,13 @@ public class H5 implements java.io.Serializable {
      * @return an identifier for the group's creation property list
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native long H5Gget_create_plist(long group_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5G
+     *
      * H5Gget_info retrieves information about the group specified by group_id. The information is returned in
      * the group_info struct.
      *
@@ -5084,11 +5505,13 @@ public class H5 implements java.io.Serializable {
      * @return a structure in which group information is returned
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native H5G_info_t H5Gget_info(long group_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5G
+     *
      * H5Gget_info_by_idx retrieves information about a group, according to the group's position within an
      * index.
      *
@@ -5108,7 +5531,7 @@ public class H5 implements java.io.Serializable {
      * @return a structure in which group information is returned
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -5118,6 +5541,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5G
+     *
      * H5Gget_info_by_name retrieves information about the group group_name located in the file or group
      * specified by loc_id.
      *
@@ -5131,7 +5556,7 @@ public class H5 implements java.io.Serializable {
      * @return a structure in which group information is returned
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -5139,6 +5564,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5G
+     *
      * retrieves information of all objects under the group (name) located in the file or group specified by
      * loc_id.
      *
@@ -5156,7 +5583,7 @@ public class H5 implements java.io.Serializable {
      * @return the number of items found
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      */
@@ -5173,6 +5600,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5G
+     *
      * retrieves information of all objects under the group (name) located in the file or group specified by
      * loc_id.
      *
@@ -5194,7 +5623,7 @@ public class H5 implements java.io.Serializable {
      * @return the number of items found
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      */
@@ -5207,6 +5636,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5G
+     *
      * retrieves information of all objects under the group (name) located in the file or group specified by
      * loc_id.
      *
@@ -5230,7 +5661,7 @@ public class H5 implements java.io.Serializable {
      * @return the number of items found
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      */
@@ -5243,6 +5674,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5G
+     *
      * retrieves information of all objects under the group (name) located in the file or group specified by
      * loc_id.
      *
@@ -5268,7 +5701,7 @@ public class H5 implements java.io.Serializable {
      * @return the number of items found
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      */
@@ -5319,6 +5752,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5G
+     *
      * H5Gget_obj_info_idx report the name and type of object with index 'idx' in a Group. The 'idx'
      * corresponds to the index maintained by H5Giterate. Each link is returned, so objects with multiple
      * links will be counted once for each link.
@@ -5337,7 +5772,7 @@ public class H5 implements java.io.Serializable {
      * @return non-negative if successful, -1 if not.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      */
@@ -5361,6 +5796,8 @@ public class H5 implements java.io.Serializable {
      * a lot of time to finish if the number of objects is more than 10,000
      */
     /**
+     * @ingroup JH5G
+     *
      * retrieves information of all objects (recurvisely) under the group (name) located in the file or group
      * specified by loc_id up to maximum specified by objMax.
      *
@@ -5380,7 +5817,7 @@ public class H5 implements java.io.Serializable {
      * @return the number of items found
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      */
@@ -5420,6 +5857,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5G
+     *
      * H5Gn_members report the number of objects in a Group. The 'objects' include everything that will be
      * visited by H5Giterate. Each link is returned, so objects with multiple links will be counted once for
      * each link.
@@ -5432,7 +5871,7 @@ public class H5 implements java.io.Serializable {
      * @return the number of members in the group or -1 if error.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      */
@@ -5454,6 +5893,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5G
+     *
      * H5Gopen opens an existing group, name, at the location specified by loc_id.
      *
      * @param loc_id
@@ -5466,7 +5907,7 @@ public class H5 implements java.io.Serializable {
      * @return a valid group identifier if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -5486,6 +5927,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5G
+     *
      * H5Gflush causes all buffers associated with a group to be immediately flushed to disk without
      * removing the data from the cache.
      *
@@ -5493,11 +5936,13 @@ public class H5 implements java.io.Serializable {
      *            IN: Identifier of the group to be flushed.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Gflush(long group_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5G
+     *
      * H5Grefresh causes all buffers associated with a group to be cleared and immediately re-loaded
      * with updated contents from disk. This function essentially closes the group, evicts all metadata
      * associated with it from the cache, and then re-opens the group. The reopened group is automatically
@@ -5507,7 +5952,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Identifier of the group to be refreshed.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Grefresh(long group_id) throws HDF5LibraryException;
 
@@ -5540,8 +5985,13 @@ public class H5 implements java.io.Serializable {
     // H5I: HDF5 Identifier Interface API Functions //
     // //
     // ////////////////////////////////////////////////////////////
+    /**
+     * @defgroup JH5I Java Identifier (H5I) Interface
+     **/
 
     /**
+     * @ingroup JH5I
+     *
      * H5Iget_file_id obtains the file ID specified by the identifier, obj_id.
      *
      * @param obj_id
@@ -5550,11 +6000,13 @@ public class H5 implements java.io.Serializable {
      * @return the file ID.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native long H5Iget_file_id(long obj_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5I
+     *
      * H5Iget_name_long retrieves the name of an object specified by the identifier, obj_id.
      * @deprecated
      *
@@ -5568,12 +6020,14 @@ public class H5 implements java.io.Serializable {
      * @return the length of the name retrieved.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     @Deprecated
     public synchronized static native long H5Iget_name_long(long obj_id, String[] name, long size)
         throws HDF5LibraryException, NullPointerException;
     /**
+     * @ingroup JH5I
+     *
      * H5Iget_name retrieves the name of an object specified by the identifier, obj_id.
      *
      * @param obj_id
@@ -5582,11 +6036,13 @@ public class H5 implements java.io.Serializable {
      * @return String for Attribute name.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native String H5Iget_name(long obj_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5I
+     *
      * H5Iget_ref obtains the number of references outstanding specified by the identifier, obj_id.
      *
      * @param obj_id
@@ -5595,12 +6051,14 @@ public class H5 implements java.io.Serializable {
      * @return the reference count.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Iget_ref(long obj_id)
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5I
+     *
      * H5Idec_ref decrements the reference count specified by the identifier, obj_id.
      * If the reference count for an ID reaches zero, the object will be closed.
      *
@@ -5610,12 +6068,14 @@ public class H5 implements java.io.Serializable {
      * @return the reference count.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Idec_ref(long obj_id)
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5I
+     *
      * H5Iinc_ref increments the reference count specified by the identifier, obj_id.
      *
      * @param obj_id
@@ -5624,12 +6084,14 @@ public class H5 implements java.io.Serializable {
      * @return the reference count.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Iinc_ref(long obj_id)
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5I
+     *
      * H5Iget_type retrieves the type of the object identified by obj_id.
      *
      * @param obj_id
@@ -5638,11 +6100,13 @@ public class H5 implements java.io.Serializable {
      * @return the object type if successful; otherwise H5I_BADID.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Iget_type(long obj_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5I
+     *
      * H5Iget_type_ref retrieves the reference count on an ID type. The reference count is used by the library
      * to indicate when an ID type can be destroyed.
      *
@@ -5652,11 +6116,13 @@ public class H5 implements java.io.Serializable {
      * @return The current reference count on success, negative on failure.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Iget_type_ref(long type_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5I
+     *
      * H5Idec_type_ref decrements the reference count on an identifier type. The reference count is used by
      * the library to indicate when an identifier type can be destroyed. If the reference count reaches zero,
      * this function will destroy it.
@@ -5667,11 +6133,13 @@ public class H5 implements java.io.Serializable {
      * @return The current reference count on success, negative on failure.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Idec_type_ref(long type_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5I
+     *
      * H5Iinc_type_ref increments the reference count on an ID type. The reference count is used by the
      * library to indicate when an ID type can be destroyed.
      *
@@ -5681,11 +6149,13 @@ public class H5 implements java.io.Serializable {
      * @return The current reference count on success, negative on failure.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Iinc_type_ref(long type_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5I
+     *
      * H5Inmembers returns the number of identifiers of the identifier type specified in type.
      *
      * @param type_id
@@ -5694,11 +6164,13 @@ public class H5 implements java.io.Serializable {
      * @return Number of identifiers of the specified identifier type
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Inmembers(long type_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5I
+     *
      * H5Iis_valid indicates if the identifier type specified in obj_id is valid.
      *
      * @param obj_id
@@ -5707,11 +6179,13 @@ public class H5 implements java.io.Serializable {
      * @return a boolean, true if the specified identifier id is valid
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native boolean H5Iis_valid(long obj_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5I
+     *
      * H5Itype_exists indicates if the identifier type specified in type exists.
      *
      * @param type_id
@@ -5720,11 +6194,13 @@ public class H5 implements java.io.Serializable {
      * @return a boolean, true if the specified identifier type exists
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native boolean H5Itype_exists(int type_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5I
+     *
      * H5Iclear_type deletes all identifiers of the type identified by the argument type.
      *
      * @param type_id
@@ -5733,12 +6209,14 @@ public class H5 implements java.io.Serializable {
      *            IN: Whether or not to force deletion of all identifiers
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Iclear_type(int type_id, boolean force)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5I
+     *
      * H5Idestroy_type deletes an entire identifier type. All identifiers of this type are destroyed
      * and no new identifiers of this type can be registered.
      *
@@ -5746,7 +6224,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Identifier of identifier type which is to be destroyed
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Idestroy_type(int type_id) throws HDF5LibraryException;
 
@@ -5765,8 +6243,13 @@ public class H5 implements java.io.Serializable {
     // //////////////////////////////////////////////////////////////////
     // H5L: Link Interface Functions //
     // //////////////////////////////////////////////////////////////////
+    /**
+     * @defgroup JH5L Java Link (H5L) Interface
+     **/
 
     /**
+     * @ingroup JH5L
+     *
      * H5Lcopy copies a link from one location to another.
      *
      * @param src_loc
@@ -5783,7 +6266,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Link access property list identifier
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -5792,6 +6275,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5L
+     *
      * H5Lcreate_external creates a new soft link to an external object, which is an object in a different
      * HDF5 file from the location of the link.
      *
@@ -5809,7 +6294,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Link access property list identifier
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -5819,6 +6304,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5L
+     *
      * H5Lcreate_hard creates a new hard link to a pre-existing object in an HDF5 file.
      *
      * @param cur_loc
@@ -5835,7 +6322,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Link access property list identifier
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            cur_name or dst_name is null.
      **/
@@ -5844,6 +6331,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5L
+     *
      * H5Lcreate_soft creates a new soft link to an object in an HDF5 file.
      *
      * @param link_target
@@ -5858,7 +6347,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Link access property list identifier
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            link_name is null.
      **/
@@ -5867,6 +6356,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5L
+     *
      * H5Ldelete removes the link specified from a group.
      *
      * @param loc_id
@@ -5877,7 +6368,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Link access property list identifier
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -5885,6 +6376,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5L
+     *
      * H5Ldelete_by_idx removes the nth link in a group according to the specified order and in the specified
      * index.
      *
@@ -5902,7 +6395,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Link access property list identifier
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            group_name is null.
      **/
@@ -5911,6 +6404,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5L
+     *
      * H5Lexists checks if a link with a particular name exists in a group.
      *
      * @param loc_id
@@ -5923,7 +6418,7 @@ public class H5 implements java.io.Serializable {
      * @return a boolean, true if the name exists, otherwise false.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -5931,6 +6426,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5L
+     *
      * H5Lget_info returns information about the specified link.
      *
      * @param loc_id
@@ -5943,7 +6440,7 @@ public class H5 implements java.io.Serializable {
      * @return a buffer(H5L_info_t) for the link information.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -5951,6 +6448,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5L
+     *
      * H5Lget_info_by_idx opens a named datatype at the location specified by loc_id and return an identifier
      * for the datatype.
      *
@@ -5970,7 +6469,7 @@ public class H5 implements java.io.Serializable {
      * @return a buffer(H5L_info_t) for the link information.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            group_name is null.
      **/
@@ -5980,6 +6479,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5L
+     *
      * H5Lget_name_by_idx retrieves name of the nth link in a group, according to the order within a specified
      * field or index.
      *
@@ -5999,7 +6500,7 @@ public class H5 implements java.io.Serializable {
      * @return a String for the link name.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            group_name is null.
      **/
@@ -6008,6 +6509,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5L
+     *
      * H5Lget_value returns the link value of a symbolic link. Note that this function is a combination
      * of H5Lget_info(), H5Lget_val() and for external links, H5Lunpack_elink_val.
      *
@@ -6023,7 +6526,7 @@ public class H5 implements java.io.Serializable {
      * @return the link type
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -6032,6 +6535,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5L
+     *
      * H5Lget_value_by_idx retrieves value of the nth link in a group, according to the order within an index.
      * Note that this function is a combination of H5Lget_info(), H5Lget_val() and for external links,
      * H5Lunpack_elink_val.
@@ -6054,7 +6559,7 @@ public class H5 implements java.io.Serializable {
      * @return the link type
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            group_name is null.
      **/
@@ -6064,6 +6569,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5L
+     *
      * H5Literate iterates through links in a group.
      *
      * @param grp_id
@@ -6083,13 +6590,15 @@ public class H5 implements java.io.Serializable {
      *            members were processed with no operator returning non-zero.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Literate(long grp_id, int idx_type, int order, long idx,
                                                      H5L_iterate_cb op, H5L_iterate_t op_data)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5L
+     *
      * H5Literate_by_name iterates through links in a group.
      *
      * @param grp_id
@@ -6113,7 +6622,7 @@ public class H5 implements java.io.Serializable {
      *            members were processed with no operator returning non-zero.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            group_name is null.
      **/
@@ -6123,6 +6632,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5L
+     *
      * H5Lmove renames a link within an HDF5 file.
      *
      * @param src_loc
@@ -6139,7 +6650,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Link access property list identifier to be associated with the new link.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -6148,6 +6659,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5L
+     *
      * H5Lvisit recursively visits all links starting from a specified group.
      *
      * @param grp_id
@@ -6165,12 +6678,14 @@ public class H5 implements java.io.Serializable {
      *            members were processed with no operator returning non-zero.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Lvisit(long grp_id, int idx_type, int order, H5L_iterate_cb op,
                                                    H5L_iterate_t op_data) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5L
+     *
      * H5Lvisit_by_name recursively visits all links starting from a specified group.
      *
      * @param loc_id
@@ -6192,7 +6707,7 @@ public class H5 implements java.io.Serializable {
      *            members were processed with no operator returning non-zero.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            group_name is null.
      **/
@@ -6202,6 +6717,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5L
+     *
      * H5Lis_registered tests whether a user-defined link class is currently registered,
      * either by the HDF5 Library or by the user through the use of H5Lregister.
      *
@@ -6213,11 +6730,13 @@ public class H5 implements java.io.Serializable {
      *            user-defined class identifier.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Lis_registered(int link_cls_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5L
+     *
      * H5Lunregister unregisters a class of user-defined links, preventing them from being traversed, queried,
      * moved, etc.
      *
@@ -6225,7 +6744,7 @@ public class H5 implements java.io.Serializable {
      *            IN: User-defined link class identifier
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Lunregister(int link_cls_id) throws HDF5LibraryException;
 
@@ -6259,8 +6778,13 @@ public class H5 implements java.io.Serializable {
     // H5O: HDF5 1.8 Object Interface API Functions //
     // //
     // ////////////////////////////////////////////////////////////
+    /**
+     * @defgroup JH5O Java Object (H5O) Interface
+     **/
 
     /**
+     * @ingroup JH5O
+     *
      * H5Oclose closes the group, dataset, or named datatype specified.
      *
      * @param object_id
@@ -6269,7 +6793,7 @@ public class H5 implements java.io.Serializable {
      * @return non-negative on success
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static int H5Oclose(long object_id) throws HDF5LibraryException
     {
@@ -6285,6 +6809,8 @@ public class H5 implements java.io.Serializable {
     private synchronized static native int _H5Oclose(long object_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5O
+     *
      * H5Ocopy copies the group, dataset or named datatype specified from the file or group specified by
      * source location to the destination location.
      *
@@ -6302,7 +6828,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Link creation property list for the new hard link
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -6311,6 +6837,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5O
+     *
      * H5Oget_comment retrieves the comment for the specified object.
      *
      * @param obj_id
@@ -6319,12 +6847,14 @@ public class H5 implements java.io.Serializable {
      * @return the comment
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native String H5Oget_comment(long obj_id)
         throws HDF5LibraryException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5O
+     *
      * H5Oset_comment sets the comment for the specified object.
      *
      * @param obj_id
@@ -6333,7 +6863,7 @@ public class H5 implements java.io.Serializable {
      *            IN: The new comment.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      * @deprecated As of HDF5 1.8 in favor of object attributes.
      **/
@@ -6342,6 +6872,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5O
+     *
      * H5Oget_comment_by_name retrieves the comment for an object.
      *
      * @param loc_id
@@ -6354,7 +6886,7 @@ public class H5 implements java.io.Serializable {
      * @return the comment
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -6362,6 +6894,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, IllegalArgumentException, NullPointerException;
 
     /**
+     * @ingroup JH5O
+     *
      * H5Oset_comment_by_name sets the comment for the specified object.
      *
      * @param loc_id
@@ -6374,7 +6908,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Link access property list identifier.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      *
@@ -6386,6 +6920,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5O
+     *
      * H5Oget_info retrieves the metadata for an object specified by an identifier.
      *
      * @param loc_id
@@ -6394,7 +6930,7 @@ public class H5 implements java.io.Serializable {
      * @return object information
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -6404,6 +6940,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5O
+     *
      * H5Oget_info retrieves the metadata for an object specified by an identifier.
      *
      * @param loc_id
@@ -6414,7 +6952,7 @@ public class H5 implements java.io.Serializable {
      * @return object information
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -6422,6 +6960,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5O
+     *
      * H5Oget_info_by_idx retrieves the metadata for an object, identifying the object by an index position.
      *
      * @param loc_id
@@ -6441,7 +6981,7 @@ public class H5 implements java.io.Serializable {
      * @return object information
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -6454,6 +6994,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5O
+     *
      * H5Oget_info_by_idx retrieves the metadata for an object, identifying the object by an index position.
      *
      * @param loc_id
@@ -6475,7 +7017,7 @@ public class H5 implements java.io.Serializable {
      * @return object information
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -6485,6 +7027,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5O
+     *
      * H5Oget_info_by_name retrieves the metadata for an object, identifying the object by location and
      * relative name.
      *
@@ -6499,7 +7043,7 @@ public class H5 implements java.io.Serializable {
      * @return object information
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -6510,6 +7054,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5O
+     *
      * H5Oget_info_by_name retrieves the metadata for an object, identifying the object by location and
      * relative name.
      *
@@ -6526,7 +7072,7 @@ public class H5 implements java.io.Serializable {
      * @return object information
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -6535,6 +7081,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5O
+     *
      * H5Olink creates a new hard link to an object in an HDF5 file.
      *
      * @param obj_id
@@ -6549,7 +7097,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Access property list identifier.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -6558,6 +7106,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5O
+     *
      * H5Oopen opens a group, dataset, or named datatype specified by a location and a path name.
      *
      * @param loc_id
@@ -6570,7 +7120,7 @@ public class H5 implements java.io.Serializable {
      * @return an object identifier for the opened object
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -6590,6 +7140,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5O
+     *
      * H5Ovisit recursively visits all objects accessible from a specified object.
      *
      * @param obj_id
@@ -6608,7 +7160,7 @@ public class H5 implements java.io.Serializable {
      *            members were processed with no operator returning non-zero.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -6619,6 +7171,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5O
+     *
      * H5Ovisit recursively visits all objects accessible from a specified object.
      *
      * @param obj_id
@@ -6639,7 +7193,7 @@ public class H5 implements java.io.Serializable {
      *            members were processed with no operator returning non-zero.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -6648,6 +7202,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5O
+     *
      * H5Ovisit_by_name recursively visits all objects starting from a specified object.
      *
      * @param loc_id
@@ -6670,7 +7226,7 @@ public class H5 implements java.io.Serializable {
      *            members were processed with no operator returning non-zero.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -6683,6 +7239,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5O
+     *
      * H5Ovisit_by_name recursively visits all objects starting from a specified object.
      *
      * @param loc_id
@@ -6707,7 +7265,7 @@ public class H5 implements java.io.Serializable {
      *            members were processed with no operator returning non-zero.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -6717,6 +7275,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5O
+     *
      * H5Oexists_by_name is used by an application to check that an existing link resolves to an object.
      * Primarily, it is designed to check for dangling soft, external, or user-defined links.
      *
@@ -6730,7 +7290,7 @@ public class H5 implements java.io.Serializable {
      * @return Returns TRUE or FALSE if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -6738,28 +7298,34 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5O
+     *
      * H5Odecr_refcount decrements the hard link reference count for an object.
      *
      * @param object_id
      *            IN: Object identifier
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Odecr_refcount(long object_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5O
+     *
      * H5Oincr_refcount increments the hard link reference count for an object.
      *
      * @param object_id
      *            IN: Object identifier
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Oincr_refcount(long object_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5O
+     *
      * H5Oopen_by_addr opens a group, dataset, or named datatype using its address within an HDF5 file.
      *
      * @param loc_id
@@ -6770,7 +7336,7 @@ public class H5 implements java.io.Serializable {
      * @return an object identifier for the opened object
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static long H5Oopen_by_addr(long loc_id, long addr) throws HDF5LibraryException
     {
@@ -6789,6 +7355,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5O
+     *
      * H5Oopen_by_idx opens the nth object in the group specified.
      *
      * @param loc_id
@@ -6807,7 +7375,7 @@ public class H5 implements java.io.Serializable {
      * @return an object identifier for the opened object
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            group_name is null.
      **/
@@ -6828,6 +7396,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5O
+     *
      * H5Oflush causes all buffers associated with an object to be immediately flushed to disk without
      * removing the data from the cache. object_id can be any named object associated with an HDF5 file
      * including a dataset, a group, or a committed datatype.
@@ -6836,11 +7406,13 @@ public class H5 implements java.io.Serializable {
      *            IN: Identifier of the object to be flushed.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Oflush(long object_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5O
+     *
      * H5Orefresh causes all buffers associated with an object to be cleared and immediately re-loaded with
      * updated contents from disk. This function essentially closes the object, evicts all metadata associated
      * with it from the cache, and then re-opens the object. The reopened object is automatically
@@ -6851,11 +7423,13 @@ public class H5 implements java.io.Serializable {
      *            IN: Identifier of the object to be refreshed.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Orefresh(long object_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5O
+     *
      * H5Odisable_mdc_flushes corks an object, keeping dirty entries associated with the object in the
      * metadata cache.
      *
@@ -6863,7 +7437,10 @@ public class H5 implements java.io.Serializable {
      *            IN: Identifier of the object to be corked.
      **/
     public synchronized static native void H5Odisable_mdc_flushes(long object_id);
+
     /**
+     * @ingroup JH5O
+     *
      * H5Oenable_mdc_flushes uncorks an object, keeping dirty entries associated with the object in the
      * metadata cache.
      *
@@ -6871,7 +7448,10 @@ public class H5 implements java.io.Serializable {
      *            IN: Identifier of the object to be uncorked.
      **/
     public synchronized static native void H5Oenable_mdc_flushes(long object_id);
+
     /**
+     * @ingroup JH5O
+     *
      * H5Oare_mdc_flushes_disabled retrieve the object's "cork" status.
      *
      * @param object_id
@@ -6890,8 +7470,13 @@ public class H5 implements java.io.Serializable {
     // ////////////////////////////////////////////////////////////
 
     // /////// Generic property list routines ///////
+    /**
+     * @defgroup JH5P Java Property List (H5P) Interface
+     **/
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_class_name retrieves the name of a generic property list class
      *
      * @param plid
@@ -6899,11 +7484,13 @@ public class H5 implements java.io.Serializable {
      * @return name of a property list if successful; null if failed
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      */
     public synchronized static native String H5Pget_class_name(long plid) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pcreate creates a new property as an instance of some property list class.
      *
      * @param type
@@ -6912,7 +7499,7 @@ public class H5 implements java.io.Serializable {
      * @return a property list identifier (plist) if successful; otherwise Fail (-1).
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static long H5Pcreate(long type) throws HDF5LibraryException
     {
@@ -6928,6 +7515,8 @@ public class H5 implements java.io.Serializable {
     private synchronized static native long _H5Pcreate(long type) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget retrieves a copy of the value for a property in a property list (support integer only)
      *
      * @param plid
@@ -6937,11 +7526,13 @@ public class H5 implements java.io.Serializable {
      * @return value for a property if successful; a negative value if failed
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      */
     public synchronized static native int H5Pget(long plid, String name) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * Sets a property list value (support integer only)
      *
      * @param plid
@@ -6953,12 +7544,14 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; a negative value if failed
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      */
     public synchronized static native int H5Pset(long plid, String name, int value)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pexist determines whether a property exists within a property list or class
      *
      * @param plid
@@ -6969,11 +7562,13 @@ public class H5 implements java.io.Serializable {
      *     exist;
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      */
     public synchronized static native boolean H5Pexist(long plid, String name) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_size retrieves the size of a property's value in bytes
      *
      * @param plid
@@ -6983,11 +7578,13 @@ public class H5 implements java.io.Serializable {
      * @return size of a property's value if successful; a negative value if failed
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      */
     public synchronized static native long H5Pget_size(long plid, String name) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_nprops retrieves the number of properties in a property list or class
      *
      * @param plid
@@ -6995,11 +7592,13 @@ public class H5 implements java.io.Serializable {
      * @return number of properties if successful; a negative value if failed
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      */
     public synchronized static native long H5Pget_nprops(long plid) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_class returns the property list class for the property list identified by the plist parameter.
      *
      * @param plist
@@ -7007,11 +7606,13 @@ public class H5 implements java.io.Serializable {
      * @return a property list class if successful. Otherwise returns H5P_ROOT (-1).
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native long H5Pget_class(long plist) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_class_parent retrieves an identifier for the parent class of a property class
      *
      * @param plid
@@ -7019,11 +7620,13 @@ public class H5 implements java.io.Serializable {
      * @return a valid parent class object identifier if successful; a negative value if failed
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      */
     public synchronized static native long H5Pget_class_parent(long plid) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pequal determines if two property lists or classes are equal
      *
      * @param plid1
@@ -7034,11 +7637,13 @@ public class H5 implements java.io.Serializable {
      * @return positive value if equal; zero if unequal, a negative value if failed
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      */
     public synchronized static native int H5Pequal(long plid1, long plid2) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pequal determines if two property lists or classes are equal
      *
      * @param plid1
@@ -7049,7 +7654,7 @@ public class H5 implements java.io.Serializable {
      * @return TRUE if equal, FALSE if unequal
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      */
     public static boolean H5P_equal(long plid1, long plid2) throws HDF5LibraryException
     {
@@ -7059,6 +7664,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pisa_class checks to determine whether a property list is a member of the specified class
      *
      * @param plist
@@ -7068,11 +7675,13 @@ public class H5 implements java.io.Serializable {
      * @return a positive value if equal; zero if unequal; a negative value if failed
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      */
     public synchronized static native int H5Pisa_class(long plist, long pclass) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pcopy_prop copies a property from one property list or class to another
      *
      * @param dst_id
@@ -7084,12 +7693,14 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; a negative value if failed
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      */
     public synchronized static native int H5Pcopy_prop(long dst_id, long src_id, String name)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Premove removes a property from a property list
      *
      * @param plid
@@ -7099,11 +7710,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; a negative value if failed
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      */
     public synchronized static native int H5Premove(long plid, String name) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Punregister removes a property from a property list class
      *
      * @param plid
@@ -7113,11 +7726,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; a negative value if failed
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      */
     public synchronized static native int H5Punregister(long plid, String name) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * Closes an existing property list class
      *
      * @param plid
@@ -7125,7 +7740,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; a negative value if failed
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      */
     public static int H5Pclose_class(long plid) throws HDF5LibraryException
     {
@@ -7141,6 +7756,8 @@ public class H5 implements java.io.Serializable {
     private synchronized static native int _H5Pclose_class(long plid) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pclose terminates access to a property list.
      *
      * @param plist
@@ -7148,7 +7765,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static int H5Pclose(long plist) throws HDF5LibraryException
     {
@@ -7164,6 +7781,8 @@ public class H5 implements java.io.Serializable {
     private synchronized static native int _H5Pclose(long plist) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pcopy copies an existing property list to create a new property list.
      *
      * @param plist
@@ -7172,7 +7791,7 @@ public class H5 implements java.io.Serializable {
      * @return a property list identifier if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static long H5Pcopy(long plist) throws HDF5LibraryException
     {
@@ -7209,6 +7828,8 @@ public class H5 implements java.io.Serializable {
     // typedef herr_t (*H5P_iterate_t)(hid_t id, const char *name, void *iter_data);
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pcreate_class_nocb creates an new property class with no callback functions.
      *
      * @param parent_class
@@ -7219,7 +7840,7 @@ public class H5 implements java.io.Serializable {
      * @return a property list identifier if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static long H5Pcreate_class_nocb(long parent_class, String name) throws HDF5LibraryException
     {
@@ -7255,6 +7876,8 @@ public class H5 implements java.io.Serializable {
     //            H5P_cls_close_func_t close_data) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pregister2_nocb registers a property list with no callback functions.
      *
      * @param plist_class
@@ -7267,7 +7890,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Default value of the property
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *                - Error from the HDF5 Library.
      **/
     public synchronized static native void H5Pregister2_nocb(long plist_class, String name, long size,
                                                              byte[] def_value) throws HDF5LibraryException;
@@ -7278,6 +7901,8 @@ public class H5 implements java.io.Serializable {
     //          H5P_prp_compare_func_cb prp_cmp, H5P_prp_close_func_cb prp_close) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pinsert2_nocb inserts a property list with no callback functions.
      *
      * @param plist
@@ -7290,7 +7915,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Default value of the property
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Pinsert2_nocb(long plist, String name, long size, byte[] value)
         throws HDF5LibraryException;
@@ -7301,6 +7926,8 @@ public class H5 implements java.io.Serializable {
     //      H5P_prp_close_func_cb prp_close) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Piterate iterates over the properties in a property list or class
      *
      * @param  plist
@@ -7316,7 +7943,7 @@ public class H5 implements java.io.Serializable {
      *            zero if all properties have been processed
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            size is null.
      *
@@ -7327,6 +7954,8 @@ public class H5 implements java.io.Serializable {
     // /////// Object creation property list (OCPL) routines ///////
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_attr_phase_change retrieves attribute storage phase change thresholds.
      *
      * @param ocpl_id
@@ -7342,7 +7971,7 @@ public class H5 implements java.io.Serializable {
      * @return Returns a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            size is null.
      *
@@ -7351,6 +7980,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_attr_phase_change sets threshold values for attribute storage on an object. These
      *      thresholds determine the point at which attribute storage changes
      *      from compact storage (i.e., storage in the object header)
@@ -7364,7 +7995,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Minimum number of attributes to be stored in dense storage (Default: 6)
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native void H5Pset_attr_phase_change(long ocpl_id, int max_compact,
@@ -7372,6 +8003,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_attr_creation_order retrieves the settings for tracking and indexing attribute creation order on
      * an object.
      *
@@ -7381,13 +8014,15 @@ public class H5 implements java.io.Serializable {
      * @return Flags specifying whether to track and index attribute creation order
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pget_attr_creation_order(long ocpl_id)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_attr_creation_order sets flags specifying whether to track and index attribute creation order on
      * an object.
      *
@@ -7399,13 +8034,15 @@ public class H5 implements java.io.Serializable {
      * @return Returns a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pset_attr_creation_order(long ocpl_id, int crt_order_flags)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_obj_track_times queries the object creation property list, ocpl_id, to determine whether object
      * times are being recorded.
      *
@@ -7415,13 +8052,15 @@ public class H5 implements java.io.Serializable {
      * @return TRUE or FALSE, specifying whether object times are being recorded
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native boolean H5Pget_obj_track_times(long ocpl_id)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_obj_track_times sets a property in the object creation property list, ocpl_id, that governs the
      * recording of times associated with an object.
      *
@@ -7432,13 +8071,15 @@ public class H5 implements java.io.Serializable {
      *            IN: TRUE or FALSE, specifying whether object times are to be tracked
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native void H5Pset_obj_track_times(long ocpl_id, boolean track_times)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pmodify_filter modifies the specified FILTER in the transient or permanent output filter pipeline
      *              depending on whether PLIST is a dataset creation or dataset
      *              transfer property list.  The FLAGS argument specifies certain
@@ -7478,7 +8119,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name or an array is null.
      *
@@ -7488,6 +8129,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_filter adds the specified filter and corresponding properties to the end of an output filter
      * pipeline.
      *
@@ -7505,12 +8148,14 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Pset_filter(long plist, int filter, int flags, long cd_nelmts,
                                                         int[] cd_values) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_nfilters returns the number of filters defined in the filter pipeline associated with the
      * property list plist.
      *
@@ -7520,11 +8165,13 @@ public class H5 implements java.io.Serializable {
      * @return the number of filters in the pipeline if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Pget_nfilters(long plist) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_filter returns information about a filter, specified by its filter number, in a filter pipeline,
      * specified by the property list with which it is associated.
      *
@@ -7553,7 +8200,7 @@ public class H5 implements java.io.Serializable {
      * @exception ArrayStoreException
      *            Fatal error on Copyback
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name or an array is null.
      *
@@ -7567,6 +8214,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_filter2 returns information about a filter, specified by its filter number, in a filter
      * pipeline, specified by the property list with which it is associated.
      *
@@ -7581,6 +8230,8 @@ public class H5 implements java.io.Serializable {
                NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_filter_by_id returns information about the filter specified in filter_id, a filter identifier.
      * plist_id must be a dataset or group creation property list and filter_id must be in the associated
      * filter pipeline. The filter_id and flags parameters are used in the same manner as described in the
@@ -7613,7 +8264,7 @@ public class H5 implements java.io.Serializable {
      * @return the filter identification number if successful. Otherwise returns H5Z_FILTER_ERROR (-1).
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception ArrayIndexOutOfBoundsException
      *            Fatal error on Copyback
      * @exception ArrayStoreException
@@ -7631,6 +8282,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_filter_by_id2 returns information about a filter, specified by its filter id, in a filter
      * pipeline, specified by the property list with which it is associated.
      *
@@ -7654,7 +8307,7 @@ public class H5 implements java.io.Serializable {
      * @return the filter identification number if successful. Otherwise returns H5Z_FILTER_ERROR (-1).
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name or an array is null.
      *
@@ -7665,6 +8318,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pall_filters_avail query to verify that all the filters set
      *                      in the dataset creation property list are available currently.
      *
@@ -7676,12 +8331,14 @@ public class H5 implements java.io.Serializable {
      *            FALSE if one or more filters not currently available.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native boolean H5Pall_filters_avail(long dcpl_id)
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Premove_filter deletes a filter from the dataset creation property list;
      *                  deletes all filters if filter is H5Z_FILTER_NONE
      *
@@ -7693,12 +8350,14 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value and the size of the user block; if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Premove_filter(long obj_id, long filter)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_deflate sets the compression method for a dataset.
      *
      * @param plist
@@ -7709,11 +8368,13 @@ public class H5 implements java.io.Serializable {
      * @return non-negative if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Pset_deflate(long plist, int level) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_fletcher32 sets Fletcher32 checksum of EDC for a dataset creation
      *                   property list or group creation property list.
      *
@@ -7723,7 +8384,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value and the size of the user block; if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Pset_fletcher32(long plist)
         throws HDF5LibraryException, NullPointerException;
@@ -7731,6 +8392,8 @@ public class H5 implements java.io.Serializable {
     // /////// File creation property list (FCPL) routines ///////
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_userblock retrieves the size of a user block in a file creation property list.
      *
      * @param plist
@@ -7741,7 +8404,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value and the size of the user block; if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            size is null.
      **/
@@ -7749,6 +8412,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_userblock sets the user block size of a file creation property list.
      *
      * @param plist
@@ -7759,11 +8424,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Pset_userblock(long plist, long size) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_sizes retrieves the size of the offsets and lengths used in an HDF5 file. This function is only
      * valid for file creation property lists.
      *
@@ -7779,7 +8446,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value with the sizes initialized; if successful;
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            size is null.
      * @exception IllegalArgumentException
@@ -7789,6 +8456,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_sizes sets the byte size of the offsets and lengths used to address objects in an HDF5 file.
      *
      * @param plist
@@ -7801,12 +8470,14 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Pset_sizes(long plist, int sizeof_addr, int sizeof_size)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_sym_k retrieves the size of the symbol table B-tree 1/2 rank and the symbol table leaf node 1/2
      * size.
      *
@@ -7823,7 +8494,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            size is null.
      * @exception IllegalArgumentException
@@ -7833,6 +8504,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_sym_k sets the size of parameters used to control the symbol table nodes.
      *
      * @param plist
@@ -7845,12 +8518,14 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Pset_sym_k(long plist, int ik, int lk)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_istore_k queries the 1/2 rank of an indexed storage B-tree.
      *
      * @param plist
@@ -7861,7 +8536,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            ik array is null.
      **/
@@ -7869,6 +8544,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_istore_k sets the size of the parameter used to control the B-trees for indexing chunked
      * datasets.
      *
@@ -7880,11 +8557,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Pset_istore_k(long plist, int ik) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_shared_mesg_nindexes retrieves number of shared object header message indexes in file creation
      * property list.
      *
@@ -7895,13 +8574,15 @@ public class H5 implements java.io.Serializable {
      *         this property list
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pget_shared_mesg_nindexes(long fcpl_id)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_shared_mesg_nindexes sets the number of shared object header message indexes in the specified
      * file creation property list.
      *
@@ -7914,7 +8595,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception IllegalArgumentException
      *            Invalid value of nindexes
      *
@@ -7923,6 +8604,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_shared_mesg_index Retrieves the configuration settings for a shared message index.
      *
      * @param fcpl_id
@@ -7940,7 +8623,7 @@ public class H5 implements java.io.Serializable {
      * @return Returns a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            mesg_info is null.
      * @exception IllegalArgumentException
@@ -7952,6 +8635,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_shared_mesg_index Configures the specified shared object header message index
      *
      * @param fcpl_id
@@ -7966,7 +8651,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception IllegalArgumentException
      *            Invalid value of nindexes
      *
@@ -7976,6 +8661,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_shared_mesg_phase_change retrieves shared object header message phase change information.
      *
      * @param fcpl_id
@@ -7992,7 +8679,7 @@ public class H5 implements java.io.Serializable {
      * @return Returns a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            size is null.
      *
@@ -8001,6 +8688,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_shared_mesg_phase_change sets shared object header message storage phase change thresholds.
      *
      * @param fcpl_id
@@ -8015,7 +8704,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception IllegalArgumentException
      *            Invalid values of max_list and min_btree.
      *
@@ -8025,6 +8714,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_file_space_strategy sets the file space management strategy for the file associated with fcpl_id
      * to strategy. There are four strategies that applications can select and they are described in the
      * Parameters section.
@@ -8051,7 +8742,7 @@ public class H5 implements java.io.Serializable {
      *                is not to be modified.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception IllegalArgumentException
      *            Invalid values of max_list and min_btree.
      *
@@ -8061,6 +8752,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_file_space_strategy provides the means for applications to manage the HDF5 file's file space
      * strategy for their specific needs.
      *
@@ -8074,7 +8767,7 @@ public class H5 implements java.io.Serializable {
      * @return the current free-space strategy.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception IllegalArgumentException
      *            Invalid values of max_list and min_btree.
      *
@@ -8084,6 +8777,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_file_space_strategy_persist provides the means for applications to manage the HDF5 file's file
      * space strategy for their specific needs.
      *
@@ -8093,7 +8788,7 @@ public class H5 implements java.io.Serializable {
      * @return the current free-space persistence.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception IllegalArgumentException
      *            Invalid values of max_list and min_btree.
      *
@@ -8102,6 +8797,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_file_space_strategy_threshold provides the means for applications to manage the HDF5 file's file
      * space strategy for their specific needs.
      *
@@ -8111,7 +8808,7 @@ public class H5 implements java.io.Serializable {
      * @return the current free-space section threshold.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception IllegalArgumentException
      *            Invalid values of max_list and min_btree.
      *
@@ -8120,6 +8817,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_file_space_page_size retrieves the file space page size for aggregating small metadata or raw
      * data.
      *
@@ -8130,7 +8829,7 @@ public class H5 implements java.io.Serializable {
      *
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception IllegalArgumentException
      *            Invalid values of max_list and min_btree.
      *
@@ -8139,6 +8838,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_file_space_page_size Sets the file space page size for paged aggregation.
      *
      * @param fcpl_id
@@ -8147,7 +8848,7 @@ public class H5 implements java.io.Serializable {
      * @return the current file space page size.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception IllegalArgumentException
      *            Invalid values of max_list and min_btree.
      *
@@ -8158,6 +8859,8 @@ public class H5 implements java.io.Serializable {
     // /////// File access property list (FAPL) routines ///////
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_alignment retrieves the current settings for alignment properties from a file access property
      * list.
      *
@@ -8173,7 +8876,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            alignment array is null.
      * @exception IllegalArgumentException
@@ -8183,6 +8886,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_alignment sets the alignment properties of a file access property list so that any file object
      * &gt;= THRESHOLD bytes will be aligned on an address which is a multiple of ALIGNMENT.
      *
@@ -8196,12 +8901,14 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Pset_alignment(long plist, long threshold, long alignment)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_driver returns the identifier of the low-level file driver associated with the file access
      * property list or data transfer property list plid.
      *
@@ -8210,11 +8917,13 @@ public class H5 implements java.io.Serializable {
      * @return a valid low-level driver identifier if successful; a negative value if failed
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      */
     public synchronized static native long H5Pget_driver(long plid) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_family_offset gets offset for family driver.
      *
      * @param fapl_id
@@ -8223,12 +8932,14 @@ public class H5 implements java.io.Serializable {
      * @return the offset.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native long H5Pget_family_offset(long fapl_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_family_offset sets the offset for family driver.
      *
      * @param fapl_id
@@ -8239,13 +8950,15 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pset_family_offset(long fapl_id, long offset)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * Retrieves the maximum possible number of elements in the meta data cache and the maximum possible
      * number of bytes and the RDCC_W0 value in the raw data chunk cache.
      *
@@ -8263,7 +8976,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            an array is null.
      **/
@@ -8272,6 +8985,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_cache sets the number of elements (objects) in the meta data cache and the total number of bytes
      * in the raw data chunk cache.
      *
@@ -8289,13 +9004,15 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Pset_cache(long plist, int mdc_nelmts, long rdcc_nelmts,
                                                        long rdcc_nbytes, double rdcc_w0)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_mdc_config gets the initial metadata cache configuration contained in a file access property
      * list. This configuration is used when the file is opened.
      *
@@ -8305,12 +9022,14 @@ public class H5 implements java.io.Serializable {
      * @return A buffer(H5AC_cache_config_t) for the current metadata cache configuration information
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native H5AC_cache_config_t H5Pget_mdc_config(long plist_id)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_mdc_config sets the initial metadata cache configuration contained in a file access property
      * list and loads it into the instance of H5AC_cache_config_t pointed to by the config_ptr parameter. This
      * configuration is used when the file is opened.
@@ -8321,12 +9040,14 @@ public class H5 implements java.io.Serializable {
      *            IN: H5AC_cache_config_t, the initial metadata cache configuration.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Pset_mdc_config(long plist_id, H5AC_cache_config_t config_ptr)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_gc_references Returns the current setting for the garbage collection references property from a
      * file access property list.
      *
@@ -8336,11 +9057,13 @@ public class H5 implements java.io.Serializable {
      * @return GC is on (true) or off (false)
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native boolean H5Pget_gc_references(long fapl_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_gc_references Sets the flag for garbage collecting references for the file. Default value for
      * garbage collecting references is off.
      *
@@ -8352,12 +9075,14 @@ public class H5 implements java.io.Serializable {
      * @return non-negative if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Pset_gc_references(long fapl_id, boolean gc_ref)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_fclose_degree returns the degree for the file close behavior for a file access
      * property list.
      *
@@ -8367,12 +9092,14 @@ public class H5 implements java.io.Serializable {
      * @return the degree for the file close behavior
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Pget_fclose_degree(long fapl_id)
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_fclose_degree sets the degree for the file close behavior.
      *
      * @param fapl_id
@@ -8383,12 +9110,14 @@ public class H5 implements java.io.Serializable {
      * @return non-negative if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Pset_fclose_degree(long fapl_id, int degree)
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_meta_block_size the current metadata block size setting.
      *
      * @param fapl_id
@@ -8397,12 +9126,14 @@ public class H5 implements java.io.Serializable {
      * @return the minimum size, in bytes, of metadata block allocations.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native long H5Pget_meta_block_size(long fapl_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_meta_block_size sets the minimum metadata block size.
      *
      * @param fapl_id
@@ -8411,13 +9142,15 @@ public class H5 implements java.io.Serializable {
      *            IN: Minimum size, in bytes, of metadata block allocations.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native void H5Pset_meta_block_size(long fapl_id, long size)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_sieve_buf_size retrieves the current settings for the data sieve buffer size
      * property from a file access property list.
      *
@@ -8427,11 +9160,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value and the size of the user block; if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native long H5Pget_sieve_buf_size(long fapl_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_sieve_buf_size Sets the maximum size of the data seive buffer used for file
      *      drivers which are capable of using data sieving.  The data sieve
      *      buffer is used when performing I/O on datasets in the file.  Using a
@@ -8449,12 +9184,14 @@ public class H5 implements java.io.Serializable {
      *            IN: maximum size of the data seive buffer.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Pset_sieve_buf_size(long fapl_id, long size)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_small_data_block_size retrieves the size of a block of small data in a file creation property
      * list.
      *
@@ -8464,12 +9201,14 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value and the size of the user block; if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native long H5Pget_small_data_block_size(long plist)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_small_data_block_size reserves blocks of size bytes for the contiguous storage of the raw data
      * portion of small datasets.
      *
@@ -8481,12 +9220,14 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Pset_small_data_block_size(long plist, long size)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_libver_bounds retrieves the lower and upper bounds on the HDF5 Library versions that indirectly
      * determine the object formats versions used when creating objects in the file.
      *
@@ -8503,7 +9244,7 @@ public class H5 implements java.io.Serializable {
      * @return Returns a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            size is null.
      *
@@ -8512,6 +9253,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_libver_bounds Sets bounds on library versions, and indirectly format versions, to be used when
      * creating objects
      *
@@ -8526,7 +9269,7 @@ public class H5 implements java.io.Serializable {
      * @return Returns a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception IllegalArgumentException
      *            Argument is Illegal
      *
@@ -8535,6 +9278,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_elink_file_cache_size retrieves the size of the external link open file cache.
      *
      * @param fapl_id
@@ -8543,13 +9288,15 @@ public class H5 implements java.io.Serializable {
      * @return External link open file cache size in number of files.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pget_elink_file_cache_size(long fapl_id)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_elink_file_cache_size sets the number of files that can be held open in an external link open
      * file cache.
      *
@@ -8559,13 +9306,15 @@ public class H5 implements java.io.Serializable {
      *            IN: External link open file cache size in number of files.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native void H5Pset_elink_file_cache_size(long fapl_id, int efc_size)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_mdc_log_options sets metadata cache logging options.
      *
      * @param fapl_id
@@ -8578,7 +9327,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Whether the logging begins as soon as the file is opened or created.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            location is null.
      *
@@ -8588,6 +9337,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_mdc_log_options gets metadata cache logging options.
      *
      * @param fapl_id
@@ -8601,13 +9352,15 @@ public class H5 implements java.io.Serializable {
      * @return the location of log in UTF-8/ASCII (file path/name) (On Windows, this must be ASCII).
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native String H5Pget_mdc_log_options(long fapl_id, boolean[] mdc_log_options)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_metadata_read_attempts retrieves the number of read attempts that is set in the file access
      * property list plist_id.
      *
@@ -8617,13 +9370,15 @@ public class H5 implements java.io.Serializable {
      * @return The number of read attempts.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native long H5Pget_metadata_read_attempts(long plist_id)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_metadata_read_attempts sets the number of reads that the library will try when reading
      * checksummed metadata in an HDF5 file opened with SWMR access. When reading such metadata, the library
      * will compare the checksum computed for the metadata just read with the checksum stored within the piece
@@ -8638,13 +9393,15 @@ public class H5 implements java.io.Serializable {
      *            IN: The number of read attempts which is a value greater than 0.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native void H5Pset_metadata_read_attempts(long plist_id, long attempts)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_evict_on_close retrieves the file access property list setting that determines whether an HDF5
      * object will be evicted from the library's metadata cache when it is closed.
      *
@@ -8654,12 +9411,14 @@ public class H5 implements java.io.Serializable {
      * @return indication if the object will be evicted on close.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native boolean H5Pget_evict_on_close(long fapl_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_evict_on_close controls the library's behavior of evicting metadata associated with a closed
      * object.
      *
@@ -8669,13 +9428,15 @@ public class H5 implements java.io.Serializable {
      *            IN: Whether the HDF5 object should be evicted on close.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native void H5Pset_evict_on_close(long fapl_id, boolean evict_on_close)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_use_file_locking retrieves whether we are using file locking.
      *
      * @param fapl_id
@@ -8684,13 +9445,15 @@ public class H5 implements java.io.Serializable {
      * @return indication if file locking is used.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native boolean H5Pget_use_file_locking(long fapl_id)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_use_file_locking retrieves whether we ignore file locks when they are disabled.
      *
      * @param fapl_id
@@ -8699,13 +9462,15 @@ public class H5 implements java.io.Serializable {
      * @return indication if file locking is ignored.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native boolean H5Pget_ignore_disabled_file_locking(long fapl_id)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_file_locking sets parameters related to file locking.
      *
      * @param fapl_id
@@ -8719,7 +9484,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Whether file locking will be ignored when disabled on a file system (useful for Lustre).
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native void H5Pset_file_locking(long fapl_id, boolean use_file_locking,
@@ -8729,6 +9494,8 @@ public class H5 implements java.io.Serializable {
     // Dataset creation property list (DCPL) routines //
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_layout returns the layout of the raw data for a dataset.
      *
      * @param plist
@@ -8738,11 +9505,13 @@ public class H5 implements java.io.Serializable {
      *         H5D_LAYOUT_ERROR (-1).
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Pget_layout(long plist) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_layout sets the type of storage used store the raw data for a dataset.
      *
      * @param plist
@@ -8753,11 +9522,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Pset_layout(long plist, int layout) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_chunk retrieves the size of chunks for the raw data of a chunked layout dataset.
      *
      * @param plist
@@ -8770,7 +9541,7 @@ public class H5 implements java.io.Serializable {
      * @return chunk dimensionality successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            dims array is null.
      * @exception IllegalArgumentException
@@ -8780,6 +9551,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_chunk sets the size of the chunks used to store a chunked layout dataset.
      *
      * @param plist
@@ -8792,7 +9565,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            dims array is null.
      * @exception IllegalArgumentException
@@ -8802,6 +9575,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_chunk sets the size of the chunks used to store a chunked layout dataset.
      *
      * @param plist
@@ -8814,7 +9589,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5Exception
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            dims array is null.
      * @exception IllegalArgumentException
@@ -8838,6 +9613,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_virtual maps elements of the virtual dataset (VDS) described by the
      * virtual dataspace identifier vspace_id to the elements of the source dataset
      * described by the source dataset dataspace identifier src_space_id. The source
@@ -8861,7 +9638,7 @@ public class H5 implements java.io.Serializable {
      *                selection.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            an name string is null.
      * @exception IllegalArgumentException
@@ -8872,6 +9649,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_virtual_count gets the number of mappings for a virtual dataset that has the creation property
      * list specified by dcpl_id.
      *
@@ -8881,7 +9660,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative number of mappings if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception IllegalArgumentException
      *            An id is &lt;=0
      **/
@@ -8889,6 +9668,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_virtual_vspace takes the dataset creation property list for the virtual dataset, dcpl_id, and
      * the mapping index, index, and returns a dataspace identifier for the selection within the virtual
      * dataset used in the mapping.
@@ -8901,7 +9682,7 @@ public class H5 implements java.io.Serializable {
      * @return a valid dataspace identifier if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception IllegalArgumentException
      *            An id is &lt;=0
      **/
@@ -8909,6 +9690,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_virtual_srcspace takes the dataset creation property list for the virtual dataset, dcpl_id, and
      * the mapping index, index, and returns a dataspace identifier for the selection within the source
      * dataset used in the mapping.
@@ -8921,7 +9704,7 @@ public class H5 implements java.io.Serializable {
      * @return a valid dataspace identifier if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception IllegalArgumentException
      *            An id is &lt;=0
      **/
@@ -8929,6 +9712,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_virtual_filename takes the dataset creation property list for the virtual dataset, dcpl_id, the
      * mapping index, index, the size of the filename for a source dataset, size, and retrieves the name of
      * the file for a source dataset used in the mapping.
@@ -8941,7 +9726,7 @@ public class H5 implements java.io.Serializable {
      * @return the name of the file containing the source dataset if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception IllegalArgumentException
      *            An id is &lt;=0
      **/
@@ -8949,6 +9734,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_virtual_dsetname takes the dataset creation property list for the virtual dataset, dcpl_id, the
      * mapping index, index, the size of the dataset name for a source dataset, size, and retrieves the name
      * of the source dataset used in the mapping.
@@ -8961,7 +9748,7 @@ public class H5 implements java.io.Serializable {
      * @return the name of the source dataset if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception IllegalArgumentException
      *            An id is &lt;=0
      **/
@@ -8978,7 +9765,7 @@ public class H5 implements java.io.Serializable {
     //     * @return VDS link open file cache size in number of files.
     //     *
     //     * @exception HDF5LibraryException
-    //     *            Error from the HDF-5 Library.
+    //     *            Error from the HDF5 Library.
     //     *
     //     **/
     //    public synchronized static native int H5Pget_vds_file_cache_size(long fapl_id) throws
@@ -8994,13 +9781,15 @@ public class H5 implements java.io.Serializable {
     //     *            IN: VDS link open file cache size in number of files.
     //     *
     //     * @exception HDF5LibraryException
-    //     *            Error from the HDF-5 Library.
+    //     *            Error from the HDF5 Library.
     //     *
     //     **/
     //    public synchronized static native void H5Pset_vds_file_cache_size(long fapl_id, int efc_size)
     //            throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_external returns information about an external file.
      *
      * @param plist
@@ -9027,7 +9816,7 @@ public class H5 implements java.io.Serializable {
      * @exception ArrayStoreException
      *            Fatal error on Copyback
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name or size is null.
      * @exception IllegalArgumentException
@@ -9040,6 +9829,8 @@ public class H5 implements java.io.Serializable {
                NullPointerException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_external adds an external file to the list of external files.
      *
      * @param plist
@@ -9055,7 +9846,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -9063,6 +9854,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_external_count returns the number of external files for the specified dataset.
      *
      * @param plist
@@ -9071,11 +9864,13 @@ public class H5 implements java.io.Serializable {
      * @return the number of external files if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Pget_external_count(long plist) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_szip Sets up the use of the szip filter.
      *
      * @param plist
@@ -9088,13 +9883,15 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pset_szip(long plist, int options_mask, int pixels_per_block)
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_shuffle Sets up the use of the shuffle filter.
      *
      * @param plist_id
@@ -9103,13 +9900,15 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pset_shuffle(long plist_id)
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_nbit Sets up the use of the N-Bit filter.
      *
      * @param plist_id
@@ -9118,12 +9917,14 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pset_nbit(long plist_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_scaleoffset sets the Scale-Offset filter for a dataset.
      *
      * @param plist_id
@@ -9136,7 +9937,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception IllegalArgumentException
      *            Invalid arguments
      *
@@ -9145,6 +9946,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_fill_value queries the fill value property of a dataset creation property list.
      *
      * @param plist_id
@@ -9163,6 +9966,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5Exception;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_fill_value queries the fill value property of a dataset creation property list.
      *
      * @param plist_id
@@ -9191,6 +9996,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_fill_value sets the fill value for a dataset creation property list.
      *
      * @param plist_id
@@ -9209,6 +10016,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5Exception;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_fill_value sets the fill value for a dataset creation property list.
      *
      * @param plist_id
@@ -9237,6 +10046,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_fill_value checks if the fill value is defined for a dataset creation property list.
      *
      * @param plist_id
@@ -9257,6 +10068,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_alloc_time Gets space allocation time for dataset during creation.
      *
      * @param plist_id
@@ -9267,13 +10080,15 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pget_alloc_time(long plist_id, int[] alloc_time)
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_alloc_time Sets space allocation time for dataset during creation.
      *
      * @param plist_id
@@ -9284,13 +10099,15 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pset_alloc_time(long plist_id, int alloc_time)
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_fill_time Gets fill value writing time.
      *
      * @param plist_id
@@ -9301,13 +10118,15 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pget_fill_time(long plist_id, int[] fill_time)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_fill_time Sets the fill value writing time.
      *
      * @param plist_id
@@ -9318,13 +10137,15 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pset_fill_time(long plist_id, int fill_time)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_chunk_opts Sets the edge chunk option in a dataset creation property list.
      *
      * @param dcpl_id
@@ -9335,12 +10156,14 @@ public class H5 implements java.io.Serializable {
      *                0 - Disables option; partial edge chunks will be compressed.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library
+     *            Error from the HDF5 Library
      **/
     public synchronized static native void H5Pset_chunk_opts(long dcpl_id, int opts)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_chunk_opts retrieves the edge chunk option setting stored in the dataset creation property list
      *
      * @param dcpl_id
@@ -9349,12 +10172,14 @@ public class H5 implements java.io.Serializable {
      * @return The edge chunk option setting.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library
+     *            Error from the HDF5 Library
      *
    */
     public synchronized static native int H5Pget_chunk_opts(long dcpl_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_dset_no_attrs_hint accesses the flag for whether or not datasets created by the given dcpl
      * will be created with a "minimized" object header.
      *
@@ -9364,12 +10189,14 @@ public class H5 implements java.io.Serializable {
      * @return true if the given dcpl is set to create minimized dataset object headers, false if not.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native boolean H5Pget_dset_no_attrs_hint(long dcpl_id)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_dset_no_attrs_hint sets the dcpl to minimize (or explicitly to not minimized) dataset object
      * headers upon creation.
      *
@@ -9380,7 +10207,7 @@ public class H5 implements java.io.Serializable {
      *            IN: the minimize hint setting
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Pset_dset_no_attrs_hint(long dcpl_id, boolean minimize)
         throws HDF5LibraryException;
@@ -9388,6 +10215,8 @@ public class H5 implements java.io.Serializable {
     // /////// Dataset access property list (DAPL) routines ///////
 
     /**
+     * @ingroup JH5P
+     *
      * Retrieves the maximum possible number of elements in the meta data cache and the maximum possible
      * number of bytes and the RDCC_W0 value in the raw data chunk cache on a per-datset basis.
      *
@@ -9401,7 +10230,7 @@ public class H5 implements java.io.Serializable {
      *            IN/OUT: Preemption policy.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            an array is null.
      **/
@@ -9410,6 +10239,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_chunk_cache sets the number of elements (objects) in the meta data cache and the total number of
      * bytes in the raw data chunk cache on a per-datset basis.
      *
@@ -9423,13 +10254,15 @@ public class H5 implements java.io.Serializable {
      *            IN: Preemption policy.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Pset_chunk_cache(long dapl_id, long rdcc_nslots,
                                                               long rdcc_nbytes, double rdcc_w0)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_virtual_view takes the access property list for the virtual dataset, dapl_id, and the flag,
      * view, and sets the VDS view according to the flag value.
      *
@@ -9439,12 +10272,14 @@ public class H5 implements java.io.Serializable {
      *            IN: Flag specifying the extent of the data to be included in the view.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library
+     *            Error from the HDF5 Library
      **/
     public synchronized static native void H5Pset_virtual_view(long dapl_id, int view)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_virtual_view takes the virtual dataset access property list, dapl_id, and retrieves the flag,
      * view, set by the H5Pset_virtual_view call.
      *
@@ -9454,12 +10289,14 @@ public class H5 implements java.io.Serializable {
      * @return The flag specifying the view of the virtual dataset.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library
+     *            Error from the HDF5 Library
      *
    */
     public synchronized static native int H5Pget_virtual_view(long dapl_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_virtual_printf_gap sets the access property list for the virtual dataset, dapl_id, to instruct
      * the library to stop looking for the mapped data stored in the files and/or datasets with the
      * printf-style names after not finding gap_size files and/or datasets. The found source files and
@@ -9472,12 +10309,14 @@ public class H5 implements java.io.Serializable {
      *                the extent of an unlimited virtual dataset with printf-style mappings.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library
+     *            Error from the HDF5 Library
      **/
     public synchronized static native void H5Pset_virtual_printf_gap(long dapl_id, long gap_size)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_virtual_printf_gap returns the maximum number of missing printf-style files and/or datasets for
      * determining the extent of an unlimited virtual dataaset, gap_size, using the access property list for
      * the virtual dataset, dapl_id.
@@ -9489,13 +10328,15 @@ public class H5 implements java.io.Serializable {
      *            the extent of an unlimited virtual dataset with printf-style mappings.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library
+     *            Error from the HDF5 Library
      *
    */
     public synchronized static native long H5Pget_virtual_printf_gap(long dapl_id)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_virtual_prefix Retrieves prefix applied to virtual file paths.
      *
      * @param dapl_id
@@ -9504,12 +10345,14 @@ public class H5 implements java.io.Serializable {
      * @return the prefix to be applied to virtual file paths.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native String H5Pget_virtual_prefix(long dapl_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_virtual_prefix Sets prefix to be applied to virtual file paths.
      *
      * @param dapl_id
@@ -9518,7 +10361,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Prefix to be applied to virtual file paths
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            prefix is null.
      *
@@ -9527,6 +10370,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_efile_prefix Retrieves prefix applied to external file paths.
      *
      * @param dapl_id
@@ -9535,12 +10380,14 @@ public class H5 implements java.io.Serializable {
      * @return the prefix to be applied to external file paths.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native String H5Pget_efile_prefix(long dapl_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_efile_prefix Sets prefix to be applied to external file paths.
      *
      * @param dapl_id
@@ -9549,7 +10396,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Prefix to be applied to external file paths
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            prefix is null.
      *
@@ -9566,6 +10413,8 @@ public class H5 implements java.io.Serializable {
     // /////// Dataset xfer property list (DXPL) routines ///////
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_data_transform retrieves the data transform expression previously set in the dataset transfer
      * property list plist_id by H5Pset_data_transform.
      *
@@ -9581,7 +10430,7 @@ public class H5 implements java.io.Serializable {
      *
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception IllegalArgumentException
      *            Size is &lt;= 0.
      *
@@ -9591,6 +10440,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_data_transform sets a data transform expression
      *
      * @param plist_id
@@ -9601,7 +10452,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative valule if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            expression is null.
      *
@@ -9610,7 +10461,9 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
-     * HH5Pget_buffer gets type conversion and background buffers. Returns buffer size, in bytes, if
+     * @ingroup JH5P
+     *
+     * H5Pget_buffer gets type conversion and background buffers. Returns buffer size, in bytes, if
      * successful; otherwise 0 on failure.
      *
      * @param plist
@@ -9623,7 +10476,7 @@ public class H5 implements java.io.Serializable {
      * @return buffer size, in bytes, if successful; otherwise 0 on failure
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception IllegalArgumentException
      *            plist is invalid.
      **/
@@ -9631,6 +10484,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_buffer_size gets type conversion and background buffer size, in bytes, if successful;
      * otherwise 0 on failure.
      *
@@ -9640,7 +10495,7 @@ public class H5 implements java.io.Serializable {
      * @return buffer size, in bytes, if successful; otherwise 0 on failure
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception IllegalArgumentException
      *            plist is invalid.
      **/
@@ -9648,6 +10503,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_buffer sets type conversion and background buffers. status to TRUE or FALSE.
      *
      * Given a dataset transfer property list, H5Pset_buffer sets the maximum size for the type conversion
@@ -9668,7 +10525,7 @@ public class H5 implements java.io.Serializable {
      *            Size, in bytes, of the type conversion and background buffers.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception IllegalArgumentException
      *            plist is invalid.
      **/
@@ -9676,6 +10533,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_edc_check gets the error-detecting algorithm in use.
      *
      * @param plist
@@ -9684,11 +10543,13 @@ public class H5 implements java.io.Serializable {
      * @return the error-detecting algorithm
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Pget_edc_check(long plist) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_edc_check sets the error-detecting algorithm.
      *
      * @param plist
@@ -9699,11 +10560,13 @@ public class H5 implements java.io.Serializable {
      * @return non-negative if succeed
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Pset_edc_check(long plist, int check) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_btree_ratio Get the B-tree split ratios for a dataset transfer property list.
      *
      * @param plist_id
@@ -9718,7 +10581,7 @@ public class H5 implements java.io.Serializable {
      * @return non-negative if succeed
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            an input array is null.
      **/
@@ -9727,6 +10590,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_btree_ratio Sets B-tree split ratios for a dataset transfer property list. The split ratios
      * determine what percent of children go in the first node when a node splits.
      *
@@ -9742,12 +10607,14 @@ public class H5 implements java.io.Serializable {
      * @return non-negative if succeed
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Pset_btree_ratios(long plist_id, double left, double middle,
                                                               double right) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_hyper_vector_size reads values previously set with H5Pset_hyper_vector_size.
      *
      * @param dxpl_id
@@ -9758,13 +10625,15 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pget_hyper_vector_size(long dxpl_id, long[] vector_size)
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_hyper_vector_size sets the number of
      *              "I/O vectors" (offset and length pairs) which are to be
      *              accumulated in memory before being issued to the lower levels
@@ -9784,7 +10653,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pset_hyper_vector_size(long dxpl_id, long vector_size)
@@ -9793,6 +10662,8 @@ public class H5 implements java.io.Serializable {
     // /////// Link creation property list (LCPL) routines ///////
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_create_intermediate_group determines whether property is set to enable creating missing
      * intermediate groups.
      *
@@ -9802,13 +10673,15 @@ public class H5 implements java.io.Serializable {
      * @return Boolean true or false
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native boolean H5Pget_create_intermediate_group(long lcpl_id)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_create_intermediate_group specifies in property list whether to create missing intermediate
      * groups
      *
@@ -9820,7 +10693,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative valule if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pset_create_intermediate_group(long lcpl_id,
@@ -9830,6 +10703,8 @@ public class H5 implements java.io.Serializable {
     // /////// Group creation property list (GCPL) routines ///////
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_local_heap_size_hint Retrieves the anticipated size of the local heap for original-style groups.
      *
      * @param gcpl_id
@@ -9838,13 +10713,15 @@ public class H5 implements java.io.Serializable {
      * @return size_hint, the anticipated size of local heap
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native long H5Pget_local_heap_size_hint(long gcpl_id)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_local_heap_size_hint Specifies the anticipated maximum size of a local heap.
      *
      * @param gcpl_id
@@ -9855,13 +10732,15 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pset_local_heap_size_hint(long gcpl_id, long size_hint)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_link_phase_change Queries the settings for conversion between compact and dense groups.
      *
      * @param gcpl_id
@@ -9878,7 +10757,7 @@ public class H5 implements java.io.Serializable {
      * @return Returns a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            size is null.
      *
@@ -9887,6 +10766,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_link_phase_change Sets the parameters for conversion between compact and dense groups.
      *
      * @param gcpl_id
@@ -9899,7 +10780,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception IllegalArgumentException
      *            Invalid values of max_compact and min_dense.
      *
@@ -9909,6 +10790,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_est_link_info Queries data required to estimate required local heap or object header size.
      *
      * @param gcpl_id
@@ -9925,7 +10808,7 @@ public class H5 implements java.io.Serializable {
      * @return Returns a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            link_info is null.
      *
@@ -9934,6 +10817,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_est_link_info Sets estimated number of links and length of link names in a group.
      *
      * @param gcpl_id
@@ -9946,7 +10831,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception IllegalArgumentException
      *            Invalid values to est_num_entries and est_name_len.
      *
@@ -9956,6 +10841,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_link_creation_order queries the group creation property list, gcpl_id, and returns a flag
      * indicating whether link creation order is tracked and/or indexed in a group.
      *
@@ -9965,13 +10852,15 @@ public class H5 implements java.io.Serializable {
      * @return crt_order_flags -Creation order flag(s)
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pget_link_creation_order(long gcpl_id)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_link_creation_order Sets flags in a group creation property list, gcpl_id, for tracking and/or
      * indexing links on creation order.
      *
@@ -9984,7 +10873,7 @@ public class H5 implements java.io.Serializable {
      * @return Returns a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pset_link_creation_order(long gcpl_id, int crt_order_flags)
@@ -9993,6 +10882,8 @@ public class H5 implements java.io.Serializable {
     // /////// String creation property list (STRCPL) routines ///////
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_char_encoding gets the character encoding of the string.
      *
      * @param plist_id
@@ -10001,12 +10892,14 @@ public class H5 implements java.io.Serializable {
      * @return Returns the character encoding of the string.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pget_char_encoding(long plist_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_char_encoding sets the character encoding of the string.
      *
      * @param plist_id
@@ -10015,7 +10908,7 @@ public class H5 implements java.io.Serializable {
      *            IN: the character encoding of the string
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native void H5Pset_char_encoding(long plist_id, int encoding)
@@ -10024,6 +10917,8 @@ public class H5 implements java.io.Serializable {
     // /////// Link access property list (LAPL) routines ///////
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_nlinks retrieves the maximum number of soft or user-defined link traversals allowed, nlinks,
      * before the library assumes it has found a cycle and aborts the traversal. This value is retrieved from
      * the link access property list lapl_id.
@@ -10034,12 +10929,14 @@ public class H5 implements java.io.Serializable {
      * @return Returns a Maximum number of links to traverse.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native long H5Pget_nlinks(long lapl_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_nlinks sets the maximum number of soft or user-defined link traversals allowed, nlinks, before
      * the library assumes it has found a cycle and aborts the traversal. This value is set in the link access
      * property list lapl_id.
@@ -10052,7 +10949,7 @@ public class H5 implements java.io.Serializable {
      * @return Returns a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception IllegalArgumentException
      *            Argument is Illegal
      *
@@ -10061,6 +10958,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_elink_prefix Retrieves prefix applied to external link paths.
      *
      * @param lapl_id
@@ -10072,7 +10971,7 @@ public class H5 implements java.io.Serializable {
      *         the NULL terminator; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            prefix is null.
      *
@@ -10081,6 +10980,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_elink_prefix Sets prefix to be applied to external link paths.
      *
      * @param lapl_id
@@ -10091,7 +10992,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            prefix is null.
      *
@@ -10100,6 +11001,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_elink_fapl Retrieves the file access property list identifier associated with the link access
      * property list.
      *
@@ -10109,7 +11012,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public static long H5Pget_elink_fapl(long lapl_id) throws HDF5LibraryException
@@ -10126,6 +11029,8 @@ public class H5 implements java.io.Serializable {
     private synchronized static native long _H5Pget_elink_fapl(long lapl_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_elink_fapl sets a file access property list for use in accessing a file pointed to by an
      * external link.
      *
@@ -10137,13 +11042,15 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pset_elink_fapl(long lapl_id, long fapl_id)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_elink_acc_flags retrieves the external link traversal file access flag from the specified link
      * access property list.
      *
@@ -10153,12 +11060,14 @@ public class H5 implements java.io.Serializable {
      * @return File access flag for link traversal.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pget_elink_acc_flags(long lapl_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_elink_acc_flags Sets the external link traversal file access flag in a link access property
      * list.
      *
@@ -10170,7 +11079,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception IllegalArgumentException
      *            Invalid Flag values.
      *
@@ -10181,6 +11090,8 @@ public class H5 implements java.io.Serializable {
     // /////// Object copy property list (OCPYPL) routines ///////
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_copy_object retrieves the properties to be used when an object is copied.
      *
      * @param ocp_plist_id
@@ -10189,12 +11100,14 @@ public class H5 implements java.io.Serializable {
      * @return Copy option(s) set in the object copy property list
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pget_copy_object(long ocp_plist_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_copy_object Sets properties to be used when an object is copied.
      *
      * @param ocp_plist_id
@@ -10203,13 +11116,15 @@ public class H5 implements java.io.Serializable {
      *            IN: Copy option(s) to be set
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native void H5Pset_copy_object(long ocp_plist_id, int copy_options)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_version retrieves the version information of various objects for a file creation property list.
      *
      * @param plist
@@ -10226,7 +11141,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value, with the values of version_info initialized, if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            version_info is null.
      * @exception IllegalArgumentException
@@ -10241,6 +11156,8 @@ public class H5 implements java.io.Serializable {
     // /////// file drivers property list routines ///////
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_fapl_core retrieve H5FD_CORE I/O settings.
      *
      * @param fapl_id
@@ -10251,7 +11168,7 @@ public class H5 implements java.io.Serializable {
      *            OUT: write to file name on flush setting
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native void H5Pget_fapl_core(long fapl_id, long[] increment,
@@ -10259,6 +11176,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_fapl_core modifies the file access property list to use the H5FD_CORE driver.
      *
      * @param fapl_id
@@ -10271,7 +11190,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pset_fapl_core(long fapl_id, long increment,
@@ -10279,6 +11198,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_fapl_direct queries properties set by the H5Pset_fapl_direct.
      *
      * @param fapl_id
@@ -10291,13 +11212,15 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pget_fapl_direct(long fapl_id, long[] info)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_fapl_direct Sets up use of the direct I/O driver.
      *
      * @param fapl_id
@@ -10312,13 +11235,15 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pset_fapl_direct(long fapl_id, long alignment, long block_size,
                                                              long cbuf_size) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_fapl_family Returns information about the family file access property list.
      *
      * @param fapl_id
@@ -10331,7 +11256,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pget_fapl_family(long fapl_id, long[] memb_size,
@@ -10339,6 +11264,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_fapl_family Sets up use of the direct I/O driver.
      *
      * @param fapl_id
@@ -10351,13 +11278,15 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pset_fapl_family(long fapl_id, long memb_size, long memb_fapl_id)
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_fapl_hdfs Modify the file access property list to use the H5FD_HDFS driver.
      *
      * @param fapl_id
@@ -10368,13 +11297,15 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pset_fapl_hdfs(long fapl_id, H5FD_hdfs_fapl_t fapl_conf)
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_fapl_hdfs gets the properties hdfs I/O driver.
      *
      * @param fapl_id
@@ -10383,13 +11314,15 @@ public class H5 implements java.io.Serializable {
      * @return the properties of the hdfs driver.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native H5FD_hdfs_fapl_t H5Pget_fapl_hdfs(long fapl_id)
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_fapl_multi Sets up use of the multi I/O driver.
      *
      * @param fapl_id
@@ -10407,7 +11340,7 @@ public class H5 implements java.io.Serializable {
      * @return a boolean value; Allows read-only access to incomplete file sets when TRUE.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            an array is null.
      *
@@ -10418,6 +11351,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_fapl_multi Sets up use of the multi I/O driver.
      *
      * @param fapl_id
@@ -10435,7 +11370,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Allows read-only access to incomplete file sets when TRUE.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            an array is null.
      *
@@ -10446,6 +11381,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_fapl_log Sets up the logging virtual file driver (H5FD_LOG) for use. H5Pset_fapl_log modifies
      * the file access property list to use the logging driver, H5FD_LOG. The logging virtual file driver
      * (VFD) is a clone of the standard SEC2 (H5FD_SEC2) driver with additional facilities for logging VFD
@@ -10461,7 +11398,7 @@ public class H5 implements java.io.Serializable {
      *            IN: The size of the logging buffers, in bytes.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            logfile is null.
      **/
@@ -10470,6 +11407,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_fapl_sec2 Sets up use of the sec2 I/O driver.
      *
      * @param fapl_id
@@ -10478,13 +11417,15 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pset_fapl_sec2(long fapl_id)
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_fapl_split Sets up use of the split I/O driver. Makes the multi driver act like the
      *        old split driver which stored meta data in one file and raw
      *        data in another file
@@ -10501,7 +11442,7 @@ public class H5 implements java.io.Serializable {
      *            IN: File access property list identifier raw data
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native void
@@ -10509,6 +11450,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_fapl_stdio Sets up use of the stdio I/O driver.
      *
      * @param fapl_id
@@ -10517,13 +11460,15 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pset_fapl_stdio(long fapl_id)
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_fapl_windows Sets up use of the windows I/O driver.
      *
      * @param fapl_id
@@ -10532,13 +11477,15 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pset_fapl_windows(long fapl_id)
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_fapl_ros3 Modify the file access property list to use the H5FD_ROS3 driver.
      *
      * @param fapl_id
@@ -10549,13 +11496,15 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pset_fapl_ros3(long fapl_id, H5FD_ros3_fapl_t fapl_conf)
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_fapl_ros3 gets the properties of the ros3 I/O driver.
      *
      * @param fapl_id
@@ -10564,7 +11513,7 @@ public class H5 implements java.io.Serializable {
      * @return the properties of the ros3 driver.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native H5FD_ros3_fapl_t H5Pget_fapl_ros3(long fapl_id)
@@ -10652,6 +11601,12 @@ public class H5 implements java.io.Serializable {
     // //
     // ////////////////////////////////////////////////////////////
     /**
+     * @defgroup JH5PL Java Plugin (H5PL) Interface
+     **/
+
+    /**
+     * @ingroup JH5PL
+     *
      * H5PLset_loading_state uses one argument to enable or disable individual plugins.
      *        The plugin_flags parameter is an encoded integer in which each bit controls a specific
      *        plugin or class of plugins.
@@ -10673,12 +11628,14 @@ public class H5 implements java.io.Serializable {
      *
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5PLset_loading_state(int plugin_flags)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5PL
+     *
      * H5PLget_loading_state retrieves the state of the dynamic plugins flag, plugin_flags..
      *
      * @return the list of dynamic plugin types that are enabled or disabled.
@@ -10688,33 +11645,39 @@ public class H5 implements java.io.Serializable {
      *             If the value of plugin_flags is 0 (zero), all dynamic plugins are disabled.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5PLget_loading_state() throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5PL
+     *
      * H5PLappend inserts the plugin path at the end of the table.
      *
      * @param plugin_path
      *            IN: Path for location of filter plugin libraries.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5PLappend(String plugin_path) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5PL
+     *
      * H5PLprepend inserts the plugin path at the beginning of the table.
      *
      * @param plugin_path
      *            IN: Path for location of filter plugin libraries.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5PLprepend(String plugin_path) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5PL
+     *
      * H5PLreplace replaces the plugin path at the specified index.
      *
      * @param plugin_path
@@ -10723,12 +11686,14 @@ public class H5 implements java.io.Serializable {
      *            IN: The table index (0-based).
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5PLreplace(String plugin_path, int index)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5PL
+     *
      * H5PLinsert inserts the plugin path at the specified index.
      *
      * @param plugin_path
@@ -10737,23 +11702,27 @@ public class H5 implements java.io.Serializable {
      *            IN: The table index (0-based).
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5PLinsert(String plugin_path, int index)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5PL
+     *
      * H5PLremove removes the plugin path at the specified index.
      *
      * @param index
      *            IN: The table index (0-based).
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5PLremove(int index) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5PL
+     *
      * H5PLget retrieves the plugin path at the specified index.
      *
      * @param index
@@ -10762,17 +11731,19 @@ public class H5 implements java.io.Serializable {
      * @return the current path at the index in plugin path table
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native String H5PLget(int index) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5PL
+     *
      * H5PLsize retrieves the size of the current list of plugin paths.
      *
      * @return the current number of paths in the plugin path table
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5PLsize() throws HDF5LibraryException;
 
@@ -10782,11 +11753,17 @@ public class H5 implements java.io.Serializable {
     // //
     // ////////////////////////////////////////////////////////////
 
+    /**
+     * @defgroup JH5R Java Reference (H5R) Interface
+     **/
+
     private synchronized static native int H5Rcreate(byte[] ref, long loc_id, String name, int ref_type,
                                                      long space_id)
         throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5R
+     *
      * H5Rcreate creates the reference, ref, of the type specified in ref_type, pointing to the object name
      * located at loc_id.
      *
@@ -10802,7 +11779,7 @@ public class H5 implements java.io.Serializable {
      * @return the reference (byte[]) if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            an input array is null.
      * @exception IllegalArgumentException
@@ -10825,6 +11802,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5R
+     *
      * Given a reference to some object, H5Rdereference opens that object and return an identifier.
      *
      * @param dataset
@@ -10839,7 +11818,7 @@ public class H5 implements java.io.Serializable {
      * @return valid identifier if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            output array is null.
      * @exception IllegalArgumentException
@@ -10862,6 +11841,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5R
+     *
      * H5Rget_name retrieves a name for the object identified by ref.
      *
      * @param loc_id
@@ -10879,7 +11860,7 @@ public class H5 implements java.io.Serializable {
      *         the identifier. Otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            size is null.
      * @exception IllegalArgumentException
@@ -10890,6 +11871,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5R
+     *
      * H5Rget_name_string retrieves a name for the object identified by ref.
      *
      * @param loc_id
@@ -10903,7 +11886,7 @@ public class H5 implements java.io.Serializable {
      *         the identifier.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            size is null.
      * @exception IllegalArgumentException
@@ -10913,6 +11896,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5R
+     *
      * H5Rget_obj_type Given a reference to an object ref, H5Rget_obj_type returns the type of the object
      * pointed to.
      *
@@ -10926,7 +11911,7 @@ public class H5 implements java.io.Serializable {
      * @return Returns the object type
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            an input array is null.
      * @exception IllegalArgumentException
@@ -10936,6 +11921,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5R
+     *
      * H5Rget_obj_type2 Retrieves the type of object that an object reference points to.
      *
      * @see public static int H5Rget_obj_type(int loc_id, int ref_type, byte ref[])
@@ -10945,6 +11932,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5R
+     *
      * Given a reference to an object ref, H5Rget_region creates a copy of the dataspace of the dataset
      * pointed to and defines a selection in the copy which is the region pointed to.
      *
@@ -10958,7 +11947,7 @@ public class H5 implements java.io.Serializable {
      * @return a valid identifier if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            an input array is null.
      * @exception IllegalArgumentException
@@ -10984,10 +11973,15 @@ public class H5 implements java.io.Serializable {
     // H5S: Dataspace Interface Functions //
     // //
     // ////////////////////////////////////////////////////////////
+    /**
+     * @defgroup JH5S Java Dataspace (H5S) Interface
+     **/
 
     /**************** Operations on dataspaces ********************/
 
     /**
+     * @ingroup JH5S
+     *
      * H5Screate creates a new dataspace of a particular type.
      *
      * @param type
@@ -10996,7 +11990,7 @@ public class H5 implements java.io.Serializable {
      * @return a dataspace identifier
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static long H5Screate(int type) throws HDF5LibraryException
     {
@@ -11012,6 +12006,8 @@ public class H5 implements java.io.Serializable {
     private synchronized static native long _H5Screate(int type) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Screate_simple creates a new simple data space and opens it for access.
      *
      * @param rank
@@ -11024,7 +12020,7 @@ public class H5 implements java.io.Serializable {
      * @return a dataspace identifier
      *
      * @exception HDF5Exception
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            dims or maxdims is null.
      **/
@@ -11044,6 +12040,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5Exception, NullPointerException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sset_extent_simple sets or resets the size of an existing dataspace.
      *
      * @param space_id
@@ -11058,13 +12056,15 @@ public class H5 implements java.io.Serializable {
      * @return a dataspace identifier if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native long H5Sset_extent_simple(long space_id, int rank, long[] current_size,
                                                                 long[] maximum_size)
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sset_extent_simple sets or resets the size of an existing dataspace.
      *
      * @param space_id
@@ -11079,7 +12079,7 @@ public class H5 implements java.io.Serializable {
      * @return a dataspace identifier if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static long H5Sset_extent_simple(long space_id, int rank, byte[] current_size,
                                                          byte[] maximum_size)
@@ -11094,6 +12094,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5S
+     *
      * H5Scopy creates a new dataspace which is an exact copy of the dataspace identified by space_id.
      *
      * @param space_id
@@ -11101,7 +12103,7 @@ public class H5 implements java.io.Serializable {
      * @return a dataspace identifier if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static long H5Scopy(long space_id) throws HDF5LibraryException
     {
@@ -11117,6 +12119,8 @@ public class H5 implements java.io.Serializable {
     private synchronized static native long _H5Scopy(long space_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sclose releases a dataspace.
      *
      * @param space_id
@@ -11125,7 +12129,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static int H5Sclose(long space_id) throws HDF5LibraryException
     {
@@ -11141,6 +12145,8 @@ public class H5 implements java.io.Serializable {
     private synchronized static native int _H5Sclose(long space_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sencode converts a data space description into binary form in a buffer.
      *
      * @param obj_id
@@ -11149,12 +12155,14 @@ public class H5 implements java.io.Serializable {
      * @return the buffer for the object to be encoded into.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native byte[] H5Sencode(long obj_id)
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sdecode reconstructs the HDF5 data space object and returns a new object handle for it.
      *
      * @param buf
@@ -11163,7 +12171,7 @@ public class H5 implements java.io.Serializable {
      * @return a new object handle
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            buf is null.
      **/
@@ -11171,6 +12179,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sget_simple_extent_npoints determines the number of elements in a dataspace.
      *
      * @param space_id
@@ -11179,12 +12189,14 @@ public class H5 implements java.io.Serializable {
      * @return the number of elements in the dataspace if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native long H5Sget_simple_extent_npoints(long space_id)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sget_simple_extent_ndims determines the dimensionality (or rank) of a dataspace.
      *
      * @param space_id
@@ -11193,12 +12205,14 @@ public class H5 implements java.io.Serializable {
      * @return the number of dimensions in the dataspace if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Sget_simple_extent_ndims(long space_id)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sget_simple_extent_dims returns the size and maximum sizes of each dimension of a dataspace through
      * the dims and maxdims parameters.
      *
@@ -11212,7 +12226,7 @@ public class H5 implements java.io.Serializable {
      * @return the number of dimensions in the dataspace if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            dims or maxdims is null.
      **/
@@ -11221,6 +12235,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sis_simple determines whether a dataspace is a simple dataspace.
      *
      * @param space_id
@@ -11229,11 +12245,13 @@ public class H5 implements java.io.Serializable {
      * @return true if is a simple dataspace
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native boolean H5Sis_simple(long space_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sget_simple_extent_type queries a dataspace to determine the current class of a dataspace.
      *
      * @param space_id
@@ -11242,12 +12260,14 @@ public class H5 implements java.io.Serializable {
      * @return a dataspace class name if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Sget_simple_extent_type(long space_id)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sset_extent_none removes the extent from a dataspace and sets the type to H5S_NONE.
      *
      * @param space_id
@@ -11256,11 +12276,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Sset_extent_none(long space_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sextent_copy copies the extent from source_space_id to dest_space_id. This action may change the type
      * of the dataspace.
      *
@@ -11272,12 +12294,14 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Sextent_copy(long dest_space_id, long source_space_id)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sextent_equal determines whether the dataspace extents of two dataspaces, space1_id and space2_id,
      * are equal.
      *
@@ -11289,7 +12313,7 @@ public class H5 implements java.io.Serializable {
      * @return true if successful, else false
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native boolean H5Sextent_equal(long first_space_id, long second_space_id)
         throws HDF5LibraryException;
@@ -11297,6 +12321,8 @@ public class H5 implements java.io.Serializable {
     /***************** Operations on dataspace selections *****************/
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sget_select_type retrieves the type of selection currently defined for the dataspace space_id.
      *
      * @param space_id
@@ -11305,11 +12331,13 @@ public class H5 implements java.io.Serializable {
      * @return the dataspace selection type if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Sget_select_type(long space_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sget_select_npoints determines the number of elements in the current selection of a dataspace.
      *
      * @param space_id
@@ -11318,11 +12346,13 @@ public class H5 implements java.io.Serializable {
      * @return the number of elements in the selection if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native long H5Sget_select_npoints(long space_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sselect_copy copies all the selection information (including offset) from the source
      * dataspace to the destination dataspace.
      *
@@ -11332,12 +12362,14 @@ public class H5 implements java.io.Serializable {
      *            ID of the source dataspace
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Sselect_copy(long dst_id, long src_id)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sselect_valid verifies that the selection for the dataspace.
      *
      * @param space_id
@@ -11346,11 +12378,13 @@ public class H5 implements java.io.Serializable {
      * @return true if the selection is contained within the extent and FALSE if it is not or is an error.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native boolean H5Sselect_valid(long space_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sselect_adjust moves a selection by subtracting an offset from it.
      *
      * @param space_id
@@ -11359,7 +12393,7 @@ public class H5 implements java.io.Serializable {
      *            Offset to subtract
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            offset is null.
      **/
@@ -11367,8 +12401,10 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sget_select_bounds retrieves the coordinates of the bounding box containing the current selection and
-     * places them into user-supplied buffers. <P> The start and end buffers must be large enough to hold the
+     * places them into user-supplied buffers. <p> The start and end buffers must be large enough to hold the
      * dataspace rank number of coordinates.
      *
      * @param space_id
@@ -11381,7 +12417,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful,with start and end initialized.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            start or end is null.
      **/
@@ -11389,6 +12425,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sselect_shape_same checks to see if the current selection in the dataspaces are the same
      * dimensionality and shape.
      * This is primarily used for reading the entire selection in one swoop.
@@ -11402,12 +12440,14 @@ public class H5 implements java.io.Serializable {
      *         false otherwise
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native boolean H5Sselect_shape_same(long space1_id, long space2_id)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sselect_intersect_block checks to see if the current selection in the
      * dataspace intersects with the block given.
      *
@@ -11422,7 +12462,7 @@ public class H5 implements java.io.Serializable {
      *           FALSE otherwise
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            offset is null.
      **/
@@ -11431,6 +12471,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Soffset_simple sets the offset of a simple dataspace space_id.
      *
      * @param space_id
@@ -11441,7 +12483,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            offset array is null.
      **/
@@ -11449,6 +12491,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Soffset_simple sets the offset of a simple dataspace space_id.
      *
      * @param space_id
@@ -11459,7 +12503,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            offset array is null.
      **/
@@ -11480,6 +12524,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sselect_all selects the entire extent of the dataspace space_id.
      *
      * @param space_id
@@ -11488,11 +12534,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Sselect_all(long space_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sselect_none resets the selection region for the dataspace space_id to include no elements.
      *
      * @param space_id
@@ -11501,11 +12549,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Sselect_none(long space_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sselect_elements selects array elements to be included in the selection for the space_id dataspace.
      *
      * @param space_id
@@ -11520,13 +12570,15 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     private synchronized static native int H5Sselect_elements(long space_id, int op, int num_elements,
                                                               byte[] coord)
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sselect_elements selects array elements to be included in the selection for the space_id dataspace.
      *
      * @param space_id
@@ -11543,7 +12595,7 @@ public class H5 implements java.io.Serializable {
      * @exception HDF5Exception
      *            Error in the data conversion
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            cord array is
      **/
@@ -11565,6 +12617,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sget_select_elem_npoints returns the number of element points in the current dataspace selection.
      *
      * @param spaceid
@@ -11573,12 +12627,14 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native long H5Sget_select_elem_npoints(long spaceid)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sget_select_elem_pointlist returns an array of of element points in the current dataspace selection.
      * The point coordinates have the same dimensionality (rank) as the dataspace they are located within, one
      * coordinate per point.
@@ -11595,7 +12651,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            buf is null.
      **/
@@ -11604,6 +12660,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sselect_hyperslab selects a hyperslab region to add to the current selected region for the dataspace
      * specified by space_id. The start, stride, count, and block arrays must be the same size as the rank of
      * the dataspace.
@@ -11624,7 +12682,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            an input array is null.
      * @exception IllegalArgumentException
@@ -11647,6 +12705,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sselect_hyperslab selects a hyperslab region to add to the current selected region for the dataspace
      * specified by space_id. The start, stride, count, and block arrays must be the same size as the rank of
      * the dataspace.
@@ -11667,7 +12727,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            an input array is null.
      * @exception IllegalArgumentException
@@ -11678,6 +12738,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Scombine_hyperslab combines a hyperslab selection with the current selection for a dataspace,
      * creating a new dataspace to return the generated selection.
      * If the current selection is not a hyperslab, it is freed and the hyperslab
@@ -11701,7 +12763,7 @@ public class H5 implements java.io.Serializable {
      * @return a dataspace ID on success / H5I_INVALID_HID on failure
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            an input array is null.
      * @exception IllegalArgumentException
@@ -11712,6 +12774,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Smodify_select refine an existing hyperslab selection with an operation, using a second
      * hyperslab. The first selection is modified to contain the result of
      * space1 operated on by space2.
@@ -11724,12 +12788,14 @@ public class H5 implements java.io.Serializable {
      *            ID of the source dataspace
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Smodify_select(long space1_id, int op, long space2_id)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Scombine_select combines two existing hyperslab selections with an operation, returning
      * a new dataspace with the resulting selection.  The dataspace extent from
      * space1 is copied for the dataspace extent of the newly created dataspace.
@@ -11744,12 +12810,14 @@ public class H5 implements java.io.Serializable {
      * @return a dataspace ID on success / H5I_INVALID_HID on failure
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native long H5Scombine_select(long space1_id, int op, long space2_id)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sis_regular_hyperslab retrieves a regular hyperslab selection for the dataspace specified
      * by space_id.
      *
@@ -11759,12 +12827,14 @@ public class H5 implements java.io.Serializable {
      * @return a TRUE/FALSE for hyperslab selection if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native boolean H5Sis_regular_hyperslab(long space_id)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sget_regular_hyperslab determines if a hyperslab selection is regular for the dataspace specified
      * by space_id. The start, stride, count, and block arrays must be the same size as the rank of the
      * dataspace.
@@ -11781,7 +12851,7 @@ public class H5 implements java.io.Serializable {
      *            OUT: Size of block in hyperslab.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            an output array is null.
      * @exception IllegalArgumentException
@@ -11792,6 +12862,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sget_select_hyper_nblocks returns the number of hyperslab blocks in the current dataspace selection.
      *
      * @param spaceid
@@ -11800,12 +12872,14 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native long H5Sget_select_hyper_nblocks(long spaceid)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sget_select_hyper_blocklist returns an array of hyperslab blocks. The block coordinates have the same
      * dimensionality (rank) as the dataspace they are located within. The list of blocks is formatted as
      * follows:
@@ -11831,7 +12905,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            buf is null.
      **/
@@ -11840,6 +12914,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sselect_project_intersection projects the intersection of the selections of src_space_id and
      * src_intersect_space_id within the selection of src_space_id as a
      * selection within the selection of dst_space_id.
@@ -11856,7 +12932,7 @@ public class H5 implements java.io.Serializable {
      *         src_intersect_space_id and src_space_id projected from src_space to dst_space on success
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native long
     H5Sselect_project_intersection(long src_space_id, long dst_space_id, long src_intersect_space_id)
@@ -11867,8 +12943,13 @@ public class H5 implements java.io.Serializable {
     // H5T: Datatype Interface Functions //
     // //
     // ////////////////////////////////////////////////////////////
+    /**
+     * @defgroup JH5T Java Datatype (H5T) Interface
+     **/
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tarray_create creates a new array datatype object.
      *
      * @param base_id
@@ -11881,7 +12962,7 @@ public class H5 implements java.io.Serializable {
      * @return a valid datatype identifier
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            dim is null.
      **/
@@ -11901,6 +12982,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tclose releases a datatype.
      *
      * @param type_id
@@ -11909,7 +12992,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static int H5Tclose(long type_id) throws HDF5LibraryException
     {
@@ -11925,6 +13008,8 @@ public class H5 implements java.io.Serializable {
     private synchronized static native int _H5Tclose(long type_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tcommit saves a transient datatype as an immutable named datatype in a file.
      *
      * @param loc_id
@@ -11941,7 +13026,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Datatype access property list.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -11950,6 +13035,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tcommit_anon commits a transient datatype (not immutable) to a file, turning it into a named datatype
      * with the specified creation and property lists.
      *
@@ -11963,12 +13050,14 @@ public class H5 implements java.io.Serializable {
      *            IN: Datatype access property list.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Tcommit_anon(long loc_id, long type_id, long tcpl_id,
                                                           long tapl_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tcommitted queries a type to determine whether the type specified by the type identifier is a named
      * type or a transient type.
      *
@@ -11978,13 +13067,15 @@ public class H5 implements java.io.Serializable {
      * @return true the datatype has been committed
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native boolean H5Tcommitted(long type_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tcompiler_conv finds out whether the library's conversion function from type src_id to type dst_id is
-     *a compiler (hard) conversion.
+     * a compiler (hard) conversion.
      *
      * @param src_id
      *            IN: Identifier of source datatype.
@@ -11992,12 +13083,14 @@ public class H5 implements java.io.Serializable {
      *            IN: Identifier of destination datatype.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Tcompiler_conv(long src_id, long dst_id)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tconvert converts nelmts elements from the type specified by the src_id identifier to type dst_id.
      *
      * @param src_id
@@ -12014,7 +13107,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Dataset transfer property list identifier.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            buf is null.
      **/
@@ -12025,6 +13118,8 @@ public class H5 implements java.io.Serializable {
     // int H5Tconvert(int src_id, int dst_id, long nelmts, Pointer buf, Pointer background, int plist_id);
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tcopy copies an existing datatype. The returned type is always transient and unlocked.
      *
      * @param type_id
@@ -12034,7 +13129,7 @@ public class H5 implements java.io.Serializable {
      * @return a datatype identifier if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static long H5Tcopy(long type_id) throws HDF5LibraryException
     {
@@ -12050,6 +13145,8 @@ public class H5 implements java.io.Serializable {
     private synchronized static native long _H5Tcopy(long type_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tcreate creates a new dataype of the specified class with the specified number of bytes.
      *
      * @param tclass
@@ -12060,7 +13157,7 @@ public class H5 implements java.io.Serializable {
      * @return datatype identifier
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static long H5Tcreate(int tclass, long size) throws HDF5LibraryException
     {
@@ -12076,6 +13173,8 @@ public class H5 implements java.io.Serializable {
     private synchronized static native long _H5Tcreate(int type, long size) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tdecode reconstructs the HDF5 data type object and returns a new object handle for it.
      *
      * @param buf
@@ -12084,7 +13183,7 @@ public class H5 implements java.io.Serializable {
      * @return a new object handle
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            buf is null.
      **/
@@ -12103,6 +13202,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tdetect_class determines whether the datatype specified in dtype_id contains any datatypes of the
      * datatype class specified in dtype_class.
      *
@@ -12114,12 +13215,14 @@ public class H5 implements java.io.Serializable {
      * @return true if the datatype specified in dtype_id contains any datatypes of the datatype class
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native boolean H5Tdetect_class(long type_id, int cls)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tencode converts a data type description into binary form in a buffer.
      *
      * @param obj_id
@@ -12133,7 +13236,7 @@ public class H5 implements java.io.Serializable {
      * @return the size needed for the allocated buffer.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            buf is null.
      **/
@@ -12141,20 +13244,24 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     // /**
-    // * H5Tencode converts a data type description into binary form in a buffer.
-    // *
-    // * @param obj_id
-    // *            IN: Identifier of the object to be encoded.
-    // *
-    // * @return the buffer for the object to be encoded into.
-    // *
-    // * @exception HDF5LibraryException
-    // *            Error from the HDF-5 Library.
-    // **/
+    //  * @ingroup JH5T
+    //  *
+    //  * H5Tencode converts a data type description into binary form in a buffer.
+    //  *
+    //  * @param obj_id
+    //  *            IN: Identifier of the object to be encoded.
+    //  *
+    //  * @return the buffer for the object to be encoded into.
+    //  *
+    //  * @exception HDF5LibraryException
+    //  *            Error from the HDF5 Library.
+    //  **/
     // public synchronized static native byte[] H5Tencode(int obj_id)
     //     throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tenum_create creates a new enumeration datatype based on the specified base datatype, parent_id,
      * which must be an integer type.
      *
@@ -12164,7 +13271,7 @@ public class H5 implements java.io.Serializable {
      * @return the datatype identifier for the new enumeration datatype
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static long H5Tenum_create(long base_id) throws HDF5LibraryException
     {
@@ -12180,6 +13287,8 @@ public class H5 implements java.io.Serializable {
     private synchronized static native long _H5Tenum_create(long base_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tenum_insert inserts a new enumeration datatype member into an enumeration datatype.
      *
      * @param type
@@ -12190,7 +13299,7 @@ public class H5 implements java.io.Serializable {
      *            IN: The value of the member, data of the correct type
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -12198,6 +13307,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tenum_insert inserts a new enumeration datatype member into an enumeration datatype.
      *
      * @param type
@@ -12210,7 +13321,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -12221,6 +13332,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tenum_insert inserts a new enumeration datatype member into an enumeration datatype.
      *
      * @param type
@@ -12233,7 +13346,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -12248,6 +13361,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tenum_nameof finds the symbol name that corresponds to the specified value of the enumeration
      * datatype type.
      *
@@ -12261,7 +13376,7 @@ public class H5 implements java.io.Serializable {
      * @return the symbol name.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            value is null.
      **/
@@ -12271,6 +13386,8 @@ public class H5 implements java.io.Serializable {
     // int H5Tenum_nameof(int type, Pointer value, Buffer name/* out */, long size);
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tenum_nameof finds the symbol name that corresponds to the specified value of the enumeration
      * datatype type.
      *
@@ -12286,7 +13403,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -12300,6 +13417,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tenum_valueof finds the value that corresponds to the specified name of the enumeration datatype
      * type.
      *
@@ -12311,12 +13430,14 @@ public class H5 implements java.io.Serializable {
      *            OUT: The value of the member
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Tenum_valueof(long type, String name, byte[] value)
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tenum_valueof finds the value that corresponds to the specified name of the enumeration datatype
      * type.
      *
@@ -12330,7 +13451,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -12344,6 +13465,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tequal determines whether two datatype identifiers refer to the same datatype.
      *
      * @param type_id1
@@ -12354,12 +13477,14 @@ public class H5 implements java.io.Serializable {
      * @return true if the datatype identifiers refer to the same datatype, else false.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native boolean H5Tequal(long type_id1, long type_id2)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_array_dims returns the sizes of the dimensions of the specified array datatype object.
      *
      * @param type_id
@@ -12370,7 +13495,7 @@ public class H5 implements java.io.Serializable {
      * @return the non-negative number of dimensions of the array type
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            dims is null.
      **/
@@ -12381,6 +13506,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_array_dims2 returns the sizes of the dimensions of the specified array datatype object.
      *
      * @param type_id
@@ -12391,7 +13518,7 @@ public class H5 implements java.io.Serializable {
      * @return the non-negative number of dimensions of the array type
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            dims is null.
      **/
@@ -12399,6 +13526,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_array_ndims returns the rank, the number of dimensions, of an array datatype object.
      *
      * @param type_id
@@ -12407,11 +13536,13 @@ public class H5 implements java.io.Serializable {
      * @return the rank of the array
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Tget_array_ndims(long type_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_class returns the datatype class identifier.
      *
      * @param type_id
@@ -12420,11 +13551,13 @@ public class H5 implements java.io.Serializable {
      * @return datatype class identifier if successful; otherwise H5T_NO_CLASS(-1).
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Tget_class(long type_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_class_name returns the datatype class identifier.
      *
      * @param class_id
@@ -12465,6 +13598,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_create_plist returns a property list identifier for the datatype creation property list
      * associated with the datatype specified by type_id.
      *
@@ -12474,7 +13609,7 @@ public class H5 implements java.io.Serializable {
      * @return a datatype property list identifier.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static long H5Tget_create_plist(long type_id) throws HDF5LibraryException
     {
@@ -12490,6 +13625,8 @@ public class H5 implements java.io.Serializable {
     private synchronized static native long _H5Tget_create_plist(long type_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_cset retrieves the character set type of a string datatype.
      *
      * @param type_id
@@ -12498,11 +13635,13 @@ public class H5 implements java.io.Serializable {
      * @return a valid character set type if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Tget_cset(long type_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tset_cset the character set to be used.
      *
      * @param type_id
@@ -12513,11 +13652,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Tset_cset(long type_id, int cset) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_ebias retrieves the exponent bias of a floating-point type.
      *
      * @param type_id
@@ -12526,11 +13667,13 @@ public class H5 implements java.io.Serializable {
      * @return the bias if successful; otherwise 0.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Tget_ebias(long type_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tset_ebias sets the exponent bias of a floating-point type.
      *
      * @param type_id
@@ -12541,7 +13684,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static int H5Tset_ebias(long type_id, int ebias) throws HDF5LibraryException
     {
@@ -12550,6 +13693,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_ebias retrieves the exponent bias of a floating-point type.
      *
      * @param type_id
@@ -12558,11 +13703,13 @@ public class H5 implements java.io.Serializable {
      * @return the bias
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native long H5Tget_ebias_long(long type_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tset_ebias sets the exponent bias of a floating-point type.
      *
      * @param type_id
@@ -12571,11 +13718,13 @@ public class H5 implements java.io.Serializable {
      *            IN: Exponent bias value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Tset_ebias(long type_id, long ebias) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_fields retrieves information about the locations of the various bit fields of a floating point
      * datatype.
      *
@@ -12592,7 +13741,7 @@ public class H5 implements java.io.Serializable {
      *            </ul>
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            fields is null.
      * @exception IllegalArgumentException
@@ -12602,6 +13751,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_fields retrieves information about the locations of the various bit fields of a floating point
      * datatype.
      *
@@ -12621,7 +13772,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            fields is null.
      * @exception IllegalArgumentException
@@ -12637,6 +13788,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tset_fields sets the locations and sizes of the various floating point bit fields.
      *
      * @param type_id
@@ -12653,12 +13806,14 @@ public class H5 implements java.io.Serializable {
      *            IN: Size of mantissa in bits.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Tset_fields(long type_id, long spos, long epos, long esize,
                                                          long mpos, long msize) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tset_fields sets the locations and sizes of the various floating point bit fields.
      *
      * @param type_id
@@ -12677,7 +13832,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static int H5Tset_fields(long type_id, int spos, int epos, int esize, int mpos, int msize)
         throws HDF5LibraryException
@@ -12687,6 +13842,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_inpad retrieves the internal padding type for unused bits in floating-point datatypes.
      *
      * @param type_id
@@ -12695,11 +13852,13 @@ public class H5 implements java.io.Serializable {
      * @return a valid padding type if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Tget_inpad(long type_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * If any internal bits of a floating point type are unused (that is, those significant bits which are not
      * part of the sign, exponent, or mantissa), then H5Tset_inpad will be filled according to the value of
      * the padding value property inpad.
@@ -12712,11 +13871,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *             Error from the HDF-5 Library.
+     *             Error from the HDF5 Library.
      **/
     public synchronized static native int H5Tset_inpad(long type_id, int inpad) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_member_class returns the class of datatype of the specified member.
      *
      * @param type_id
@@ -12727,12 +13888,14 @@ public class H5 implements java.io.Serializable {
      * @return the class of the datatype of the field if successful;
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Tget_member_class(long type_id, int membno)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_member_index retrieves the index of a field of a compound datatype.
      *
      * @param type_id
@@ -12743,12 +13906,14 @@ public class H5 implements java.io.Serializable {
      * @return if field is defined, the index; else negative.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Tget_member_index(long type_id, String field_name)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_member_name retrieves the name of a field of a compound datatype or an element of an enumeration
      * datatype.
      *
@@ -12760,14 +13925,16 @@ public class H5 implements java.io.Serializable {
      * @return a valid pointer to the name if successful; otherwise null.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native String H5Tget_member_name(long type_id, int field_idx)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_member_offset returns the byte offset of the specified member of the compound datatype. This is
-     * the byte offset in the HDF-5 file/library, NOT the offset of any Java object which might be mapped to
+     * the byte offset in the HDF5 file/library, NOT the offset of any Java object which might be mapped to
      * this data item.
      *
      * @param type_id
@@ -12780,6 +13947,8 @@ public class H5 implements java.io.Serializable {
     public synchronized static native long H5Tget_member_offset(long type_id, int membno);
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_member_type returns the datatype of the specified member.
      *
      * @param type_id
@@ -12790,7 +13959,7 @@ public class H5 implements java.io.Serializable {
      * @return the identifier of a copy of the datatype of the field if successful;
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static long H5Tget_member_type(long type_id, int field_idx) throws HDF5LibraryException
     {
@@ -12807,6 +13976,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_member_value returns the value of the enumeration datatype member memb_no.
      *
      * @param type_id
@@ -12817,7 +13988,7 @@ public class H5 implements java.io.Serializable {
      *            OUT: The value of the member
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            value is null.
      **/
@@ -12825,6 +13996,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_member_value returns the value of the enumeration datatype member memb_no.
      *
      * @param type_id
@@ -12837,7 +14010,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            value is null.
      **/
@@ -12851,6 +14024,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_native_type returns the equivalent native datatype for the datatype specified in type_id.
      *
      * @param type_id
@@ -12860,7 +14035,7 @@ public class H5 implements java.io.Serializable {
      * @return the native datatype identifier for the specified dataset datatype.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static long H5Tget_native_type(long type_id) throws HDF5LibraryException
     {
@@ -12868,6 +14043,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_native_type returns the equivalent native datatype for the datatype specified in type_id.
      *
      * @param type_id
@@ -12878,7 +14055,7 @@ public class H5 implements java.io.Serializable {
      * @return the native datatype identifier for the specified dataset datatype.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static long H5Tget_native_type(long type_id, int direction) throws HDF5LibraryException
     {
@@ -12895,6 +14072,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_nmembers retrieves the number of fields a compound datatype has.
      *
      * @param type_id
@@ -12903,11 +14082,13 @@ public class H5 implements java.io.Serializable {
      * @return number of members datatype has if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Tget_nmembers(long type_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_norm retrieves the mantissa normalization of a floating-point datatype.
      *
      * @param type_id
@@ -12916,11 +14097,13 @@ public class H5 implements java.io.Serializable {
      * @return a valid normalization type if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Tget_norm(long type_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tset_norm sets the mantissa normalization of a floating-point datatype.
      *
      * @param type_id
@@ -12931,11 +14114,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Tset_norm(long type_id, int norm) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_offset retrieves the bit offset of the first significant bit.
      *
      * @param type_id
@@ -12944,11 +14129,13 @@ public class H5 implements java.io.Serializable {
      * @return a positive offset value if successful; otherwise 0.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Tget_offset(long type_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tset_offset sets the bit offset of the first significant bit.
      *
      * @param type_id
@@ -12959,7 +14146,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static int H5Tset_offset(long type_id, int offset) throws HDF5LibraryException
     {
@@ -12968,6 +14155,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tset_offset sets the bit offset of the first significant bit.
      *
      * @param type_id
@@ -12976,12 +14165,14 @@ public class H5 implements java.io.Serializable {
      *            IN: Offset of first significant bit.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Tset_offset(long type_id, long offset)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_order returns the byte order of an atomic datatype.
      *
      * @param type_id
@@ -12990,11 +14181,13 @@ public class H5 implements java.io.Serializable {
      * @return a byte order constant if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Tget_order(long type_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tset_order sets the byte ordering of an atomic datatype.
      *
      * @param type_id
@@ -13005,11 +14198,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Tset_order(long type_id, int order) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_pad retrieves the padding type of the least and most-significant bit padding.
      *
      * @param type_id
@@ -13025,7 +14220,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            pad is null.
      **/
@@ -13033,6 +14228,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tset_pad sets the least and most-significant bits padding types.
      *
      * @param type_id
@@ -13045,12 +14242,14 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Tset_pad(long type_id, int lsb, int msb)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_precision returns the precision of an atomic datatype.
      *
      * @param type_id
@@ -13059,11 +14258,13 @@ public class H5 implements java.io.Serializable {
      * @return the number of significant bits if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Tget_precision(long type_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tset_precision sets the precision of an atomic datatype.
      *
      * @param type_id
@@ -13074,7 +14275,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static int H5Tset_precision(long type_id, int precision) throws HDF5LibraryException
     {
@@ -13083,6 +14284,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_precision returns the precision of an atomic datatype.
      *
      * @param type_id
@@ -13091,11 +14294,13 @@ public class H5 implements java.io.Serializable {
      * @return the number of significant bits if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native long H5Tget_precision_long(long type_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tset_precision sets the precision of an atomic datatype.
      *
      * @param type_id
@@ -13104,12 +14309,14 @@ public class H5 implements java.io.Serializable {
      *            IN: Number of bits of precision for datatype.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Tset_precision(long type_id, long precision)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_sign retrieves the sign type for an integer type.
      *
      * @param type_id
@@ -13118,11 +14325,13 @@ public class H5 implements java.io.Serializable {
      * @return a valid sign type if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Tget_sign(long type_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tset_sign sets the sign proprety for an integer type.
      *
      * @param type_id
@@ -13133,11 +14342,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Tset_sign(long type_id, int sign) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_size returns the size of a datatype in bytes.
      *
      * @param type_id
@@ -13146,11 +14357,13 @@ public class H5 implements java.io.Serializable {
      * @return the size of the datatype in bytes
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native long H5Tget_size(long type_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tset_size sets the total size in bytes, size, for an atomic datatype (this operation is not permitted
      * on compound datatypes).
      *
@@ -13162,11 +14375,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Tset_size(long type_id, long size) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_strpad retrieves the string padding method for a string datatype.
      *
      * @param type_id
@@ -13175,11 +14390,13 @@ public class H5 implements java.io.Serializable {
      * @return a valid string padding type if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Tget_strpad(long type_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tset_strpad defines the storage mechanism for the string.
      *
      * @param type_id
@@ -13190,11 +14407,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Tset_strpad(long type_id, int strpad) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_super returns the type from which TYPE is derived.
      *
      * @param type
@@ -13203,7 +14422,7 @@ public class H5 implements java.io.Serializable {
      * @return the parent type
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static long H5Tget_super(long type) throws HDF5LibraryException
     {
@@ -13219,6 +14438,8 @@ public class H5 implements java.io.Serializable {
     private synchronized static native long _H5Tget_super(long type) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_tag returns the tag associated with datatype type_id.
      *
      * @param type
@@ -13227,11 +14448,13 @@ public class H5 implements java.io.Serializable {
      * @return the tag
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native String H5Tget_tag(long type) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tset_tag tags an opaque datatype type_id with a unique ASCII identifier tag.
      *
      * @param type
@@ -13242,11 +14465,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Tset_tag(long type, String tag) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tinsert adds another member to the compound datatype type_id.
      *
      * @param type_id
@@ -13261,7 +14486,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -13269,6 +14494,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tis_variable_str determines whether the datatype identified in type_id is a variable-length string.
      *
      * @param type_id
@@ -13277,11 +14504,13 @@ public class H5 implements java.io.Serializable {
      * @return true if type_id is a variable-length string.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native boolean H5Tis_variable_str(long type_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tlock locks the datatype specified by the type_id identifier, making it read-only and
      * non-destrucible.
      *
@@ -13291,11 +14520,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Tlock(long type_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Topen opens a named datatype at the location specified by loc_id and return an identifier for the
      * datatype.
      *
@@ -13309,7 +14540,7 @@ public class H5 implements java.io.Serializable {
      * @return a named datatype identifier if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -13329,8 +14560,10 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tpack recursively removes padding from within a compound datatype to make it more efficient
-     * (space-wise) to store that data. <P> <b>WARNING:</b> This call only affects the C-data, even if it
+     * (space-wise) to store that data. <p> <b>WARNING:</b> This call only affects the C-data, even if it
      * succeeds, there may be no visible effect on Java objects.
      *
      * @param type_id
@@ -13339,11 +14572,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Tpack(long type_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tvlen_create creates a new variable-length (VL) dataype.
      *
      * @param base_id
@@ -13352,7 +14587,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static long H5Tvlen_create(long base_id) throws HDF5LibraryException
     {
@@ -13368,6 +14603,8 @@ public class H5 implements java.io.Serializable {
     private synchronized static native long _H5Tvlen_create(long base_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tflush causes all buffers associated with a committed datatype to be immediately flushed to disk
      * without removing the data from the cache.
      *
@@ -13375,11 +14612,13 @@ public class H5 implements java.io.Serializable {
      *            IN: Identifier of the committed datatype to be flushed.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Tflush(long dtype_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Trefresh causes all buffers associated with a committed datatype to be cleared and immediately
      * re-loaded with updated contents from disk. This function essentially closes the datatype, evicts
      * all metadata associated with it from the cache, and then re-opens the datatype. The reopened datatype
@@ -13389,7 +14628,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Identifier of the committed datatype to be refreshed.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Trefresh(long dtype_id) throws HDF5LibraryException;
 
@@ -13409,8 +14648,13 @@ public class H5 implements java.io.Serializable {
     // H5Z: Filter Interface Functions //
     // //
     // ////////////////////////////////////////////////////////////
+    /**
+     * @defgroup JH5Z Java Filter (H5Z) Interface
+     **/
 
     /**
+     * @ingroup JH5Z
+     *
      * H5Zfilter_avail checks if a filter is available.
      *
      * @param filter
@@ -13419,11 +14663,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative(TRUE/FALSE) value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Zfilter_avail(int filter) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5Z
+     *
      * H5Zget_filter_info gets information about a pipeline data filter.
      *
      * @param filter
@@ -13432,11 +14678,13 @@ public class H5 implements java.io.Serializable {
      * @return the filter information flags
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Zget_filter_info(int filter) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5Z
+     *
      * H5Zunregister unregisters a filter.
      *
      * @param filter
@@ -13445,7 +14693,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Zunregister(int filter) throws HDF5LibraryException;
 
diff --git a/java/src/hdf/hdf5lib/HDF5Constants.java b/java/src/hdf/hdf5lib/HDF5Constants.java
index bcf3eab..67b9259 100644
--- a/java/src/hdf/hdf5lib/HDF5Constants.java
+++ b/java/src/hdf/hdf5lib/HDF5Constants.java
@@ -14,14 +14,15 @@
 package hdf.hdf5lib;
 
 /**
+ * @page HDF5CONST Constants and Enumerated Types
  * This class contains C constants and enumerated types of HDF5 library. The
- * values of these constants are obtained from the library by calling J2C(int
- * jconstant), where jconstant is any of the private constants which start their
- * name with "JH5" need to be converted.
+ * values of these constants are obtained from the library by calling
+ * the JNI function jconstant, where jconstant is any of the private constants
+ * which start their name with "H5" need to be converted.
  * <P>
  * <B>Do not edit this file!</b>
  *
- * <b>See also:</b> hdf.hdf5lib.HDF5Library
+ * @see @ref HDF5LIB
  */
 public class HDF5Constants {
     static { H5.loadH5Lib(); }
diff --git a/java/src/hdf/hdf5lib/HDF5GroupInfo.java b/java/src/hdf/hdf5lib/HDF5GroupInfo.java
deleted file mode 100644
index 880f003..0000000
--- a/java/src/hdf/hdf5lib/HDF5GroupInfo.java
+++ /dev/null
@@ -1,182 +0,0 @@
-/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
- * Copyright by The HDF Group.                                               *
- * Copyright by the Board of Trustees of the University of Illinois.         *
- * All rights reserved.                                                      *
- *                                                                           *
- * This file is part of HDF5.  The full HDF5 copyright notice, including     *
- * terms governing use, modification, and redistribution, is contained in    *
- * the COPYING file, which can be found at the root of the source code       *
- * distribution tree, or in https://www.hdfgroup.org/licenses.               *
- * If you do not have access to either file, you may request a copy from     *
- * help@hdfgroup.org.                                                        *
- * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
-
-package hdf.hdf5lib;
-
-/**
- * <p>
- * This class is a container for the information reported about an HDF5 Object
- * from the H5Gget_obj_info() method.
- * <p>
- * The fileno and objno fields contain four values which uniquely identify an
- * object among those HDF5 files which are open: if all four values are the same
- * between two objects, then the two objects are the same (provided both files
- * are still open). The nlink field is the number of hard links to the object or
- * zero when information is being returned about a symbolic link (symbolic links
- * do not have hard links but all other objects always have at least one). The
- * type field contains the type of the object, one of H5G_GROUP, H5G_DATASET, or
- * H5G_LINK. The mtime field contains the modification time. If information is
- * being returned about a symbolic link then linklen will be the length of the
- * link value (the name of the pointed-to object with the null terminator);
- * otherwise linklen will be zero. Other fields may be added to this structure
- * in the future.
- */
-
-public class HDF5GroupInfo {
-    long[] fileno;
-    long[] objno;
-    int nlink;
-    int type;
-    long mtime;
-    int linklen;
-
-    /**
-     * Container for the information reported about an HDF5 Object
-     * from the H5Gget_obj_info() method
-     */
-    public HDF5GroupInfo()
-    {
-        fileno  = new long[2];
-        objno   = new long[2];
-        nlink   = -1;
-        type    = -1;
-        mtime   = 0;
-        linklen = 0;
-    }
-
-    /**
-     * Sets the HDF5 group information. Used by the JHI5.
-     *
-     * @param fn
-     *            File id number
-     * @param on
-     *            Object id number
-     * @param nl
-     *            Number of links
-     * @param t
-     *            Type of the object
-     * @param mt
-     *            Modification time
-     * @param len
-     *            Length of link
-     **/
-    public void setGroupInfo(long[] fn, long[] on, int nl, int t, long mt, int len)
-    {
-        fileno  = fn;
-        objno   = on;
-        nlink   = nl;
-        type    = t;
-        mtime   = mt;
-        linklen = len;
-    }
-
-    /** Resets all the group information to defaults. */
-    public void reset()
-    {
-        fileno[0] = 0;
-        fileno[1] = 0;
-        objno[0]  = 0;
-        objno[1]  = 0;
-        nlink     = -1;
-        type      = -1;
-        mtime     = 0;
-        linklen   = 0;
-    }
-
-    /**
-     * fileno accessors
-     * @return the file number if successful
-     */
-    public long[] getFileno() { return fileno; }
-
-    /**
-     * accessors
-     * @return the object number if successful
-     */
-    public long[] getObjno() { return objno; }
-
-    /**
-     * accessors
-     * @return type of group if successful
-     */
-    public int getType() { return type; }
-
-    /**
-     * accessors
-     * @return the number of links in the group if successful
-     */
-    public int getNlink() { return nlink; }
-
-    /**
-     * accessors
-     * @return the modified time value if successful
-     */
-    public long getMtime() { return mtime; }
-
-    /**
-     * accessors
-     * @return a length of link name if successful
-     */
-    public int getLinklen() { return linklen; }
-
-    /**
-     * The fileno and objno fields contain four values which uniquely identify
-     * an object among those HDF5 files.
-     */
-    @Override
-    public boolean equals(Object obj)
-    {
-        if (!(obj instanceof HDF5GroupInfo)) {
-            return false;
-        }
-
-        HDF5GroupInfo target = (HDF5GroupInfo)obj;
-        if ((fileno[0] == target.fileno[0]) && (fileno[1] == target.fileno[1]) &&
-            (objno[0] == target.objno[0]) && (objno[1] == target.objno[1])) {
-            return true;
-        }
-        else {
-            return false;
-        }
-    }
-
-    /**
-     * Returns the object id.
-     *
-     * @return the object id
-     */
-    public long getOID() { return objno[0]; }
-
-    /**
-     * Converts this object to a String representation.
-     *
-     * @return a string representation of this object
-     */
-    @Override
-    public String toString()
-    {
-        String fileStr = "fileno=null";
-        String objStr  = "objno=null";
-
-        if (fileno != null) {
-            fileStr = "fileno[0]=" + fileno[0] + ",fileno[1]=" + fileno[1];
-        }
-
-        if (objno != null) {
-            objStr = "objno[0]=" + objno[0] + ",objno[1]=" + objno[1];
-        }
-
-        return getClass().getName() + "[" + fileStr + "," + objStr + ",type=" + type + ",nlink=" + nlink +
-            ",mtime=" + mtime + ",linklen=" + linklen + "]";
-    }
-}
diff --git a/java/src/hdf/hdf5lib/HDFArray.java b/java/src/hdf/hdf5lib/HDFArray.java
index 8525fb0..9ea314d 100644
--- a/java/src/hdf/hdf5lib/HDFArray.java
+++ b/java/src/hdf/hdf5lib/HDFArray.java
@@ -19,14 +19,15 @@ import hdf.hdf5lib.exceptions.HDF5Exception;
 import hdf.hdf5lib.exceptions.HDF5JavaException;
 
 /**
+ * @page HDFARRAY Java Array Conversion
  * This is a class for handling multidimensional arrays for HDF.
  * <p>
  * The purpose is to allow the storage and retrieval of arbitrary array types containing scientific data.
  * <p>
  * The methods support the conversion of an array to and from Java to a one-dimensional array of bytes
- * suitable for I/O by the C library. <p> This class heavily uses the <a
- * href="./hdf.hdf5lib.HDFNativeData.html">HDFNativeData</a> class to convert between Java and C
- * representations.
+ * suitable for I/O by the C library. <p> This class heavily uses the
+ * @ref HDFNATIVE
+ * class to convert between Java and C representations.
  */
 
 public class HDFArray {
diff --git a/java/src/hdf/hdf5lib/HDFNativeData.java b/java/src/hdf/hdf5lib/HDFNativeData.java
index c497043..bc4e866 100644
--- a/java/src/hdf/hdf5lib/HDFNativeData.java
+++ b/java/src/hdf/hdf5lib/HDFNativeData.java
@@ -17,11 +17,12 @@ import hdf.hdf5lib.exceptions.HDF5Exception;
 import hdf.hdf5lib.exceptions.HDF5JavaException;
 
 /**
+ * @page HDFNATIVE Native Arrays of Numbers
  * This class encapsulates native methods to deal with arrays of numbers,
  * converting from numbers to bytes and bytes to numbers.
  * <p>
- * These routines are used by class <b>HDFArray</b> to pass data to and from the
- * HDF-5 library.
+ * These routines are used by class @ref HDFARRAY to pass data to and from the
+ * HDF5 library.
  * <p>
  * Methods xxxToByte() convert a Java array of primitive numbers (int, short,
  * ...) to a Java array of bytes. Methods byteToXxx() convert from a Java array
@@ -30,7 +31,7 @@ import hdf.hdf5lib.exceptions.HDF5JavaException;
  * Variant interfaces convert a section of an array, and also can convert to
  * sub-classes of Java <b>Number</b>.
  * <P>
- * <b>See also:</b> hdf.hdf5lib.HDFArray.
+ * @see @ref HDFARRAY.
  */
 
 public class HDFNativeData {
diff --git a/java/src/hdf/hdf5lib/callbacks/Callbacks.java b/java/src/hdf/hdf5lib/callbacks/Callbacks.java
index 86d6193..3d5fbd1 100644
--- a/java/src/hdf/hdf5lib/callbacks/Callbacks.java
+++ b/java/src/hdf/hdf5lib/callbacks/Callbacks.java
@@ -13,6 +13,7 @@
 package hdf.hdf5lib.callbacks;
 
 /**
+ * @page CALLBACKS HDF5 Java Callbacks Interface
  * All callback definitions must derive from this interface.  Any
  * derived interfaces must define a single public method  named "callback".
  * You are responsible for deregistering your callback (if necessary)
@@ -20,11 +21,14 @@ package hdf.hdf5lib.callbacks;
  * a callback which has been GC'd, you will likely crash the VM.  If
  * there is no method to deregister the callback (e.g. <code>atexit</code>
  * in the C library), you must ensure that you always keep a live reference
- * to the callback object.<p>
+ * to the callback object.
+ *
  * A callback should generally never throw an exception, since it doesn't
  * necessarily have an encompassing Java environment to catch it.  Any
  * exceptions thrown will be passed to the default callback exception
  * handler.
+ *
+ * @defgroup JCALL HDF5 Library Java Callbacks
  */
 public interface Callbacks {
 }
diff --git a/java/src/hdf/hdf5lib/callbacks/H5A_iterate_cb.java b/java/src/hdf/hdf5lib/callbacks/H5A_iterate_cb.java
index 6c68f36..9958b3b 100644
--- a/java/src/hdf/hdf5lib/callbacks/H5A_iterate_cb.java
+++ b/java/src/hdf/hdf5lib/callbacks/H5A_iterate_cb.java
@@ -20,6 +20,8 @@ import hdf.hdf5lib.structs.H5A_info_t;
  */
 public interface H5A_iterate_cb extends Callbacks {
     /**
+     * @ingroup JCALL
+     *
      *  application callback for each attribute
      *
      *  @param loc_id    the ID for the group or dataset being iterated over
diff --git a/java/src/hdf/hdf5lib/callbacks/H5D_append_cb.java b/java/src/hdf/hdf5lib/callbacks/H5D_append_cb.java
index cf7ada6..49323a2 100644
--- a/java/src/hdf/hdf5lib/callbacks/H5D_append_cb.java
+++ b/java/src/hdf/hdf5lib/callbacks/H5D_append_cb.java
@@ -18,6 +18,8 @@ package hdf.hdf5lib.callbacks;
  */
 public interface H5D_append_cb extends Callbacks {
     /**
+     * @ingroup JCALL
+     *
      *  application callback for each dataset access property list
      *
      *  @param dataset_id    the ID for the dataset being iterated over
diff --git a/java/src/hdf/hdf5lib/callbacks/H5D_iterate_cb.java b/java/src/hdf/hdf5lib/callbacks/H5D_iterate_cb.java
index 54c12e3..5f77998 100644
--- a/java/src/hdf/hdf5lib/callbacks/H5D_iterate_cb.java
+++ b/java/src/hdf/hdf5lib/callbacks/H5D_iterate_cb.java
@@ -18,6 +18,8 @@ package hdf.hdf5lib.callbacks;
  */
 public interface H5D_iterate_cb extends Callbacks {
     /**
+     * @ingroup JCALL
+     *
      *  application callback for each dataset element
      *
      *  @param elem      the pointer to the element in memory containing the current point
diff --git a/java/src/hdf/hdf5lib/callbacks/H5E_walk_cb.java b/java/src/hdf/hdf5lib/callbacks/H5E_walk_cb.java
index 5722195..a8ef5df 100644
--- a/java/src/hdf/hdf5lib/callbacks/H5E_walk_cb.java
+++ b/java/src/hdf/hdf5lib/callbacks/H5E_walk_cb.java
@@ -20,6 +20,8 @@ import hdf.hdf5lib.structs.H5E_error2_t;
  */
 public interface H5E_walk_cb extends Callbacks {
     /**
+     * @ingroup JCALL
+     *
      *  application callback for each error stack element
      *
      *  @param nidx      the index of the current error stack element
diff --git a/java/src/hdf/hdf5lib/callbacks/H5L_iterate_cb.java b/java/src/hdf/hdf5lib/callbacks/H5L_iterate_cb.java
index 663d761..bccf79a 100644
--- a/java/src/hdf/hdf5lib/callbacks/H5L_iterate_cb.java
+++ b/java/src/hdf/hdf5lib/callbacks/H5L_iterate_cb.java
@@ -20,6 +20,8 @@ import hdf.hdf5lib.structs.H5L_info_t;
  */
 public interface H5L_iterate_cb extends Callbacks {
     /**
+     * @ingroup JCALL
+     *
      *  application callback for each group
      *
      *  @param loc_id    the ID for the group being iterated over
diff --git a/java/src/hdf/hdf5lib/callbacks/H5O_iterate_cb.java b/java/src/hdf/hdf5lib/callbacks/H5O_iterate_cb.java
index 054230f..1977cb2 100644
--- a/java/src/hdf/hdf5lib/callbacks/H5O_iterate_cb.java
+++ b/java/src/hdf/hdf5lib/callbacks/H5O_iterate_cb.java
@@ -20,6 +20,8 @@ import hdf.hdf5lib.structs.H5O_info_t;
  */
 public interface H5O_iterate_cb extends Callbacks {
     /**
+     * @ingroup JCALL
+     *
      *  application callback for each group
      *
      *  @param loc_id    the ID for the group or dataset being iterated over
diff --git a/java/src/hdf/hdf5lib/callbacks/H5P_cls_close_func_cb.java b/java/src/hdf/hdf5lib/callbacks/H5P_cls_close_func_cb.java
index 0a09a94..a235861 100644
--- a/java/src/hdf/hdf5lib/callbacks/H5P_cls_close_func_cb.java
+++ b/java/src/hdf/hdf5lib/callbacks/H5P_cls_close_func_cb.java
@@ -18,6 +18,8 @@ package hdf.hdf5lib.callbacks;
  */
 public interface H5P_cls_close_func_cb extends Callbacks {
     /**
+     * @ingroup JCALL
+     *
      *  application callback for each property list
      *
      *  @param prop_id     the ID for the property list class being iterated over
diff --git a/java/src/hdf/hdf5lib/callbacks/H5P_cls_copy_func_cb.java b/java/src/hdf/hdf5lib/callbacks/H5P_cls_copy_func_cb.java
index 53f86be..b218e0c 100644
--- a/java/src/hdf/hdf5lib/callbacks/H5P_cls_copy_func_cb.java
+++ b/java/src/hdf/hdf5lib/callbacks/H5P_cls_copy_func_cb.java
@@ -18,6 +18,8 @@ package hdf.hdf5lib.callbacks;
  */
 public interface H5P_cls_copy_func_cb extends Callbacks {
     /**
+     * @ingroup JCALL
+     *
      *  application callback for each property list
      *
      *  @param new_prop_id   the ID for the property list copy
diff --git a/java/src/hdf/hdf5lib/callbacks/H5P_cls_create_func_cb.java b/java/src/hdf/hdf5lib/callbacks/H5P_cls_create_func_cb.java
index 8f4e782..3d407d0 100644
--- a/java/src/hdf/hdf5lib/callbacks/H5P_cls_create_func_cb.java
+++ b/java/src/hdf/hdf5lib/callbacks/H5P_cls_create_func_cb.java
@@ -18,6 +18,8 @@ package hdf.hdf5lib.callbacks;
  */
 public interface H5P_cls_create_func_cb extends Callbacks {
     /**
+     * @ingroup JCALL
+     *
      *  application callback for each property list
      *
      *  @param prop_id       the ID for the property list class being iterated over
diff --git a/java/src/hdf/hdf5lib/callbacks/H5P_iterate_cb.java b/java/src/hdf/hdf5lib/callbacks/H5P_iterate_cb.java
index db98a67..51a5768 100644
--- a/java/src/hdf/hdf5lib/callbacks/H5P_iterate_cb.java
+++ b/java/src/hdf/hdf5lib/callbacks/H5P_iterate_cb.java
@@ -18,6 +18,8 @@ package hdf.hdf5lib.callbacks;
  */
 public interface H5P_iterate_cb extends Callbacks {
     /**
+     * @ingroup JCALL
+     *
      *  application callback for each property list
      *
      *  @param plist     the ID for the property list being iterated over
diff --git a/java/src/hdf/hdf5lib/callbacks/H5P_prp_close_func_cb.java b/java/src/hdf/hdf5lib/callbacks/H5P_prp_close_func_cb.java
index 1aa7ce4..2ddc980 100644
--- a/java/src/hdf/hdf5lib/callbacks/H5P_prp_close_func_cb.java
+++ b/java/src/hdf/hdf5lib/callbacks/H5P_prp_close_func_cb.java
@@ -18,6 +18,8 @@ package hdf.hdf5lib.callbacks;
  */
 public interface H5P_prp_close_func_cb extends Callbacks {
     /**
+     * @ingroup JCALL
+     *
      *  application callback for each property list
      *
      *  @param name    the name of the property being closed
diff --git a/java/src/hdf/hdf5lib/callbacks/H5P_prp_compare_func_cb.java b/java/src/hdf/hdf5lib/callbacks/H5P_prp_compare_func_cb.java
index 49cef7d..53caa94 100644
--- a/java/src/hdf/hdf5lib/callbacks/H5P_prp_compare_func_cb.java
+++ b/java/src/hdf/hdf5lib/callbacks/H5P_prp_compare_func_cb.java
@@ -18,6 +18,8 @@ package hdf.hdf5lib.callbacks;
  */
 public interface H5P_prp_compare_func_cb extends Callbacks {
     /**
+     * @ingroup JCALL
+     *
      *  application callback for each property list
      *
      *  @param value1  the value of the first property being compared
diff --git a/java/src/hdf/hdf5lib/callbacks/H5P_prp_copy_func_cb.java b/java/src/hdf/hdf5lib/callbacks/H5P_prp_copy_func_cb.java
index f4924ee..0b2349e 100644
--- a/java/src/hdf/hdf5lib/callbacks/H5P_prp_copy_func_cb.java
+++ b/java/src/hdf/hdf5lib/callbacks/H5P_prp_copy_func_cb.java
@@ -18,6 +18,8 @@ package hdf.hdf5lib.callbacks;
  */
 public interface H5P_prp_copy_func_cb extends Callbacks {
     /**
+     * @ingroup JCALL
+     *
      *  application callback for each property list
      *
      *  @param name      the name of the property being copied
diff --git a/java/src/hdf/hdf5lib/callbacks/H5P_prp_create_func_cb.java b/java/src/hdf/hdf5lib/callbacks/H5P_prp_create_func_cb.java
index bce024b..6065ce0 100644
--- a/java/src/hdf/hdf5lib/callbacks/H5P_prp_create_func_cb.java
+++ b/java/src/hdf/hdf5lib/callbacks/H5P_prp_create_func_cb.java
@@ -18,6 +18,8 @@ package hdf.hdf5lib.callbacks;
  */
 public interface H5P_prp_create_func_cb extends Callbacks {
     /**
+     * @ingroup JCALL
+     *
      *  application callback for each property list
      *
      *  @param name      the name of the property list being created
diff --git a/java/src/hdf/hdf5lib/callbacks/H5P_prp_delete_func_cb.java b/java/src/hdf/hdf5lib/callbacks/H5P_prp_delete_func_cb.java
index 8c5dccc..4384ca7 100644
--- a/java/src/hdf/hdf5lib/callbacks/H5P_prp_delete_func_cb.java
+++ b/java/src/hdf/hdf5lib/callbacks/H5P_prp_delete_func_cb.java
@@ -18,6 +18,8 @@ package hdf.hdf5lib.callbacks;
  */
 public interface H5P_prp_delete_func_cb extends Callbacks {
     /**
+     * @ingroup JCALL
+     *
      *  application callback for each property list
      *
      *  @param prop_id   the ID of the property list the property is deleted from
diff --git a/java/src/hdf/hdf5lib/callbacks/H5P_prp_get_func_cb.java b/java/src/hdf/hdf5lib/callbacks/H5P_prp_get_func_cb.java
index 0f3457f..999c7b0 100644
--- a/java/src/hdf/hdf5lib/callbacks/H5P_prp_get_func_cb.java
+++ b/java/src/hdf/hdf5lib/callbacks/H5P_prp_get_func_cb.java
@@ -18,6 +18,8 @@ package hdf.hdf5lib.callbacks;
  */
 public interface H5P_prp_get_func_cb extends Callbacks {
     /**
+     * @ingroup JCALL
+     *
      *  application callback for each property list
      *
      *  @param prop_id   the ID for the property list being queried
diff --git a/java/src/hdf/hdf5lib/callbacks/H5P_prp_set_func_cb.java b/java/src/hdf/hdf5lib/callbacks/H5P_prp_set_func_cb.java
index a55ca3a..893344b 100644
--- a/java/src/hdf/hdf5lib/callbacks/H5P_prp_set_func_cb.java
+++ b/java/src/hdf/hdf5lib/callbacks/H5P_prp_set_func_cb.java
@@ -18,6 +18,8 @@ package hdf.hdf5lib.callbacks;
  */
 public interface H5P_prp_set_func_cb extends Callbacks {
     /**
+     * @ingroup JCALL
+     *
      *  application callback for each property list
      *
      *  @param prop_id   the ID for the property list being modified
diff --git a/java/src/hdf/hdf5lib/callbacks/package-info.java b/java/src/hdf/hdf5lib/callbacks/package-info.java
index 114045c..5ef3fab 100644
--- a/java/src/hdf/hdf5lib/callbacks/package-info.java
+++ b/java/src/hdf/hdf5lib/callbacks/package-info.java
@@ -12,6 +12,7 @@
  * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
 
 /**
+ * @page CALLBACKS_UG HDF5 Java Callbacks Interface
  * All callback definitions must derive from the Callbacks interface.  Any
  * derived interfaces must define a single public method named "callback".
  * You are responsible for deregistering your callback (if necessary)
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5AtomException.java b/java/src/hdf/hdf5lib/exceptions/HDF5AtomException.java
index a1473c4..280db7d 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5AtomException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5AtomException.java
@@ -16,17 +16,21 @@ package hdf.hdf5lib.exceptions;
 /**
  * The class HDF5LibraryException returns errors raised by the HDF5 library.
  * <p>
- * This sub-class represents HDF-5 major error code <b>H5E_ATOM</b>
+ * This sub-class represents HDF5 major error code <b>H5E_ATOM</b>
  */
 
 public class HDF5AtomException extends HDF5LibraryException {
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5AtomException</code> with no specified detail
      * message.
      */
     public HDF5AtomException() { super(); }
 
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5AtomException</code> with the specified detail
      * message.
      *
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5AttributeException.java b/java/src/hdf/hdf5lib/exceptions/HDF5AttributeException.java
index 4cb7b1d..f8b526e 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5AttributeException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5AttributeException.java
@@ -16,16 +16,20 @@ package hdf.hdf5lib.exceptions;
 /**
  * The class HDF5LibraryException returns errors raised by the HDF5 library.
  * <p>
- * This sub-class represents HDF-5 major error code <b>H5E_ATTR</b>
+ * This sub-class represents HDF5 major error code <b>H5E_ATTR</b>
  */
 public class HDF5AttributeException extends HDF5LibraryException {
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5AttributeException</code> with no specified
      * detail message.
      */
     public HDF5AttributeException() { super(); }
 
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5AttributeException</code> with the specified
      * detail message.
      *
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5BtreeException.java b/java/src/hdf/hdf5lib/exceptions/HDF5BtreeException.java
index 9f70456..71b8e47 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5BtreeException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5BtreeException.java
@@ -16,16 +16,20 @@ package hdf.hdf5lib.exceptions;
 /**
  * The class HDF5LibraryException returns errors raised by the HDF5 library.
  * <p>
- * This sub-class represents HDF-5 major error code <b>H5E_BTREE</b>
+ * This sub-class represents HDF5 major error code <b>H5E_BTREE</b>
  */
 public class HDF5BtreeException extends HDF5LibraryException {
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5BtreeException</code> with no specified detail
      * message.
      */
     public HDF5BtreeException() { super(); }
 
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5BtreeException</code> with the specified detail
      * message.
      *
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5DataFiltersException.java b/java/src/hdf/hdf5lib/exceptions/HDF5DataFiltersException.java
index b4397b7..a837708 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5DataFiltersException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5DataFiltersException.java
@@ -16,16 +16,20 @@ package hdf.hdf5lib.exceptions;
 /**
  * The class HDF5LibraryException returns errors raised by the HDF5 library.
  * <p>
- * This sub-class represents HDF-5 major error code <b>H5E_PLINE</b>
+ * This sub-class represents HDF5 major error code <b>H5E_PLINE</b>
  */
 public class HDF5DataFiltersException extends HDF5LibraryException {
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5DataFiltersException</code> with no specified
      * detail message.
      */
     public HDF5DataFiltersException() { super(); }
 
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5DataFiltersException</code> with the specified
      * detail message.
      *
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5DataStorageException.java b/java/src/hdf/hdf5lib/exceptions/HDF5DataStorageException.java
index f6993a8..d9f49da 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5DataStorageException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5DataStorageException.java
@@ -16,17 +16,21 @@ package hdf.hdf5lib.exceptions;
 /**
  * The class HDF5LibraryException returns errors raised by the HDF5 library.
  * <p>
- * This sub-class represents HDF-5 major error code <b>H5E_STORAGE</b>
+ * This sub-class represents HDF5 major error code <b>H5E_STORAGE</b>
  */
 
 public class HDF5DataStorageException extends HDF5LibraryException {
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5DataStorageExceptionn</code> with no specified
      * detail message.
      */
     public HDF5DataStorageException() { super(); }
 
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5DataStorageException</code> with the specified
      * detail message.
      *
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5DatasetInterfaceException.java b/java/src/hdf/hdf5lib/exceptions/HDF5DatasetInterfaceException.java
index 8fd4ae9..fea1346 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5DatasetInterfaceException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5DatasetInterfaceException.java
@@ -16,16 +16,20 @@ package hdf.hdf5lib.exceptions;
 /**
  * The class HDF5LibraryException returns errors raised by the HDF5 library.
  * <p>
- * This sub-class represents HDF-5 major error code <b>H5E_DATASET</b>
+ * This sub-class represents HDF5 major error code <b>H5E_DATASET</b>
  */
 public class HDF5DatasetInterfaceException extends HDF5LibraryException {
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5DatasetInterfaceException</code> with no
      * specified detail message.
      */
     public HDF5DatasetInterfaceException() { super(); }
 
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5DatasetInterfaceException</code> with the
      * specified detail message.
      *
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5DataspaceInterfaceException.java b/java/src/hdf/hdf5lib/exceptions/HDF5DataspaceInterfaceException.java
index d0d2a09..e2d29d0 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5DataspaceInterfaceException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5DataspaceInterfaceException.java
@@ -16,17 +16,21 @@ package hdf.hdf5lib.exceptions;
 /**
  * The class HDF5LibraryException returns errors raised by the HDF5 library.
  * <p>
- * This sub-class represents HDF-5 major error code <b>H5E_DATASPACE</b>
+ * This sub-class represents HDF5 major error code <b>H5E_DATASPACE</b>
  */
 
 public class HDF5DataspaceInterfaceException extends HDF5LibraryException {
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5DataspaceInterfaceException</code> with no
      * specified detail message.
      */
     public HDF5DataspaceInterfaceException() { super(); }
 
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5DataspaceInterfaceException</code> with the
      * specified detail message.
      *
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5DatatypeInterfaceException.java b/java/src/hdf/hdf5lib/exceptions/HDF5DatatypeInterfaceException.java
index 2ab4ff9..d7e678b 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5DatatypeInterfaceException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5DatatypeInterfaceException.java
@@ -16,17 +16,21 @@ package hdf.hdf5lib.exceptions;
 /**
  * The class HDF5LibraryException returns errors raised by the HDF5 library.
  * <p>
- * This sub-class represents HDF-5 major error code <b>H5E_DATATYPE</b>
+ * This sub-class represents HDF5 major error code <b>H5E_DATATYPE</b>
  */
 
 public class HDF5DatatypeInterfaceException extends HDF5LibraryException {
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5DatatypeInterfaceException</code> with no
      * specified detail message.
      */
     public HDF5DatatypeInterfaceException() { super(); }
 
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5DatatypeInterfaceException</code> with the
      * specified detail message.
      *
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5Exception.java b/java/src/hdf/hdf5lib/exceptions/HDF5Exception.java
index b098a12..ad42644 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5Exception.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5Exception.java
@@ -14,21 +14,23 @@
 package hdf.hdf5lib.exceptions;
 
 /**
- * <p>
+ * @page ERRORS Errors and Exceptions
  * The class HDF5Exception returns errors from the Java HDF5 Interface.
- * <p>
+ *
  * Two sub-classes of HDF5Exception are defined:
  * <ol>
  * <li>
- * HDF5LibraryException -- errors raised the HDF5 library code
+ * HDF5LibraryException -- errors raised by the HDF5 library code
  * <li>
- * HDF5JavaException -- errors raised the HDF5 Java wrapper code
+ * HDF5JavaException -- errors raised by the HDF5 Java wrapper code
  * </ol>
- * <p>
+ *
  * These exceptions are sub-classed to represent specific error conditions, as
  * needed. In particular, HDF5LibraryException has a sub-class for each major
  * error code returned by the HDF5 library.
  *
+ * @defgroup JERR HDF5 Library Exception Interface
+ *
  */
 public class HDF5Exception extends RuntimeException {
     /**
@@ -37,12 +39,16 @@ public class HDF5Exception extends RuntimeException {
     protected String detailMessage;
 
     /**
+     * @ingroup JERR
+     *
      * Constructs an <code>HDF5Exception</code> with no specified detail
      * message.
      */
     public HDF5Exception() { super(); }
 
     /**
+     * @ingroup JERR
+     *
      * Constructs an <code>HDF5Exception</code> with the specified detail
      * message.
      *
@@ -56,6 +62,8 @@ public class HDF5Exception extends RuntimeException {
     }
 
     /**
+     * @ingroup JERR
+     *
      * Returns the detail message of this exception
      *
      * @return the detail message or <code>null</code> if this object does not
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5ExternalFileListException.java b/java/src/hdf/hdf5lib/exceptions/HDF5ExternalFileListException.java
index c8df3d0..f9f49a1 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5ExternalFileListException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5ExternalFileListException.java
@@ -16,17 +16,21 @@ package hdf.hdf5lib.exceptions;
 /**
  * The class HDF5LibraryException returns errors raised by the HDF5 library.
  * <p>
- * This sub-class represents HDF-5 major error code <b>H5E_EFL</b>
+ * This sub-class represents HDF5 major error code <b>H5E_EFL</b>
  */
 
 public class HDF5ExternalFileListException extends HDF5LibraryException {
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5ExternalFileListException</code> with no
      * specified detail message.
      */
     public HDF5ExternalFileListException() { super(); }
 
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5ExternalFileListException</code> with the
      * specified detail message.
      *
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5FileInterfaceException.java b/java/src/hdf/hdf5lib/exceptions/HDF5FileInterfaceException.java
index afd6d69..3ebe63a 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5FileInterfaceException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5FileInterfaceException.java
@@ -16,17 +16,21 @@ package hdf.hdf5lib.exceptions;
 /**
  * The class HDF5LibraryException returns errors raised by the HDF5 library.
  * <p>
- * This sub-class represents HDF-5 major error code <b>H5E_FILE</b>
+ * This sub-class represents HDF5 major error code <b>H5E_FILE</b>
  */
 
 public class HDF5FileInterfaceException extends HDF5LibraryException {
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5FileInterfaceException</code> with no specified
      * detail message.
      */
     public HDF5FileInterfaceException() { super(); }
 
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5FileInterfaceException</code> with the specified
      * detail message.
      *
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5FunctionArgumentException.java b/java/src/hdf/hdf5lib/exceptions/HDF5FunctionArgumentException.java
index 58e2980..3dc0c72 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5FunctionArgumentException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5FunctionArgumentException.java
@@ -16,17 +16,21 @@ package hdf.hdf5lib.exceptions;
 /**
  * The class HDF5LibraryException returns errors raised by the HDF5 library.
  * <p>
- * This sub-class represents HDF-5 major error code <b>H5E_ARGS</b>
+ * This sub-class represents HDF5 major error code <b>H5E_ARGS</b>
  */
 
 public class HDF5FunctionArgumentException extends HDF5LibraryException {
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5FunctionArgumentException</code> with no
      * specified detail message.
      */
     public HDF5FunctionArgumentException() { super(); }
 
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5FunctionArgumentException</code> with the
      * specified detail message.
      *
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5FunctionEntryExitException.java b/java/src/hdf/hdf5lib/exceptions/HDF5FunctionEntryExitException.java
index db46aae..aa9289c 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5FunctionEntryExitException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5FunctionEntryExitException.java
@@ -16,17 +16,21 @@ package hdf.hdf5lib.exceptions;
 /**
  * The class HDF5LibraryException returns errors raised by the HDF5 library.
  * <p>
- * This sub-class represents HDF-5 major error code <b>H5E_FUNC</b>
+ * This sub-class represents HDF5 major error code <b>H5E_FUNC</b>
  */
 
 public class HDF5FunctionEntryExitException extends HDF5LibraryException {
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5FunctionEntryExitException</code> with no
      * specified detail message.
      */
     public HDF5FunctionEntryExitException() { super(); }
 
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5FunctionEntryExitException</code> with the
      * specified detail message.
      *
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5HeapException.java b/java/src/hdf/hdf5lib/exceptions/HDF5HeapException.java
index 7f1691d..ba1b5ad 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5HeapException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5HeapException.java
@@ -16,17 +16,21 @@ package hdf.hdf5lib.exceptions;
 /**
  * The class HDF5LibraryException returns errors raised by the HDF5 library.
  * <p>
- * This sub-class represents HDF-5 major error code <b>H5E_HEAP</b>
+ * This sub-class represents HDF5 major error code <b>H5E_HEAP</b>
  */
 
 public class HDF5HeapException extends HDF5LibraryException {
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5HeapException</code> with no specified detail
      * message.
      */
     public HDF5HeapException() { super(); }
 
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5HeapException</code> with the specified detail
      * message.
      *
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5InternalErrorException.java b/java/src/hdf/hdf5lib/exceptions/HDF5InternalErrorException.java
index 4489486..31efe56 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5InternalErrorException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5InternalErrorException.java
@@ -16,17 +16,21 @@ package hdf.hdf5lib.exceptions;
 /**
  * The class HDF5LibraryException returns errors raised by the HDF5 library.
  * <p>
- * This sub-class represents HDF-5 major error code <b>H5E_INTERNAL</b>
+ * This sub-class represents HDF5 major error code <b>H5E_INTERNAL</b>
  */
 
 public class HDF5InternalErrorException extends HDF5LibraryException {
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5InternalErrorException</code> with no specified
      * detail message.
      */
     public HDF5InternalErrorException() { super(); }
 
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5InternalErrorException</code> with the specified
      * detail message.
      *
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5JavaException.java b/java/src/hdf/hdf5lib/exceptions/HDF5JavaException.java
index ae1cf85..9b38b87 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5JavaException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5JavaException.java
@@ -14,21 +14,27 @@
 package hdf.hdf5lib.exceptions;
 
 /**
- * <p>
+ * @page ERRORSJAVA Java Wrapper Errors and Exceptions
  * The class HDF5JavaException returns errors from the Java wrapper of theHDF5
  * library.
  * <p>
  * These errors include Java configuration errors, security violations, and
  * resource exhaustion.
+ *
+ * @defgroup JERRJAVA HDF5 Library Java Exception Interface
  */
 public class HDF5JavaException extends HDF5Exception {
     /**
+     * @ingroup JERRJAVA
+     *
      * Constructs an <code>HDF5JavaException</code> with no specified detail
      * message.
      */
     public HDF5JavaException() { super(); }
 
     /**
+     * @ingroup JERRJAVA
+     *
      * Constructs an <code>HDF5JavaException</code> with the specified detail
      * message.
      *
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5LibraryException.java b/java/src/hdf/hdf5lib/exceptions/HDF5LibraryException.java
index 2e3fdd6..677e57f 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5LibraryException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5LibraryException.java
@@ -17,14 +17,16 @@ import hdf.hdf5lib.H5;
 import hdf.hdf5lib.HDF5Constants;
 
 /**
- * <p>
+ * @page ERRORSLIB HDF5 Library Errors and Exceptions
  * The class HDF5LibraryException returns errors raised by the HDF5 library.
- * <p>
- * Each major error code from the HDF-5 Library is represented by a sub-class of
+ *
+ * Each major error code from the HDF5 Library is represented by a sub-class of
  * this class, and by default the 'detailedMessage' is set according to the
- * minor error code from the HDF-5 Library.
+ * minor error code from the HDF5 Library.
  * <p>
- * For major and minor error codes, see <b>H5Epublic.h</b> in the HDF-5 library.
+ * For major and minor error codes, @see <b>@ref H5E</b> in the HDF5 library.
+ *
+ * @defgroup JERRLIB HDF5 Library JNI Exception Interface
  *
  */
 
@@ -36,6 +38,8 @@ public class HDF5LibraryException extends HDF5Exception {
     private final long minorErrorNumber;
 
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5LibraryException</code> with no specified detail
      * message.
      */
@@ -43,7 +47,7 @@ public class HDF5LibraryException extends HDF5Exception {
     {
         super();
 
-        // this code forces the loading of the HDF-5 library
+        // this code forces the loading of the HDF5 library
         // to assure that the native methods are available
         try {
             H5.H5open();
@@ -57,6 +61,8 @@ public class HDF5LibraryException extends HDF5Exception {
     }
 
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5LibraryException</code> with the specified detail
      * message.
      *
@@ -66,7 +72,7 @@ public class HDF5LibraryException extends HDF5Exception {
     public HDF5LibraryException(String s)
     {
         super(s);
-        // this code forces the loading of the HDF-5 library
+        // this code forces the loading of the HDF5 library
         // to assure that the native methods are available
         try {
             H5.H5open();
@@ -78,6 +84,8 @@ public class HDF5LibraryException extends HDF5Exception {
     }
 
     /**
+     * @ingroup JERRLIB
+     *
      * Get the major error number of the first error on the HDF5 library error
      * stack.
      *
@@ -87,6 +95,8 @@ public class HDF5LibraryException extends HDF5Exception {
     private native long _getMajorErrorNumber();
 
     /**
+     * @ingroup JERRLIB
+     *
      * Get the minor error number of the first error on the HDF5 library error
      * stack.
      *
@@ -96,9 +106,11 @@ public class HDF5LibraryException extends HDF5Exception {
     private native long _getMinorErrorNumber();
 
     /**
+     * @ingroup JERRLIB
+     *
      * Return a error message for the minor error number.
-     * <p>
-     * These messages come from <b>H5Epublic.h</b>.
+     *
+     * These messages come from <b>@ref H5E</b>.
      *
      * @param err_code
      *            the error code
@@ -346,19 +358,23 @@ public class HDF5LibraryException extends HDF5Exception {
     }
 
     /**
-     * Prints this <code>HDF5LibraryException</code>, the HDF-5 Library error
+     * @ingroup JERRLIB
+     *
+     * Prints this <code>HDF5LibraryException</code>, the HDF5 Library error
      * stack, and and the Java stack trace to the standard error stream.
      */
     @Override
     public void printStackTrace()
     {
         System.err.println(this);
-        printStackTrace0(null);  // the HDF-5 Library error stack
+        printStackTrace0(null);  // the HDF5 Library error stack
         super.printStackTrace(); // the Java stack trace
     }
 
     /**
-     * Prints this <code>HDF5LibraryException</code> the HDF-5 Library error
+     * @ingroup JERRLIB
+     *
+     * Prints this <code>HDF5LibraryException</code> the HDF5 Library error
      * stack, and and the Java stack trace to the specified print stream.
      *
      * @param f
@@ -379,14 +395,14 @@ public class HDF5LibraryException extends HDF5Exception {
             catch (Exception ex) {
                 System.err.println(this);
             };
-            // the HDF-5 Library error stack
+            // the HDF5 Library error stack
             printStackTrace0(f.getPath());
             super.printStackTrace(); // the Java stack trace
         }
     }
 
     /*
-     * This private method calls the HDF-5 library to extract the error codes
+     * This private method calls the HDF5 library to extract the error codes
      * and error stack.
      */
     private native void printStackTrace0(String s);
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5LowLevelIOException.java b/java/src/hdf/hdf5lib/exceptions/HDF5LowLevelIOException.java
index fef5721..719748e 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5LowLevelIOException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5LowLevelIOException.java
@@ -16,17 +16,21 @@ package hdf.hdf5lib.exceptions;
 /**
  * The class HDF5LibraryException returns errors raised by the HDF5 library.
  * <p>
- * This sub-class represents HDF-5 major error code <b>H5E_IO</b>
+ * This sub-class represents HDF5 major error code <b>H5E_IO</b>
  */
 
 public class HDF5LowLevelIOException extends HDF5LibraryException {
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5LowLevelIOException</code> with no specified
      * detail message.
      */
     public HDF5LowLevelIOException() { super(); }
 
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5LowLevelIOException</code> with the specified
      * detail message.
      *
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5MetaDataCacheException.java b/java/src/hdf/hdf5lib/exceptions/HDF5MetaDataCacheException.java
index 4f00006..298d8b8 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5MetaDataCacheException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5MetaDataCacheException.java
@@ -16,17 +16,21 @@ package hdf.hdf5lib.exceptions;
 /**
  * The class HDF5LibraryException returns errors raised by the HDF5 library.
  * <p>
- * This sub-class represents HDF-5 major error code <b>H5E_CACHE</b>
+ * This sub-class represents HDF5 major error code <b>H5E_CACHE</b>
  */
 
 public class HDF5MetaDataCacheException extends HDF5LibraryException {
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5MetaDataCacheException</code> with no specified
      * detail message.
      */
     public HDF5MetaDataCacheException() { super(); }
 
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5MetaDataCacheException</code> with the specified
      * detail message.
      *
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5ObjectHeaderException.java b/java/src/hdf/hdf5lib/exceptions/HDF5ObjectHeaderException.java
index 9675354..b6e94be 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5ObjectHeaderException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5ObjectHeaderException.java
@@ -16,17 +16,21 @@ package hdf.hdf5lib.exceptions;
 /**
  * The class HDF5LibraryException returns errors raised by the HDF5 library.
  * <p>
- * This sub-class represents HDF-5 major error code <b>H5E_OHDR</b>
+ * This sub-class represents HDF5 major error code <b>H5E_OHDR</b>
  */
 
 public class HDF5ObjectHeaderException extends HDF5LibraryException {
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5ObjectHeaderException</code> with no specified
      * detail message.
      */
     public HDF5ObjectHeaderException() { super(); }
 
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5ObjectHeaderException</code> with the specified
      * detail message.
      *
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5PropertyListInterfaceException.java b/java/src/hdf/hdf5lib/exceptions/HDF5PropertyListInterfaceException.java
index 66f0bd1..68d581f 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5PropertyListInterfaceException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5PropertyListInterfaceException.java
@@ -16,17 +16,21 @@ package hdf.hdf5lib.exceptions;
 /**
  * The class HDF5LibraryException returns errors raised by the HDF5 library.
  * <p>
- * This sub-class represents HDF-5 major error code <b>H5E_PLIST</b>
+ * This sub-class represents HDF5 major error code <b>H5E_PLIST</b>
  */
 
 public class HDF5PropertyListInterfaceException extends HDF5LibraryException {
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5PropertyListInterfaceException</code> with no
      * specified detail message.
      */
     public HDF5PropertyListInterfaceException() { super(); }
 
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5PropertyListInterfaceException</code> with the
      * specified detail message.
      *
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5ReferenceException.java b/java/src/hdf/hdf5lib/exceptions/HDF5ReferenceException.java
index 4feaba7..4c96136 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5ReferenceException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5ReferenceException.java
@@ -16,17 +16,21 @@ package hdf.hdf5lib.exceptions;
 /**
  * The class HDF5LibraryException returns errors raised by the HDF5 library.
  * <p>
- * This sub-class represents HDF-5 major error code <b>H5E_REFERENCE</b>
+ * This sub-class represents HDF5 major error code <b>H5E_REFERENCE</b>
  */
 
 public class HDF5ReferenceException extends HDF5LibraryException {
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5ReferenceException</code> with no specified
      * detail message.
      */
     public HDF5ReferenceException() { super(); }
 
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5ReferenceException</code> with the specified
      * detail message.
      *
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5ResourceUnavailableException.java b/java/src/hdf/hdf5lib/exceptions/HDF5ResourceUnavailableException.java
index 1a007e7..f920c53 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5ResourceUnavailableException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5ResourceUnavailableException.java
@@ -16,17 +16,21 @@ package hdf.hdf5lib.exceptions;
 /**
  * The class HDF5LibraryException returns errors raised by the HDF5 library.
  * <p>
- * This sub-class represents HDF-5 major error code <b>H5E_RESOURCE</b>
+ * This sub-class represents HDF5 major error code <b>H5E_RESOURCE</b>
  */
 
 public class HDF5ResourceUnavailableException extends HDF5LibraryException {
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5ResourceUnavailableException</code> with no
      * specified detail message.
      */
     public HDF5ResourceUnavailableException() { super(); }
 
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5FunctionArgumentException</code> with the
      * specified detail message.
      *
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5SymbolTableException.java b/java/src/hdf/hdf5lib/exceptions/HDF5SymbolTableException.java
index 4fb8c2e..5d3aa90 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5SymbolTableException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5SymbolTableException.java
@@ -16,17 +16,21 @@ package hdf.hdf5lib.exceptions;
 /**
  * The class HDF5LibraryException returns errors raised by the HDF5 library.
  * <p>
- * This sub-class represents HDF-5 major error code <b>H5E_SYM</b>
+ * This sub-class represents HDF5 major error code <b>H5E_SYM</b>
  */
 
 public class HDF5SymbolTableException extends HDF5LibraryException {
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5SymbolTableException</code> with no specified
      * detail message.
      */
     public HDF5SymbolTableException() { super(); }
 
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5SymbolTableException</code> with the specified
      * detail message.
      *
diff --git a/java/src/hdf/hdf5lib/exceptions/package-info.java b/java/src/hdf/hdf5lib/exceptions/package-info.java
index 8640ccb..2ac7806 100644
--- a/java/src/hdf/hdf5lib/exceptions/package-info.java
+++ b/java/src/hdf/hdf5lib/exceptions/package-info.java
@@ -12,6 +12,7 @@
  * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
 
 /**
+ * @page ERRORS_UG Errors and Exceptions
  * <p>
  * The package exceptions contains error classes for the Java HDF5 Interface.
  * <p>
diff --git a/java/src/hdf/hdf5lib/package-info.java b/java/src/hdf/hdf5lib/package-info.java
index c04b862..7ae4df9 100644
--- a/java/src/hdf/hdf5lib/package-info.java
+++ b/java/src/hdf/hdf5lib/package-info.java
@@ -12,10 +12,11 @@
  * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
 
 /**
+ @page HDF5LIB_UG HDF5 Java Package
  * This package is the Java interface for the HDF5 library.
  * <p>
- * This code is the called by Java programs to access the entry points of the HDF5 library. Each routine wraps
- a single
+ * This code is the called by Java programs to access the entry points of the HDF5 library.
+ * Each routine wraps a single
  * HDF5 entry point, generally with the arguments and return codes analogous to the C interface.
  * <p>
  * For details of the HDF5 library, see the HDF5 Documentation at:
@@ -25,14 +26,13 @@
  * <b>Mapping of arguments for Java</b>
  *
  * <p>
- * In general, arguments to the HDF Java API are straightforward translations from the 'C' API described in
- the HDF
- * Reference Manual.
+ * In general, arguments to the HDF Java API are straightforward translations from the 'C' API described
+ * in the HDF Reference Manual.
  *
  * <table border=1>
- * <caption><b>HDF-5 C types to Java types</b> </caption>
+ * <caption><b>HDF5 C types to Java types</b> </caption>
  * <tr>
- * <td><b>HDF-5</b></td>
+ * <td><b>HDF5</b></td>
  * <td><b>Java</b></td>
  * </tr>
  * <tr>
@@ -60,28 +60,27 @@
  * <td>java.lang.String</td>
  * </tr>
  * <tr>
- * <td>void * <BR>
+ * <td>void * <br />
  * (i.e., pointer to `Any')</td>
  * <td>Special -- see HDFArray</td>
  * </tr>
  * </table>
  * <b>General Rules for Passing Arguments and Results</b>
  * <p>
- * In general, arguments passed <b>IN</b> to Java are the analogous basic types, as above. The exception is
- for arrays,
- * which are discussed below.
+ * In general, arguments passed <b>IN</b> to Java are the analogous basic types, as above. The exception
+ * is for arrays, which are discussed below.
  * <p>
  * The <i>return value</i> of Java methods is also the analogous type, as above. A major exception to that
- rule is that
+ * rule is that
  * all HDF functions that return SUCCEED/FAIL are declared <i>boolean</i> in the Java version, rather than
- <i>int</i> as
+ * <i>int</i> as
  * in the C. Functions that return a value or else FAIL are declared the equivalent to the C function.
- However, in most
+ * However, in most
  * cases the Java method will raise an exception instead of returning an error code.
- * See <a href="#ERRORS">Errors and Exceptions</a> below.
+ * @see @ref ERRORS.
  * <p>
  * Java does not support pass by reference of arguments, so arguments that are returned through <b>OUT</b>
- parameters
+ * parameters
  * must be wrapped in an object or array. The Java API for HDF consistently wraps arguments in arrays.
  * <p>
  * For instance, a function that returns two integers is declared:
@@ -104,12 +103,12 @@
  *
  * <p>
  * All the routines where this convention is used will have specific documentation of the details, given
- below.
+ * below.
  * <p>
  * <b>Arrays</b>
  * <p>
  * HDF5 needs to read and write multi-dimensional arrays of any number type (and records). The HDF5 API
- describes the
+ * describes the
  * layout of the source and destination, and the data for the array passed as a block of bytes, for instance,
  *
  * <pre>
@@ -118,52 +117,52 @@
  *
  * <p>
  * where ``void *'' means that the data may be any valid numeric type, and is a contiguous block of bytes that
- is the
+ * is the
  * data for a multi-dimensional array. The other parameters describe the dimensions, rank, and datatype of the
- array on
+ * array on
  * disk (source) and in memory (destination).
  * <p>
  * For Java, this ``ANY'' is a problem, as the type of data must always be declared. Furthermore,
- multidimensional
+ * multidimensional
  * arrays are definitely <i>not</i> laid out contiguously in memory. It would be infeasible to declare a
- separate
+ * separate
  * routine for every combination of number type and dimensionality. For that reason, the
- *  <a href="./hdf.hdf5lib.HDFArray.html"><b>HDFArray</b></a> class is used to discover the type, shape, and
- size of the
+ *  <a href="./HDFArray.html"><b>HDFArray</b></a> class is used to discover the type, shape, and
+ * size of the
  * data array at run time, and to convert to and from a contiguous array of bytes in synchronized static
- native C order.
+ * native C order.
  * <p>
  * The upshot is that any Java array of numbers (either primitive or sub-classes of type <b>Number</b>) can be
- passed as
+ * passed as
  * an ``Object'', and the Java API will translate to and from the appropriate packed array of bytes needed by
- the C
+ * the C
  * library. So the function above would be declared:
  *
  * <pre>
  * public synchronized static native int H5Dread(long fid, long filetype, long memtype, long memspace, Object
- data);
+ * data);
  * </pre>
  *            OPEN_IDS.addElement(id);
 
  * and the parameter <i>data</i> can be any multi-dimensional array of numbers, such as float[][], or
- int[][][], or
+ * int[][][], or
  * Double[][].
  * <p>
- * <b>HDF-5 Constants</b>
+ * <b>HDF5 Constants</b>
  * <p>
- * The HDF-5 API defines a set of constants and enumerated values. Most of these values are available to Java
- programs
- * via the class <a href="./hdf.hdf5lib.HDF5Constants.html"> <b>HDF5Constants</b></a>. For example, the
- parameters for
+ * The HDF5 API defines a set of constants and enumerated values. Most of these values are available to Java
+ * programs
+ * via the class <a href="./HDF5Constants.html"> <b>HDF5Constants</b></a>. For example, the
+ * parameters for
  * the h5open() call include two numeric values, <b><i>HDFConstants.H5F_ACC_RDWR</i></b> and
  * <b><i>HDF5Constants.H5P_DEFAULT</i></b>. As would be expected, these numbers correspond to the C constants
  * <b><i>H5F_ACC_RDWR</i></b> and <b><i>H5P_DEFAULT</i></b>.
  * <p>
- * The HDF-5 API defines a set of values that describe number types and sizes, such as "H5T_NATIVE_INT" and
- "hsize_t".
- * These values are determined at run time by the HDF-5 C library. To support these parameters, the Java class
- * <a href="./hdf.hdf5lib.HDF5CDataTypes.html"> <b>HDF5CDataTypes</b></a> looks up the values when initiated.
- The values
+ * The HDF5 API defines a set of values that describe number types and sizes, such as "H5T_NATIVE_INT" and
+ * "hsize_t".
+ * These values are determined at run time by the HDF5 C library. To support these parameters, the Java class
+ * <a href="./HDF5CDataTypes.html"> <b>HDF5CDataTypes</b></a> looks up the values when initiated.
+ * The values
  * can be accessed as public variables of the Java class, such as:
  *
  * <pre>
@@ -175,31 +174,30 @@
  * <p>
  * <b>Error handling and Exceptions</b>
  * <p>
- * The HDF5 error API (H5E) manages the behavior of the error stack in the HDF-5 library. This API is
- available from the
+ * The HDF5 error API (H5E) manages the behavior of the error stack in the HDF5 library. This API is
+ * available from the
  * JHI5. Errors are converted into Java exceptions. This is totally different from the C interface, but is
- very natural
+ * very natural
  * for Java programming.
  * <p>
  * The exceptions of the JHI5 are organized as sub-classes of the class
- * <a href="./hdf.hdf5lib.exceptions.HDF5Exception.html"> <b>HDF5Exception</b></a>. There are two subclasses
- of
- * <b>HDF5Exception</b>, <a href="./hdf.hdf5lib.exceptions.HDF5LibraryException.html">
- <b>HDF5LibraryException</b></a>
- * and <a href="./hdf.hdf5lib.exceptions.HDF5JavaException.html"> <b>HDF5JavaException</b></a>. The
- sub-classes of the
- * former represent errors from the HDF-5 C library, while sub-classes of the latter represent errors in the
- JHI5
- * wrapper and support code.
- * <p>
- * The super-class <b><i>HDF5LibraryException</i></b> implements the method '<b><i>printStackTrace()</i></b>',
- which
- * prints out the HDF-5 error stack, as described in the HDF-5 C API <i><b>H5Eprint()</b>.</i> This may be
- used by Java
- * exception handlers to print out the HDF-5 error stack.
+ * <a href="./HDF5Exception.html"> <b>HDF5Exception</b></a>. There are two subclasses
+ * of
+ * <b>HDF5Exception</b>, @ref ERRORSLIB <b>HDF5LibraryException</b>
+ * and @ref ERRORSJAVA <b>HDF5JavaException</b>.
+ * The sub-classes of the former represent errors from the HDF5 C library,
+ * while sub-classes of the latter represent errors in the JHI5 wrapper and support code.
+ * <p>
+ * The super-class <b><i>HDF5LibraryException</i></b> implements the method
+ * '<b><i>printStackTrace()</i></b>', which prints out the HDF5 error stack, as described
+ *  in the HDF5 C API <i><b>@ref H5Eprint()</b>.</i> This may be
+ * used by Java
+ * exception handlers to print out the HDF5 error stack.
  * <hr>
  *
- * <b>See also: <a href="http://hdfgroup.org/HDF5/"> http://hdfgroup.org/HDF5"</a></b>
+ * @ref HDF5LIB
+ *
+ * <b>@see: <a href="http://hdfgroup.org/HDF5/"> HDF5"</a></b>
  *
  */
 package hdf.hdf5lib;
diff --git a/java/src/hdf/overview.html b/java/src/hdf/overview.html
index e3a032b..4d40a0e 100644
--- a/java/src/hdf/overview.html
+++ b/java/src/hdf/overview.html
@@ -4,7 +4,7 @@
 
 <h2><u>What it is</u></h2>
 The <b>Java HD5 Interface (JHI5)</b> is a Java package
-(<a href="../../hdf-java-html/javadocs/hdf/hdf5lib/package-summary.html">hdf.hdf5lib</a>)
+(<a href="./hdf/hdf5lib/package-summary.html">hdf.hdf5lib</a>)
 that ``wraps around'' the HDF5 library.
 <p>There are a large number of functions in the HDF5
 library (version 1.10). Some of the functions are not supported in JHI5. Most
@@ -32,7 +32,7 @@ library contains C functions which implement the native methods. The C
 functions call the standard HDF5 library, which is linked as part of the
 same library on most platforms.
 <p>The central part of the JHI5 is the Java class <i>
-<a href="../../hdf-java-html/javadocs/hdf/hdf5lib/H5.html">hdf.hdf5lib.H5</a></i>.
+<a href="./hdf/hdf5lib/H5.html">hdf.hdf5lib.H5</a></i>.
 The <i>H5 </i>class calls the standard (<i>i.e.</i>, `native' code) HDF5
 library, with native methods for most of the HDF5 functions.
 
@@ -42,11 +42,11 @@ The JHI5 is used by Java classes to call the HDF5 library, in order to
 create HDF5 files, and read and write data in existing HDF5 files.
 <p>For example, the HDF5 library has the function <b>H5Fopen</b> to open
 an HDF5 file. The Java interface is the class <i>
-<a href="../../hdf-java-html/javadocs/hdf/hdf5lib/H5.html">hdf.hdf5lib.H5</a></i>,
+<a href="./hdf/hdf5lib/H5.html">hdf.hdf5lib.H5</a></i>,
 which has a method:
 <pre><b>static native int H5Fopen(String filename, int flags, int access );</b></pre>
 The native method is implemented in C using the
-<a href="http://java.sun.com/javase/6/docs/technotes/guides/jni/index.html">Java
+<a href="https://docs.oracle.com/en/java/javase/18/docs/specs/jni/index.html">Java
 Native Method Interface </a>(JNI). This is written something like the following:
 <pre><b>JNIEXPORT jlong
 JNICALL Java_hdf_hdf5lib_H5_H5Fopen
diff --git a/java/src/jni/exceptionImp.c b/java/src/jni/exceptionImp.c
index a772ae2..1d27e1b 100644
--- a/java/src/jni/exceptionImp.c
+++ b/java/src/jni/exceptionImp.c
@@ -153,7 +153,7 @@ Java_hdf_hdf5lib_H5_H5error_1on(JNIEnv *env, jclass clss)
  * Method:    printStackTrace0
  * Signature: (Ljava/lang/Object;)V
  *
- *  Call the HDF-5 library to print the HDF-5 error stack to 'file_name'.
+ *  Call the HDF5 library to print the HDF5 error stack to 'file_name'.
  */
 JNIEXPORT void JNICALL
 Java_hdf_hdf5lib_exceptions_HDF5LibraryException_printStackTrace0(JNIEnv *env, jobject obj, jstring file_name)
@@ -187,7 +187,7 @@ done:
  * Method:    _getMajorErrorNumber
  * Signature: ()J
  *
- *  Extract the HDF-5 major error number from the HDF-5 error stack.
+ *  Extract the HDF5 major error number from the HDF5 error stack.
  */
 JNIEXPORT jlong JNICALL
 Java_hdf_hdf5lib_exceptions_HDF5LibraryException__1getMajorErrorNumber(JNIEnv *env, jobject obj)
@@ -211,7 +211,7 @@ Java_hdf_hdf5lib_exceptions_HDF5LibraryException__1getMajorErrorNumber(JNIEnv *e
  * Method:    _getMinorErrorNumber
  * Signature: ()J
  *
- *  Extract the HDF-5 minor error number from the HDF-5 error stack.
+ *  Extract the HDF5 minor error number from the HDF5 error stack.
  */
 JNIEXPORT jlong JNICALL
 Java_hdf_hdf5lib_exceptions_HDF5LibraryException__1getMinorErrorNumber(JNIEnv *env, jobject obj)
@@ -350,10 +350,10 @@ h5raiseException(JNIEnv *env, const char *message, const char *exception)
 } /* end h5raiseException() */
 
 /*
- *  h5libraryError()   determines the HDF-5 major error code
+ *  h5libraryError()   determines the HDF5 major error code
  *  and creates and throws the appropriate sub-class of
  *  HDF5LibraryException().  This routine should be called
- *  whenever a call to the HDF-5 library fails, i.e., when
+ *  whenever a call to the HDF5 library fails, i.e., when
  *  the return is -1.
  *
  *  Note:  This routine never returns from the 'throw',
@@ -436,7 +436,7 @@ done:
 
 /*
  *  defineHDF5LibraryException()  returns the name of the sub-class
- *  which goes with an HDF-5 error code.
+ *  which goes with an HDF5 error code.
  */
 static const char *
 defineHDF5LibraryException(hid_t maj_num)
diff --git a/java/src/jni/exceptionImp.h b/java/src/jni/exceptionImp.h
index 38469df..c7375e7 100644
--- a/java/src/jni/exceptionImp.h
+++ b/java/src/jni/exceptionImp.h
@@ -41,7 +41,7 @@ JNIEXPORT void JNICALL Java_hdf_hdf5lib_H5_H5error_1on(JNIEnv *env, jclass clss)
  * Method:    printStackTrace0
  * Signature: (Ljava/lang/Object;)V
  *
- *  Call the HDF-5 library to print the HDF-5 error stack to 'file_name'.
+ *  Call the HDF5 library to print the HDF5 error stack to 'file_name'.
  */
 JNIEXPORT void JNICALL Java_hdf_hdf5lib_exceptions_HDF5LibraryException_printStackTrace0(JNIEnv *env,
                                                                                          jobject obj,
diff --git a/src/H5Amodule.h b/src/H5Amodule.h
index cab56d4..e3bfe6f 100644
--- a/src/H5Amodule.h
+++ b/src/H5Amodule.h
@@ -375,7 +375,7 @@
  *
  * Previous Chapter \ref sec_dataspace - Next Chapter \ref sec_error
  *
- * \defgroup H5A H5A
+ * \defgroup H5A Attributes (H5A)
  *
  * An HDF5 attribute is a small metadata object describing the nature and/or intended usage of a primary data
  * object. A primary data object may be a dataset, group, or committed datatype.
diff --git a/src/H5Dmodule.h b/src/H5Dmodule.h
index 0eb7d68..4ad3709 100644
--- a/src/H5Dmodule.h
+++ b/src/H5Dmodule.h
@@ -2730,7 +2730,7 @@ allocated if necessary.
  *     // Define dataset datatype
  *     datatype = H5Tcopy(H5T_NATIVE_INT);
  *
- *     // Initiliaze data buffer
+ *     // Initialize data buffer
  *     for (i=0; i < NX; i++)
  *       for (j=0; j < NY; j++)
  *         orig_data[i][j] = rand() % 10000;
@@ -2851,7 +2851,7 @@ allocated if necessary.
  *     // Define dataset datatype
  *     datatype = H5Tcopy(H5T_NATIVE_FLOAT);
  *
- *     // Initiliaze data buffer
+ *     // Initialize data buffer
  *     for (i=0; i < NX; i++)
  *       for (j=0; j < NY; j++)
  *         orig_data[i][j] = (rand() % 10000) / 1000.0;
@@ -2983,7 +2983,7 @@ allocated if necessary.
  */
 
 /**
- * \defgroup H5D H5D
+ * \defgroup H5D Datasets (H5D)
  *
  * Use the functions in this module to manage HDF5 datasets, including the
  * transfer of data between memory and disk and the description of dataset
diff --git a/src/H5Emodule.h b/src/H5Emodule.h
index aeba66d..f2e6d44 100644
--- a/src/H5Emodule.h
+++ b/src/H5Emodule.h
@@ -580,7 +580,7 @@
  *
  * Previous Chapter \ref sec_attribute - Next Chapter \ref sec_plist
  *
- * \defgroup H5E H5E
+ * \defgroup H5E Error Handling (H5E)
  *
  * \internal The \c FUNC_ENTER macro clears the error stack whenever an
  *           interface function is entered. When an error is detected, an entry
diff --git a/src/H5Fmodule.h b/src/H5Fmodule.h
index 0aba5cd..523d6bf 100644
--- a/src/H5Fmodule.h
+++ b/src/H5Fmodule.h
@@ -1470,7 +1470,7 @@
  */
 
 /**
- * \defgroup H5F H5F
+ * \defgroup H5F Files (H5F)
  *
  * Use the functions in this module to manage HDF5 files.
  *
diff --git a/src/H5Gmodule.h b/src/H5Gmodule.h
index 13589fd..a112a40 100644
--- a/src/H5Gmodule.h
+++ b/src/H5Gmodule.h
@@ -951,7 +951,7 @@
  */
 
 /**
- * \defgroup H5G H5G
+ * \defgroup H5G Groups (H5G)
  *
  * Use the functions in this module to manage HDF5 groups.
  *
diff --git a/src/H5Imodule.h b/src/H5Imodule.h
index 024d8ab..1ad9f1b 100644
--- a/src/H5Imodule.h
+++ b/src/H5Imodule.h
@@ -30,7 +30,7 @@
 #define H5_MY_PKG_INIT NO
 
 /**
- * \defgroup H5I H5I
+ * \defgroup H5I Identifiers (H5I)
  *
  * Use the functions in this module to manage identifiers defined by the HDF5
  * library. See \ref H5IUD for user-defined identifiers and identifier
diff --git a/src/H5Lmodule.h b/src/H5Lmodule.h
index 47c8ad1..f61b891 100644
--- a/src/H5Lmodule.h
+++ b/src/H5Lmodule.h
@@ -30,7 +30,7 @@
 #define H5_MY_PKG_INIT YES
 
 /**
- * \defgroup H5L H5L
+ * \defgroup H5L Links (H5L)
  *
  * Use the functions in this module to manage HDF5 links and link types.
  *
diff --git a/src/H5Omodule.h b/src/H5Omodule.h
index 866e3b4..977861b 100644
--- a/src/H5Omodule.h
+++ b/src/H5Omodule.h
@@ -30,7 +30,7 @@
 #define H5_MY_PKG_INIT YES
 
 /**
- * \defgroup H5O H5O
+ * \defgroup H5O Objects (H5O)
  *
  * Use the functions in this module to manage HDF5 objects.
  *
diff --git a/src/H5PLmodule.h b/src/H5PLmodule.h
index 94cbf49..84d3583 100644
--- a/src/H5PLmodule.h
+++ b/src/H5PLmodule.h
@@ -28,7 +28,7 @@
 #define H5_MY_PKG_INIT YES
 
 /**
- * \defgroup H5PL H5PL
+ * \defgroup H5PL Dynamically-loaded Plugins (H5PL)
  *
  * Use the functions in this module to manage the loading behavior of HDF5
  * plugins.
diff --git a/src/H5Pmodule.h b/src/H5Pmodule.h
index 7885782..0dd675a 100644
--- a/src/H5Pmodule.h
+++ b/src/H5Pmodule.h
@@ -882,7 +882,7 @@
  *
  * Previous Chapter \ref sec_error - Next Chapter \ref sec_addition
  *
- * \defgroup H5P H5P
+ * \defgroup H5P Property Lists (H5P)
  *
  * Use the functions in this module to manage HDF5 property lists and property
  * list classes. HDF5 property lists are the main vehicle to configure the
@@ -915,25 +915,25 @@
  * </table>
  *
  * \defgroup STRCPL String Creation Properties
- * \ingroup H5P
  * Currently, there are only two creation properties that you can use to control
  * the creation of HDF5 attributes and links. The first creation property, the
  * choice of a character encoding, applies to both attributes and links.
  * The second creation property applies to links only, and advises the library
  * to automatically create missing intermediate groups when creating new objects.
+ * \ingroup H5P
  *
  * \defgroup LCPL Link Creation Properties
- * \ingroup STRCPL
  * The first creation property, the choice of a character encoding, applies to
  * both attributes and links.
  * The second creation property applies to links only, and advises the library
  * to automatically create missing intermediate groups when creating new objects.
+ * \ingroup STRCPL
  *
  * @see STRCPL
  *
  * \defgroup ACPL Attribute Creation Properties
- * \ingroup STRCPL
  * The creation property, the choice of a character encoding, applies to attributes.
+ * \ingroup STRCPL
  *
  * @see STRCPL
  *
@@ -941,110 +941,68 @@
  * \ingroup H5P
  *
  * \defgroup DAPL Dataset Access Properties
- * \ingroup LAPL
  * Use dataset access properties to modify the default behavior of the HDF5
  * library when accessing datasets. The properties include adjusting the size
  * of the chunk cache, providing prefixes for external content and virtual
  * dataset file paths, and controlling flush behavior, etc. These properties
  * are \Emph{not} persisted with datasets, and can be adjusted at runtime before
  * a dataset is created or opened.
+ * \ingroup LAPL
  *
  * \defgroup DCPL Dataset Creation Properties
- * \ingroup OCPL
  * Use dataset creation properties to control aspects of dataset creation such
  * as fill time, storage layout, compression methods, etc.
  * Unlike dataset access and transfer properties, creation properties \Emph{are}
  * stored with the dataset, and cannot be changed once a dataset has been
  * created.
+ * \ingroup OCPL
  *
  * \defgroup DXPL Dataset Transfer Properties
- * \ingroup H5P
  * Use dataset transfer properties to customize certain aspects of reading
  * and writing datasets such as transformations, MPI-IO I/O mode, error
  * detection, etc. These properties are \Emph{not} persisted with datasets,
  * and can be adjusted at runtime before a dataset is read or written.
+ * \ingroup H5P
  *
  * \defgroup FAPL File Access Properties
- * \ingroup H5P
  * Use file access properties to modify the default behavior of the HDF5
  * library when accessing files. The properties include selecting a virtual
  * file driver (VFD), configuring the metadata cache (MDC), control
  * file locking, etc. These properties are \Emph{not} persisted with files, and
  * can be adjusted at runtime before a file is created or opened.
+ * \ingroup H5P
  *
  * \defgroup FCPL File Creation Properties
- * \ingroup GCPL
  * Use file creation properties to control aspects of file creation such
  * as setting a file space management strategy or creating a user block.
  * Unlike file access properties, creation properties \Emph{are}
  * stored with the file, and cannot be changed once a file has been
  * created.
+ * \ingroup GCPL
  *
  * \defgroup GAPL General Access Properties
- * \ingroup LAPL
  * The functions in this section can be applied to different kinds of property
  * lists.
+ * \ingroup LAPL
  *
  * \defgroup GCPL Group Creation Properties
- * \ingroup OCPL
  * Use group creation properties to control aspects of group creation such
  * as storage layout, compression, and link creation order tracking.
  * Unlike file access properties, creation properties \Emph{are}
  * stored with the group, and cannot be changed once a group has been
  * created.
+ * \ingroup OCPL
  *
  * \defgroup PLCR Property List Class Root
- * \ingroup H5P
- *
  * Use the functions in this module to manage HDF5 property lists.
- *
- * <table>
- * <tr><th>Create</th><th>Read</th></tr>
- * <tr valign="top">
- *   <td>
- *   \snippet{lineno} H5P_examples.c create
- *   </td>
- *   <td>
- *   \snippet{lineno} H5P_examples.c read
- *   </td>
- * <tr><th>Update</th><th>Delete</th></tr>
- * <tr valign="top">
- *   <td>
- *   \snippet{lineno} H5P_examples.c update
- *   </td>
- *   <td>
- *   \snippet{lineno} H5P_examples.c delete
- *   </td>
- * </tr>
- * </table>
- *
- * \defgroup PLCRA Property List Class Root (Advanced)
  * \ingroup H5P
  *
+ * \defgroup PLCRA Property List Class Root (Advanced)
  * You can create and customize user-defined property list classes using the
  * functions described below. Arbitrary user-defined properties can also
  * be inserted into existing property lists as so-called temporary properties.
+ * \ingroup H5P
  *
- * <table>
- * <tr><th>Create</th><th>Read</th></tr>
- *
- * <tr valign="top">
- *   <td>
- *   \snippet{lineno} H5P_examples.c create_class
- *   </td>
- *   <td>
- *   \snippet{lineno} H5P_examples.c read_class
- *   </td>
- * <tr><th>Update</th><th>Delete</th></tr>
- * <tr valign="top">
- *   <td>
- *   \snippet{lineno} H5P_examples.c update_class
- *   </td>
- *   <td>
- *   \snippet{lineno} H5P_examples.c delete_class
- *   </td>
- * </tr>
- * </table>
  *
  * \defgroup OCPL Object Creation Properties
  * \ingroup H5P
@@ -1053,19 +1011,19 @@
  * \ingroup H5P
  *
  * \defgroup FMPL File Mount Properties
+ * Empty property class.
  * \ingroup H5P
  *
- * Empty property class.
  *
  * \defgroup TCPL Datatype Creation Properties
+ * TCPL isn't supported yet.
  * \ingroup OCPL
  *
- * TCPL isn't supported yet.
  *
  * \defgroup TAPL Datatype Access Properties
+ * TAPL isn't supported yet.
  * \ingroup LAPL
  *
- * TAPL isn't supported yet.
  *
  *
  */
diff --git a/src/H5Ppublic.h b/src/H5Ppublic.h
index 017b636..2890a5a 100644
--- a/src/H5Ppublic.h
+++ b/src/H5Ppublic.h
@@ -765,7 +765,7 @@ H5_DLL htri_t H5Pexist(hid_t plist_id, const char *name);
  */
 H5_DLL herr_t H5Pget(hid_t plist_id, const char *name, void *value);
 /**
- *\ingroup PLCR
+ * \ingroup PLCR
  *
  * \brief Returns the property list class identifier for a property list
  *
diff --git a/src/H5Rmodule.h b/src/H5Rmodule.h
index d467ffe..c561058 100644
--- a/src/H5Rmodule.h
+++ b/src/H5Rmodule.h
@@ -26,7 +26,7 @@
 #define H5_MY_PKG_INIT YES
 
 /**
- * \defgroup H5R H5R
+ * \defgroup H5R References (H5R)
  *
  * Use the functions in this module to manage HDF5 references. Referents can
  * be HDF5 objects, attributes, and selections on datasets a.k.a. dataset
diff --git a/src/H5Smodule.h b/src/H5Smodule.h
index 5eeba33..9c6682e 100644
--- a/src/H5Smodule.h
+++ b/src/H5Smodule.h
@@ -727,7 +727,7 @@
  * \li 3. Define a second hyperslab selection, unioned with the first
  * \li 4. Get the destination dataspace
  * \li 5. Define one hyperslab selection for the destination
- * \li 6. Define a second hyperslab seletion, unioned with the first
+ * \li 6. Define a second hyperslab selection, unioned with the first
  * \li 7. Execute the data transfer (H5Dread or H5Dwrite) using the source and destination dataspaces
  *
  * The example below shows example code to create the selections for the source dataspace (the file). The
@@ -1516,7 +1516,7 @@
  */
 
 /**
- * \defgroup H5S H5S
+ * \defgroup H5S Dataspaces (H5S)
  *
  * Use the functions in this module to manage HDF5 dataspaces \Emph{and} selections.
  *
diff --git a/src/H5Tmodule.h b/src/H5Tmodule.h
index a2f6828..83f7467 100644
--- a/src/H5Tmodule.h
+++ b/src/H5Tmodule.h
@@ -3859,7 +3859,7 @@ filled according to the value of this property. The padding can be:
  */
 
 /**
- * \defgroup H5T H5T
+ * \defgroup H5T Datatypes (H5T)
  *
  * Use the functions in this module to manage HDF5 datatypes.
  *
diff --git a/src/H5Zmodule.h b/src/H5Zmodule.h
index c3ef881..b3a52fd 100644
--- a/src/H5Zmodule.h
+++ b/src/H5Zmodule.h
@@ -30,7 +30,7 @@
 #define H5_MY_PKG_INIT YES
 
 /**
- * \defgroup H5Z H5Z
+ * \defgroup H5Z Filters (H5Z)
  *
  * Use the functions in this module to manage HDF5 filters.
  *
diff --git a/src/H5module.h b/src/H5module.h
index 6fadec8..6668624 100644
--- a/src/H5module.h
+++ b/src/H5module.h
@@ -1428,7 +1428,7 @@
  */
 
 /**
- * \defgroup H5 H5
+ * \defgroup H5 Library General (H5)
  *
  * Use the functions in this module to manage the life cycle of HDF5 library
  * instances.
diff --git a/src/H5private.h b/src/H5private.h
index 0601e73..a94049f 100644
--- a/src/H5private.h
+++ b/src/H5private.h
@@ -1983,7 +1983,7 @@ typedef struct H5_api_struct {
 #define H5_FIRST_THREAD_INIT pthread_once(&H5TS_first_init_g, H5TS_pthread_first_thread_init);
 #endif
 
-/* Macros for threadsafe HDF-5 Phase I locks */
+/* Macros for threadsafe HDF5 Phase I locks */
 #define H5_API_LOCK   H5TS_mutex_lock(&H5_g.init_lock);
 #define H5_API_UNLOCK H5TS_mutex_unlock(&H5_g.init_lock);