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authorDana Robinson <derobins@hdfgroup.org>2018-03-30 15:50:49 (GMT)
committerDana Robinson <derobins@hdfgroup.org>2018-03-30 15:50:49 (GMT)
commit066b342af1ca455661034f72c141cef99f1bedb0 (patch)
tree91d139d70c5dd1a5846999d3d0478bc1464eb66a
parent73acad2919ad9bcb56e7d6e8b495fa6354b28c5e (diff)
parentb8f56d22dfd754715d10accc5997fe923bdb7593 (diff)
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Merge pull request #1013 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:vol_normalization to develop
* commit 'b8f56d22dfd754715d10accc5997fe923bdb7593': Created internal functions for a couple of H5F calls.
-rw-r--r--src/H5F.c262
-rw-r--r--src/H5Fint.c318
-rw-r--r--src/H5Fprivate.h2
3 files changed, 334 insertions, 248 deletions
diff --git a/src/H5F.c b/src/H5F.c
index 2cd65cb..ce5664a 100644
--- a/src/H5F.c
+++ b/src/H5F.c
@@ -1260,82 +1260,23 @@ done:
herr_t
H5Fget_metadata_read_retry_info(hid_t file_id, H5F_retry_info_t *info)
{
- H5F_t *file; /* File object for file ID */
- unsigned i, j; /* Local index variable */
- size_t tot_size; /* Size of each retries[i] */
- herr_t ret_value = SUCCEED; /* Return value */
+ H5F_t *file; /* File object for file ID */
+ herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_API(FAIL)
H5TRACE2("e", "i*x", file_id, info);
/* Check args */
- if(!info)
+ if (!info)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "no info struct")
/* Get the file pointer */
- if(NULL == (file = (H5F_t *)H5I_object_verify(file_id, H5I_FILE)))
+ if (NULL == (file = (H5F_t *)H5I_object_verify(file_id, H5I_FILE)))
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "not a file ID")
- /* Copy the # of bins for "retries" array */
- info->nbins = file->shared->retries_nbins;
-
- /* Initialize the array of "retries" */
- HDmemset(info->retries, 0, sizeof(info->retries));
-
- /* Return if there are no bins -- no retries */
- if(!info->nbins)
- HGOTO_DONE(SUCCEED);
-
- /* Calculate size for each retries[i] */
- tot_size = info->nbins * sizeof(uint32_t);
-
- /* Map and copy information to info's retries for metadata items with tracking for read retries */
- j = 0;
- for(i = 0; i < H5AC_NTYPES; i++) {
- switch(i) {
- case H5AC_OHDR_ID:
- case H5AC_OHDR_CHK_ID:
- case H5AC_BT2_HDR_ID:
- case H5AC_BT2_INT_ID:
- case H5AC_BT2_LEAF_ID:
- case H5AC_FHEAP_HDR_ID:
- case H5AC_FHEAP_DBLOCK_ID:
- case H5AC_FHEAP_IBLOCK_ID:
- case H5AC_FSPACE_HDR_ID:
- case H5AC_FSPACE_SINFO_ID:
- case H5AC_SOHM_TABLE_ID:
- case H5AC_SOHM_LIST_ID:
- case H5AC_EARRAY_HDR_ID:
- case H5AC_EARRAY_IBLOCK_ID:
- case H5AC_EARRAY_SBLOCK_ID:
- case H5AC_EARRAY_DBLOCK_ID:
- case H5AC_EARRAY_DBLK_PAGE_ID:
- case H5AC_FARRAY_HDR_ID:
- case H5AC_FARRAY_DBLOCK_ID:
- case H5AC_FARRAY_DBLK_PAGE_ID:
- case H5AC_SUPERBLOCK_ID:
- HDassert(j < H5F_NUM_METADATA_READ_RETRY_TYPES);
- if(file->shared->retries[i] != NULL) {
- /* Allocate memory for retries[i]
- *
- * This memory should be released by the user with
- * the H5free_memory() call.
- */
- if(NULL == (info->retries[j] = (uint32_t *)H5MM_malloc(tot_size)))
- HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL, "memory allocation failed")
-
- /* Copy the information */
- HDmemcpy(info->retries[j], file->shared->retries[i], tot_size);
- } /* end if */
-
- /* Increment location in info->retries[] array */
- j++;
- break;
-
- default:
- break;
- } /* end switch */
- } /* end for */
+ /* Get the retry info */
+ if (H5F_get_metadata_read_retry_info(file, info) < 0)
+ HGOTO_ERROR(H5E_FILE, H5E_CANTRELEASE, FAIL, "can't get metadata read retry info")
done:
FUNC_LEAVE_API(ret_value)
@@ -1446,196 +1387,21 @@ done:
herr_t
H5Fstart_swmr_write(hid_t file_id)
{
- hbool_t ci_load = FALSE; /* whether MDC ci load requested */
- hbool_t ci_write = FALSE; /* whether MDC CI write requested */
- H5F_t *file = NULL; /* File info */
- size_t grp_dset_count=0; /* # of open objects: groups & datasets */
- size_t nt_attr_count=0; /* # of opened named datatypes + opened attributes */
- hid_t *obj_ids=NULL; /* List of ids */
- H5G_loc_t *obj_glocs=NULL; /* Group location of the object */
- H5O_loc_t *obj_olocs=NULL; /* Object location */
- H5G_name_t *obj_paths=NULL; /* Group hierarchy path */
- size_t u; /* Local index variable */
- hbool_t setup = FALSE; /* Boolean flag to indicate whether SWMR setting is enabled */
- H5F_io_info2_t fio_info; /* I/O info for operation */
- herr_t ret_value = SUCCEED; /* Return value */
+ H5F_t *file = NULL; /* File info */
+ herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_API(FAIL)
H5TRACE1("e", "i", file_id);
/* check args */
- if(NULL == (file = (H5F_t *)H5I_object_verify(file_id, H5I_FILE)))
- HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a file")
-
- /* Should have write permission */
- if((H5F_INTENT(file) & H5F_ACC_RDWR) == 0)
- HGOTO_ERROR(H5E_FILE, H5E_BADVALUE, FAIL, "no write intent on file")
-
- if(file->shared->sblock->super_vers < HDF5_SUPERBLOCK_VERSION_3)
- HGOTO_ERROR(H5E_FILE, H5E_BADVALUE, FAIL, "file superblock version should be at least 3")
-
- HDassert((file->shared->low_bound == H5F_LIBVER_V110) && (file->shared->high_bound == H5F_LIBVER_V110));
-
- /* Should not be marked for SWMR writing mode already */
- if(file->shared->sblock->status_flags & H5F_SUPER_SWMR_WRITE_ACCESS)
- HGOTO_ERROR(H5E_FILE, H5E_BADVALUE, FAIL, "file already in SWMR writing mode")
-
- HDassert(file->shared->sblock->status_flags & H5F_SUPER_WRITE_ACCESS);
-
- /* Check to see if cache image is enabled. Fail if so */
- if(H5C_cache_image_status(file, &ci_load, &ci_write) < 0)
- HGOTO_ERROR(H5E_FILE, H5E_CANTGET, FAIL, "can't get MDC cache image status")
- if(ci_load || ci_write )
- HGOTO_ERROR(H5E_FILE, H5E_UNSUPPORTED, FAIL, "can't have both SWMR and MDC cache image")
-
- /* Flush the superblock extension */
- if(H5F_flush_tagged_metadata(file, file->shared->sblock->ext_addr, H5AC_ind_read_dxpl_id) < 0)
- HGOTO_ERROR(H5E_FILE, H5E_CANTFLUSH, FAIL, "unable to flush superblock extension")
-
- /* Flush data buffers */
- if(H5F__flush(file, H5AC_ind_read_dxpl_id, H5AC_rawdata_dxpl_id, FALSE) < 0)
- HGOTO_ERROR(H5E_FILE, H5E_CANTFLUSH, FAIL, "unable to flush file's cached information")
-
- /* Get the # of opened named datatypes and attributes */
- if(H5F_get_obj_count(file, H5F_OBJ_DATATYPE|H5F_OBJ_ATTR, FALSE, &nt_attr_count) < 0)
- HGOTO_ERROR(H5E_INTERNAL, H5E_BADITER, FAIL, "H5F_get_obj_count failed")
- if(nt_attr_count)
- HGOTO_ERROR(H5E_FILE, H5E_BADVALUE, FAIL, "named datatypes and/or attributes opened in the file")
-
- /* Get the # of opened datasets and groups */
- if(H5F_get_obj_count(file, H5F_OBJ_GROUP|H5F_OBJ_DATASET, FALSE, &grp_dset_count) < 0)
- HGOTO_ERROR(H5E_INTERNAL, H5E_BADITER, FAIL, "H5F_get_obj_count failed")
-
- if(grp_dset_count) {
- /* Allocate space for group and object locations */
- if((obj_ids = (hid_t *) H5MM_malloc(grp_dset_count * sizeof(hid_t))) == NULL)
- HGOTO_ERROR(H5E_FILE, H5E_NOSPACE, FAIL, "can't allocate buffer for hid_t")
- if((obj_glocs = (H5G_loc_t *) H5MM_malloc(grp_dset_count * sizeof(H5G_loc_t))) == NULL)
- HGOTO_ERROR(H5E_FILE, H5E_NOSPACE, FAIL, "can't allocate buffer for H5G_loc_t")
- if((obj_olocs = (H5O_loc_t *) H5MM_malloc(grp_dset_count * sizeof(H5O_loc_t))) == NULL)
- HGOTO_ERROR(H5E_FILE, H5E_NOSPACE, FAIL, "can't allocate buffer for H5O_loc_t")
- if((obj_paths = (H5G_name_t *) H5MM_malloc(grp_dset_count * sizeof(H5G_name_t))) == NULL)
- HGOTO_ERROR(H5E_FILE, H5E_NOSPACE, FAIL, "can't allocate buffer for H5G_name_t")
-
- /* Get the list of opened object ids (groups & datasets) */
- if(H5F_get_obj_ids(file, H5F_OBJ_GROUP|H5F_OBJ_DATASET, grp_dset_count, obj_ids, FALSE, &grp_dset_count) < 0)
- HGOTO_ERROR(H5E_FILE, H5E_CANTGET, FAIL, "H5F_get_obj_ids failed")
-
- /* Refresh opened objects (groups, datasets) in the file */
- for(u = 0; u < grp_dset_count; u++) {
- H5O_loc_t *oloc; /* object location */
- H5G_loc_t tmp_loc;
-
- /* Set up the id's group location */
- obj_glocs[u].oloc = &obj_olocs[u];
- obj_glocs[u].path = &obj_paths[u];
- H5G_loc_reset(&obj_glocs[u]);
-
- /* get the id's object location */
- if((oloc = H5O_get_loc(obj_ids[u])) == NULL)
- HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not an object")
-
- /* Make deep local copy of object's location information */
- H5G_loc(obj_ids[u], &tmp_loc);
- H5G_loc_copy(&obj_glocs[u], &tmp_loc, H5_COPY_DEEP);
-
- /* Close the object */
- if(H5I_dec_ref(obj_ids[u]) < 0)
- HGOTO_ERROR(H5E_ATOM, H5E_CANTCLOSEOBJ, FAIL, "decrementing object ID failed")
- } /* end for */
- } /* end if */
-
- /* Set up I/O info for operation */
- fio_info.f = file;
- if(NULL == (fio_info.meta_dxpl = (H5P_genplist_t *)H5I_object(H5AC_ind_read_dxpl_id)))
- HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "can't get property list")
- if(NULL == (fio_info.raw_dxpl = (H5P_genplist_t *)H5I_object(H5AC_rawdata_dxpl_id)))
- HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "can't get property list")
-
- /* Flush and reset the accumulator */
- if(H5F__accum_reset(&fio_info, TRUE) < 0)
- HGOTO_ERROR(H5E_IO, H5E_CANTRESET, FAIL, "can't reset accumulator")
-
- /* Turn on SWMR write in shared file open flags */
- file->shared->flags |= H5F_ACC_SWMR_WRITE;
-
- /* Mark the file in SWMR writing mode */
- file->shared->sblock->status_flags |= H5F_SUPER_SWMR_WRITE_ACCESS;
-
- /* Set up metadata read attempts */
- file->shared->read_attempts = H5F_SWMR_METADATA_READ_ATTEMPTS;
-
- /* Initialize "retries" and "retries_nbins" */
- if(H5F_set_retries(file) < 0)
- HGOTO_ERROR(H5E_FILE, H5E_CANTINIT, FAIL, "can't set retries and retries_nbins")
-
- /* Turn off usage of accumulator */
- file->shared->feature_flags &= ~(unsigned)H5FD_FEAT_ACCUMULATE_METADATA;
- if(H5FD_set_feature_flags(file->shared->lf, file->shared->feature_flags) < 0)
- HGOTO_ERROR(H5E_FILE, H5E_CANTSET, FAIL, "can't set feature_flags in VFD")
-
- setup = TRUE;
-
- /* Mark superblock as dirty */
- if(H5F_super_dirty(file) < 0)
- HGOTO_ERROR(H5E_FILE, H5E_CANTMARKDIRTY, FAIL, "unable to mark superblock as dirty")
-
- /* Flush the superblock */
- if(H5F_flush_tagged_metadata(file, H5AC__SUPERBLOCK_TAG, H5AC_ind_read_dxpl_id) < 0)
- HGOTO_ERROR(H5E_FILE, H5E_CANTFLUSH, FAIL, "unable to flush superblock")
-
- /* Evict all flushed entries in the cache except the pinned superblock */
- if(H5F__evict_cache_entries(file, H5AC_ind_read_dxpl_id) < 0)
- HGOTO_ERROR(H5E_FILE, H5E_CANTFLUSH, FAIL, "unable to evict file's cached information")
-
- /* Refresh (reopen) the objects (groups & datasets) in the file */
- for(u = 0; u < grp_dset_count; u++)
- if(H5O_refresh_metadata_reopen(obj_ids[u], &obj_glocs[u], H5AC_ind_read_dxpl_id, TRUE) < 0)
- HGOTO_ERROR(H5E_ATOM, H5E_CLOSEERROR, FAIL, "can't refresh-close object")
+ if (NULL == (file = (H5F_t *)H5I_object_verify(file_id, H5I_FILE)))
+ HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "hid_t identifier is not a file ID")
- /* Unlock the file */
- if(H5FD_unlock(file->shared->lf) < 0)
- HGOTO_ERROR(H5E_FILE, H5E_CANTOPENFILE, FAIL, "unable to unlock the file")
+ /* start SWMR writing */
+ if (H5F_start_swmr_write(file) < 0)
+ HGOTO_ERROR(H5E_FILE, H5E_SYSTEM, FAIL, "unable to start SWMR writing")
done:
- if(ret_value < 0 && setup) {
- HDassert(file);
-
- /* Re-enable accumulator */
- file->shared->feature_flags |= (unsigned)H5FD_FEAT_ACCUMULATE_METADATA;
- if(H5FD_set_feature_flags(file->shared->lf, file->shared->feature_flags) < 0)
- HDONE_ERROR(H5E_FILE, H5E_CANTSET, FAIL, "can't set feature_flags in VFD")
-
- /* Reset the # of read attempts */
- file->shared->read_attempts = H5F_METADATA_READ_ATTEMPTS;
- if(H5F_set_retries(file) < 0)
- HDONE_ERROR(H5E_FILE, H5E_CANTINIT, FAIL, "can't set retries and retries_nbins")
-
- /* Un-set H5F_ACC_SWMR_WRITE in shared open flags */
- file->shared->flags &= ~H5F_ACC_SWMR_WRITE;
-
- /* Unmark the file: not in SWMR writing mode */
- file->shared->sblock->status_flags &= (uint8_t)(~H5F_SUPER_SWMR_WRITE_ACCESS);
-
- /* Mark superblock as dirty */
- if(H5F_super_dirty(file) < 0)
- HDONE_ERROR(H5E_FILE, H5E_CANTMARKDIRTY, FAIL, "unable to mark superblock as dirty")
-
- /* Flush the superblock */
- if(H5F_flush_tagged_metadata(file, H5AC__SUPERBLOCK_TAG, H5AC_ind_read_dxpl_id) < 0)
- HDONE_ERROR(H5E_FILE, H5E_CANTFLUSH, FAIL, "unable to flush superblock")
- } /* end if */
-
- /* Free memory */
- if(obj_ids)
- H5MM_xfree(obj_ids);
- if(obj_glocs)
- H5MM_xfree(obj_glocs);
- if(obj_olocs)
- H5MM_xfree(obj_olocs);
- if(obj_paths)
- H5MM_xfree(obj_paths);
-
FUNC_LEAVE_API(ret_value)
} /* end H5Fstart_swmr_write() */
diff --git a/src/H5Fint.c b/src/H5Fint.c
index 24844a4..1d14ec6 100644
--- a/src/H5Fint.c
+++ b/src/H5Fint.c
@@ -2981,3 +2981,321 @@ H5F_set_coll_md_read(H5F_t *f, H5P_coll_md_read_flag_t cmr)
FUNC_LEAVE_NOAPI_VOID
} /* H5F_set_coll_md_read() */
#endif /* H5_HAVE_PARALLEL */
+
+
+/*-------------------------------------------------------------------------
+ * Function: H5F_get_metadata_read_retry_info
+ *
+ * Purpose: Private function to retrieve the collection of read retries
+ * for metadata items with checksum.
+ *
+ * Return: SUCCEED/FAIL
+ *
+ *-------------------------------------------------------------------------
+ */
+herr_t
+H5F_get_metadata_read_retry_info(H5F_t *file, H5F_retry_info_t *info)
+{
+ unsigned i, j; /* Local index variable */
+ size_t tot_size; /* Size of each retries[i] */
+ herr_t ret_value = SUCCEED; /* Return value */
+
+ FUNC_ENTER_NOAPI(FAIL)
+
+ /* Check args */
+ HDassert(file);
+ HDassert(info);
+
+ /* Copy the # of bins for "retries" array */
+ info->nbins = file->shared->retries_nbins;
+
+ /* Initialize the array of "retries" */
+ HDmemset(info->retries, 0, sizeof(info->retries));
+
+ /* Return if there are no bins -- no retries */
+ if (!info->nbins)
+ HGOTO_DONE(SUCCEED);
+
+ /* Calculate size for each retries[i] */
+ tot_size = info->nbins * sizeof(uint32_t);
+
+ /* Map and copy information to info's retries for metadata items with tracking for read retries */
+ j = 0;
+ for (i = 0; i < H5AC_NTYPES; i++) {
+ switch (i) {
+ case H5AC_OHDR_ID:
+ case H5AC_OHDR_CHK_ID:
+ case H5AC_BT2_HDR_ID:
+ case H5AC_BT2_INT_ID:
+ case H5AC_BT2_LEAF_ID:
+ case H5AC_FHEAP_HDR_ID:
+ case H5AC_FHEAP_DBLOCK_ID:
+ case H5AC_FHEAP_IBLOCK_ID:
+ case H5AC_FSPACE_HDR_ID:
+ case H5AC_FSPACE_SINFO_ID:
+ case H5AC_SOHM_TABLE_ID:
+ case H5AC_SOHM_LIST_ID:
+ case H5AC_EARRAY_HDR_ID:
+ case H5AC_EARRAY_IBLOCK_ID:
+ case H5AC_EARRAY_SBLOCK_ID:
+ case H5AC_EARRAY_DBLOCK_ID:
+ case H5AC_EARRAY_DBLK_PAGE_ID:
+ case H5AC_FARRAY_HDR_ID:
+ case H5AC_FARRAY_DBLOCK_ID:
+ case H5AC_FARRAY_DBLK_PAGE_ID:
+ case H5AC_SUPERBLOCK_ID:
+ HDassert(j < H5F_NUM_METADATA_READ_RETRY_TYPES);
+ if (file->shared->retries[i] != NULL) {
+ /* Allocate memory for retries[i]
+ *
+ * This memory should be released by the user with
+ * the H5free_memory() call.
+ */
+ if (NULL == (info->retries[j] = (uint32_t *)H5MM_malloc(tot_size)))
+ HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL, "memory allocation failed")
+
+ /* Copy the information */
+ HDmemcpy(info->retries[j], file->shared->retries[i], tot_size);
+ }
+
+ /* Increment location in info->retries[] array */
+ j++;
+ break;
+
+ default:
+ break;
+ }
+ }
+
+done:
+ FUNC_LEAVE_NOAPI(ret_value)
+} /* end H5F_get_metadata_read_retry_info() */
+
+
+/*-------------------------------------------------------------------------
+ * Function: H5F_start_swmr_write
+ *
+ * Purpose: To enable SWMR writing mode for the file
+ *
+ * 1) Refresh opened objects: part 1
+ * 2) Flush & reset accumulator
+ * 3) Mark the file in SWMR writing mode
+ * 4) Set metadata read attempts and retries info
+ * 5) Disable accumulator
+ * 6) Evict all cache entries except the superblock
+ * 7) Refresh opened objects (part 2)
+ * 8) Unlock the file
+ *
+ * Pre-conditions:
+ *
+ * 1) The file being opened has v3 superblock
+ * 2) The file is opened with H5F_ACC_RDWR
+ * 3) The file is not already marked for SWMR writing
+ * 4) Current implementaion for opened objects:
+ * --only allow datasets and groups without attributes
+ * --disallow named datatype with/without attributes
+ * --disallow opened attributes attached to objects
+ *
+ * NOTE: Currently, only opened groups and datasets are allowed
+ * when enabling SWMR via H5Fstart_swmr_write().
+ * Will later implement a different approach--
+ * set up flush dependency/proxy even for file opened without
+ * SWMR to resolve issues with opened objects.
+ *
+ * Return: SUCCEED/FAIL
+ *
+ *-------------------------------------------------------------------------
+ */
+herr_t
+H5F_start_swmr_write(H5F_t *file)
+{
+ hbool_t ci_load = FALSE; /* whether MDC ci load requested */
+ hbool_t ci_write = FALSE; /* whether MDC CI write requested */
+ size_t grp_dset_count=0; /* # of open objects: groups & datasets */
+ size_t nt_attr_count=0; /* # of opened named datatypes + opened attributes */
+ hid_t *obj_ids = NULL; /* List of ids */
+ H5G_loc_t *obj_glocs = NULL; /* Group location of the object */
+ H5O_loc_t *obj_olocs = NULL; /* Object location */
+ H5G_name_t *obj_paths = NULL; /* Group hierarchy path */
+ size_t u; /* Local index variable */
+ hbool_t setup = FALSE; /* Boolean flag to indicate whether SWMR setting is enabled */
+ H5F_io_info2_t fio_info; /* I/O info for operation */
+ herr_t ret_value = SUCCEED; /* Return value */
+
+ FUNC_ENTER_NOAPI(FAIL)
+
+ /* check args */
+ HDassert(file);
+
+ /* Should have write permission */
+ if ((H5F_INTENT(file) & H5F_ACC_RDWR) == 0)
+ HGOTO_ERROR(H5E_FILE, H5E_BADVALUE, FAIL, "no write intent on file")
+
+ /* Check superblock version */
+ if (file->shared->sblock->super_vers < HDF5_SUPERBLOCK_VERSION_3)
+ HGOTO_ERROR(H5E_FILE, H5E_BADVALUE, FAIL, "file superblock version - should be at least 3")
+
+ /* Check for correct file format version */
+ if ((file->shared->low_bound != H5F_LIBVER_V110) || (file->shared->high_bound != H5F_LIBVER_V110))
+ HGOTO_ERROR(H5E_FILE, H5E_BADVALUE, FAIL, "file format version does not support SWMR - needs to be 1.10 or greater")
+
+ /* Should not be marked for SWMR writing mode already */
+ if (file->shared->sblock->status_flags & H5F_SUPER_SWMR_WRITE_ACCESS)
+ HGOTO_ERROR(H5E_FILE, H5E_BADVALUE, FAIL, "file already in SWMR writing mode")
+
+ /* Check to see if cache image is enabled. Fail if so */
+ if (H5C_cache_image_status(file, &ci_load, &ci_write) < 0)
+ HGOTO_ERROR(H5E_FILE, H5E_CANTGET, FAIL, "can't get MDC cache image status")
+ if (ci_load || ci_write )
+ HGOTO_ERROR(H5E_FILE, H5E_UNSUPPORTED, FAIL, "can't have both SWMR and MDC cache image")
+
+ /* Flush the superblock extension */
+ if (H5F_flush_tagged_metadata(file, file->shared->sblock->ext_addr, H5AC_ind_read_dxpl_id) < 0)
+ HGOTO_ERROR(H5E_FILE, H5E_CANTFLUSH, FAIL, "unable to flush superblock extension")
+
+ /* Flush data buffers */
+ if (H5F__flush(file, H5AC_ind_read_dxpl_id, H5AC_rawdata_dxpl_id, FALSE) < 0)
+ HGOTO_ERROR(H5E_FILE, H5E_CANTFLUSH, FAIL, "unable to flush file's cached information")
+
+ /* Get the # of opened named datatypes and attributes */
+ if (H5F_get_obj_count(file, H5F_OBJ_DATATYPE|H5F_OBJ_ATTR, FALSE, &nt_attr_count) < 0)
+ HGOTO_ERROR(H5E_INTERNAL, H5E_BADITER, FAIL, "H5F_get_obj_count failed")
+ if (nt_attr_count)
+ HGOTO_ERROR(H5E_FILE, H5E_BADVALUE, FAIL, "named datatypes and/or attributes opened in the file")
+
+ /* Get the # of opened datasets and groups */
+ if (H5F_get_obj_count(file, H5F_OBJ_GROUP|H5F_OBJ_DATASET, FALSE, &grp_dset_count) < 0)
+ HGOTO_ERROR(H5E_INTERNAL, H5E_BADITER, FAIL, "H5F_get_obj_count failed")
+
+ if (grp_dset_count) {
+ /* Allocate space for group and object locations */
+ if ((obj_ids = (hid_t *) H5MM_malloc(grp_dset_count * sizeof(hid_t))) == NULL)
+ HGOTO_ERROR(H5E_FILE, H5E_NOSPACE, FAIL, "can't allocate buffer for hid_t")
+ if ((obj_glocs = (H5G_loc_t *) H5MM_malloc(grp_dset_count * sizeof(H5G_loc_t))) == NULL)
+ HGOTO_ERROR(H5E_FILE, H5E_NOSPACE, FAIL, "can't allocate buffer for H5G_loc_t")
+ if ((obj_olocs = (H5O_loc_t *) H5MM_malloc(grp_dset_count * sizeof(H5O_loc_t))) == NULL)
+ HGOTO_ERROR(H5E_FILE, H5E_NOSPACE, FAIL, "can't allocate buffer for H5O_loc_t")
+ if ((obj_paths = (H5G_name_t *) H5MM_malloc(grp_dset_count * sizeof(H5G_name_t))) == NULL)
+ HGOTO_ERROR(H5E_FILE, H5E_NOSPACE, FAIL, "can't allocate buffer for H5G_name_t")
+
+ /* Get the list of opened object ids (groups & datasets) */
+ if (H5F_get_obj_ids(file, H5F_OBJ_GROUP|H5F_OBJ_DATASET, grp_dset_count, obj_ids, FALSE, &grp_dset_count) < 0)
+ HGOTO_ERROR(H5E_FILE, H5E_CANTGET, FAIL, "H5F_get_obj_ids failed")
+
+ /* Refresh opened objects (groups, datasets) in the file */
+ for (u = 0; u < grp_dset_count; u++) {
+ H5O_loc_t *oloc; /* object location */
+ H5G_loc_t tmp_loc;
+
+ /* Set up the id's group location */
+ obj_glocs[u].oloc = &obj_olocs[u];
+ obj_glocs[u].path = &obj_paths[u];
+ H5G_loc_reset(&obj_glocs[u]);
+
+ /* get the id's object location */
+ if ((oloc = H5O_get_loc(obj_ids[u])) == NULL)
+ HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not an object")
+
+ /* Make deep local copy of object's location information */
+ H5G_loc(obj_ids[u], &tmp_loc);
+ H5G_loc_copy(&obj_glocs[u], &tmp_loc, H5_COPY_DEEP);
+
+ /* Close the object */
+ if (H5I_dec_ref(obj_ids[u]) < 0)
+ HGOTO_ERROR(H5E_ATOM, H5E_CANTCLOSEOBJ, FAIL, "decrementing object ID failed")
+ }
+ }
+
+ /* Set up I/O info for operation */
+ fio_info.f = file;
+ if (NULL == (fio_info.meta_dxpl = (H5P_genplist_t *)H5I_object(H5AC_ind_read_dxpl_id)))
+ HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "can't get property list")
+ if (NULL == (fio_info.raw_dxpl = (H5P_genplist_t *)H5I_object(H5AC_rawdata_dxpl_id)))
+ HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "can't get property list")
+
+ /* Flush and reset the accumulator */
+ if (H5F__accum_reset(&fio_info, TRUE) < 0)
+ HGOTO_ERROR(H5E_IO, H5E_CANTRESET, FAIL, "can't reset accumulator")
+
+ /* Turn on SWMR write in shared file open flags */
+ file->shared->flags |= H5F_ACC_SWMR_WRITE;
+
+ /* Mark the file in SWMR writing mode */
+ file->shared->sblock->status_flags |= H5F_SUPER_SWMR_WRITE_ACCESS;
+
+ /* Set up metadata read attempts */
+ file->shared->read_attempts = H5F_SWMR_METADATA_READ_ATTEMPTS;
+
+ /* Initialize "retries" and "retries_nbins" */
+ if (H5F_set_retries(file) < 0)
+ HGOTO_ERROR(H5E_FILE, H5E_CANTINIT, FAIL, "can't set retries and retries_nbins")
+
+ /* Turn off usage of accumulator */
+ file->shared->feature_flags &= ~(unsigned)H5FD_FEAT_ACCUMULATE_METADATA;
+ if (H5FD_set_feature_flags(file->shared->lf, file->shared->feature_flags) < 0)
+ HGOTO_ERROR(H5E_FILE, H5E_CANTSET, FAIL, "can't set feature_flags in VFD")
+
+ setup = TRUE;
+
+ /* Mark superblock as dirty */
+ if (H5F_super_dirty(file) < 0)
+ HGOTO_ERROR(H5E_FILE, H5E_CANTMARKDIRTY, FAIL, "unable to mark superblock as dirty")
+
+ /* Flush the superblock */
+ if (H5F_flush_tagged_metadata(file, H5AC__SUPERBLOCK_TAG, H5AC_ind_read_dxpl_id) < 0)
+ HGOTO_ERROR(H5E_FILE, H5E_CANTFLUSH, FAIL, "unable to flush superblock")
+
+ /* Evict all flushed entries in the cache except the pinned superblock */
+ if (H5F__evict_cache_entries(file, H5AC_ind_read_dxpl_id) < 0)
+ HGOTO_ERROR(H5E_FILE, H5E_CANTFLUSH, FAIL, "unable to evict file's cached information")
+
+ /* Refresh (reopen) the objects (groups & datasets) in the file */
+ for (u = 0; u < grp_dset_count; u++)
+ if (H5O_refresh_metadata_reopen(obj_ids[u], &obj_glocs[u], H5AC_ind_read_dxpl_id, TRUE) < 0)
+ HGOTO_ERROR(H5E_ATOM, H5E_CLOSEERROR, FAIL, "can't refresh-close object")
+
+ /* Unlock the file */
+ if (H5FD_unlock(file->shared->lf) < 0)
+ HGOTO_ERROR(H5E_FILE, H5E_CANTOPENFILE, FAIL, "unable to unlock the file")
+
+done:
+ if(ret_value < 0 && setup) {
+
+ /* Re-enable accumulator */
+ file->shared->feature_flags |= (unsigned)H5FD_FEAT_ACCUMULATE_METADATA;
+ if (H5FD_set_feature_flags(file->shared->lf, file->shared->feature_flags) < 0)
+ HDONE_ERROR(H5E_FILE, H5E_CANTSET, FAIL, "can't set feature_flags in VFD")
+
+ /* Reset the # of read attempts */
+ file->shared->read_attempts = H5F_METADATA_READ_ATTEMPTS;
+ if (H5F_set_retries(file) < 0)
+ HDONE_ERROR(H5E_FILE, H5E_CANTINIT, FAIL, "can't set retries and retries_nbins")
+
+ /* Un-set H5F_ACC_SWMR_WRITE in shared open flags */
+ file->shared->flags &= ~H5F_ACC_SWMR_WRITE;
+
+ /* Unmark the file: not in SWMR writing mode */
+ file->shared->sblock->status_flags &= (uint8_t)(~H5F_SUPER_SWMR_WRITE_ACCESS);
+
+ /* Mark superblock as dirty */
+ if (H5F_super_dirty(file) < 0)
+ HDONE_ERROR(H5E_FILE, H5E_CANTMARKDIRTY, FAIL, "unable to mark superblock as dirty")
+
+ /* Flush the superblock */
+ if (H5F_flush_tagged_metadata(file, H5AC__SUPERBLOCK_TAG, H5AC_ind_read_dxpl_id) < 0)
+ HDONE_ERROR(H5E_FILE, H5E_CANTFLUSH, FAIL, "unable to flush superblock")
+ }
+
+ /* Free memory */
+ if (obj_ids)
+ H5MM_xfree(obj_ids);
+ if (obj_glocs)
+ H5MM_xfree(obj_glocs);
+ if (obj_olocs)
+ H5MM_xfree(obj_olocs);
+ if (obj_paths)
+ H5MM_xfree(obj_paths);
+
+ FUNC_LEAVE_NOAPI(ret_value)
+} /* end H5F_start_swmr_write() */
+
diff --git a/src/H5Fprivate.h b/src/H5Fprivate.h
index 28ebbd2..a53ca24 100644
--- a/src/H5Fprivate.h
+++ b/src/H5Fprivate.h
@@ -723,6 +723,7 @@ typedef enum H5F_mem_page_t {
H5_DLL H5F_t *H5F_open(const char *name, unsigned flags, hid_t fcpl_id,
hid_t fapl_id, hid_t dxpl_id);
H5_DLL herr_t H5F_try_close(H5F_t *f, hbool_t *was_closed/*out*/);
+H5_DLL herr_t H5F_start_swmr_write(H5F_t *file);
/* Functions that retrieve values from the file struct */
H5_DLL H5F_libver_t H5F_get_low_bound(const H5F_t *f);
@@ -817,6 +818,7 @@ H5_DLL herr_t H5F_get_checksums(const uint8_t *buf, size_t chk_size, uint32_t *s
/* Routine to track the # of retries */
H5_DLL herr_t H5F_track_metadata_read_retries(H5F_t *f, unsigned actype, unsigned retries);
H5_DLL herr_t H5F_set_retries(H5F_t *f);
+H5_DLL herr_t H5F_get_metadata_read_retry_info(H5F_t *file, H5F_retry_info_t *info);
/* Routine to invoke callback function upon object flush */
H5_DLL herr_t H5F_object_flush_cb(H5F_t *f, hid_t obj_id);