Merge pull request #1638 in HDFFV/hdf5 from ~BYRN/hdf5_adb:hdf5_1_10 to hdf5_1_10

* commit 'ca1165f3ab5121e433eb8ffa4de74e061c8b3cd1': Update java m4 scripts CMake fixes Update namespace handling Allow option to select NAMESPACE
author: Allen Byrne <byrn@hdfgroup.org> 2019-04-06 15:33:23 (GMT)
committer: Allen Byrne <byrn@hdfgroup.org> 2019-04-06 15:33:23 (GMT)
commit: 1fb34f7e8cb960bdf8132cd4cf63b5c7cf11a969 (patch)
tree: 24b60c102d5ad82392ba42f6cfb5b012dd39d971
parent: af7dc057890c8ddb9327e8bb7e93f78195152320 (diff)
parent: ca1165f3ab5121e433eb8ffa4de74e061c8b3cd1 (diff)
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hdf5-1fb34f7e8cb960bdf8132cd4cf63b5c7cf11a969.tar.gz
hdf5-1fb34f7e8cb960bdf8132cd4cf63b5c7cf11a969.tar.bz2
27 files changed, 146 insertions, 279 deletions
diff --git a/CMakeInstallation.cmake b/CMakeInstallation.cmake
index 7a0746a..3ae5b8b 100644
--- a/CMakeInstallation.cmake
+++ b/CMakeInstallation.cmake
@@ -33,7 +33,7 @@ if (NOT HDF5_EXTERNALLY_CONFIGURED)
         EXPORT ${HDF5_EXPORTED_TARGETS}
         DESTINATION ${HDF5_INSTALL_CMAKE_DIR}/hdf5
         FILE ${HDF5_PACKAGE}${HDF_PACKAGE_EXT}-targets.cmake
-        NAMESPACE ${HDF5_PACKAGE}::
+        NAMESPACE ${HDF_PACKAGE_NAMESPACE}
         COMPONENT configinstall
     )
   endif ()
@@ -45,7 +45,7 @@ if (NOT HDF5_EXTERNALLY_CONFIGURED)
     export (
         TARGETS ${HDF5_LIBRARIES_TO_EXPORT} ${HDF5_LIB_DEPENDENCIES} ${HDF5_UTILS_TO_EXPORT}
         FILE ${HDF5_PACKAGE}${HDF_PACKAGE_EXT}-targets.cmake
-        NAMESPACE ${HDF5_PACKAGE}::
+        NAMESPACE ${HDF_PACKAGE_NAMESPACE}
     )
   endif ()
 endif ()
diff --git a/CMakeLists.txt b/CMakeLists.txt
index 8cad454..a70ec4c 100644
--- a/CMakeLists.txt
+++ b/CMakeLists.txt
@@ -744,7 +744,7 @@ endif ()
 option (BUILD_TESTING "Build HDF5 Unit Testing" ON)
 if (BUILD_TESTING)
   set (DART_TESTING_TIMEOUT 1200
-      CACHE INTEGER
+      CACHE STRING
       "Timeout in seconds for each test (default 1200=20minutes)"
   )
 
diff --git a/config/cmake/cacheinit.cmake b/config/cmake/cacheinit.cmake
index d5c5e52..5254115 100644
--- a/config/cmake/cacheinit.cmake
+++ b/config/cmake/cacheinit.cmake
@@ -19,6 +19,8 @@ set (CMAKE_INSTALL_FRAMEWORK_PREFIX "Library/Frameworks" CACHE STRING "Framework
 
 set (HDF_PACKAGE_EXT "" CACHE STRING "Name of HDF package extension" FORCE)
 
+set (HDF_PACKAGE_NAMESPACE "hdf5::" CACHE STRING "Name for HDF package namespace (can be empty)" FORCE)
+
 set (HDF5_BUILD_FORTRAN ON CACHE BOOL "Build FORTRAN support" FORCE)
 
 set (HDF5_BUILD_GENERATORS ON CACHE BOOL "Build Test Generators" FORCE)
diff --git a/config/cmake/hdf5-config.cmake.in b/config/cmake/hdf5-config.cmake.in
index b1ef0ac..d0f1d00 100644
--- a/config/cmake/hdf5-config.cmake.in
+++ b/config/cmake/hdf5-config.cmake.in
@@ -108,10 +108,10 @@ set (HDF5_VERSION_MINOR  @HDF5_VERSION_MINOR@)
 # project which has already built hdf5 as a subproject
 #-----------------------------------------------------------------------------
 if (NOT TARGET "@HDF5_PACKAGE@")
-  if (${HDF5_PACKAGE_NAME}_ENABLE_Z_LIB_SUPPORT AND ${HDF5_PACKAGE_NAME}_PACKAGE_EXTLIBS AND NOT TARGET "zlib")
+  if (${HDF5_PACKAGE_NAME}_ENABLE_Z_LIB_SUPPORT AND ${HDF5_PACKAGE_NAME}_PACKAGE_EXTLIBS)
     include (@PACKAGE_SHARE_INSTALL_DIR@/@ZLIB_PACKAGE_NAME@/@ZLIB_PACKAGE_NAME@@HDF_PACKAGE_EXT@-targets.cmake)
   endif ()
-  if (${HDF5_PACKAGE_NAME}_ENABLE_SZIP_SUPPORT AND ${HDF5_PACKAGE_NAME}_PACKAGE_EXTLIBS AND NOT TARGET "szip")
+  if (${HDF5_PACKAGE_NAME}_ENABLE_SZIP_SUPPORT AND ${HDF5_PACKAGE_NAME}_PACKAGE_EXTLIBS)
     include (@PACKAGE_SHARE_INSTALL_DIR@/@SZIP_PACKAGE_NAME@/@SZIP_PACKAGE_NAME@@HDF_PACKAGE_EXT@-targets.cmake)
   endif ()
   include (@PACKAGE_SHARE_INSTALL_DIR@/@HDF5_PACKAGE@/@HDF5_PACKAGE@@HDF_PACKAGE_EXT@-targets.cmake)
diff --git a/config/cmake/mccacheinit.cmake b/config/cmake/mccacheinit.cmake
index 577144b..c35f51f 100644
--- a/config/cmake/mccacheinit.cmake
+++ b/config/cmake/mccacheinit.cmake
@@ -23,6 +23,8 @@ set (BUILD_TESTING ON CACHE BOOL "Build HDF5 Unit Testing" FORCE)
 
 set (HDF_PACKAGE_EXT "" CACHE STRING "Name of HDF package extension" FORCE)
 
+set (HDF_PACKAGE_NAMESPACE "hdf5::" CACHE STRING "Name for HDF package namespace" FORCE)
+
 set (HDF5_BUILD_CPP_LIB ON CACHE BOOL "Build HDF5 C++ Library" FORCE)
 
 set (HDF5_BUILD_EXAMPLES ON CACHE BOOL "Build HDF5 Library Examples" FORCE)
diff --git a/config/cmake_ext_mod/HDFLibMacros.cmake b/config/cmake_ext_mod/HDFLibMacros.cmake
index 2eda66c..9df2b4b 100644
--- a/config/cmake_ext_mod/HDFLibMacros.cmake
+++ b/config/cmake_ext_mod/HDFLibMacros.cmake
@@ -14,25 +14,7 @@ macro (EXTERNAL_JPEG_LIBRARY compress_type jpeg_pic)
   # May need to build JPEG with PIC on x64 machines with gcc
   # Need to use CMAKE_ANSI_CFLAGS define so that compiler test works
 
-  if (${compress_type} MATCHES "SVN")
-    EXTERNALPROJECT_ADD (JPEG
-        SVN_REPOSITORY ${JPEG_URL}
-        # [SVN_REVISION rev]
-        INSTALL_COMMAND ""
-        CMAKE_ARGS
-            -DBUILD_SHARED_LIBS:BOOL=${BUILD_SHARED_LIBS}
-            -DJPEG_PACKAGE_EXT:STRING=${HDF_PACKAGE_EXT}
-            -DJPEG_EXTERNALLY_CONFIGURED:BOOL=OFF
-            -DCMAKE_BUILD_TYPE:STRING=${CMAKE_BUILD_TYPE}
-            -DCMAKE_INSTALL_PREFIX:PATH=${CMAKE_INSTALL_PREFIX}
-            -DCMAKE_RUNTIME_OUTPUT_DIRECTORY:PATH=${CMAKE_RUNTIME_OUTPUT_DIRECTORY}
-            -DCMAKE_LIBRARY_OUTPUT_DIRECTORY:PATH=${CMAKE_LIBRARY_OUTPUT_DIRECTORY}
-            -DCMAKE_ARCHIVE_OUTPUT_DIRECTORY:PATH=${CMAKE_ARCHIVE_OUTPUT_DIRECTORY}
-            -DCMAKE_PDB_OUTPUT_DIRECTORY:PATH=${CMAKE_PDB_OUTPUT_DIRECTORY}
-            -DCMAKE_ANSI_CFLAGS:STRING=${jpeg_pic}
-            -DCMAKE_TOOLCHAIN_FILE:STRING=${CMAKE_TOOLCHAIN_FILE}
-    )
-  elseif (${compress_type} MATCHES "GIT")
+  if (${compress_type} MATCHES "GIT")
     EXTERNALPROJECT_ADD (JPEG
         GIT_REPOSITORY ${JPEG_URL}
         GIT_TAG ${JPEG_BRANCH}
@@ -49,6 +31,7 @@ macro (EXTERNAL_JPEG_LIBRARY compress_type jpeg_pic)
             -DCMAKE_PDB_OUTPUT_DIRECTORY:PATH=${CMAKE_PDB_OUTPUT_DIRECTORY}
             -DCMAKE_ANSI_CFLAGS:STRING=${jpeg_pic}
             -DCMAKE_TOOLCHAIN_FILE:STRING=${CMAKE_TOOLCHAIN_FILE}
+            -DPACKAGE_NAMESPACE=${HDF_PACKAGE_NAMESPACE}
     )
   elseif (${compress_type} MATCHES "TGZ")
     EXTERNALPROJECT_ADD (JPEG
@@ -67,23 +50,24 @@ macro (EXTERNAL_JPEG_LIBRARY compress_type jpeg_pic)
             -DCMAKE_PDB_OUTPUT_DIRECTORY:PATH=${CMAKE_PDB_OUTPUT_DIRECTORY}
             -DCMAKE_ANSI_CFLAGS:STRING=${jpeg_pic}
             -DCMAKE_TOOLCHAIN_FILE:STRING=${CMAKE_TOOLCHAIN_FILE}
+            -DPACKAGE_NAMESPACE=${HDF_PACKAGE_NAMESPACE}
     )
   endif ()
   externalproject_get_property (JPEG BINARY_DIR SOURCE_DIR)
 
 ##include (${BINARY_DIR}/${JPEG_PACKAGE_NAME}${HDF_PACKAGE_EXT}-targets.cmake)
 # Create imported target jpeg-static
-  add_library(jpeg-static STATIC IMPORTED)
-  HDF_IMPORT_SET_LIB_OPTIONS (jpeg-static "jpeg" STATIC "")
-  add_dependencies (jpeg-static JPEG)
-  set (JPEG_STATIC_LIBRARY "jpeg-static")
+  add_library(${HDF_PACKAGE_NAMESPACE}jpeg-static STATIC IMPORTED)
+  HDF_IMPORT_SET_LIB_OPTIONS (${HDF_PACKAGE_NAMESPACE}jpeg-static "jpeg" STATIC "")
+  add_dependencies (${HDF_PACKAGE_NAMESPACE}jpeg-static JPEG)
+  set (JPEG_STATIC_LIBRARY "${HDF_PACKAGE_NAMESPACE}jpeg-static")
   set (JPEG_LIBRARIES ${JPEG_STATIC_LIBRARY})
   if (BUILD_SHARED_LIBS)
     # Create imported target jpeg-shared
-    add_library(jpeg-shared SHARED IMPORTED)
-    HDF_IMPORT_SET_LIB_OPTIONS (jpeg-shared "jpeg" SHARED "")
-    add_dependencies (jpeg-shared JPEG)
-    set (JPEG_SHARED_LIBRARY "jpeg-shared")
+    add_library(${HDF_PACKAGE_NAMESPACE}jpeg-shared SHARED IMPORTED)
+    HDF_IMPORT_SET_LIB_OPTIONS (${HDF_PACKAGE_NAMESPACE}jpeg-shared "jpeg" SHARED "")
+    add_dependencies (${HDF_PACKAGE_NAMESPACE}jpeg-shared JPEG)
+    set (JPEG_SHARED_LIBRARY "${HDF_PACKAGE_NAMESPACE}jpeg-shared")
     set (JPEG_LIBRARIES ${JPEG_LIBRARIES} ${JPEG_SHARED_LIBRARY})
   endif ()
 
@@ -100,33 +84,14 @@ macro (PACKAGE_JPEG_LIBRARY compress_type)
       COMMENT "Copying ${JPEG_INCLUDE_DIR_GEN}/jconfig.h to ${CMAKE_RUNTIME_OUTPUT_DIRECTORY}/"
   )
   set (EXTERNAL_HEADER_LIST ${EXTERNAL_HEADER_LIST} ${CMAKE_RUNTIME_OUTPUT_DIRECTORY}/jconfig.h)
-  if (${compress_type} MATCHES "GIT" OR ${compress_type} MATCHES "SVN" OR ${compress_type} MATCHES "TGZ")
+  if (${compress_type} MATCHES "GIT" OR ${compress_type} MATCHES "TGZ")
     add_dependencies (JPEG-GenHeader-Copy JPEG)
   endif ()
 endmacro ()
 
 #-------------------------------------------------------------------------------
 macro (EXTERNAL_SZIP_LIBRARY compress_type encoding)
-  if (${compress_type} MATCHES "SVN")
-    EXTERNALPROJECT_ADD (SZIP
-        SVN_REPOSITORY ${SZIP_URL}
-        # [SVN_REVISION rev]
-        INSTALL_COMMAND ""
-        CMAKE_ARGS
-            -DBUILD_SHARED_LIBS:BOOL=${BUILD_SHARED_LIBS}
-            -DSZIP_PACKAGE_EXT:STRING=${HDF_PACKAGE_EXT}
-            -DSZIP_EXTERNALLY_CONFIGURED:BOOL=OFF
-            -DCMAKE_BUILD_TYPE:STRING=${CMAKE_BUILD_TYPE}
-            -DCMAKE_INSTALL_PREFIX:PATH=${CMAKE_INSTALL_PREFIX}
-            -DCMAKE_RUNTIME_OUTPUT_DIRECTORY:PATH=${CMAKE_RUNTIME_OUTPUT_DIRECTORY}
-            -DCMAKE_LIBRARY_OUTPUT_DIRECTORY:PATH=${CMAKE_LIBRARY_OUTPUT_DIRECTORY}
-            -DCMAKE_ARCHIVE_OUTPUT_DIRECTORY:PATH=${CMAKE_ARCHIVE_OUTPUT_DIRECTORY}
-            -DCMAKE_PDB_OUTPUT_DIRECTORY:PATH=${CMAKE_PDB_OUTPUT_DIRECTORY}
-            -DCMAKE_ANSI_CFLAGS:STRING=${CMAKE_ANSI_CFLAGS}
-            -DSZIP_ENABLE_ENCODING:BOOL=${encoding}
-            -DCMAKE_TOOLCHAIN_FILE:STRING=${CMAKE_TOOLCHAIN_FILE}
-    )
-  elseif (${compress_type} MATCHES "GIT")
+  if (${compress_type} MATCHES "GIT")
     EXTERNALPROJECT_ADD (SZIP
         GIT_REPOSITORY ${SZIP_URL}
         GIT_TAG ${SZIP_BRANCH}
@@ -144,6 +109,7 @@ macro (EXTERNAL_SZIP_LIBRARY compress_type encoding)
             -DCMAKE_ANSI_CFLAGS:STRING=${CMAKE_ANSI_CFLAGS}
             -DSZIP_ENABLE_ENCODING:BOOL=${encoding}
             -DCMAKE_TOOLCHAIN_FILE:STRING=${CMAKE_TOOLCHAIN_FILE}
+            -DPACKAGE_NAMESPACE=${HDF_PACKAGE_NAMESPACE}
     )
   elseif (${compress_type} MATCHES "TGZ")
     EXTERNALPROJECT_ADD (SZIP
@@ -163,23 +129,24 @@ macro (EXTERNAL_SZIP_LIBRARY compress_type encoding)
             -DCMAKE_ANSI_CFLAGS:STRING=${CMAKE_ANSI_CFLAGS}
             -DSZIP_ENABLE_ENCODING:BOOL=${encoding}
             -DCMAKE_TOOLCHAIN_FILE:STRING=${CMAKE_TOOLCHAIN_FILE}
+            -DPACKAGE_NAMESPACE=${HDF_PACKAGE_NAMESPACE}
     )
   endif ()
   externalproject_get_property (SZIP BINARY_DIR SOURCE_DIR)
 
 ##include (${BINARY_DIR}/${SZIP_PACKAGE_NAME}${HDF_PACKAGE_EXT}-targets.cmake)
 # Create imported target szip-static
-  add_library(szip-static STATIC IMPORTED)
-  HDF_IMPORT_SET_LIB_OPTIONS (szip-static "szip" STATIC "")
-  add_dependencies (szip-static SZIP)
-  set (SZIP_STATIC_LIBRARY "szip-static")
+  add_library(${HDF_PACKAGE_NAMESPACE}szip-static STATIC IMPORTED)
+  HDF_IMPORT_SET_LIB_OPTIONS (${HDF_PACKAGE_NAMESPACE}szip-static "szip" STATIC "")
+  add_dependencies (${HDF_PACKAGE_NAMESPACE}szip-static SZIP)
+  set (SZIP_STATIC_LIBRARY "${HDF_PACKAGE_NAMESPACE}szip-static")
   set (SZIP_LIBRARIES ${SZIP_STATIC_LIBRARY})
   if (BUILD_SHARED_LIBS)
     # Create imported target szip-shared
-    add_library(szip-shared SHARED IMPORTED)
-    HDF_IMPORT_SET_LIB_OPTIONS (szip-shared "szip" SHARED "")
-    add_dependencies (szip-shared SZIP)
-    set (SZIP_SHARED_LIBRARY "szip-shared")
+    add_library(${HDF_PACKAGE_NAMESPACE}szip-shared SHARED IMPORTED)
+    HDF_IMPORT_SET_LIB_OPTIONS (${HDF_PACKAGE_NAMESPACE}szip-shared "szip" SHARED "")
+    add_dependencies (${HDF_PACKAGE_NAMESPACE}szip-shared SZIP)
+    set (SZIP_SHARED_LIBRARY "${HDF_PACKAGE_NAMESPACE}szip-shared")
     set (SZIP_LIBRARIES ${SZIP_LIBRARIES} ${SZIP_SHARED_LIBRARY})
   endif ()
 
@@ -196,32 +163,14 @@ macro (PACKAGE_SZIP_LIBRARY compress_type)
       COMMENT "Copying ${SZIP_INCLUDE_DIR_GEN}/SZconfig.h to ${CMAKE_RUNTIME_OUTPUT_DIRECTORY}/"
   )
   set (EXTERNAL_HEADER_LIST ${EXTERNAL_HEADER_LIST} ${CMAKE_RUNTIME_OUTPUT_DIRECTORY}/SZconfig.h)
-  if (${compress_type} MATCHES "GIT" OR ${compress_type} MATCHES "SVN" OR ${compress_type} MATCHES "TGZ")
+  if (${compress_type} MATCHES "GIT" OR ${compress_type} MATCHES "TGZ")
     add_dependencies (SZIP-GenHeader-Copy SZIP)
   endif ()
 endmacro ()
 
 #-------------------------------------------------------------------------------
 macro (EXTERNAL_ZLIB_LIBRARY compress_type)
-  if (${compress_type} MATCHES "SVN")
-    EXTERNALPROJECT_ADD (ZLIB
-        SVN_REPOSITORY ${ZLIB_URL}
-        # [SVN_REVISION rev]
-        INSTALL_COMMAND ""
-        CMAKE_ARGS
-            -DBUILD_SHARED_LIBS:BOOL=${BUILD_SHARED_LIBS}
-            -DZLIB_PACKAGE_EXT:STRING=${HDF_PACKAGE_EXT}
-            -DZLIB_EXTERNALLY_CONFIGURED:BOOL=OFF
-            -DCMAKE_BUILD_TYPE:STRING=${CMAKE_BUILD_TYPE}
-            -DCMAKE_INSTALL_PREFIX:PATH=${CMAKE_INSTALL_PREFIX}
-            -DCMAKE_RUNTIME_OUTPUT_DIRECTORY:PATH=${CMAKE_RUNTIME_OUTPUT_DIRECTORY}
-            -DCMAKE_LIBRARY_OUTPUT_DIRECTORY:PATH=${CMAKE_LIBRARY_OUTPUT_DIRECTORY}
-            -DCMAKE_ARCHIVE_OUTPUT_DIRECTORY:PATH=${CMAKE_ARCHIVE_OUTPUT_DIRECTORY}
-            -DCMAKE_PDB_OUTPUT_DIRECTORY:PATH=${CMAKE_PDB_OUTPUT_DIRECTORY}
-            -DCMAKE_ANSI_CFLAGS:STRING=${CMAKE_ANSI_CFLAGS}
-            -DCMAKE_TOOLCHAIN_FILE:STRING=${CMAKE_TOOLCHAIN_FILE}
-    )
-  elseif (${compress_type} MATCHES "GIT")
+  if (${compress_type} MATCHES "GIT")
     EXTERNALPROJECT_ADD (ZLIB
         GIT_REPOSITORY ${ZLIB_URL}
         GIT_TAG ${ZLIB_BRANCH}
@@ -238,6 +187,7 @@ macro (EXTERNAL_ZLIB_LIBRARY compress_type)
             -DCMAKE_PDB_OUTPUT_DIRECTORY:PATH=${CMAKE_PDB_OUTPUT_DIRECTORY}
             -DCMAKE_ANSI_CFLAGS:STRING=${CMAKE_ANSI_CFLAGS}
             -DCMAKE_TOOLCHAIN_FILE:STRING=${CMAKE_TOOLCHAIN_FILE}
+            -DPACKAGE_NAMESPACE=${HDF_PACKAGE_NAMESPACE}
     )
   elseif (${compress_type} MATCHES "TGZ")
     EXTERNALPROJECT_ADD (ZLIB
@@ -256,6 +206,7 @@ macro (EXTERNAL_ZLIB_LIBRARY compress_type)
             -DCMAKE_PDB_OUTPUT_DIRECTORY:PATH=${CMAKE_PDB_OUTPUT_DIRECTORY}
             -DCMAKE_ANSI_CFLAGS:STRING=${CMAKE_ANSI_CFLAGS}
             -DCMAKE_TOOLCHAIN_FILE:STRING=${CMAKE_TOOLCHAIN_FILE}
+            -DPACKAGE_NAMESPACE=${HDF_PACKAGE_NAMESPACE}
     )
   endif ()
   externalproject_get_property (ZLIB BINARY_DIR SOURCE_DIR)
@@ -267,17 +218,18 @@ macro (EXTERNAL_ZLIB_LIBRARY compress_type)
   endif ()
 ##include (${BINARY_DIR}/${ZLIB_PACKAGE_NAME}${HDF_PACKAGE_EXT}-targets.cmake)
 # Create imported target zlib-static
-  add_library(zlib-static STATIC IMPORTED)
-  HDF_IMPORT_SET_LIB_OPTIONS (zlib-static ${ZLIB_LIB_NAME} STATIC "")
-  add_dependencies (zlib-static ZLIB)
-  set (ZLIB_STATIC_LIBRARY "zlib-static")
+  add_library(${HDF_PACKAGE_NAMESPACE}zlib-static STATIC IMPORTED)
+#  add_library(${HDF_PACKAGE_NAMESPACE}zlib-static ALIAS zlib-static)
+  HDF_IMPORT_SET_LIB_OPTIONS (${HDF_PACKAGE_NAMESPACE}zlib-static ${ZLIB_LIB_NAME} STATIC "")
+  add_dependencies (${HDF_PACKAGE_NAMESPACE}zlib-static ZLIB)
+  set (ZLIB_STATIC_LIBRARY "${HDF_PACKAGE_NAMESPACE}zlib-static")
   set (ZLIB_LIBRARIES ${ZLIB_STATIC_LIBRARY})
   if (BUILD_SHARED_LIBS)
     # Create imported target zlib-shared
-    add_library(zlib-shared SHARED IMPORTED)
-    HDF_IMPORT_SET_LIB_OPTIONS (zlib-shared ${ZLIB_LIB_NAME} SHARED "")
-    add_dependencies (zlib-shared ZLIB)
-    set (ZLIB_SHARED_LIBRARY "zlib-shared")
+    add_library(${HDF_PACKAGE_NAMESPACE}zlib-shared SHARED IMPORTED)
+    HDF_IMPORT_SET_LIB_OPTIONS (${HDF_PACKAGE_NAMESPACE}zlib-shared ${ZLIB_LIB_NAME} SHARED "")
+    add_dependencies (${HDF_PACKAGE_NAMESPACE}zlib-shared ZLIB)
+    set (ZLIB_SHARED_LIBRARY "${HDF_PACKAGE_NAMESPACE}zlib-shared")
     set (ZLIB_LIBRARIES ${ZLIB_LIBRARIES} ${ZLIB_SHARED_LIBRARY})
   endif ()
 
@@ -294,7 +246,7 @@ macro (PACKAGE_ZLIB_LIBRARY compress_type)
       COMMENT "Copying ${ZLIB_INCLUDE_DIR_GEN}/zconf.h to ${CMAKE_RUNTIME_OUTPUT_DIRECTORY}/"
   )
   set (EXTERNAL_HEADER_LIST ${EXTERNAL_HEADER_LIST} ${CMAKE_RUNTIME_OUTPUT_DIRECTORY}/zconf.h)
-  if (${compress_type} MATCHES "GIT" OR ${compress_type} MATCHES "SVN" OR ${compress_type} MATCHES "TGZ")
+  if (${compress_type} MATCHES "GIT" OR ${compress_type} MATCHES "TGZ")
     add_dependencies (ZLIB-GenHeader-Copy ZLIB)
   endif ()
 endmacro ()
diff --git a/m4/ax_check_class.m4 b/m4/ax_check_class.m4
index 098aa77..e673c2d 100644
--- a/m4/ax_check_class.m4
+++ b/m4/ax_check_class.m4
@@ -1,5 +1,5 @@
 # ===========================================================================
-#      http://www.gnu.org/software/autoconf-archive/ax_check_class.html
+#      https://www.gnu.org/software/autoconf-archive/ax_check_class.html
 # ===========================================================================
 #
 # SYNOPSIS
@@ -36,7 +36,7 @@
 #   Public License for more details.
 #
 #   You should have received a copy of the GNU General Public License along
-#   with this program. If not, see <http://www.gnu.org/licenses/>.
+#   with this program. If not, see <https://www.gnu.org/licenses/>.
 #
 #   As a special exception, the respective Autoconf Macro's copyright owner
 #   gives unlimited permission to copy, distribute and modify the configure
@@ -51,83 +51,18 @@
 #   modified version of the Autoconf Macro, you may extend this special
 #   exception to the GPL to apply to your modified version as well.
 
-#serial 7
+#serial 12
 
 AU_ALIAS([AC_CHECK_CLASS], [AX_CHECK_CLASS])
 AC_DEFUN([AX_CHECK_CLASS],[
 AC_REQUIRE([AX_PROG_JAVA])
 ac_var_name=`echo $1 | sed 's/\./_/g'`
-dnl Normaly I'd use a AC_CACHE_CHECK here but since the variable name is
+dnl Normally I'd use a AC_CACHE_CHECK here but since the variable name is
 dnl dynamic I need an extra level of extraction
 AC_MSG_CHECKING([for $1 class])
 AC_CACHE_VAL(ax_cv_class_$ac_var_name, [
-if test x$ac_cv_prog_uudecode_base64 = xyes; then
-dnl /**
-dnl  * Test.java: used to test dynamicaly if a class exists.
-dnl  */
-dnl public class Test
-dnl {
-dnl
-dnl public static void
-dnl main( String[] argv )
-dnl {
-dnl     Class lib;
-dnl     if (argv.length < 1)
-dnl      {
-dnl             System.err.println ("Missing argument");
-dnl             System.exit (77);
-dnl      }
-dnl     try
-dnl      {
-dnl             lib = Class.forName (argv[0]);
-dnl      }
-dnl     catch (ClassNotFoundException e)
-dnl      {
-dnl             System.exit (1);
-dnl      }
-dnl     lib = null;
-dnl     System.exit (0);
-dnl }
-dnl
-dnl }
-cat << \EOF > Test.uue
-begin-base64 644 Test.class
-yv66vgADAC0AKQcAAgEABFRlc3QHAAQBABBqYXZhL2xhbmcvT2JqZWN0AQAE
-bWFpbgEAFihbTGphdmEvbGFuZy9TdHJpbmc7KVYBAARDb2RlAQAPTGluZU51
-bWJlclRhYmxlDAAKAAsBAANlcnIBABVMamF2YS9pby9QcmludFN0cmVhbTsJ
-AA0ACQcADgEAEGphdmEvbGFuZy9TeXN0ZW0IABABABBNaXNzaW5nIGFyZ3Vt
-ZW50DAASABMBAAdwcmludGxuAQAVKExqYXZhL2xhbmcvU3RyaW5nOylWCgAV
-ABEHABYBABNqYXZhL2lvL1ByaW50U3RyZWFtDAAYABkBAARleGl0AQAEKEkp
-VgoADQAXDAAcAB0BAAdmb3JOYW1lAQAlKExqYXZhL2xhbmcvU3RyaW5nOylM
-amF2YS9sYW5nL0NsYXNzOwoAHwAbBwAgAQAPamF2YS9sYW5nL0NsYXNzBwAi
-AQAgamF2YS9sYW5nL0NsYXNzTm90Rm91bmRFeGNlcHRpb24BAAY8aW5pdD4B
-AAMoKVYMACMAJAoAAwAlAQAKU291cmNlRmlsZQEACVRlc3QuamF2YQAhAAEA
-AwAAAAAAAgAJAAUABgABAAcAAABtAAMAAwAAACkqvgSiABCyAAwSD7YAFBBN
-uAAaKgMyuAAeTKcACE0EuAAaAUwDuAAasQABABMAGgAdACEAAQAIAAAAKgAK
-AAAACgAAAAsABgANAA4ADgATABAAEwASAB4AFgAiABgAJAAZACgAGgABACMA
-JAABAAcAAAAhAAEAAQAAAAUqtwAmsQAAAAEACAAAAAoAAgAAAAQABAAEAAEA
-JwAAAAIAKA==
-====
-EOF
-                if $UUDECODE Test.uue; then
-                        :
-                else
-                        echo "configure: __oline__: uudecode had trouble decoding base 64 file 'Test.uue'" >&AS_MESSAGE_LOG_FD
-                        echo "configure: failed file was:" >&AS_MESSAGE_LOG_FD
-                        cat Test.uue >&AS_MESSAGE_LOG_FD
-                        ac_cv_prog_uudecode_base64=no
-                fi
-        rm -f Test.uue
-        if AC_TRY_COMMAND($JAVA $JAVAFLAGS Test $1) >/dev/null 2>&1; then
-                eval "ac_cv_class_$ac_var_name=yes"
-        else
-                eval "ac_cv_class_$ac_var_name=no"
-        fi
-        rm -f Test.class
-else
         AX_TRY_COMPILE_JAVA([$1], , [eval "ac_cv_class_$ac_var_name=yes"],
                 [eval "ac_cv_class_$ac_var_name=no"])
-fi
 eval "ac_var_val=$`eval echo ac_cv_class_$ac_var_name`"
 eval "HAVE_$ac_var_name=$`echo ac_cv_class_$ac_var_val`"
 HAVE_LAST_CLASS=$ac_var_val
@@ -137,7 +72,7 @@ else
         ifelse([$3], , :, [$3])
 fi
 ])
-dnl for some reason the above statment didn't fall though here?
+dnl for some reason the above statement didn't fall though here?
 dnl do scripts have variable scoping?
 eval "ac_var_val=$`eval echo ac_cv_class_$ac_var_name`"
 AC_MSG_RESULT($ac_var_val)
diff --git a/m4/ax_check_classpath.m4 b/m4/ax_check_classpath.m4
index 3c9081a..e08a253 100644
--- a/m4/ax_check_classpath.m4
+++ b/m4/ax_check_classpath.m4
@@ -1,5 +1,5 @@
 # ===========================================================================
-#    http://www.gnu.org/software/autoconf-archive/ax_check_classpath.html
+#    https://www.gnu.org/software/autoconf-archive/ax_check_classpath.html
 # ===========================================================================
 #
 # SYNOPSIS
@@ -33,7 +33,7 @@
 #   Public License for more details.
 #
 #   You should have received a copy of the GNU General Public License along
-#   with this program. If not, see <http://www.gnu.org/licenses/>.
+#   with this program. If not, see <https://www.gnu.org/licenses/>.
 #
 #   As a special exception, the respective Autoconf Macro's copyright owner
 #   gives unlimited permission to copy, distribute and modify the configure
@@ -48,7 +48,7 @@
 #   modified version of the Autoconf Macro, you may extend this special
 #   exception to the GPL to apply to your modified version as well.
 
-#serial 5
+#serial 6
 
 AU_ALIAS([AC_CHECK_CLASSPATH], [AX_CHECK_CLASSPATH])
 AC_DEFUN([AX_CHECK_CLASSPATH],[
diff --git a/m4/ax_check_java_home.m4 b/m4/ax_check_java_home.m4
index cfe8f58..1d60387 100644
--- a/m4/ax_check_java_home.m4
+++ b/m4/ax_check_java_home.m4
@@ -1,5 +1,5 @@
 # ===========================================================================
-#    http://www.gnu.org/software/autoconf-archive/ax_check_java_home.html
+#    https://www.gnu.org/software/autoconf-archive/ax_check_java_home.html
 # ===========================================================================
 #
 # SYNOPSIS
@@ -28,7 +28,7 @@
 #   Public License for more details.
 #
 #   You should have received a copy of the GNU General Public License along
-#   with this program. If not, see <http://www.gnu.org/licenses/>.
+#   with this program. If not, see <https://www.gnu.org/licenses/>.
 #
 #   As a special exception, the respective Autoconf Macro's copyright owner
 #   gives unlimited permission to copy, distribute and modify the configure
@@ -43,7 +43,7 @@
 #   modified version of the Autoconf Macro, you may extend this special
 #   exception to the GPL to apply to your modified version as well.
 
-#serial 6
+#serial 7
 
 AU_ALIAS([AC_CHECK_JAVA_HOME], [AX_CHECK_JAVA_HOME])
 
diff --git a/m4/ax_check_junit.m4 b/m4/ax_check_junit.m4
index 39b52d1..44dd70d 100644
--- a/m4/ax_check_junit.m4
+++ b/m4/ax_check_junit.m4
@@ -1,5 +1,5 @@
 # ===========================================================================
-#      http://www.gnu.org/software/autoconf-archive/ax_check_junit.html
+#      https://www.gnu.org/software/autoconf-archive/ax_check_junit.html
 # ===========================================================================
 #
 # SYNOPSIS
@@ -45,7 +45,7 @@
 #   and this notice are preserved. This file is offered as-is, without any
 #   warranty.
 
-#serial 5
+#serial 6
 
 AU_ALIAS([AC_CHECK_JUNIT], [AX_CHECK_JUNIT])
 AC_DEFUN([AX_CHECK_JUNIT],[
diff --git a/m4/ax_check_rqrd_class.m4 b/m4/ax_check_rqrd_class.m4
index 8f14241..baa041a 100644
--- a/m4/ax_check_rqrd_class.m4
+++ b/m4/ax_check_rqrd_class.m4
@@ -1,5 +1,5 @@
 # ===========================================================================
-#    http://www.gnu.org/software/autoconf-archive/ax_check_rqrd_class.html
+#   https://www.gnu.org/software/autoconf-archive/ax_check_rqrd_class.html
 # ===========================================================================
 #
 # SYNOPSIS
@@ -35,7 +35,7 @@
 #   Public License for more details.
 #
 #   You should have received a copy of the GNU General Public License along
-#   with this program. If not, see <http://www.gnu.org/licenses/>.
+#   with this program. If not, see <https://www.gnu.org/licenses/>.
 #
 #   As a special exception, the respective Autoconf Macro's copyright owner
 #   gives unlimited permission to copy, distribute and modify the configure
@@ -50,7 +50,7 @@
 #   modified version of the Autoconf Macro, you may extend this special
 #   exception to the GPL to apply to your modified version as well.
 
-#serial 5
+#serial 6
 
 AU_ALIAS([AC_CHECK_RQRD_CLASS], [AX_CHECK_RQRD_CLASS])
 AC_DEFUN([AX_CHECK_RQRD_CLASS],[
diff --git a/m4/ax_java_check_class.m4 b/m4/ax_java_check_class.m4
index 917638a..c9d60f7 100644
--- a/m4/ax_java_check_class.m4
+++ b/m4/ax_java_check_class.m4
@@ -1,5 +1,5 @@
 # ===========================================================================
-#    http://www.gnu.org/software/autoconf-archive/ax_java_check_class.html
+#   https://www.gnu.org/software/autoconf-archive/ax_java_check_class.html
 # ===========================================================================
 #
 # SYNOPSIS
@@ -15,7 +15,7 @@
 #
 #   The macro tries to compile a minimal program importing <class>. Some
 #   newer compilers moan about the failure to use this but fail or produce a
-#   class file anyway. All moaing is sunk to /dev/null since I only wanted
+#   class file anyway. All moaning is sunk to /dev/null since I only wanted
 #   to know if the class could be imported. This is a recommended followup
 #   to AX_CHECK_JAVA_PLUGIN with classpath appropriately adjusted.
 #
@@ -34,7 +34,7 @@
 #   Public License for more details.
 #
 #   You should have received a copy of the GNU General Public License along
-#   with this program. If not, see <http://www.gnu.org/licenses/>.
+#   with this program. If not, see <https://www.gnu.org/licenses/>.
 #
 #   As a special exception, the respective Autoconf Macro's copyright owner
 #   gives unlimited permission to copy, distribute and modify the configure
@@ -49,7 +49,7 @@
 #   modified version of the Autoconf Macro, you may extend this special
 #   exception to the GPL to apply to your modified version as well.
 
-#serial 9
+#serial 12
 
 AU_ALIAS([DPS_JAVA_CHECK_CLASS], [AX_JAVA_CHECK_CLASS])
 AC_DEFUN([AX_JAVA_CHECK_CLASS],[
diff --git a/m4/ax_java_options.m4 b/m4/ax_java_options.m4
index 36c10d9..722d788 100644
--- a/m4/ax_java_options.m4
+++ b/m4/ax_java_options.m4
@@ -1,5 +1,5 @@
 # ===========================================================================
-#      http://www.gnu.org/software/autoconf-archive/ax_java_options.html
+#     https://www.gnu.org/software/autoconf-archive/ax_java_options.html
 # ===========================================================================
 #
 # SYNOPSIS
@@ -27,7 +27,7 @@
 #   and this notice are preserved. This file is offered as-is, without any
 #   warranty.
 
-#serial 6
+#serial 7
 
 AU_ALIAS([AC_JAVA_OPTIONS], [AX_JAVA_OPTIONS])
 AC_DEFUN([AX_JAVA_OPTIONS],[
diff --git a/m4/ax_jni_include_dir.m4 b/m4/ax_jni_include_dir.m4
index becb33a..ae7a5f0 100644
--- a/m4/ax_jni_include_dir.m4
+++ b/m4/ax_jni_include_dir.m4
@@ -1,5 +1,5 @@
 # ===========================================================================
-#    http://www.gnu.org/software/autoconf-archive/ax_jni_include_dir.html
+#    https://www.gnu.org/software/autoconf-archive/ax_jni_include_dir.html
 # ===========================================================================
 #
 # SYNOPSIS
@@ -32,6 +32,10 @@
 #
 #   - at the configure level, setenv JAVAC
 #
+#   This macro depends on AC_CANONICAL_HOST which requires that config.guess
+#   and config.sub be distributed along with the source code.  See autoconf
+#   manual for details.
+#
 #   Note: This macro can work with the autoconf M4 macros for Java programs.
 #   This particular macro is not part of the original set of macros.
 #
@@ -44,11 +48,13 @@
 #   and this notice are preserved. This file is offered as-is, without any
 #   warranty.
 
-#serial 11
+#serial 15
 
 AU_ALIAS([AC_JNI_INCLUDE_DIR], [AX_JNI_INCLUDE_DIR])
 AC_DEFUN([AX_JNI_INCLUDE_DIR],[
 
+AC_REQUIRE([AC_CANONICAL_HOST])
+
 JNI_INCLUDE_DIRS=""
 
 if test "x$JAVA_HOME" != x; then
@@ -66,14 +72,17 @@ else
 fi
 
 case "$host_os" in
-        darwin*)        # Apple JDK is at /System location and has headers symlinked elsewhere
-                        case "$_JTOPDIR" in
-                        /System/Library/Frameworks/JavaVM.framework/*)
-				_JTOPDIR=`echo "$_JTOPDIR" | sed -e 's:/[[^/]]*$::'`
-				_JINC="$_JTOPDIR/Headers";;
-			*)      _JINC="$_JTOPDIR/include";;
-                        esac;;
-        *)              _JINC="$_JTOPDIR/include";;
+        darwin*)        # Apple Java headers are inside the Xcode bundle.
+            macos_version=$(sw_vers -productVersion | sed -n -e 's/^@<:@0-9@:>@*.\(@<:@0-9@:>@*\).@<:@0-9@:>@*/\1/p')
+            if @<:@ "$macos_version" -gt "7" @:>@; then
+                _JTOPDIR="$(xcrun --show-sdk-path)/System/Library/Frameworks/JavaVM.framework"
+                _JINC="$_JTOPDIR/Headers"
+            else
+                _JTOPDIR="/System/Library/Frameworks/JavaVM.framework"
+                _JINC="$_JTOPDIR/Headers"
+            fi
+            ;;
+        *) _JINC="$_JTOPDIR/include";;
 esac
 _AS_ECHO_LOG([_JTOPDIR=$_JTOPDIR])
 _AS_ECHO_LOG([_JINC=$_JINC])
@@ -81,13 +90,21 @@ _AS_ECHO_LOG([_JINC=$_JINC])
 # On Mac OS X 10.6.4, jni.h is a symlink:
 # /System/Library/Frameworks/JavaVM.framework/Versions/Current/Headers/jni.h
 # -> ../../CurrentJDK/Headers/jni.h.
-AC_CHECK_FILE([$_JINC/jni.h],
-	[JNI_INCLUDE_DIRS="$JNI_INCLUDE_DIRS $_JINC"],
-	[_JTOPDIR=`echo "$_JTOPDIR" | sed -e 's:/[[^/]]*$::'`
-	 AC_CHECK_FILE([$_JTOPDIR/include/jni.h],
-		[JNI_INCLUDE_DIRS="$JNI_INCLUDE_DIRS $_JTOPDIR/include"],
-                AC_MSG_ERROR([cannot find JDK header files]))
-	])
+AC_CACHE_CHECK(jni headers, ac_cv_jni_header_path,
+[
+  if test -f "$_JINC/jni.h"; then
+    ac_cv_jni_header_path="$_JINC"
+    JNI_INCLUDE_DIRS="$JNI_INCLUDE_DIRS $ac_cv_jni_header_path"
+  else
+    _JTOPDIR=`echo "$_JTOPDIR" | sed -e 's:/[[^/]]*$::'`
+    if test -f "$_JTOPDIR/include/jni.h"; then
+      ac_cv_jni_header_path="$_JTOPDIR/include"
+      JNI_INCLUDE_DIRS="$JNI_INCLUDE_DIRS $ac_cv_jni_header_path"
+    else
+      ac_cv_jni_header_path=none
+    fi
+  fi
+])
 
 # get the likely subdirectories for system specific java includes
 case "$host_os" in
@@ -102,13 +119,15 @@ cygwin*)	_JNI_INC_SUBDIRS="win32";;
 *)              _JNI_INC_SUBDIRS="genunix";;
 esac
 
-# add any subdirectories that are present
-for JINCSUBDIR in $_JNI_INC_SUBDIRS
-do
+if test "x$ac_cv_jni_header_path" != "xnone"; then
+  # add any subdirectories that are present
+  for JINCSUBDIR in $_JNI_INC_SUBDIRS
+  do
     if test -d "$_JTOPDIR/include/$JINCSUBDIR"; then
          JNI_INCLUDE_DIRS="$JNI_INCLUDE_DIRS $_JTOPDIR/include/$JINCSUBDIR"
     fi
-done
+  done
+fi
 ])
 
 # _ACJNI_FOLLOW_SYMLINKS <path>
diff --git a/m4/ax_prog_jar.m4 b/m4/ax_prog_jar.m4
index 3c60fca..d474912 100644
--- a/m4/ax_prog_jar.m4
+++ b/m4/ax_prog_jar.m4
@@ -1,5 +1,5 @@
 # ===========================================================================
-#        http://www.gnu.org/software/autoconf-archive/ax_prog_jar.html
+#       https://www.gnu.org/software/autoconf-archive/ax_prog_jar.html
 # ===========================================================================
 #
 # SYNOPSIS
@@ -37,7 +37,7 @@
 #   and this notice are preserved. This file is offered as-is, without any
 #   warranty.
 
-#serial 7
+#serial 8
 
 AU_ALIAS([AC_PROG_JAR], [AX_PROG_JAR])
 AC_DEFUN([AX_PROG_JAR],[
diff --git a/m4/ax_prog_java.m4 b/m4/ax_prog_java.m4
index 03961db..c2e6964 100644
--- a/m4/ax_prog_java.m4
+++ b/m4/ax_prog_java.m4
@@ -1,5 +1,5 @@
 # ===========================================================================
-#       http://www.gnu.org/software/autoconf-archive/ax_prog_java.html
+#       https://www.gnu.org/software/autoconf-archive/ax_prog_java.html
 # ===========================================================================
 #
 # SYNOPSIS
@@ -85,7 +85,7 @@
 #   Public License for more details.
 #
 #   You should have received a copy of the GNU General Public License along
-#   with this program. If not, see <http://www.gnu.org/licenses/>.
+#   with this program. If not, see <https://www.gnu.org/licenses/>.
 #
 #   As a special exception, the respective Autoconf Macro's copyright owner
 #   gives unlimited permission to copy, distribute and modify the configure
@@ -100,7 +100,7 @@
 #   modified version of the Autoconf Macro, you may extend this special
 #   exception to the GPL to apply to your modified version as well.
 
-#serial 9
+#serial 10
 
 AU_ALIAS([AC_PROG_JAVA], [AX_PROG_JAVA])
 AC_DEFUN([AX_PROG_JAVA],[
diff --git a/m4/ax_prog_java_cc.m4 b/m4/ax_prog_java_cc.m4
index 3df064f..ce9612d 100644
--- a/m4/ax_prog_java_cc.m4
+++ b/m4/ax_prog_java_cc.m4
@@ -1,5 +1,5 @@
 # ===========================================================================
-#      http://www.gnu.org/software/autoconf-archive/ax_prog_java_cc.html
+#     https://www.gnu.org/software/autoconf-archive/ax_prog_java_cc.html
 # ===========================================================================
 #
 # SYNOPSIS
@@ -56,7 +56,7 @@
 #   Public License for more details.
 #
 #   You should have received a copy of the GNU General Public License along
-#   with this program. If not, see <http://www.gnu.org/licenses/>.
+#   with this program. If not, see <https://www.gnu.org/licenses/>.
 #
 #   As a special exception, the respective Autoconf Macro's copyright owner
 #   gives unlimited permission to copy, distribute and modify the configure
@@ -71,7 +71,7 @@
 #   modified version of the Autoconf Macro, you may extend this special
 #   exception to the GPL to apply to your modified version as well.
 
-#serial 4
+#serial 5
 
 # AX_PROG_JAVA_CC([COMPILER ...])
 # --------------------------
diff --git a/m4/ax_prog_java_works.m4 b/m4/ax_prog_java_works.m4
index 54e132a..bc70526 100644
--- a/m4/ax_prog_java_works.m4
+++ b/m4/ax_prog_java_works.m4
@@ -1,5 +1,5 @@
 # ===========================================================================
-#    http://www.gnu.org/software/autoconf-archive/ax_prog_java_works.html
+#    https://www.gnu.org/software/autoconf-archive/ax_prog_java_works.html
 # ===========================================================================
 #
 # SYNOPSIS
@@ -32,7 +32,7 @@
 #   Public License for more details.
 #
 #   You should have received a copy of the GNU General Public License along
-#   with this program. If not, see <http://www.gnu.org/licenses/>.
+#   with this program. If not, see <https://www.gnu.org/licenses/>.
 #
 #   As a special exception, the respective Autoconf Macro's copyright owner
 #   gives unlimited permission to copy, distribute and modify the configure
@@ -47,57 +47,16 @@
 #   modified version of the Autoconf Macro, you may extend this special
 #   exception to the GPL to apply to your modified version as well.
 
-#serial 9
+#serial 11
 
 AU_ALIAS([AC_PROG_JAVA_WORKS], [AX_PROG_JAVA_WORKS])
 AC_DEFUN([AX_PROG_JAVA_WORKS], [
-AC_PATH_PROG(UUDECODE, uudecode, [no])
-if test x$UUDECODE != xno; then
-AC_CACHE_CHECK([if uudecode can decode base 64 file], ac_cv_prog_uudecode_base64, [
-dnl /**
-dnl  * Test.java: used to test if java compiler works.
-dnl  */
-dnl public class Test
-dnl {
-dnl
-dnl public static void
-dnl main( String[] argv )
-dnl {
-dnl     System.exit (0);
-dnl }
-dnl
-dnl }
-cat << \EOF > Test.uue
-begin-base64 644 Test.class
-yv66vgADAC0AFQcAAgEABFRlc3QHAAQBABBqYXZhL2xhbmcvT2JqZWN0AQAE
-bWFpbgEAFihbTGphdmEvbGFuZy9TdHJpbmc7KVYBAARDb2RlAQAPTGluZU51
-bWJlclRhYmxlDAAKAAsBAARleGl0AQAEKEkpVgoADQAJBwAOAQAQamF2YS9s
-YW5nL1N5c3RlbQEABjxpbml0PgEAAygpVgwADwAQCgADABEBAApTb3VyY2VG
-aWxlAQAJVGVzdC5qYXZhACEAAQADAAAAAAACAAkABQAGAAEABwAAACEAAQAB
-AAAABQO4AAyxAAAAAQAIAAAACgACAAAACgAEAAsAAQAPABAAAQAHAAAAIQAB
-AAEAAAAFKrcAErEAAAABAAgAAAAKAAIAAAAEAAQABAABABMAAAACABQ=
-====
-EOF
-if $UUDECODE Test.uue; then
-        ac_cv_prog_uudecode_base64=yes
-else
-        echo "configure: __oline__: uudecode had trouble decoding base 64 file 'Test.uue'" >&AS_MESSAGE_LOG_FD
-        echo "configure: failed file was:" >&AS_MESSAGE_LOG_FD
-        cat Test.uue >&AS_MESSAGE_LOG_FD
-        ac_cv_prog_uudecode_base64=no
-fi
-rm -f Test.uue])
-fi
-if test x$ac_cv_prog_uudecode_base64 != xyes; then
-        rm -f Test.class
-        AC_MSG_WARN([I have to compile Test.class from scratch])
         if test x$ac_cv_prog_javac_works = xno; then
                 AC_MSG_ERROR([Cannot compile java source. $JAVAC does not work properly])
         fi
         if test x$ac_cv_prog_javac_works = x; then
                 AX_PROG_JAVAC
         fi
-fi
 AC_CACHE_CHECK(if $JAVA works, ac_cv_prog_java_works, [
 JAVA_TEST=Test.java
 CLASS_TEST=Test.class
@@ -111,7 +70,6 @@ public static void main (String args[]) {
 } }
 EOF
 changequote([, ])dnl
-if test x$ac_cv_prog_uudecode_base64 != xyes; then
         if AC_TRY_COMMAND($JAVAC $JAVACFLAGS $JAVA_TEST) && test -s $CLASS_TEST; then
                 :
         else
@@ -119,7 +77,6 @@ if test x$ac_cv_prog_uudecode_base64 != xyes; then
           cat $JAVA_TEST >&AS_MESSAGE_LOG_FD
           AC_MSG_ERROR(The Java compiler $JAVAC failed (see config.log, check the CLASSPATH?))
         fi
-fi
 if AC_TRY_COMMAND($JAVA -classpath . $JAVAFLAGS $TEST) >/dev/null 2>&1; then
   ac_cv_prog_java_works=yes
 else
@@ -127,7 +84,7 @@ else
   cat $JAVA_TEST >&AS_MESSAGE_LOG_FD
   AC_MSG_ERROR(The Java VM $JAVA failed (see config.log, check the CLASSPATH?))
 fi
-rm -fr $JAVA_TEST $CLASS_TEST Test.uue
+rm -f $JAVA_TEST $CLASS_TEST
 ])
 AC_PROVIDE([$0])dnl
 ]
diff --git a/m4/ax_prog_javac.m4 b/m4/ax_prog_javac.m4
index d061243..8abb733 100644
--- a/m4/ax_prog_javac.m4
+++ b/m4/ax_prog_javac.m4
@@ -1,5 +1,5 @@
 # ===========================================================================
-#       http://www.gnu.org/software/autoconf-archive/ax_prog_javac.html
+#      https://www.gnu.org/software/autoconf-archive/ax_prog_javac.html
 # ===========================================================================
 #
 # SYNOPSIS
@@ -49,7 +49,7 @@
 #   Public License for more details.
 #
 #   You should have received a copy of the GNU General Public License along
-#   with this program. If not, see <http://www.gnu.org/licenses/>.
+#   with this program. If not, see <https://www.gnu.org/licenses/>.
 #
 #   As a special exception, the respective Autoconf Macro's copyright owner
 #   gives unlimited permission to copy, distribute and modify the configure
@@ -64,7 +64,7 @@
 #   modified version of the Autoconf Macro, you may extend this special
 #   exception to the GPL to apply to your modified version as well.
 
-#serial 7
+#serial 8
 
 AU_ALIAS([AC_PROG_JAVAC], [AX_PROG_JAVAC])
 AC_DEFUN([AX_PROG_JAVAC],[
diff --git a/m4/ax_prog_javac_works.m4 b/m4/ax_prog_javac_works.m4
index 7dfa1e3..9b48149 100644
--- a/m4/ax_prog_javac_works.m4
+++ b/m4/ax_prog_javac_works.m4
@@ -1,5 +1,5 @@
 # ===========================================================================
-#    http://www.gnu.org/software/autoconf-archive/ax_prog_javac_works.html
+#   https://www.gnu.org/software/autoconf-archive/ax_prog_javac_works.html
 # ===========================================================================
 #
 # SYNOPSIS
@@ -32,7 +32,7 @@
 #   Public License for more details.
 #
 #   You should have received a copy of the GNU General Public License along
-#   with this program. If not, see <http://www.gnu.org/licenses/>.
+#   with this program. If not, see <https://www.gnu.org/licenses/>.
 #
 #   As a special exception, the respective Autoconf Macro's copyright owner
 #   gives unlimited permission to copy, distribute and modify the configure
@@ -47,7 +47,7 @@
 #   modified version of the Autoconf Macro, you may extend this special
 #   exception to the GPL to apply to your modified version as well.
 
-#serial 6
+#serial 7
 
 AU_ALIAS([AC_PROG_JAVAC_WORKS], [AX_PROG_JAVAC_WORKS])
 AC_DEFUN([AX_PROG_JAVAC_WORKS],[
diff --git a/m4/ax_prog_javadoc.m4 b/m4/ax_prog_javadoc.m4
index bcb6045..b9fcea4 100644
--- a/m4/ax_prog_javadoc.m4
+++ b/m4/ax_prog_javadoc.m4
@@ -1,5 +1,5 @@
 # ===========================================================================
-#      http://www.gnu.org/software/autoconf-archive/ax_prog_javadoc.html
+#     https://www.gnu.org/software/autoconf-archive/ax_prog_javadoc.html
 # ===========================================================================
 #
 # SYNOPSIS
@@ -38,7 +38,7 @@
 #   and this notice are preserved. This file is offered as-is, without any
 #   warranty.
 
-#serial 8
+#serial 9
 
 AU_ALIAS([AC_PROG_JAVADOC], [AX_PROG_JAVADOC])
 AC_DEFUN([AX_PROG_JAVADOC],[
diff --git a/m4/ax_prog_javah.m4 b/m4/ax_prog_javah.m4
index cefc616..935ec89 100644
--- a/m4/ax_prog_javah.m4
+++ b/m4/ax_prog_javah.m4
@@ -1,5 +1,5 @@
 # ===========================================================================
-#       http://www.gnu.org/software/autoconf-archive/ax_prog_javah.html
+#      https://www.gnu.org/software/autoconf-archive/ax_prog_javah.html
 # ===========================================================================
 #
 # SYNOPSIS
@@ -21,7 +21,7 @@
 #   and this notice are preserved. This file is offered as-is, without any
 #   warranty.
 
-#serial 8
+#serial 11
 
 AU_ALIAS([AC_PROG_JAVAH], [AX_PROG_JAVAH])
 AC_DEFUN([AX_PROG_JAVAH],[
@@ -30,19 +30,19 @@ AC_REQUIRE([AC_PROG_CPP])dnl
 AC_PATH_PROG(JAVAH,javah)
 AS_IF([test -n "$ac_cv_path_JAVAH"],
       [
-        AC_TRY_CPP([#include <jni.h>],,[
+        AC_PREPROC_IFELSE([AC_LANG_SOURCE([[#include <jni.h>]])],[],[
         ac_save_CPPFLAGS="$CPPFLAGS"
-		_ACJAVAH_FOLLOW_SYMLINKS("$ac_cv_path_JAVAH")
+        _ACJAVAH_FOLLOW_SYMLINKS("$ac_cv_path_JAVAH")
         ax_prog_javah_bin_dir=`AS_DIRNAME([$_ACJAVAH_FOLLOWED])`
         ac_dir="`AS_DIRNAME([$ax_prog_javah_bin_dir])`/include"
         AS_CASE([$build_os],
-                [cygwin*],
+                [cygwin*|mingw*],
                 [ac_machdep=win32],
                 [ac_machdep=`AS_ECHO($build_os) | sed 's,[[-0-9]].*,,'`])
         CPPFLAGS="$ac_save_CPPFLAGS -I$ac_dir -I$ac_dir/$ac_machdep"
-        AC_TRY_CPP([#include <jni.h>],
-                   ac_save_CPPFLAGS="$CPPFLAGS",
-                   AC_MSG_WARN([unable to include <jni.h>]))
+        AC_PREPROC_IFELSE([AC_LANG_SOURCE([[#include <jni.h>]])],
+                          [ac_save_CPPFLAGS="$CPPFLAGS"],
+                          [AC_MSG_WARN([unable to include <jni.h>])])
         CPPFLAGS="$ac_save_CPPFLAGS"])
       ])
 ])
diff --git a/m4/ax_try_compile_java.m4 b/m4/ax_try_compile_java.m4
index a8ed6b2..245c36c 100644
--- a/m4/ax_try_compile_java.m4
+++ b/m4/ax_try_compile_java.m4
@@ -1,5 +1,5 @@
 # ===========================================================================
-#    http://www.gnu.org/software/autoconf-archive/ax_try_compile_java.html
+#   https://www.gnu.org/software/autoconf-archive/ax_try_compile_java.html
 # ===========================================================================
 #
 # SYNOPSIS
@@ -29,7 +29,7 @@
 #   and this notice are preserved. This file is offered as-is, without any
 #   warranty.
 
-#serial 8
+#serial 10
 
 AU_ALIAS([AC_TRY_COMPILE_JAVA], [AX_TRY_COMPILE_JAVA])
 AC_DEFUN([AX_TRY_COMPILE_JAVA],[
@@ -48,8 +48,8 @@ dnl Don't remove the temporary files here, so they can be examined.
 else
   echo "configure: failed program was:" >&AS_MESSAGE_LOG_FD
   cat Test.java >&AS_MESSAGE_LOG_FD
-ifelse([$4], , , [  rm -fr Test.java Test.class
+ifelse([$4], , , [  rm -f Test.java Test.class
   $4
 ])dnl
 fi
-rm -fr Test.java Test.class])
+rm -f Test.java Test.class])
diff --git a/m4/ax_try_run_java.m4 b/m4/ax_try_run_java.m4
index c680f03..2ebb86d 100644
--- a/m4/ax_try_run_java.m4
+++ b/m4/ax_try_run_java.m4
@@ -1,5 +1,5 @@
 # ===========================================================================
-#      http://www.gnu.org/software/autoconf-archive/ax_try_run_java.html
+#     https://www.gnu.org/software/autoconf-archive/ax_try_run_java.html
 # ===========================================================================
 #
 # SYNOPSIS
@@ -29,7 +29,7 @@
 #   and this notice are preserved. This file is offered as-is, without any
 #   warranty.
 
-#serial 2
+#serial 3
 
 AU_ALIAS([AC_TRY_RUN_JAVA], [AX_TRY_RUN_JAVA])
 AC_DEFUN([AX_TRY_RUN_JAVA],[
diff --git a/test/CMakeVFDTests.cmake b/test/CMakeVFDTests.cmake
index 791f75c..64ccacd 100644
--- a/test/CMakeVFDTests.cmake
+++ b/test/CMakeVFDTests.cmake
@@ -142,7 +142,7 @@ endif ()
                         ${vfdname}-shared/${vfdname}-${vfdtest}-shared.out
                         ${vfdname}-shared/${vfdname}-${vfdtest}-shared.out.err
             )
-            add_test (NAME VFD-${vfdname}-${test}-shared
+            add_test (NAME VFD-${vfdname}-${vfdtest}-shared
                 COMMAND "${CMAKE_COMMAND}"
                     -D "TEST_PROGRAM=$<TARGET_FILE:${vfdtest}-shared>"
                     -D "TEST_ARGS:STRING="
@@ -163,7 +163,7 @@ endif ()
               COMMAND ${CMAKE_COMMAND} -E echo "SKIP VFD-${vfdname}-${vfdtest}"
           )
           if (BUILD_SHARED_LIBS)
-            add_test (NAME VFD-${vfdname}-${test}-shared
+            add_test (NAME VFD-${vfdname}-${vfdtest}-shared
                 COMMAND ${CMAKE_COMMAND} -E echo "SKIP VFD-${vfdname}-${vfdtest}-shared"
             )
           endif ()
diff --git a/testpar/CMakeTests.cmake b/testpar/CMakeTests.cmake
index 214801b..4095bd9 100644
--- a/testpar/CMakeTests.cmake
+++ b/testpar/CMakeTests.cmake
@@ -89,7 +89,7 @@ endforeach ()
 
 # The t_pflush1 test is hard-coded to fail.
 set_tests_properties (MPI_TEST_t_pflush1 PROPERTIES WILL_FAIL "true")
-#set_property (TEST MPI_TEST_t_pflush1 PROPERTY PASS_REGULAR_EXPRESSION "PASSED")
+#set_property (MPI_TEST_t_pflush1 PROPERTY PASS_REGULAR_EXPRESSION "PASSED")
 set_tests_properties (MPI_TEST_t_pflush2 PROPERTIES DEPENDS MPI_TEST_t_pflush1)
 set_tests_properties (MPI_TEST_t_prestart PROPERTIES DEPENDS MPI_TEST_t_pshutdown)
 
diff --git a/tools/test/misc/CMakeTestsMkgrp.cmake b/tools/test/misc/CMakeTestsMkgrp.cmake
index db3b7e4..87d3a20 100644
--- a/tools/test/misc/CMakeTestsMkgrp.cmake
+++ b/tools/test/misc/CMakeTestsMkgrp.cmake
@@ -76,7 +76,7 @@
       if (last_test)
         set_tests_properties (H5MKGRP-${resultfile} PROPERTIES DEPENDS ${last_test})
       endif ()
-    else (HDF5_ENABLE_USING_MEMCHECKER)
+    else ()
       set_tests_properties (H5MKGRP-${resultfile} PROPERTIES DEPENDS H5MKGRP-${resultfile}-clear-objects)
       add_test (
           NAME H5MKGRP-${resultfile}-h5ls
author	Allen Byrne <byrn@hdfgroup.org>	2019-04-06 15:33:23 (GMT)
committer	Allen Byrne <byrn@hdfgroup.org>	2019-04-06 15:33:23 (GMT)
commit	1fb34f7e8cb960bdf8132cd4cf63b5c7cf11a969 (patch)
tree	24b60c102d5ad82392ba42f6cfb5b012dd39d971
parent	af7dc057890c8ddb9327e8bb7e93f78195152320 (diff)
parent	ca1165f3ab5121e433eb8ffa4de74e061c8b3cd1 (diff)
download	hdf5-1fb34f7e8cb960bdf8132cd4cf63b5c7cf11a969.zip hdf5-1fb34f7e8cb960bdf8132cd4cf63b5c7cf11a969.tar.gz hdf5-1fb34f7e8cb960bdf8132cd4cf63b5c7cf11a969.tar.bz2