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author | Allen Byrne <byrn@hdfgroup.org> | 2019-10-02 21:26:59 (GMT) |
---|---|---|
committer | Allen Byrne <byrn@hdfgroup.org> | 2019-10-02 21:26:59 (GMT) |
commit | 5152a39cb914dddda986e51c7db8b3f0375a7c22 (patch) | |
tree | 04d4a355c483f5c68c1d41f6bd2bd3216984fe11 | |
parent | 0728ef8352f9b6a6fb697282f31a071a812d0a9e (diff) | |
parent | d7b76fdf9d39d98bf4fcf48bf342dcc7b18da3cd (diff) | |
download | hdf5-5152a39cb914dddda986e51c7db8b3f0375a7c22.zip hdf5-5152a39cb914dddda986e51c7db8b3f0375a7c22.tar.gz hdf5-5152a39cb914dddda986e51c7db8b3f0375a7c22.tar.bz2 |
Merge pull request #1977 in HDFFV/hdf5 from ~BYRN/hdf5_adb:hdf5_1_8 to hdf5_1_8
* commit 'd7b76fdf9d39d98bf4fcf48bf342dcc7b18da3cd':
HDFFV-10919 merge external storage repack
36 files changed, 1696 insertions, 1013 deletions
@@ -2084,10 +2084,23 @@ ./tools/h5repack/testfiles/h5repack_early.h5 ./tools/h5repack/testfiles/h5repack_ext.bin ./tools/h5repack/testfiles/h5repack_ext.h5 +./tools/h5repack/testfiles/h5repack_f32le.h5 +./tools/h5repack/testfiles/h5repack_f32le_ex-0.dat +./tools/h5repack/testfiles/h5repack_f32le_ex.h5 ./tools/h5repack/testfiles/h5repack_fill.h5 ./tools/h5repack/testfiles/h5repack_filters.h5 ./tools/h5repack/testfiles/h5repack_fletcher.h5 ./tools/h5repack/testfiles/h5repack_hlink.h5 +./tools/h5repack/testfiles/h5repack_int32le_1d.h5 +./tools/h5repack/testfiles/h5repack_int32le_1d_ex-0.dat +./tools/h5repack/testfiles/h5repack_int32le_1d_ex-1.dat +./tools/h5repack/testfiles/h5repack_int32le_1d_ex.h5 +./tools/h5repack/testfiles/h5repack_int32le_2d.h5 +./tools/h5repack/testfiles/h5repack_int32le_2d_ex-0.dat +./tools/h5repack/testfiles/h5repack_int32le_2d_ex.h5 +./tools/h5repack/testfiles/h5repack_int32le_3d.h5 +./tools/h5repack/testfiles/h5repack_int32le_3d_ex-0.dat +./tools/h5repack/testfiles/h5repack_int32le_3d_ex.h5 ./tools/h5repack/testfiles/h5repack.info ./tools/h5repack/testfiles/h5repack_layout.h5 ./tools/h5repack/testfiles/h5repack_layouto.h5 @@ -2104,6 +2117,12 @@ ./tools/h5repack/testfiles/h5repack_shuffle.h5 ./tools/h5repack/testfiles/h5repack_soffset.h5 ./tools/h5repack/testfiles/h5repack_szip.h5 +./tools/h5repack/testfiles/h5repack_uint8be.h5 +./tools/h5repack/testfiles/h5repack_uint8be_ex-0.dat +./tools/h5repack/testfiles/h5repack_uint8be_ex-1.dat +./tools/h5repack/testfiles/h5repack_uint8be_ex-2.dat +./tools/h5repack/testfiles/h5repack_uint8be_ex-3.dat +./tools//h5repack/testfiles/h5repack_uint8be_ex.h5 ./tools/h5repack/testfiles/ublock.bin ./tools/h5repack/testfiles/crtorder.tordergr.h5.ddl ./tools/h5repack/testfiles/deflate_limit.h5repack_layout.h5.ddl diff --git a/release_docs/RELEASE.txt b/release_docs/RELEASE.txt index 23f3652..5262df3 100644 --- a/release_docs/RELEASE.txt +++ b/release_docs/RELEASE.txt @@ -277,7 +277,13 @@ Bug Fixes since HDF5-1.8.21 Tools ----- - - None + - h5repack was fixed to repack datasets with external storage + to other types of storage. + + New test added to repack files and verify the correct data using h5diff. + + (JS - 2019/09/25, HDFFV-10408) + (ADB - 2019/10/02, HDFFV-10918) Fortran API diff --git a/src/H5Edefin.h b/src/H5Edefin.h index 6c0e794..4cc6115 100644 --- a/src/H5Edefin.h +++ b/src/H5Edefin.h @@ -19,48 +19,40 @@ #define _H5Edefin_H /* Major error IDs */ -hid_t H5E_DATASET_g = FAIL; /* Dataset */ -hid_t H5E_FUNC_g = FAIL; /* Function entry/exit */ -hid_t H5E_STORAGE_g = FAIL; /* Data storage */ -hid_t H5E_FILE_g = FAIL; /* File accessibilty */ -hid_t H5E_SOHM_g = FAIL; /* Shared Object Header Messages */ -hid_t H5E_SYM_g = FAIL; /* Symbol table */ -hid_t H5E_PLUGIN_g = FAIL; /* Plugin for dynamically loaded library */ -hid_t H5E_VFL_g = FAIL; /* Virtual File Layer */ -hid_t H5E_INTERNAL_g = FAIL; /* Internal error (too specific to document in detail) */ -hid_t H5E_BTREE_g = FAIL; /* B-Tree node */ -hid_t H5E_REFERENCE_g = FAIL; /* References */ -hid_t H5E_DATASPACE_g = FAIL; /* Dataspace */ -hid_t H5E_RESOURCE_g = FAIL; /* Resource unavailable */ -hid_t H5E_PLIST_g = FAIL; /* Property lists */ -hid_t H5E_LINK_g = FAIL; /* Links */ -hid_t H5E_DATATYPE_g = FAIL; /* Datatype */ -hid_t H5E_RS_g = FAIL; /* Reference Counted Strings */ -hid_t H5E_HEAP_g = FAIL; /* Heap */ -hid_t H5E_OHDR_g = FAIL; /* Object header */ -hid_t H5E_ATOM_g = FAIL; /* Object atom */ -hid_t H5E_ATTR_g = FAIL; /* Attribute */ +hid_t H5E_FSPACE_g = FAIL; /* Free Space Manager */ +hid_t H5E_SLIST_g = FAIL; /* Skip Lists */ hid_t H5E_NONE_MAJOR_g = FAIL; /* No error */ hid_t H5E_IO_g = FAIL; /* Low-level I/O */ -hid_t H5E_SLIST_g = FAIL; /* Skip Lists */ -hid_t H5E_EFL_g = FAIL; /* External file list */ -hid_t H5E_TST_g = FAIL; /* Ternary Search Trees */ +hid_t H5E_REFERENCE_g = FAIL; /* References */ +hid_t H5E_RESOURCE_g = FAIL; /* Resource unavailable */ hid_t H5E_ARGS_g = FAIL; /* Invalid arguments to routine */ +hid_t H5E_ATTR_g = FAIL; /* Attribute */ +hid_t H5E_OHDR_g = FAIL; /* Object header */ hid_t H5E_ERROR_g = FAIL; /* Error API */ hid_t H5E_PLINE_g = FAIL; /* Data filters */ -hid_t H5E_FSPACE_g = FAIL; /* Free Space Manager */ +hid_t H5E_TST_g = FAIL; /* Ternary Search Trees */ +hid_t H5E_DATATYPE_g = FAIL; /* Datatype */ +hid_t H5E_LINK_g = FAIL; /* Links */ +hid_t H5E_SYM_g = FAIL; /* Symbol table */ +hid_t H5E_EFL_g = FAIL; /* External file list */ +hid_t H5E_PLIST_g = FAIL; /* Property lists */ +hid_t H5E_PLUGIN_g = FAIL; /* Plugin for dynamically loaded library */ +hid_t H5E_FILE_g = FAIL; /* File accessibilty */ +hid_t H5E_SOHM_g = FAIL; /* Shared Object Header Messages */ +hid_t H5E_VFL_g = FAIL; /* Virtual File Layer */ hid_t H5E_CACHE_g = FAIL; /* Object cache */ +hid_t H5E_STORAGE_g = FAIL; /* Data storage */ +hid_t H5E_HEAP_g = FAIL; /* Heap */ +hid_t H5E_RS_g = FAIL; /* Reference Counted Strings */ +hid_t H5E_FUNC_g = FAIL; /* Function entry/exit */ +hid_t H5E_ATOM_g = FAIL; /* Object atom */ +hid_t H5E_DATASET_g = FAIL; /* Dataset */ +hid_t H5E_INTERNAL_g = FAIL; /* Internal error (too specific to document in detail) */ +hid_t H5E_DATASPACE_g = FAIL; /* Dataspace */ +hid_t H5E_BTREE_g = FAIL; /* B-Tree node */ /* Minor error IDs */ -/* Generic low-level file I/O errors */ -hid_t H5E_SEEKERROR_g = FAIL; /* Seek failed */ -hid_t H5E_READERROR_g = FAIL; /* Read failed */ -hid_t H5E_WRITEERROR_g = FAIL; /* Write failed */ -hid_t H5E_CLOSEERROR_g = FAIL; /* Close failed */ -hid_t H5E_OVERFLOW_g = FAIL; /* Address overflowed */ -hid_t H5E_FCNTL_g = FAIL; /* File control (fcntl) failed */ - /* Resource errors */ hid_t H5E_NOSPACE_g = FAIL; /* No space available for allocation */ hid_t H5E_CANTALLOC_g = FAIL; /* Can't allocate space */ @@ -73,30 +65,12 @@ hid_t H5E_CANTGC_g = FAIL; /* Unable to garbage collect */ hid_t H5E_CANTGETSIZE_g = FAIL; /* Unable to compute size */ hid_t H5E_OBJOPEN_g = FAIL; /* Object is already open */ -/* Heap errors */ -hid_t H5E_CANTRESTORE_g = FAIL; /* Can't restore condition */ -hid_t H5E_CANTCOMPUTE_g = FAIL; /* Can't compute value */ -hid_t H5E_CANTEXTEND_g = FAIL; /* Can't extend heap's space */ -hid_t H5E_CANTATTACH_g = FAIL; /* Can't attach object */ -hid_t H5E_CANTUPDATE_g = FAIL; /* Can't update object */ -hid_t H5E_CANTOPERATE_g = FAIL; /* Can't operate on object */ - -/* Function entry/exit interface errors */ -hid_t H5E_CANTINIT_g = FAIL; /* Unable to initialize object */ -hid_t H5E_ALREADYINIT_g = FAIL; /* Object already initialized */ -hid_t H5E_CANTRELEASE_g = FAIL; /* Unable to release object */ - /* Property list errors */ hid_t H5E_CANTGET_g = FAIL; /* Can't get value */ hid_t H5E_CANTSET_g = FAIL; /* Can't set value */ hid_t H5E_DUPCLASS_g = FAIL; /* Duplicate class name in parent class */ hid_t H5E_SETDISALLOWED_g = FAIL; /* Disallowed operation */ -/* Free space errors */ -hid_t H5E_CANTMERGE_g = FAIL; /* Can't merge objects */ -hid_t H5E_CANTREVIVE_g = FAIL; /* Can't revive object */ -hid_t H5E_CANTSHRINK_g = FAIL; /* Can't shrink container */ - /* Object header related errors */ hid_t H5E_LINKCOUNT_g = FAIL; /* Bad object header link count */ hid_t H5E_VERSION_g = FAIL; /* Wrong version number */ @@ -108,29 +82,9 @@ hid_t H5E_CANTPACK_g = FAIL; /* Can't pack messages */ hid_t H5E_CANTRESET_g = FAIL; /* Can't reset object */ hid_t H5E_CANTRENAME_g = FAIL; /* Unable to rename object */ -/* System level errors */ -hid_t H5E_SYSERRSTR_g = FAIL; /* System error message */ - -/* I/O pipeline errors */ -hid_t H5E_NOFILTER_g = FAIL; /* Requested filter is not available */ -hid_t H5E_CALLBACK_g = FAIL; /* Callback failed */ -hid_t H5E_CANAPPLY_g = FAIL; /* Error from filter 'can apply' callback */ -hid_t H5E_SETLOCAL_g = FAIL; /* Error from filter 'set local' callback */ -hid_t H5E_NOENCODER_g = FAIL; /* Filter present but encoding disabled */ -hid_t H5E_CANTFILTER_g = FAIL; /* Filter operation failed */ - -/* Group related errors */ -hid_t H5E_CANTOPENOBJ_g = FAIL; /* Can't open object */ -hid_t H5E_CANTCLOSEOBJ_g = FAIL; /* Can't close object */ -hid_t H5E_COMPLEN_g = FAIL; /* Name component is too long */ -hid_t H5E_PATH_g = FAIL; /* Problem with path to object */ - /* No error */ hid_t H5E_NONE_MINOR_g = FAIL; /* No error */ -/* Plugin errors */ -hid_t H5E_OPENERROR_g = FAIL; /* Can't open directory or file */ - /* File accessibilty errors */ hid_t H5E_FILEEXISTS_g = FAIL; /* File already exists */ hid_t H5E_FILEOPEN_g = FAIL; /* File already open */ @@ -150,6 +104,22 @@ hid_t H5E_CANTINC_g = FAIL; /* Unable to increment reference count * hid_t H5E_CANTDEC_g = FAIL; /* Unable to decrement reference count */ hid_t H5E_NOIDS_g = FAIL; /* Out of IDs for group */ +/* Plugin errors */ +hid_t H5E_OPENERROR_g = FAIL; /* Can't open directory or file */ + +/* Dataspace errors */ +hid_t H5E_CANTCLIP_g = FAIL; /* Can't clip hyperslab region */ +hid_t H5E_CANTCOUNT_g = FAIL; /* Can't count elements */ +hid_t H5E_CANTSELECT_g = FAIL; /* Can't select hyperslab */ +hid_t H5E_CANTNEXT_g = FAIL; /* Can't move to next iterator location */ +hid_t H5E_BADSELECT_g = FAIL; /* Invalid selection */ +hid_t H5E_CANTCOMPARE_g = FAIL; /* Can't compare objects */ + +/* Parallel MPI errors */ +hid_t H5E_MPI_g = FAIL; /* Some MPI function failed */ +hid_t H5E_MPIERRSTR_g = FAIL; /* MPI Error String */ +hid_t H5E_CANTRECV_g = FAIL; /* Can't receive data */ + /* Cache related errors */ hid_t H5E_CANTFLUSH_g = FAIL; /* Unable to flush data from cache */ hid_t H5E_CANTSERIALIZE_g = FAIL; /* Unable to serialize data from cache */ @@ -167,6 +137,14 @@ hid_t H5E_CANTDIRTY_g = FAIL; /* Unable to mark metadata as dirty */ hid_t H5E_CANTEXPUNGE_g = FAIL; /* Unable to expunge a metadata cache entry */ hid_t H5E_CANTRESIZE_g = FAIL; /* Unable to resize a metadata cache entry */ +/* Heap errors */ +hid_t H5E_CANTRESTORE_g = FAIL; /* Can't restore condition */ +hid_t H5E_CANTCOMPUTE_g = FAIL; /* Can't compute value */ +hid_t H5E_CANTEXTEND_g = FAIL; /* Can't extend heap's space */ +hid_t H5E_CANTATTACH_g = FAIL; /* Can't attach object */ +hid_t H5E_CANTUPDATE_g = FAIL; /* Can't update object */ +hid_t H5E_CANTOPERATE_g = FAIL; /* Can't operate on object */ + /* Link related errors */ hid_t H5E_TRAVERSE_g = FAIL; /* Link traversal failure */ hid_t H5E_NLINKS_g = FAIL; /* Too many soft links in path */ @@ -174,26 +152,6 @@ hid_t H5E_NOTREGISTERED_g = FAIL; /* Link class not registered */ hid_t H5E_CANTMOVE_g = FAIL; /* Can't move object */ hid_t H5E_CANTSORT_g = FAIL; /* Can't sort objects */ -/* Parallel MPI errors */ -hid_t H5E_MPI_g = FAIL; /* Some MPI function failed */ -hid_t H5E_MPIERRSTR_g = FAIL; /* MPI Error String */ -hid_t H5E_CANTRECV_g = FAIL; /* Can't receive data */ - -/* Dataspace errors */ -hid_t H5E_CANTCLIP_g = FAIL; /* Can't clip hyperslab region */ -hid_t H5E_CANTCOUNT_g = FAIL; /* Can't count elements */ -hid_t H5E_CANTSELECT_g = FAIL; /* Can't select hyperslab */ -hid_t H5E_CANTNEXT_g = FAIL; /* Can't move to next iterator location */ -hid_t H5E_BADSELECT_g = FAIL; /* Invalid selection */ -hid_t H5E_CANTCOMPARE_g = FAIL; /* Can't compare objects */ - -/* Argument errors */ -hid_t H5E_UNINITIALIZED_g = FAIL; /* Information is uinitialized */ -hid_t H5E_UNSUPPORTED_g = FAIL; /* Feature is unsupported */ -hid_t H5E_BADTYPE_g = FAIL; /* Inappropriate type */ -hid_t H5E_BADRANGE_g = FAIL; /* Out of range */ -hid_t H5E_BADVALUE_g = FAIL; /* Bad value */ - /* B-tree related errors */ hid_t H5E_NOTFOUND_g = FAIL; /* Object not found */ hid_t H5E_EXISTS_g = FAIL; /* Object already exists */ @@ -207,8 +165,50 @@ hid_t H5E_CANTLIST_g = FAIL; /* Unable to list node */ hid_t H5E_CANTMODIFY_g = FAIL; /* Unable to modify record */ hid_t H5E_CANTREMOVE_g = FAIL; /* Unable to remove object */ +/* I/O pipeline errors */ +hid_t H5E_NOFILTER_g = FAIL; /* Requested filter is not available */ +hid_t H5E_CALLBACK_g = FAIL; /* Callback failed */ +hid_t H5E_CANAPPLY_g = FAIL; /* Error from filter 'can apply' callback */ +hid_t H5E_SETLOCAL_g = FAIL; /* Error from filter 'set local' callback */ +hid_t H5E_NOENCODER_g = FAIL; /* Filter present but encoding disabled */ +hid_t H5E_CANTFILTER_g = FAIL; /* Filter operation failed */ + +/* Function entry/exit interface errors */ +hid_t H5E_CANTINIT_g = FAIL; /* Unable to initialize object */ +hid_t H5E_ALREADYINIT_g = FAIL; /* Object already initialized */ +hid_t H5E_CANTRELEASE_g = FAIL; /* Unable to release object */ + +/* Group related errors */ +hid_t H5E_CANTOPENOBJ_g = FAIL; /* Can't open object */ +hid_t H5E_CANTCLOSEOBJ_g = FAIL; /* Can't close object */ +hid_t H5E_COMPLEN_g = FAIL; /* Name component is too long */ +hid_t H5E_PATH_g = FAIL; /* Problem with path to object */ + +/* Generic low-level file I/O errors */ +hid_t H5E_SEEKERROR_g = FAIL; /* Seek failed */ +hid_t H5E_READERROR_g = FAIL; /* Read failed */ +hid_t H5E_WRITEERROR_g = FAIL; /* Write failed */ +hid_t H5E_CLOSEERROR_g = FAIL; /* Close failed */ +hid_t H5E_OVERFLOW_g = FAIL; /* Address overflowed */ +hid_t H5E_FCNTL_g = FAIL; /* File control (fcntl) failed */ + +/* Free space errors */ +hid_t H5E_CANTMERGE_g = FAIL; /* Can't merge objects */ +hid_t H5E_CANTREVIVE_g = FAIL; /* Can't revive object */ +hid_t H5E_CANTSHRINK_g = FAIL; /* Can't shrink container */ + +/* System level errors */ +hid_t H5E_SYSERRSTR_g = FAIL; /* System error message */ + /* Datatype conversion errors */ hid_t H5E_CANTCONVERT_g = FAIL; /* Can't convert datatypes */ hid_t H5E_BADSIZE_g = FAIL; /* Bad size for object */ +/* Argument errors */ +hid_t H5E_UNINITIALIZED_g = FAIL; /* Information is uinitialized */ +hid_t H5E_UNSUPPORTED_g = FAIL; /* Feature is unsupported */ +hid_t H5E_BADTYPE_g = FAIL; /* Inappropriate type */ +hid_t H5E_BADRANGE_g = FAIL; /* Out of range */ +hid_t H5E_BADVALUE_g = FAIL; /* Bad value */ + #endif /* H5Edefin_H */ diff --git a/src/H5Einit.h b/src/H5Einit.h index eeca33e..53bfb6b 100644 --- a/src/H5Einit.h +++ b/src/H5Einit.h @@ -22,199 +22,167 @@ /* Major error codes */ /*********************/ -HDassert(H5E_DATASET_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MAJOR, "Dataset"))==NULL) - HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_DATASET_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) - HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -HDassert(H5E_FUNC_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MAJOR, "Function entry/exit"))==NULL) - HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_FUNC_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) - HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -HDassert(H5E_STORAGE_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MAJOR, "Data storage"))==NULL) - HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_STORAGE_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) - HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -HDassert(H5E_FILE_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MAJOR, "File accessibilty"))==NULL) - HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_FILE_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) - HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -HDassert(H5E_SOHM_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MAJOR, "Shared Object Header Messages"))==NULL) - HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_SOHM_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) - HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -HDassert(H5E_SYM_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MAJOR, "Symbol table"))==NULL) - HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_SYM_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) - HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -HDassert(H5E_PLUGIN_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MAJOR, "Plugin for dynamically loaded library"))==NULL) +HDassert(H5E_FSPACE_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MAJOR, "Free Space Manager"))==NULL) HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_PLUGIN_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) +if((H5E_FSPACE_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -HDassert(H5E_VFL_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MAJOR, "Virtual File Layer"))==NULL) +HDassert(H5E_SLIST_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MAJOR, "Skip Lists"))==NULL) HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_VFL_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) +if((H5E_SLIST_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -HDassert(H5E_INTERNAL_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MAJOR, "Internal error (too specific to document in detail)"))==NULL) +HDassert(H5E_NONE_MAJOR_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MAJOR, "No error"))==NULL) HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_INTERNAL_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) +if((H5E_NONE_MAJOR_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -HDassert(H5E_BTREE_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MAJOR, "B-Tree node"))==NULL) +HDassert(H5E_IO_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MAJOR, "Low-level I/O"))==NULL) HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_BTREE_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) +if((H5E_IO_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") HDassert(H5E_REFERENCE_g==(-1)); if((msg = H5E_create_msg(cls, H5E_MAJOR, "References"))==NULL) HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") if((H5E_REFERENCE_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -HDassert(H5E_DATASPACE_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MAJOR, "Dataspace"))==NULL) - HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_DATASPACE_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) - HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") HDassert(H5E_RESOURCE_g==(-1)); if((msg = H5E_create_msg(cls, H5E_MAJOR, "Resource unavailable"))==NULL) HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") if((H5E_RESOURCE_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -HDassert(H5E_PLIST_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MAJOR, "Property lists"))==NULL) - HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_PLIST_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) - HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -HDassert(H5E_LINK_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MAJOR, "Links"))==NULL) - HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_LINK_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) - HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -HDassert(H5E_DATATYPE_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MAJOR, "Datatype"))==NULL) - HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_DATATYPE_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) - HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -HDassert(H5E_RS_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MAJOR, "Reference Counted Strings"))==NULL) +HDassert(H5E_ARGS_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MAJOR, "Invalid arguments to routine"))==NULL) HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_RS_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) +if((H5E_ARGS_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -HDassert(H5E_HEAP_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MAJOR, "Heap"))==NULL) +HDassert(H5E_ATTR_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MAJOR, "Attribute"))==NULL) HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_HEAP_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) +if((H5E_ATTR_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") HDassert(H5E_OHDR_g==(-1)); if((msg = H5E_create_msg(cls, H5E_MAJOR, "Object header"))==NULL) HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") if((H5E_OHDR_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -HDassert(H5E_ATOM_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MAJOR, "Object atom"))==NULL) +HDassert(H5E_ERROR_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MAJOR, "Error API"))==NULL) HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_ATOM_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) +if((H5E_ERROR_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -HDassert(H5E_ATTR_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MAJOR, "Attribute"))==NULL) +HDassert(H5E_PLINE_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MAJOR, "Data filters"))==NULL) HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_ATTR_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) +if((H5E_PLINE_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -HDassert(H5E_NONE_MAJOR_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MAJOR, "No error"))==NULL) +HDassert(H5E_TST_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MAJOR, "Ternary Search Trees"))==NULL) HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_NONE_MAJOR_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) +if((H5E_TST_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -HDassert(H5E_IO_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MAJOR, "Low-level I/O"))==NULL) +HDassert(H5E_DATATYPE_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MAJOR, "Datatype"))==NULL) HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_IO_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) +if((H5E_DATATYPE_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -HDassert(H5E_SLIST_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MAJOR, "Skip Lists"))==NULL) +HDassert(H5E_LINK_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MAJOR, "Links"))==NULL) HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_SLIST_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) +if((H5E_LINK_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) + HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") +HDassert(H5E_SYM_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MAJOR, "Symbol table"))==NULL) + HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") +if((H5E_SYM_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") HDassert(H5E_EFL_g==(-1)); if((msg = H5E_create_msg(cls, H5E_MAJOR, "External file list"))==NULL) HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") if((H5E_EFL_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -HDassert(H5E_TST_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MAJOR, "Ternary Search Trees"))==NULL) +HDassert(H5E_PLIST_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MAJOR, "Property lists"))==NULL) HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_TST_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) +if((H5E_PLIST_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -HDassert(H5E_ARGS_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MAJOR, "Invalid arguments to routine"))==NULL) +HDassert(H5E_PLUGIN_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MAJOR, "Plugin for dynamically loaded library"))==NULL) HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_ARGS_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) +if((H5E_PLUGIN_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -HDassert(H5E_ERROR_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MAJOR, "Error API"))==NULL) +HDassert(H5E_FILE_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MAJOR, "File accessibilty"))==NULL) HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_ERROR_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) +if((H5E_FILE_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -HDassert(H5E_PLINE_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MAJOR, "Data filters"))==NULL) +HDassert(H5E_SOHM_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MAJOR, "Shared Object Header Messages"))==NULL) HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_PLINE_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) +if((H5E_SOHM_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -HDassert(H5E_FSPACE_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MAJOR, "Free Space Manager"))==NULL) +HDassert(H5E_VFL_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MAJOR, "Virtual File Layer"))==NULL) HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_FSPACE_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) +if((H5E_VFL_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") HDassert(H5E_CACHE_g==(-1)); if((msg = H5E_create_msg(cls, H5E_MAJOR, "Object cache"))==NULL) HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") if((H5E_CACHE_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") - -/*********************/ -/* Minor error codes */ -/*********************/ - - -/* Generic low-level file I/O errors */ -HDassert(H5E_SEEKERROR_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MINOR, "Seek failed"))==NULL) +HDassert(H5E_STORAGE_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MAJOR, "Data storage"))==NULL) HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_SEEKERROR_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) +if((H5E_STORAGE_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -HDassert(H5E_READERROR_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MINOR, "Read failed"))==NULL) +HDassert(H5E_HEAP_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MAJOR, "Heap"))==NULL) HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_READERROR_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) +if((H5E_HEAP_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -HDassert(H5E_WRITEERROR_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MINOR, "Write failed"))==NULL) +HDassert(H5E_RS_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MAJOR, "Reference Counted Strings"))==NULL) HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_WRITEERROR_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) +if((H5E_RS_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -HDassert(H5E_CLOSEERROR_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MINOR, "Close failed"))==NULL) +HDassert(H5E_FUNC_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MAJOR, "Function entry/exit"))==NULL) HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_CLOSEERROR_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) +if((H5E_FUNC_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -HDassert(H5E_OVERFLOW_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MINOR, "Address overflowed"))==NULL) +HDassert(H5E_ATOM_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MAJOR, "Object atom"))==NULL) HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_OVERFLOW_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) +if((H5E_ATOM_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -HDassert(H5E_FCNTL_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MINOR, "File control (fcntl) failed"))==NULL) +HDassert(H5E_DATASET_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MAJOR, "Dataset"))==NULL) HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_FCNTL_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) +if((H5E_DATASET_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) + HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") +HDassert(H5E_INTERNAL_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MAJOR, "Internal error (too specific to document in detail)"))==NULL) + HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") +if((H5E_INTERNAL_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) + HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") +HDassert(H5E_DATASPACE_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MAJOR, "Dataspace"))==NULL) + HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") +if((H5E_DATASPACE_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) + HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") +HDassert(H5E_BTREE_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MAJOR, "B-Tree node"))==NULL) + HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") +if((H5E_BTREE_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") +/*********************/ +/* Minor error codes */ +/*********************/ + + /* Resource errors */ HDassert(H5E_NOSPACE_g==(-1)); if((msg = H5E_create_msg(cls, H5E_MINOR, "No space available for allocation"))==NULL) @@ -267,55 +235,6 @@ if((msg = H5E_create_msg(cls, H5E_MINOR, "Object is already open"))==NULL) if((H5E_OBJOPEN_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -/* Heap errors */ -HDassert(H5E_CANTRESTORE_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MINOR, "Can't restore condition"))==NULL) - HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_CANTRESTORE_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) - HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -HDassert(H5E_CANTCOMPUTE_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MINOR, "Can't compute value"))==NULL) - HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_CANTCOMPUTE_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) - HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -HDassert(H5E_CANTEXTEND_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MINOR, "Can't extend heap's space"))==NULL) - HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_CANTEXTEND_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) - HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -HDassert(H5E_CANTATTACH_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MINOR, "Can't attach object"))==NULL) - HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_CANTATTACH_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) - HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -HDassert(H5E_CANTUPDATE_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MINOR, "Can't update object"))==NULL) - HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_CANTUPDATE_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) - HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -HDassert(H5E_CANTOPERATE_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MINOR, "Can't operate on object"))==NULL) - HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_CANTOPERATE_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) - HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") - -/* Function entry/exit interface errors */ -HDassert(H5E_CANTINIT_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MINOR, "Unable to initialize object"))==NULL) - HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_CANTINIT_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) - HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -HDassert(H5E_ALREADYINIT_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MINOR, "Object already initialized"))==NULL) - HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_ALREADYINIT_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) - HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -HDassert(H5E_CANTRELEASE_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MINOR, "Unable to release object"))==NULL) - HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_CANTRELEASE_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) - HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") - /* Property list errors */ HDassert(H5E_CANTGET_g==(-1)); if((msg = H5E_create_msg(cls, H5E_MINOR, "Can't get value"))==NULL) @@ -338,23 +257,6 @@ if((msg = H5E_create_msg(cls, H5E_MINOR, "Disallowed operation"))==NULL) if((H5E_SETDISALLOWED_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -/* Free space errors */ -HDassert(H5E_CANTMERGE_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MINOR, "Can't merge objects"))==NULL) - HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_CANTMERGE_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) - HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -HDassert(H5E_CANTREVIVE_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MINOR, "Can't revive object"))==NULL) - HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_CANTREVIVE_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) - HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -HDassert(H5E_CANTSHRINK_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MINOR, "Can't shrink container"))==NULL) - HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_CANTSHRINK_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) - HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") - /* Object header related errors */ HDassert(H5E_LINKCOUNT_g==(-1)); if((msg = H5E_create_msg(cls, H5E_MINOR, "Bad object header link count"))==NULL) @@ -402,67 +304,6 @@ if((msg = H5E_create_msg(cls, H5E_MINOR, "Unable to rename object"))==NULL) if((H5E_CANTRENAME_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -/* System level errors */ -HDassert(H5E_SYSERRSTR_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MINOR, "System error message"))==NULL) - HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_SYSERRSTR_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) - HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") - -/* I/O pipeline errors */ -HDassert(H5E_NOFILTER_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MINOR, "Requested filter is not available"))==NULL) - HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_NOFILTER_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) - HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -HDassert(H5E_CALLBACK_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MINOR, "Callback failed"))==NULL) - HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_CALLBACK_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) - HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -HDassert(H5E_CANAPPLY_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MINOR, "Error from filter 'can apply' callback"))==NULL) - HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_CANAPPLY_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) - HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -HDassert(H5E_SETLOCAL_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MINOR, "Error from filter 'set local' callback"))==NULL) - HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_SETLOCAL_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) - HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -HDassert(H5E_NOENCODER_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MINOR, "Filter present but encoding disabled"))==NULL) - HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_NOENCODER_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) - HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -HDassert(H5E_CANTFILTER_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MINOR, "Filter operation failed"))==NULL) - HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_CANTFILTER_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) - HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") - -/* Group related errors */ -HDassert(H5E_CANTOPENOBJ_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MINOR, "Can't open object"))==NULL) - HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_CANTOPENOBJ_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) - HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -HDassert(H5E_CANTCLOSEOBJ_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MINOR, "Can't close object"))==NULL) - HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_CANTCLOSEOBJ_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) - HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -HDassert(H5E_COMPLEN_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MINOR, "Name component is too long"))==NULL) - HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_COMPLEN_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) - HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -HDassert(H5E_PATH_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MINOR, "Problem with path to object"))==NULL) - HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_PATH_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) - HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") - /* No error */ HDassert(H5E_NONE_MINOR_g==(-1)); if((msg = H5E_create_msg(cls, H5E_MINOR, "No error"))==NULL) @@ -470,13 +311,6 @@ if((msg = H5E_create_msg(cls, H5E_MINOR, "No error"))==NULL) if((H5E_NONE_MINOR_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -/* Plugin errors */ -HDassert(H5E_OPENERROR_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MINOR, "Can't open directory or file"))==NULL) - HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_OPENERROR_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) - HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") - /* File accessibilty errors */ HDassert(H5E_FILEEXISTS_g==(-1)); if((msg = H5E_create_msg(cls, H5E_MINOR, "File already exists"))==NULL) @@ -556,6 +390,62 @@ if((msg = H5E_create_msg(cls, H5E_MINOR, "Out of IDs for group"))==NULL) if((H5E_NOIDS_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") +/* Plugin errors */ +HDassert(H5E_OPENERROR_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MINOR, "Can't open directory or file"))==NULL) + HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") +if((H5E_OPENERROR_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) + HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") + +/* Dataspace errors */ +HDassert(H5E_CANTCLIP_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MINOR, "Can't clip hyperslab region"))==NULL) + HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") +if((H5E_CANTCLIP_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) + HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") +HDassert(H5E_CANTCOUNT_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MINOR, "Can't count elements"))==NULL) + HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") +if((H5E_CANTCOUNT_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) + HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") +HDassert(H5E_CANTSELECT_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MINOR, "Can't select hyperslab"))==NULL) + HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") +if((H5E_CANTSELECT_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) + HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") +HDassert(H5E_CANTNEXT_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MINOR, "Can't move to next iterator location"))==NULL) + HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") +if((H5E_CANTNEXT_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) + HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") +HDassert(H5E_BADSELECT_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MINOR, "Invalid selection"))==NULL) + HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") +if((H5E_BADSELECT_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) + HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") +HDassert(H5E_CANTCOMPARE_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MINOR, "Can't compare objects"))==NULL) + HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") +if((H5E_CANTCOMPARE_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) + HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") + +/* Parallel MPI errors */ +HDassert(H5E_MPI_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MINOR, "Some MPI function failed"))==NULL) + HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") +if((H5E_MPI_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) + HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") +HDassert(H5E_MPIERRSTR_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MINOR, "MPI Error String"))==NULL) + HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") +if((H5E_MPIERRSTR_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) + HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") +HDassert(H5E_CANTRECV_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MINOR, "Can't receive data"))==NULL) + HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") +if((H5E_CANTRECV_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) + HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") + /* Cache related errors */ HDassert(H5E_CANTFLUSH_g==(-1)); if((msg = H5E_create_msg(cls, H5E_MINOR, "Unable to flush data from cache"))==NULL) @@ -633,6 +523,38 @@ if((msg = H5E_create_msg(cls, H5E_MINOR, "Unable to resize a metadata cache entr if((H5E_CANTRESIZE_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") +/* Heap errors */ +HDassert(H5E_CANTRESTORE_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MINOR, "Can't restore condition"))==NULL) + HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") +if((H5E_CANTRESTORE_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) + HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") +HDassert(H5E_CANTCOMPUTE_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MINOR, "Can't compute value"))==NULL) + HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") +if((H5E_CANTCOMPUTE_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) + HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") +HDassert(H5E_CANTEXTEND_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MINOR, "Can't extend heap's space"))==NULL) + HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") +if((H5E_CANTEXTEND_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) + HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") +HDassert(H5E_CANTATTACH_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MINOR, "Can't attach object"))==NULL) + HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") +if((H5E_CANTATTACH_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) + HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") +HDassert(H5E_CANTUPDATE_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MINOR, "Can't update object"))==NULL) + HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") +if((H5E_CANTUPDATE_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) + HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") +HDassert(H5E_CANTOPERATE_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MINOR, "Can't operate on object"))==NULL) + HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") +if((H5E_CANTOPERATE_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) + HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") + /* Link related errors */ HDassert(H5E_TRAVERSE_g==(-1)); if((msg = H5E_create_msg(cls, H5E_MINOR, "Link traversal failure"))==NULL) @@ -660,82 +582,6 @@ if((msg = H5E_create_msg(cls, H5E_MINOR, "Can't sort objects"))==NULL) if((H5E_CANTSORT_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -/* Parallel MPI errors */ -HDassert(H5E_MPI_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MINOR, "Some MPI function failed"))==NULL) - HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_MPI_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) - HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -HDassert(H5E_MPIERRSTR_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MINOR, "MPI Error String"))==NULL) - HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_MPIERRSTR_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) - HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -HDassert(H5E_CANTRECV_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MINOR, "Can't receive data"))==NULL) - HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_CANTRECV_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) - HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") - -/* Dataspace errors */ -HDassert(H5E_CANTCLIP_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MINOR, "Can't clip hyperslab region"))==NULL) - HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_CANTCLIP_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) - HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -HDassert(H5E_CANTCOUNT_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MINOR, "Can't count elements"))==NULL) - HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_CANTCOUNT_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) - HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -HDassert(H5E_CANTSELECT_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MINOR, "Can't select hyperslab"))==NULL) - HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_CANTSELECT_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) - HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -HDassert(H5E_CANTNEXT_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MINOR, "Can't move to next iterator location"))==NULL) - HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_CANTNEXT_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) - HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -HDassert(H5E_BADSELECT_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MINOR, "Invalid selection"))==NULL) - HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_BADSELECT_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) - HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -HDassert(H5E_CANTCOMPARE_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MINOR, "Can't compare objects"))==NULL) - HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_CANTCOMPARE_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) - HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") - -/* Argument errors */ -HDassert(H5E_UNINITIALIZED_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MINOR, "Information is uinitialized"))==NULL) - HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_UNINITIALIZED_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) - HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -HDassert(H5E_UNSUPPORTED_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MINOR, "Feature is unsupported"))==NULL) - HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_UNSUPPORTED_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) - HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -HDassert(H5E_BADTYPE_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MINOR, "Inappropriate type"))==NULL) - HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_BADTYPE_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) - HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -HDassert(H5E_BADRANGE_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MINOR, "Out of range"))==NULL) - HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_BADRANGE_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) - HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") -HDassert(H5E_BADVALUE_g==(-1)); -if((msg = H5E_create_msg(cls, H5E_MINOR, "Bad value"))==NULL) - HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") -if((H5E_BADVALUE_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) - HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") - /* B-tree related errors */ HDassert(H5E_NOTFOUND_g==(-1)); if((msg = H5E_create_msg(cls, H5E_MINOR, "Object not found"))==NULL) @@ -793,6 +639,133 @@ if((msg = H5E_create_msg(cls, H5E_MINOR, "Unable to remove object"))==NULL) if((H5E_CANTREMOVE_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") +/* I/O pipeline errors */ +HDassert(H5E_NOFILTER_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MINOR, "Requested filter is not available"))==NULL) + HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") +if((H5E_NOFILTER_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) + HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") +HDassert(H5E_CALLBACK_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MINOR, "Callback failed"))==NULL) + HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") +if((H5E_CALLBACK_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) + HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") +HDassert(H5E_CANAPPLY_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MINOR, "Error from filter 'can apply' callback"))==NULL) + HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") +if((H5E_CANAPPLY_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) + HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") +HDassert(H5E_SETLOCAL_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MINOR, "Error from filter 'set local' callback"))==NULL) + HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") +if((H5E_SETLOCAL_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) + HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") +HDassert(H5E_NOENCODER_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MINOR, "Filter present but encoding disabled"))==NULL) + HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") +if((H5E_NOENCODER_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) + HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") +HDassert(H5E_CANTFILTER_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MINOR, "Filter operation failed"))==NULL) + HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") +if((H5E_CANTFILTER_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) + HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") + +/* Function entry/exit interface errors */ +HDassert(H5E_CANTINIT_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MINOR, "Unable to initialize object"))==NULL) + HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") +if((H5E_CANTINIT_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) + HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") +HDassert(H5E_ALREADYINIT_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MINOR, "Object already initialized"))==NULL) + HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") +if((H5E_ALREADYINIT_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) + HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") +HDassert(H5E_CANTRELEASE_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MINOR, "Unable to release object"))==NULL) + HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") +if((H5E_CANTRELEASE_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) + HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") + +/* Group related errors */ +HDassert(H5E_CANTOPENOBJ_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MINOR, "Can't open object"))==NULL) + HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") +if((H5E_CANTOPENOBJ_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) + HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") +HDassert(H5E_CANTCLOSEOBJ_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MINOR, "Can't close object"))==NULL) + HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") +if((H5E_CANTCLOSEOBJ_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) + HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") +HDassert(H5E_COMPLEN_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MINOR, "Name component is too long"))==NULL) + HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") +if((H5E_COMPLEN_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) + HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") +HDassert(H5E_PATH_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MINOR, "Problem with path to object"))==NULL) + HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") +if((H5E_PATH_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) + HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") + +/* Generic low-level file I/O errors */ +HDassert(H5E_SEEKERROR_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MINOR, "Seek failed"))==NULL) + HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") +if((H5E_SEEKERROR_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) + HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") +HDassert(H5E_READERROR_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MINOR, "Read failed"))==NULL) + HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") +if((H5E_READERROR_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) + HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") +HDassert(H5E_WRITEERROR_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MINOR, "Write failed"))==NULL) + HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") +if((H5E_WRITEERROR_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) + HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") +HDassert(H5E_CLOSEERROR_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MINOR, "Close failed"))==NULL) + HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") +if((H5E_CLOSEERROR_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) + HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") +HDassert(H5E_OVERFLOW_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MINOR, "Address overflowed"))==NULL) + HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") +if((H5E_OVERFLOW_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) + HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") +HDassert(H5E_FCNTL_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MINOR, "File control (fcntl) failed"))==NULL) + HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") +if((H5E_FCNTL_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) + HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") + +/* Free space errors */ +HDassert(H5E_CANTMERGE_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MINOR, "Can't merge objects"))==NULL) + HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") +if((H5E_CANTMERGE_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) + HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") +HDassert(H5E_CANTREVIVE_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MINOR, "Can't revive object"))==NULL) + HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") +if((H5E_CANTREVIVE_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) + HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") +HDassert(H5E_CANTSHRINK_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MINOR, "Can't shrink container"))==NULL) + HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") +if((H5E_CANTSHRINK_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) + HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") + +/* System level errors */ +HDassert(H5E_SYSERRSTR_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MINOR, "System error message"))==NULL) + HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") +if((H5E_SYSERRSTR_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) + HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") + /* Datatype conversion errors */ HDassert(H5E_CANTCONVERT_g==(-1)); if((msg = H5E_create_msg(cls, H5E_MINOR, "Can't convert datatypes"))==NULL) @@ -805,4 +778,31 @@ if((msg = H5E_create_msg(cls, H5E_MINOR, "Bad size for object"))==NULL) if((H5E_BADSIZE_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") +/* Argument errors */ +HDassert(H5E_UNINITIALIZED_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MINOR, "Information is uinitialized"))==NULL) + HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") +if((H5E_UNINITIALIZED_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) + HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") +HDassert(H5E_UNSUPPORTED_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MINOR, "Feature is unsupported"))==NULL) + HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") +if((H5E_UNSUPPORTED_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) + HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") +HDassert(H5E_BADTYPE_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MINOR, "Inappropriate type"))==NULL) + HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") +if((H5E_BADTYPE_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) + HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") +HDassert(H5E_BADRANGE_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MINOR, "Out of range"))==NULL) + HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") +if((H5E_BADRANGE_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) + HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") +HDassert(H5E_BADVALUE_g==(-1)); +if((msg = H5E_create_msg(cls, H5E_MINOR, "Bad value"))==NULL) + HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, "error message initialization failed") +if((H5E_BADVALUE_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0) + HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, "can't register error message") + #endif /* H5Einit_H */ diff --git a/src/H5Epubgen.h b/src/H5Epubgen.h index 0a72245..f96f107 100644 --- a/src/H5Epubgen.h +++ b/src/H5Epubgen.h @@ -26,87 +26,73 @@ extern "C" { /* Major error codes */ /*********************/ -#define H5E_DATASET (H5OPEN H5E_DATASET_g) -#define H5E_FUNC (H5OPEN H5E_FUNC_g) -#define H5E_STORAGE (H5OPEN H5E_STORAGE_g) -#define H5E_FILE (H5OPEN H5E_FILE_g) -#define H5E_SOHM (H5OPEN H5E_SOHM_g) -#define H5E_SYM (H5OPEN H5E_SYM_g) -#define H5E_PLUGIN (H5OPEN H5E_PLUGIN_g) -#define H5E_VFL (H5OPEN H5E_VFL_g) -#define H5E_INTERNAL (H5OPEN H5E_INTERNAL_g) -#define H5E_BTREE (H5OPEN H5E_BTREE_g) -#define H5E_REFERENCE (H5OPEN H5E_REFERENCE_g) -#define H5E_DATASPACE (H5OPEN H5E_DATASPACE_g) -#define H5E_RESOURCE (H5OPEN H5E_RESOURCE_g) -#define H5E_PLIST (H5OPEN H5E_PLIST_g) -#define H5E_LINK (H5OPEN H5E_LINK_g) -#define H5E_DATATYPE (H5OPEN H5E_DATATYPE_g) -#define H5E_RS (H5OPEN H5E_RS_g) -#define H5E_HEAP (H5OPEN H5E_HEAP_g) -#define H5E_OHDR (H5OPEN H5E_OHDR_g) -#define H5E_ATOM (H5OPEN H5E_ATOM_g) -#define H5E_ATTR (H5OPEN H5E_ATTR_g) +#define H5E_FSPACE (H5OPEN H5E_FSPACE_g) +#define H5E_SLIST (H5OPEN H5E_SLIST_g) #define H5E_NONE_MAJOR (H5OPEN H5E_NONE_MAJOR_g) #define H5E_IO (H5OPEN H5E_IO_g) -#define H5E_SLIST (H5OPEN H5E_SLIST_g) -#define H5E_EFL (H5OPEN H5E_EFL_g) -#define H5E_TST (H5OPEN H5E_TST_g) +#define H5E_REFERENCE (H5OPEN H5E_REFERENCE_g) +#define H5E_RESOURCE (H5OPEN H5E_RESOURCE_g) #define H5E_ARGS (H5OPEN H5E_ARGS_g) +#define H5E_ATTR (H5OPEN H5E_ATTR_g) +#define H5E_OHDR (H5OPEN H5E_OHDR_g) #define H5E_ERROR (H5OPEN H5E_ERROR_g) #define H5E_PLINE (H5OPEN H5E_PLINE_g) -#define H5E_FSPACE (H5OPEN H5E_FSPACE_g) +#define H5E_TST (H5OPEN H5E_TST_g) +#define H5E_DATATYPE (H5OPEN H5E_DATATYPE_g) +#define H5E_LINK (H5OPEN H5E_LINK_g) +#define H5E_SYM (H5OPEN H5E_SYM_g) +#define H5E_EFL (H5OPEN H5E_EFL_g) +#define H5E_PLIST (H5OPEN H5E_PLIST_g) +#define H5E_PLUGIN (H5OPEN H5E_PLUGIN_g) +#define H5E_FILE (H5OPEN H5E_FILE_g) +#define H5E_SOHM (H5OPEN H5E_SOHM_g) +#define H5E_VFL (H5OPEN H5E_VFL_g) #define H5E_CACHE (H5OPEN H5E_CACHE_g) -H5_DLLVAR hid_t H5E_DATASET_g; /* Dataset */ -H5_DLLVAR hid_t H5E_FUNC_g; /* Function entry/exit */ -H5_DLLVAR hid_t H5E_STORAGE_g; /* Data storage */ -H5_DLLVAR hid_t H5E_FILE_g; /* File accessibilty */ -H5_DLLVAR hid_t H5E_SOHM_g; /* Shared Object Header Messages */ -H5_DLLVAR hid_t H5E_SYM_g; /* Symbol table */ -H5_DLLVAR hid_t H5E_PLUGIN_g; /* Plugin for dynamically loaded library */ -H5_DLLVAR hid_t H5E_VFL_g; /* Virtual File Layer */ -H5_DLLVAR hid_t H5E_INTERNAL_g; /* Internal error (too specific to document in detail) */ -H5_DLLVAR hid_t H5E_BTREE_g; /* B-Tree node */ -H5_DLLVAR hid_t H5E_REFERENCE_g; /* References */ -H5_DLLVAR hid_t H5E_DATASPACE_g; /* Dataspace */ -H5_DLLVAR hid_t H5E_RESOURCE_g; /* Resource unavailable */ -H5_DLLVAR hid_t H5E_PLIST_g; /* Property lists */ -H5_DLLVAR hid_t H5E_LINK_g; /* Links */ -H5_DLLVAR hid_t H5E_DATATYPE_g; /* Datatype */ -H5_DLLVAR hid_t H5E_RS_g; /* Reference Counted Strings */ -H5_DLLVAR hid_t H5E_HEAP_g; /* Heap */ -H5_DLLVAR hid_t H5E_OHDR_g; /* Object header */ -H5_DLLVAR hid_t H5E_ATOM_g; /* Object atom */ -H5_DLLVAR hid_t H5E_ATTR_g; /* Attribute */ +#define H5E_STORAGE (H5OPEN H5E_STORAGE_g) +#define H5E_HEAP (H5OPEN H5E_HEAP_g) +#define H5E_RS (H5OPEN H5E_RS_g) +#define H5E_FUNC (H5OPEN H5E_FUNC_g) +#define H5E_ATOM (H5OPEN H5E_ATOM_g) +#define H5E_DATASET (H5OPEN H5E_DATASET_g) +#define H5E_INTERNAL (H5OPEN H5E_INTERNAL_g) +#define H5E_DATASPACE (H5OPEN H5E_DATASPACE_g) +#define H5E_BTREE (H5OPEN H5E_BTREE_g) +H5_DLLVAR hid_t H5E_FSPACE_g; /* Free Space Manager */ +H5_DLLVAR hid_t H5E_SLIST_g; /* Skip Lists */ H5_DLLVAR hid_t H5E_NONE_MAJOR_g; /* No error */ H5_DLLVAR hid_t H5E_IO_g; /* Low-level I/O */ -H5_DLLVAR hid_t H5E_SLIST_g; /* Skip Lists */ -H5_DLLVAR hid_t H5E_EFL_g; /* External file list */ -H5_DLLVAR hid_t H5E_TST_g; /* Ternary Search Trees */ +H5_DLLVAR hid_t H5E_REFERENCE_g; /* References */ +H5_DLLVAR hid_t H5E_RESOURCE_g; /* Resource unavailable */ H5_DLLVAR hid_t H5E_ARGS_g; /* Invalid arguments to routine */ +H5_DLLVAR hid_t H5E_ATTR_g; /* Attribute */ +H5_DLLVAR hid_t H5E_OHDR_g; /* Object header */ H5_DLLVAR hid_t H5E_ERROR_g; /* Error API */ H5_DLLVAR hid_t H5E_PLINE_g; /* Data filters */ -H5_DLLVAR hid_t H5E_FSPACE_g; /* Free Space Manager */ +H5_DLLVAR hid_t H5E_TST_g; /* Ternary Search Trees */ +H5_DLLVAR hid_t H5E_DATATYPE_g; /* Datatype */ +H5_DLLVAR hid_t H5E_LINK_g; /* Links */ +H5_DLLVAR hid_t H5E_SYM_g; /* Symbol table */ +H5_DLLVAR hid_t H5E_EFL_g; /* External file list */ +H5_DLLVAR hid_t H5E_PLIST_g; /* Property lists */ +H5_DLLVAR hid_t H5E_PLUGIN_g; /* Plugin for dynamically loaded library */ +H5_DLLVAR hid_t H5E_FILE_g; /* File accessibilty */ +H5_DLLVAR hid_t H5E_SOHM_g; /* Shared Object Header Messages */ +H5_DLLVAR hid_t H5E_VFL_g; /* Virtual File Layer */ H5_DLLVAR hid_t H5E_CACHE_g; /* Object cache */ +H5_DLLVAR hid_t H5E_STORAGE_g; /* Data storage */ +H5_DLLVAR hid_t H5E_HEAP_g; /* Heap */ +H5_DLLVAR hid_t H5E_RS_g; /* Reference Counted Strings */ +H5_DLLVAR hid_t H5E_FUNC_g; /* Function entry/exit */ +H5_DLLVAR hid_t H5E_ATOM_g; /* Object atom */ +H5_DLLVAR hid_t H5E_DATASET_g; /* Dataset */ +H5_DLLVAR hid_t H5E_INTERNAL_g; /* Internal error (too specific to document in detail) */ +H5_DLLVAR hid_t H5E_DATASPACE_g; /* Dataspace */ +H5_DLLVAR hid_t H5E_BTREE_g; /* B-Tree node */ /*********************/ /* Minor error codes */ /*********************/ -/* Generic low-level file I/O errors */ -#define H5E_SEEKERROR (H5OPEN H5E_SEEKERROR_g) -#define H5E_READERROR (H5OPEN H5E_READERROR_g) -#define H5E_WRITEERROR (H5OPEN H5E_WRITEERROR_g) -#define H5E_CLOSEERROR (H5OPEN H5E_CLOSEERROR_g) -#define H5E_OVERFLOW (H5OPEN H5E_OVERFLOW_g) -#define H5E_FCNTL (H5OPEN H5E_FCNTL_g) -H5_DLLVAR hid_t H5E_SEEKERROR_g; /* Seek failed */ -H5_DLLVAR hid_t H5E_READERROR_g; /* Read failed */ -H5_DLLVAR hid_t H5E_WRITEERROR_g; /* Write failed */ -H5_DLLVAR hid_t H5E_CLOSEERROR_g; /* Close failed */ -H5_DLLVAR hid_t H5E_OVERFLOW_g; /* Address overflowed */ -H5_DLLVAR hid_t H5E_FCNTL_g; /* File control (fcntl) failed */ - /* Resource errors */ #define H5E_NOSPACE (H5OPEN H5E_NOSPACE_g) #define H5E_CANTALLOC (H5OPEN H5E_CANTALLOC_g) @@ -129,28 +115,6 @@ H5_DLLVAR hid_t H5E_CANTGC_g; /* Unable to garbage collect */ H5_DLLVAR hid_t H5E_CANTGETSIZE_g; /* Unable to compute size */ H5_DLLVAR hid_t H5E_OBJOPEN_g; /* Object is already open */ -/* Heap errors */ -#define H5E_CANTRESTORE (H5OPEN H5E_CANTRESTORE_g) -#define H5E_CANTCOMPUTE (H5OPEN H5E_CANTCOMPUTE_g) -#define H5E_CANTEXTEND (H5OPEN H5E_CANTEXTEND_g) -#define H5E_CANTATTACH (H5OPEN H5E_CANTATTACH_g) -#define H5E_CANTUPDATE (H5OPEN H5E_CANTUPDATE_g) -#define H5E_CANTOPERATE (H5OPEN H5E_CANTOPERATE_g) -H5_DLLVAR hid_t H5E_CANTRESTORE_g; /* Can't restore condition */ -H5_DLLVAR hid_t H5E_CANTCOMPUTE_g; /* Can't compute value */ -H5_DLLVAR hid_t H5E_CANTEXTEND_g; /* Can't extend heap's space */ -H5_DLLVAR hid_t H5E_CANTATTACH_g; /* Can't attach object */ -H5_DLLVAR hid_t H5E_CANTUPDATE_g; /* Can't update object */ -H5_DLLVAR hid_t H5E_CANTOPERATE_g; /* Can't operate on object */ - -/* Function entry/exit interface errors */ -#define H5E_CANTINIT (H5OPEN H5E_CANTINIT_g) -#define H5E_ALREADYINIT (H5OPEN H5E_ALREADYINIT_g) -#define H5E_CANTRELEASE (H5OPEN H5E_CANTRELEASE_g) -H5_DLLVAR hid_t H5E_CANTINIT_g; /* Unable to initialize object */ -H5_DLLVAR hid_t H5E_ALREADYINIT_g; /* Object already initialized */ -H5_DLLVAR hid_t H5E_CANTRELEASE_g; /* Unable to release object */ - /* Property list errors */ #define H5E_CANTGET (H5OPEN H5E_CANTGET_g) #define H5E_CANTSET (H5OPEN H5E_CANTSET_g) @@ -161,14 +125,6 @@ H5_DLLVAR hid_t H5E_CANTSET_g; /* Can't set value */ H5_DLLVAR hid_t H5E_DUPCLASS_g; /* Duplicate class name in parent class */ H5_DLLVAR hid_t H5E_SETDISALLOWED_g; /* Disallowed operation */ -/* Free space errors */ -#define H5E_CANTMERGE (H5OPEN H5E_CANTMERGE_g) -#define H5E_CANTREVIVE (H5OPEN H5E_CANTREVIVE_g) -#define H5E_CANTSHRINK (H5OPEN H5E_CANTSHRINK_g) -H5_DLLVAR hid_t H5E_CANTMERGE_g; /* Can't merge objects */ -H5_DLLVAR hid_t H5E_CANTREVIVE_g; /* Can't revive object */ -H5_DLLVAR hid_t H5E_CANTSHRINK_g; /* Can't shrink container */ - /* Object header related errors */ #define H5E_LINKCOUNT (H5OPEN H5E_LINKCOUNT_g) #define H5E_VERSION (H5OPEN H5E_VERSION_g) @@ -189,42 +145,10 @@ H5_DLLVAR hid_t H5E_CANTPACK_g; /* Can't pack messages */ H5_DLLVAR hid_t H5E_CANTRESET_g; /* Can't reset object */ H5_DLLVAR hid_t H5E_CANTRENAME_g; /* Unable to rename object */ -/* System level errors */ -#define H5E_SYSERRSTR (H5OPEN H5E_SYSERRSTR_g) -H5_DLLVAR hid_t H5E_SYSERRSTR_g; /* System error message */ - -/* I/O pipeline errors */ -#define H5E_NOFILTER (H5OPEN H5E_NOFILTER_g) -#define H5E_CALLBACK (H5OPEN H5E_CALLBACK_g) -#define H5E_CANAPPLY (H5OPEN H5E_CANAPPLY_g) -#define H5E_SETLOCAL (H5OPEN H5E_SETLOCAL_g) -#define H5E_NOENCODER (H5OPEN H5E_NOENCODER_g) -#define H5E_CANTFILTER (H5OPEN H5E_CANTFILTER_g) -H5_DLLVAR hid_t H5E_NOFILTER_g; /* Requested filter is not available */ -H5_DLLVAR hid_t H5E_CALLBACK_g; /* Callback failed */ -H5_DLLVAR hid_t H5E_CANAPPLY_g; /* Error from filter 'can apply' callback */ -H5_DLLVAR hid_t H5E_SETLOCAL_g; /* Error from filter 'set local' callback */ -H5_DLLVAR hid_t H5E_NOENCODER_g; /* Filter present but encoding disabled */ -H5_DLLVAR hid_t H5E_CANTFILTER_g; /* Filter operation failed */ - -/* Group related errors */ -#define H5E_CANTOPENOBJ (H5OPEN H5E_CANTOPENOBJ_g) -#define H5E_CANTCLOSEOBJ (H5OPEN H5E_CANTCLOSEOBJ_g) -#define H5E_COMPLEN (H5OPEN H5E_COMPLEN_g) -#define H5E_PATH (H5OPEN H5E_PATH_g) -H5_DLLVAR hid_t H5E_CANTOPENOBJ_g; /* Can't open object */ -H5_DLLVAR hid_t H5E_CANTCLOSEOBJ_g; /* Can't close object */ -H5_DLLVAR hid_t H5E_COMPLEN_g; /* Name component is too long */ -H5_DLLVAR hid_t H5E_PATH_g; /* Problem with path to object */ - /* No error */ #define H5E_NONE_MINOR (H5OPEN H5E_NONE_MINOR_g) H5_DLLVAR hid_t H5E_NONE_MINOR_g; /* No error */ -/* Plugin errors */ -#define H5E_OPENERROR (H5OPEN H5E_OPENERROR_g) -H5_DLLVAR hid_t H5E_OPENERROR_g; /* Can't open directory or file */ - /* File accessibilty errors */ #define H5E_FILEEXISTS (H5OPEN H5E_FILEEXISTS_g) #define H5E_FILEOPEN (H5OPEN H5E_FILEOPEN_g) @@ -259,6 +183,32 @@ H5_DLLVAR hid_t H5E_CANTINC_g; /* Unable to increment reference count */ H5_DLLVAR hid_t H5E_CANTDEC_g; /* Unable to decrement reference count */ H5_DLLVAR hid_t H5E_NOIDS_g; /* Out of IDs for group */ +/* Plugin errors */ +#define H5E_OPENERROR (H5OPEN H5E_OPENERROR_g) +H5_DLLVAR hid_t H5E_OPENERROR_g; /* Can't open directory or file */ + +/* Dataspace errors */ +#define H5E_CANTCLIP (H5OPEN H5E_CANTCLIP_g) +#define H5E_CANTCOUNT (H5OPEN H5E_CANTCOUNT_g) +#define H5E_CANTSELECT (H5OPEN H5E_CANTSELECT_g) +#define H5E_CANTNEXT (H5OPEN H5E_CANTNEXT_g) +#define H5E_BADSELECT (H5OPEN H5E_BADSELECT_g) +#define H5E_CANTCOMPARE (H5OPEN H5E_CANTCOMPARE_g) +H5_DLLVAR hid_t H5E_CANTCLIP_g; /* Can't clip hyperslab region */ +H5_DLLVAR hid_t H5E_CANTCOUNT_g; /* Can't count elements */ +H5_DLLVAR hid_t H5E_CANTSELECT_g; /* Can't select hyperslab */ +H5_DLLVAR hid_t H5E_CANTNEXT_g; /* Can't move to next iterator location */ +H5_DLLVAR hid_t H5E_BADSELECT_g; /* Invalid selection */ +H5_DLLVAR hid_t H5E_CANTCOMPARE_g; /* Can't compare objects */ + +/* Parallel MPI errors */ +#define H5E_MPI (H5OPEN H5E_MPI_g) +#define H5E_MPIERRSTR (H5OPEN H5E_MPIERRSTR_g) +#define H5E_CANTRECV (H5OPEN H5E_CANTRECV_g) +H5_DLLVAR hid_t H5E_MPI_g; /* Some MPI function failed */ +H5_DLLVAR hid_t H5E_MPIERRSTR_g; /* MPI Error String */ +H5_DLLVAR hid_t H5E_CANTRECV_g; /* Can't receive data */ + /* Cache related errors */ #define H5E_CANTFLUSH (H5OPEN H5E_CANTFLUSH_g) #define H5E_CANTSERIALIZE (H5OPEN H5E_CANTSERIALIZE_g) @@ -291,6 +241,20 @@ H5_DLLVAR hid_t H5E_CANTDIRTY_g; /* Unable to mark metadata as dirty */ H5_DLLVAR hid_t H5E_CANTEXPUNGE_g; /* Unable to expunge a metadata cache entry */ H5_DLLVAR hid_t H5E_CANTRESIZE_g; /* Unable to resize a metadata cache entry */ +/* Heap errors */ +#define H5E_CANTRESTORE (H5OPEN H5E_CANTRESTORE_g) +#define H5E_CANTCOMPUTE (H5OPEN H5E_CANTCOMPUTE_g) +#define H5E_CANTEXTEND (H5OPEN H5E_CANTEXTEND_g) +#define H5E_CANTATTACH (H5OPEN H5E_CANTATTACH_g) +#define H5E_CANTUPDATE (H5OPEN H5E_CANTUPDATE_g) +#define H5E_CANTOPERATE (H5OPEN H5E_CANTOPERATE_g) +H5_DLLVAR hid_t H5E_CANTRESTORE_g; /* Can't restore condition */ +H5_DLLVAR hid_t H5E_CANTCOMPUTE_g; /* Can't compute value */ +H5_DLLVAR hid_t H5E_CANTEXTEND_g; /* Can't extend heap's space */ +H5_DLLVAR hid_t H5E_CANTATTACH_g; /* Can't attach object */ +H5_DLLVAR hid_t H5E_CANTUPDATE_g; /* Can't update object */ +H5_DLLVAR hid_t H5E_CANTOPERATE_g; /* Can't operate on object */ + /* Link related errors */ #define H5E_TRAVERSE (H5OPEN H5E_TRAVERSE_g) #define H5E_NLINKS (H5OPEN H5E_NLINKS_g) @@ -303,40 +267,6 @@ H5_DLLVAR hid_t H5E_NOTREGISTERED_g; /* Link class not registered */ H5_DLLVAR hid_t H5E_CANTMOVE_g; /* Can't move object */ H5_DLLVAR hid_t H5E_CANTSORT_g; /* Can't sort objects */ -/* Parallel MPI errors */ -#define H5E_MPI (H5OPEN H5E_MPI_g) -#define H5E_MPIERRSTR (H5OPEN H5E_MPIERRSTR_g) -#define H5E_CANTRECV (H5OPEN H5E_CANTRECV_g) -H5_DLLVAR hid_t H5E_MPI_g; /* Some MPI function failed */ -H5_DLLVAR hid_t H5E_MPIERRSTR_g; /* MPI Error String */ -H5_DLLVAR hid_t H5E_CANTRECV_g; /* Can't receive data */ - -/* Dataspace errors */ -#define H5E_CANTCLIP (H5OPEN H5E_CANTCLIP_g) -#define H5E_CANTCOUNT (H5OPEN H5E_CANTCOUNT_g) -#define H5E_CANTSELECT (H5OPEN H5E_CANTSELECT_g) -#define H5E_CANTNEXT (H5OPEN H5E_CANTNEXT_g) -#define H5E_BADSELECT (H5OPEN H5E_BADSELECT_g) -#define H5E_CANTCOMPARE (H5OPEN H5E_CANTCOMPARE_g) -H5_DLLVAR hid_t H5E_CANTCLIP_g; /* Can't clip hyperslab region */ -H5_DLLVAR hid_t H5E_CANTCOUNT_g; /* Can't count elements */ -H5_DLLVAR hid_t H5E_CANTSELECT_g; /* Can't select hyperslab */ -H5_DLLVAR hid_t H5E_CANTNEXT_g; /* Can't move to next iterator location */ -H5_DLLVAR hid_t H5E_BADSELECT_g; /* Invalid selection */ -H5_DLLVAR hid_t H5E_CANTCOMPARE_g; /* Can't compare objects */ - -/* Argument errors */ -#define H5E_UNINITIALIZED (H5OPEN H5E_UNINITIALIZED_g) -#define H5E_UNSUPPORTED (H5OPEN H5E_UNSUPPORTED_g) -#define H5E_BADTYPE (H5OPEN H5E_BADTYPE_g) -#define H5E_BADRANGE (H5OPEN H5E_BADRANGE_g) -#define H5E_BADVALUE (H5OPEN H5E_BADVALUE_g) -H5_DLLVAR hid_t H5E_UNINITIALIZED_g; /* Information is uinitialized */ -H5_DLLVAR hid_t H5E_UNSUPPORTED_g; /* Feature is unsupported */ -H5_DLLVAR hid_t H5E_BADTYPE_g; /* Inappropriate type */ -H5_DLLVAR hid_t H5E_BADRANGE_g; /* Out of range */ -H5_DLLVAR hid_t H5E_BADVALUE_g; /* Bad value */ - /* B-tree related errors */ #define H5E_NOTFOUND (H5OPEN H5E_NOTFOUND_g) #define H5E_EXISTS (H5OPEN H5E_EXISTS_g) @@ -361,12 +291,82 @@ H5_DLLVAR hid_t H5E_CANTLIST_g; /* Unable to list node */ H5_DLLVAR hid_t H5E_CANTMODIFY_g; /* Unable to modify record */ H5_DLLVAR hid_t H5E_CANTREMOVE_g; /* Unable to remove object */ +/* I/O pipeline errors */ +#define H5E_NOFILTER (H5OPEN H5E_NOFILTER_g) +#define H5E_CALLBACK (H5OPEN H5E_CALLBACK_g) +#define H5E_CANAPPLY (H5OPEN H5E_CANAPPLY_g) +#define H5E_SETLOCAL (H5OPEN H5E_SETLOCAL_g) +#define H5E_NOENCODER (H5OPEN H5E_NOENCODER_g) +#define H5E_CANTFILTER (H5OPEN H5E_CANTFILTER_g) +H5_DLLVAR hid_t H5E_NOFILTER_g; /* Requested filter is not available */ +H5_DLLVAR hid_t H5E_CALLBACK_g; /* Callback failed */ +H5_DLLVAR hid_t H5E_CANAPPLY_g; /* Error from filter 'can apply' callback */ +H5_DLLVAR hid_t H5E_SETLOCAL_g; /* Error from filter 'set local' callback */ +H5_DLLVAR hid_t H5E_NOENCODER_g; /* Filter present but encoding disabled */ +H5_DLLVAR hid_t H5E_CANTFILTER_g; /* Filter operation failed */ + +/* Function entry/exit interface errors */ +#define H5E_CANTINIT (H5OPEN H5E_CANTINIT_g) +#define H5E_ALREADYINIT (H5OPEN H5E_ALREADYINIT_g) +#define H5E_CANTRELEASE (H5OPEN H5E_CANTRELEASE_g) +H5_DLLVAR hid_t H5E_CANTINIT_g; /* Unable to initialize object */ +H5_DLLVAR hid_t H5E_ALREADYINIT_g; /* Object already initialized */ +H5_DLLVAR hid_t H5E_CANTRELEASE_g; /* Unable to release object */ + +/* Group related errors */ +#define H5E_CANTOPENOBJ (H5OPEN H5E_CANTOPENOBJ_g) +#define H5E_CANTCLOSEOBJ (H5OPEN H5E_CANTCLOSEOBJ_g) +#define H5E_COMPLEN (H5OPEN H5E_COMPLEN_g) +#define H5E_PATH (H5OPEN H5E_PATH_g) +H5_DLLVAR hid_t H5E_CANTOPENOBJ_g; /* Can't open object */ +H5_DLLVAR hid_t H5E_CANTCLOSEOBJ_g; /* Can't close object */ +H5_DLLVAR hid_t H5E_COMPLEN_g; /* Name component is too long */ +H5_DLLVAR hid_t H5E_PATH_g; /* Problem with path to object */ + +/* Generic low-level file I/O errors */ +#define H5E_SEEKERROR (H5OPEN H5E_SEEKERROR_g) +#define H5E_READERROR (H5OPEN H5E_READERROR_g) +#define H5E_WRITEERROR (H5OPEN H5E_WRITEERROR_g) +#define H5E_CLOSEERROR (H5OPEN H5E_CLOSEERROR_g) +#define H5E_OVERFLOW (H5OPEN H5E_OVERFLOW_g) +#define H5E_FCNTL (H5OPEN H5E_FCNTL_g) +H5_DLLVAR hid_t H5E_SEEKERROR_g; /* Seek failed */ +H5_DLLVAR hid_t H5E_READERROR_g; /* Read failed */ +H5_DLLVAR hid_t H5E_WRITEERROR_g; /* Write failed */ +H5_DLLVAR hid_t H5E_CLOSEERROR_g; /* Close failed */ +H5_DLLVAR hid_t H5E_OVERFLOW_g; /* Address overflowed */ +H5_DLLVAR hid_t H5E_FCNTL_g; /* File control (fcntl) failed */ + +/* Free space errors */ +#define H5E_CANTMERGE (H5OPEN H5E_CANTMERGE_g) +#define H5E_CANTREVIVE (H5OPEN H5E_CANTREVIVE_g) +#define H5E_CANTSHRINK (H5OPEN H5E_CANTSHRINK_g) +H5_DLLVAR hid_t H5E_CANTMERGE_g; /* Can't merge objects */ +H5_DLLVAR hid_t H5E_CANTREVIVE_g; /* Can't revive object */ +H5_DLLVAR hid_t H5E_CANTSHRINK_g; /* Can't shrink container */ + +/* System level errors */ +#define H5E_SYSERRSTR (H5OPEN H5E_SYSERRSTR_g) +H5_DLLVAR hid_t H5E_SYSERRSTR_g; /* System error message */ + /* Datatype conversion errors */ #define H5E_CANTCONVERT (H5OPEN H5E_CANTCONVERT_g) #define H5E_BADSIZE (H5OPEN H5E_BADSIZE_g) H5_DLLVAR hid_t H5E_CANTCONVERT_g; /* Can't convert datatypes */ H5_DLLVAR hid_t H5E_BADSIZE_g; /* Bad size for object */ +/* Argument errors */ +#define H5E_UNINITIALIZED (H5OPEN H5E_UNINITIALIZED_g) +#define H5E_UNSUPPORTED (H5OPEN H5E_UNSUPPORTED_g) +#define H5E_BADTYPE (H5OPEN H5E_BADTYPE_g) +#define H5E_BADRANGE (H5OPEN H5E_BADRANGE_g) +#define H5E_BADVALUE (H5OPEN H5E_BADVALUE_g) +H5_DLLVAR hid_t H5E_UNINITIALIZED_g; /* Information is uinitialized */ +H5_DLLVAR hid_t H5E_UNSUPPORTED_g; /* Feature is unsupported */ +H5_DLLVAR hid_t H5E_BADTYPE_g; /* Inappropriate type */ +H5_DLLVAR hid_t H5E_BADRANGE_g; /* Out of range */ +H5_DLLVAR hid_t H5E_BADVALUE_g; /* Bad value */ + #ifdef __cplusplus } #endif diff --git a/src/H5Eterm.h b/src/H5Eterm.h index 2a8e11e..7238707 100644 --- a/src/H5Eterm.h +++ b/src/H5Eterm.h @@ -20,49 +20,41 @@ /* Reset major error IDs */ -H5E_DATASET_g= -H5E_FUNC_g= -H5E_STORAGE_g= -H5E_FILE_g= -H5E_SOHM_g= -H5E_SYM_g= -H5E_PLUGIN_g= -H5E_VFL_g= -H5E_INTERNAL_g= -H5E_BTREE_g= -H5E_REFERENCE_g= -H5E_DATASPACE_g= -H5E_RESOURCE_g= -H5E_PLIST_g= -H5E_LINK_g= -H5E_DATATYPE_g= -H5E_RS_g= -H5E_HEAP_g= -H5E_OHDR_g= -H5E_ATOM_g= -H5E_ATTR_g= +H5E_FSPACE_g= +H5E_SLIST_g= H5E_NONE_MAJOR_g= H5E_IO_g= -H5E_SLIST_g= -H5E_EFL_g= -H5E_TST_g= +H5E_REFERENCE_g= +H5E_RESOURCE_g= H5E_ARGS_g= +H5E_ATTR_g= +H5E_OHDR_g= H5E_ERROR_g= H5E_PLINE_g= -H5E_FSPACE_g= -H5E_CACHE_g= (-1); +H5E_TST_g= +H5E_DATATYPE_g= +H5E_LINK_g= +H5E_SYM_g= +H5E_EFL_g= +H5E_PLIST_g= +H5E_PLUGIN_g= +H5E_FILE_g= +H5E_SOHM_g= +H5E_VFL_g= +H5E_CACHE_g= +H5E_STORAGE_g= +H5E_HEAP_g= +H5E_RS_g= +H5E_FUNC_g= +H5E_ATOM_g= +H5E_DATASET_g= +H5E_INTERNAL_g= +H5E_DATASPACE_g= +H5E_BTREE_g= (-1); /* Reset minor error IDs */ -/* Generic low-level file I/O errors */ -H5E_SEEKERROR_g= -H5E_READERROR_g= -H5E_WRITEERROR_g= -H5E_CLOSEERROR_g= -H5E_OVERFLOW_g= -H5E_FCNTL_g= - /* Resource errors */ H5E_NOSPACE_g= H5E_CANTALLOC_g= @@ -75,30 +67,12 @@ H5E_CANTGC_g= H5E_CANTGETSIZE_g= H5E_OBJOPEN_g= -/* Heap errors */ -H5E_CANTRESTORE_g= -H5E_CANTCOMPUTE_g= -H5E_CANTEXTEND_g= -H5E_CANTATTACH_g= -H5E_CANTUPDATE_g= -H5E_CANTOPERATE_g= - -/* Function entry/exit interface errors */ -H5E_CANTINIT_g= -H5E_ALREADYINIT_g= -H5E_CANTRELEASE_g= - /* Property list errors */ H5E_CANTGET_g= H5E_CANTSET_g= H5E_DUPCLASS_g= H5E_SETDISALLOWED_g= -/* Free space errors */ -H5E_CANTMERGE_g= -H5E_CANTREVIVE_g= -H5E_CANTSHRINK_g= - /* Object header related errors */ H5E_LINKCOUNT_g= H5E_VERSION_g= @@ -110,29 +84,9 @@ H5E_CANTPACK_g= H5E_CANTRESET_g= H5E_CANTRENAME_g= -/* System level errors */ -H5E_SYSERRSTR_g= - -/* I/O pipeline errors */ -H5E_NOFILTER_g= -H5E_CALLBACK_g= -H5E_CANAPPLY_g= -H5E_SETLOCAL_g= -H5E_NOENCODER_g= -H5E_CANTFILTER_g= - -/* Group related errors */ -H5E_CANTOPENOBJ_g= -H5E_CANTCLOSEOBJ_g= -H5E_COMPLEN_g= -H5E_PATH_g= - /* No error */ H5E_NONE_MINOR_g= -/* Plugin errors */ -H5E_OPENERROR_g= - /* File accessibilty errors */ H5E_FILEEXISTS_g= H5E_FILEOPEN_g= @@ -152,6 +106,22 @@ H5E_CANTINC_g= H5E_CANTDEC_g= H5E_NOIDS_g= +/* Plugin errors */ +H5E_OPENERROR_g= + +/* Dataspace errors */ +H5E_CANTCLIP_g= +H5E_CANTCOUNT_g= +H5E_CANTSELECT_g= +H5E_CANTNEXT_g= +H5E_BADSELECT_g= +H5E_CANTCOMPARE_g= + +/* Parallel MPI errors */ +H5E_MPI_g= +H5E_MPIERRSTR_g= +H5E_CANTRECV_g= + /* Cache related errors */ H5E_CANTFLUSH_g= H5E_CANTSERIALIZE_g= @@ -169,6 +139,14 @@ H5E_CANTDIRTY_g= H5E_CANTEXPUNGE_g= H5E_CANTRESIZE_g= +/* Heap errors */ +H5E_CANTRESTORE_g= +H5E_CANTCOMPUTE_g= +H5E_CANTEXTEND_g= +H5E_CANTATTACH_g= +H5E_CANTUPDATE_g= +H5E_CANTOPERATE_g= + /* Link related errors */ H5E_TRAVERSE_g= H5E_NLINKS_g= @@ -176,26 +154,6 @@ H5E_NOTREGISTERED_g= H5E_CANTMOVE_g= H5E_CANTSORT_g= -/* Parallel MPI errors */ -H5E_MPI_g= -H5E_MPIERRSTR_g= -H5E_CANTRECV_g= - -/* Dataspace errors */ -H5E_CANTCLIP_g= -H5E_CANTCOUNT_g= -H5E_CANTSELECT_g= -H5E_CANTNEXT_g= -H5E_BADSELECT_g= -H5E_CANTCOMPARE_g= - -/* Argument errors */ -H5E_UNINITIALIZED_g= -H5E_UNSUPPORTED_g= -H5E_BADTYPE_g= -H5E_BADRANGE_g= -H5E_BADVALUE_g= - /* B-tree related errors */ H5E_NOTFOUND_g= H5E_EXISTS_g= @@ -209,8 +167,50 @@ H5E_CANTLIST_g= H5E_CANTMODIFY_g= H5E_CANTREMOVE_g= +/* I/O pipeline errors */ +H5E_NOFILTER_g= +H5E_CALLBACK_g= +H5E_CANAPPLY_g= +H5E_SETLOCAL_g= +H5E_NOENCODER_g= +H5E_CANTFILTER_g= + +/* Function entry/exit interface errors */ +H5E_CANTINIT_g= +H5E_ALREADYINIT_g= +H5E_CANTRELEASE_g= + +/* Group related errors */ +H5E_CANTOPENOBJ_g= +H5E_CANTCLOSEOBJ_g= +H5E_COMPLEN_g= +H5E_PATH_g= + +/* Generic low-level file I/O errors */ +H5E_SEEKERROR_g= +H5E_READERROR_g= +H5E_WRITEERROR_g= +H5E_CLOSEERROR_g= +H5E_OVERFLOW_g= +H5E_FCNTL_g= + +/* Free space errors */ +H5E_CANTMERGE_g= +H5E_CANTREVIVE_g= +H5E_CANTSHRINK_g= + +/* System level errors */ +H5E_SYSERRSTR_g= + /* Datatype conversion errors */ H5E_CANTCONVERT_g= -H5E_BADSIZE_g= (-1); +H5E_BADSIZE_g= + +/* Argument errors */ +H5E_UNINITIALIZED_g= +H5E_UNSUPPORTED_g= +H5E_BADTYPE_g= +H5E_BADRANGE_g= +H5E_BADVALUE_g= (-1); #endif /* H5Eterm_H */ diff --git a/tools/h5repack/CMakeLists.txt b/tools/h5repack/CMakeLists.txt index fb293f1..b108f31 100644 --- a/tools/h5repack/CMakeLists.txt +++ b/tools/h5repack/CMakeLists.txt @@ -112,6 +112,19 @@ if (BUILD_TESTING) ) endif () +# -------------------------------------------------------------------- +# Add the h5repack test executable +# -------------------------------------------------------------------- + if (HDF5_BUILD_GENERATORS AND NOT ONLY_SHARED_LIBS) + add_executable (h5repackgentest ${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/h5repackgentest.c) + target_include_directories (h5repackgentest PRIVATE "${HDF5_SRC_DIR};${HDF5_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>") + TARGET_C_PROPERTIES (h5repackgentest STATIC) + target_link_libraries (h5repackgentest PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET}) + set_target_properties (h5repackgentest PROPERTIES FOLDER generator/tools) + + #add_test (NAME h5repackgentest COMMAND ${CMAKE_CROSSCOMPILING_EMULATOR} $<TARGET_FILE:h5repackgentest>) + endif () + include (CMakeTests.cmake) endif () diff --git a/tools/h5repack/CMakeTests.cmake b/tools/h5repack/CMakeTests.cmake index b1d9a05..a05c4d7 100644 --- a/tools/h5repack/CMakeTests.cmake +++ b/tools/h5repack/CMakeTests.cmake @@ -25,10 +25,23 @@ ${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/testfiles/h5repack_deflate.h5 ${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/testfiles/h5repack_early.h5 ${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/testfiles/h5repack_ext.h5 + ${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/testfiles/h5repack_f32le.h5 + ${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/testfiles/h5repack_f32le_ex-0.dat + ${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/testfiles/h5repack_f32le_ex.h5 ${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/testfiles/h5repack_fill.h5 ${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/testfiles/h5repack_filters.h5 ${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/testfiles/h5repack_fletcher.h5 ${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/testfiles/h5repack_hlink.h5 + ${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/testfiles/h5repack_int32le_1d.h5 + ${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/testfiles/h5repack_int32le_1d_ex-0.dat + ${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/testfiles/h5repack_int32le_1d_ex-1.dat + ${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/testfiles/h5repack_int32le_1d_ex.h5 + ${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/testfiles/h5repack_int32le_2d.h5 + ${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/testfiles/h5repack_int32le_2d_ex-0.dat + ${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/testfiles/h5repack_int32le_2d_ex.h5 + ${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/testfiles/h5repack_int32le_3d.h5 + ${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/testfiles/h5repack_int32le_3d_ex-0.dat + ${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/testfiles/h5repack_int32le_3d_ex.h5 ${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/testfiles/h5repack_layout.h5 ${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/testfiles/h5repack_layouto.h5 ${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/testfiles/h5repack_layout2.h5 @@ -41,6 +54,12 @@ ${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/testfiles/h5repack_shuffle.h5 ${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/testfiles/h5repack_soffset.h5 ${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/testfiles/h5repack_szip.h5 + ${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/testfiles/h5repack_uint8be.h5 + ${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/testfiles/h5repack_uint8be_ex-0.dat + ${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/testfiles/h5repack_uint8be_ex-1.dat + ${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/testfiles/h5repack_uint8be_ex-2.dat + ${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/testfiles/h5repack_uint8be_ex-3.dat + ${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/testfiles/h5repack_uint8be_ex.h5 # h5diff/testfile ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_attr1.h5 # tools/testfiles @@ -551,6 +570,104 @@ endif () endmacro () + macro (ADD_H5_EXTERNAL_TEST testname testtype testfile) + # canonical file = h5repack_${testfile}.h5 - preexist + # external file = h5repack_${testfile}_ex.h5 - preexist + # repacked file = h5repack_${testfile}_rp.h5 - created + # external data file = h5repack_${testfile}_ex-0.dat + if ("${testtype}" STREQUAL "SKIP") + if (NOT HDF5_ENABLE_USING_MEMCHECKER) + add_test ( + NAME H5REPACK_EXTERNAL-${testname} + COMMAND ${CMAKE_COMMAND} -E echo "SKIP ${ARGN} ${PROJECT_BINARY_DIR}/testfiles/${testfile} ${PROJECT_BINARY_DIR}/testfiles/out-${testname}.${testfile}" + ) + set_property(TEST H5REPACK_EXTERNAL-${testname} PROPERTY DISABLED) + endif () + else () + add_test ( + NAME H5REPACK_EXTERNAL-${testname}-clear-objects + COMMAND ${CMAKE_COMMAND} -E remove h5repack_${testfile}_rp.h5 + ) + set_tests_properties (H5REPACK_EXTERNAL-${testname}-clear-objects PROPERTIES + WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles" + FIXTURES_REQUIRED clear_h5repack + ) + # make sure external data file 0 is available + add_test ( + NAME H5REPACK_EXTERNAL-${testname}_CPY + COMMAND ${CMAKE_COMMAND} -E copy_if_different + "${PROJECT_SOURCE_DIR}/testfiles/h5repack_${testfile}_ex-0.dat" "${PROJECT_BINARY_DIR}/testfiles/h5repack_${testfile}_ex-0.dat" + ) + set_tests_properties (H5REPACK_EXTERNAL-${testname}_CPY PROPERTIES + WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles" + DEPENDS H5REPACK_EXTERNAL-${testname}-clear-objects + ) + # comparison of known files + add_test ( + NAME H5REPACK_EXTERNAL-${testname}_DFF1 + COMMAND ${CMAKE_CROSSCOMPILING_EMULATOR} $<TARGET_FILE:h5diff${tgt_ext}> --enable-error-stack ${PROJECT_BINARY_DIR}/testfiles/h5repack_${testfile}.h5 ${PROJECT_BINARY_DIR}/testfiles/h5repack_${testfile}_ex.h5 + ) + set_tests_properties (H5REPACK_EXTERNAL-${testname}_DFF1 PROPERTIES + WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles" + DEPENDS H5REPACK_EXTERNAL-${testname}_CPY + ) + # repack the external file to the repacked file + add_test ( + NAME H5REPACK_EXTERNAL-${testname} + COMMAND ${CMAKE_CROSSCOMPILING_EMULATOR} $<TARGET_FILE:h5repack${tgt_ext}> --enable-error-stack ${ARGN} ${PROJECT_BINARY_DIR}/testfiles/h5repack_${testfile}_ex.h5 ${PROJECT_BINARY_DIR}/testfiles/h5repack_${testfile}_rp.h5 + ) + set_tests_properties (H5REPACK_EXTERNAL-${testname} PROPERTIES + WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles" + DEPENDS H5REPACK_EXTERNAL-${testname}_DFF1 + ) + # comparison of repacked file to known files + add_test ( + NAME H5REPACK_EXTERNAL-${testname}_DFF2 + COMMAND ${CMAKE_CROSSCOMPILING_EMULATOR} $<TARGET_FILE:h5diff${tgt_ext}> --enable-error-stack ${PROJECT_BINARY_DIR}/testfiles/h5repack_${testfile}_rp.h5 ${PROJECT_BINARY_DIR}/testfiles/h5repack_${testfile}.h5 + ) + set_tests_properties (H5REPACK_EXTERNAL-${testname}_DFF2 PROPERTIES + WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles" + DEPENDS H5REPACK_EXTERNAL-${testname} + ) + add_test ( + NAME H5REPACK_EXTERNAL-${testname}_DFF3 + COMMAND ${CMAKE_CROSSCOMPILING_EMULATOR} $<TARGET_FILE:h5diff${tgt_ext}> --enable-error-stack ${PROJECT_BINARY_DIR}/testfiles/h5repack_${testfile}_rp.h5 ${PROJECT_BINARY_DIR}/testfiles/h5repack_${testfile}_ex.h5 + ) + set_tests_properties (H5REPACK_EXTERNAL-${testname}_DFF3 PROPERTIES + WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles" + DEPENDS H5REPACK_EXTERNAL-${testname}_DFF2 + ) + # invalidate external file by removing its first data file + add_test ( + NAME H5REPACK_EXTERNAL-${testname}_DATA_RMV + COMMAND ${CMAKE_COMMAND} -E remove h5repack_${testfile}_ex-0.dat + ) + set_tests_properties (H5REPACK_EXTERNAL-${testname}_DATA_RMV PROPERTIES + WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles" + DEPENDS H5REPACK_EXTERNAL-${testname}_DFF3 + ) + # verify comparison of repacked file to known file + add_test ( + NAME H5REPACK_EXTERNAL-${testname}_DFF4 + COMMAND ${CMAKE_CROSSCOMPILING_EMULATOR} $<TARGET_FILE:h5diff${tgt_ext}> --enable-error-stack ${PROJECT_BINARY_DIR}/testfiles/h5repack_${testfile}_rp.h5 ${PROJECT_BINARY_DIR}/testfiles/h5repack_${testfile}.h5 + ) + set_tests_properties (H5REPACK_EXTERNAL-${testname}_DFF4 PROPERTIES + WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles" + DEPENDS H5REPACK_EXTERNAL-${testname}_DATA_RMV + ) + # verify comparison of repacked file to known external file fails + add_test ( + NAME H5REPACK_EXTERNAL-${testname}_DFF_FAIL + COMMAND ${CMAKE_CROSSCOMPILING_EMULATOR} $<TARGET_FILE:h5diff${tgt_ext}> --enable-error-stack ${PROJECT_BINARY_DIR}/testfiles/h5repack_${testfile}_rp.h5 ${PROJECT_BINARY_DIR}/testfiles/h5repack_${testfile}_ex.h5 + ) + set_tests_properties (H5REPACK_EXTERNAL-${testname}_DFF_FAIL PROPERTIES + WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles" + DEPENDS H5REPACK_EXTERNAL-${testname}_DFF4 + WILL_FAIL "true" + ) + endif () + endmacro () + ############################################################################## ############################################################################## ### T H E T E S T S ### @@ -1109,6 +1226,15 @@ ADD_H5_TEST_META (meta_long h5repack_layout.h5 --metadata_block_size=8192) ############################################################################## +### E X T E R N A L S T O R A G E T E S T S +############################################################################## +ADD_H5_EXTERNAL_TEST (ext_f32le "TEST" f32le -l CONTI) +ADD_H5_EXTERNAL_TEST (ext_int32le_1d "TEST" int32le_1d -l CONTI) +ADD_H5_EXTERNAL_TEST (ext_int32le_2d "TEST" int32le_2d -l CONTI) +ADD_H5_EXTERNAL_TEST (ext_int32le_3d "TEST" int32le_3d -l CONTI) +ADD_H5_EXTERNAL_TEST (ext_uint8be "TEST" uint8be -l CONTI) + +############################################################################## ### P L U G I N T E S T S ############################################################################## if (BUILD_SHARED_LIBS) diff --git a/tools/h5repack/Makefile.am b/tools/h5repack/Makefile.am index dac7aa9..284bca3 100644 --- a/tools/h5repack/Makefile.am +++ b/tools/h5repack/Makefile.am @@ -19,12 +19,12 @@ include $(top_srcdir)/config/commence.am # Include src, test, and tools/lib directories -AM_CPPFLAGS+=-I$(top_srcdir)/src -I$(top_srcdir)/test -I$(top_srcdir)/tools/lib +AM_CPPFLAGS+=-I$(top_srcdir)/src -I$(top_srcdir)/test -I$(top_srcdir)/tools/lib -I$(top_srcdir)/tools/h5repack # Test programs and scripts if BUILD_TESTS_CONDITIONAL TEST_SCRIPT=h5repack.sh -TEST_PROG=h5repacktst +TEST_PROG=h5repacktst h5repackgentest noinst_PROGRAMS=testh5repack_detect_szip if HAVE_SHARED_CONDITIONAL if USE_PLUGINS_CONDITIONAL @@ -87,7 +87,8 @@ endif # Temporary files. *.h5 are generated by h5repack. They should # copied to the testfiles/ directory if update is required. -CHECK_CLEANFILES+=*.h5 *.bin testfiles/h5diff_attr1.h5 testfiles/tfamily*.h5 +# *.dat files may be created by h5repackgentest. +CHECK_CLEANFILES+=*.h5 *.dat *.bin testfiles/h5diff_attr1.h5 testfiles/tfamily*.h5 DISTCLEANFILES=h5repack.sh h5repack_plugin.sh include $(top_srcdir)/config/conclude.am diff --git a/tools/h5repack/h5repack.c b/tools/h5repack/h5repack.c index b6f332a..0fd30ac 100644 --- a/tools/h5repack/h5repack.c +++ b/tools/h5repack/h5repack.c @@ -41,7 +41,9 @@ static int have_request(pack_opt_t *options); * Return: 0, ok, -1, fail *------------------------------------------------------------------------- */ -int h5repack(const char* infile, const char* outfile, pack_opt_t *options) { +int +h5repack(const char* infile, const char* outfile, pack_opt_t *options) +{ /* check input */ if (check_options(options) < 0) return -1; @@ -55,7 +57,7 @@ int h5repack(const char* infile, const char* outfile, pack_opt_t *options) { return -1; return 0; -} +} /* end h5repack() */ /*------------------------------------------------------------------------- * Function: h5repack_init @@ -84,7 +86,7 @@ h5repack_init(pack_opt_t *options, int verbose, hbool_t latest) } return (options_table_init(&(options->op_tbl))); -} +} /* end h5repack_init() */ /*------------------------------------------------------------------------- * Function: h5repack_end @@ -93,9 +95,11 @@ h5repack_init(pack_opt_t *options, int verbose, hbool_t latest) *------------------------------------------------------------------------- */ -int h5repack_end(pack_opt_t *options) { +int +h5repack_end(pack_opt_t *options) +{ return options_table_free(options->op_tbl); -} +} /* end h5repack_end() */ /*------------------------------------------------------------------------- * Function: h5repack_addfilter @@ -136,7 +140,7 @@ h5repack_addfilter(const char *str, pack_opt_t *options) HDfree(obj_list); return 0; -} +} /* end h5repack_addfilter() */ /*------------------------------------------------------------------------- * Function: h5repack_addlayout @@ -173,7 +177,7 @@ h5repack_addlayout(const char *str, pack_opt_t *options) if (pack.layout == H5D_CHUNKED) { /* -2 means the NONE option, remove chunking and set the global layout to contiguous */ - if (pack.chunk.rank == -2) + if (pack.chunk.rank == -2) /* TODO: fix 'magic number' */ options->layout_g = H5D_CONTIGUOUS; /* otherwise set the global chunking type */ else { @@ -190,10 +194,10 @@ h5repack_addlayout(const char *str, pack_opt_t *options) HDfree(obj_list); ret_value = 0; - } + } /* end if obj_list exists */ return ret_value; -} +} /* end h5repack_addlayout() */ /* Note: The below copy_named_datatype(), named_datatype_free(), copy_attr() * were located in h5repack_copy.c as static prior to bugfix1726. @@ -213,8 +217,9 @@ h5repack_addlayout(const char *str, pack_opt_t *options) * to free the stack. *------------------------------------------------------------------------- */ -hid_t copy_named_datatype(hid_t type_in, hid_t fidout, - named_dt_t **named_dt_head_p, trav_table_t *travt, pack_opt_t *options) { +hid_t +copy_named_datatype(hid_t type_in, hid_t fidout, named_dt_t **named_dt_head_p, trav_table_t *travt, pack_opt_t *options) +{ named_dt_t *dt = *named_dt_head_p; /* Stack pointer */ named_dt_t *dt_ret = NULL; /* Datatype to return */ H5O_info_t oinfo; /* Object info of input dtype */ @@ -248,13 +253,14 @@ hid_t copy_named_datatype(hid_t type_in, hid_t fidout, /* Check if this type is the one requested */ if (oinfo.addr == dt->addr_in) { dt_ret = dt; - } /* end if */ - } /* end if */ - } /* end for */ - } /* end else */ + } + } /* end if named datatype */ + } /* end for each object in traversal table */ + } /* end else (create the stack) */ /* Handle the case that the requested datatype was not found. This is - * possible if the datatype was committed anonymously in the input file. */ + * possible if the datatype was committed anonymously in the input file. + */ if (!dt_ret) { /* Push the new datatype onto the stack */ if (NULL == (dt_ret = (named_dt_t *)HDmalloc(sizeof(named_dt_t)))) @@ -265,10 +271,11 @@ hid_t copy_named_datatype(hid_t type_in, hid_t fidout, /* Update the address and id */ dt_ret->addr_in = oinfo.addr; dt_ret->id_out = -1; - } /* end if */ + } /* end if requested datatype not found */ /* If the requested datatype does not yet exist in the output file, copy it - * anonymously */ + * anonymously + */ if (dt_ret->id_out < 0) { if (options->use_native == 1) dt_ret->id_out = H5Tget_native_type(type_in, H5T_DIR_DEFAULT); @@ -278,18 +285,20 @@ hid_t copy_named_datatype(hid_t type_in, hid_t fidout, HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Tget_native_type-H5Tcopy failed"); if (H5Tcommit_anon(fidout, dt_ret->id_out, H5P_DEFAULT, H5P_DEFAULT) < 0) HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Tcommit_anon failed"); - } /* end if */ + } /* end if named datatype not yet in output file */ /* Set return value */ ret_value = dt_ret->id_out; - /* Increment the ref count on id_out, because the calling function will try to close it */ - if(H5Iinc_ref(ret_value) < 0) + /* Increment the ref count on id_out, because the calling function will try + * to close it. (TODO: fix scope envy) + */ + if (H5Iinc_ref(ret_value) < 0) HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Iinc_ref failed"); done: return ret_value; -} /* end copy_named_datatype */ +} /* end copy_named_datatype() */ /*------------------------------------------------------------------------- * Function: named_datatype_free @@ -297,7 +306,9 @@ done: * Purpose: Frees the stack of named datatypes. *------------------------------------------------------------------------- */ -int named_datatype_free(named_dt_t **named_dt_head_p, int ignore_err) { +int +named_datatype_free(named_dt_t **named_dt_head_p, int ignore_err) +{ named_dt_t *dt = *named_dt_head_p; int ret_value = -1; @@ -308,13 +319,13 @@ int named_datatype_free(named_dt_t **named_dt_head_p, int ignore_err) { dt = dt->next; HDfree(*named_dt_head_p); *named_dt_head_p = dt; - } /* end while */ + } ret_value = 0; done: return (ret_value); -} /* end named_datatype_free */ +} /* end named_datatype_free() */ /*------------------------------------------------------------------------- * Function: copy_attr @@ -328,8 +339,7 @@ done: *------------------------------------------------------------------------- */ int -copy_attr(hid_t loc_in, hid_t loc_out, named_dt_t **named_dt_head_p, - trav_table_t *travt, pack_opt_t *options) +copy_attr(hid_t loc_in, hid_t loc_out, named_dt_t **named_dt_head_p, trav_table_t *travt, pack_opt_t *options) { int ret_value = 0; hid_t attr_id = -1; /* attr ID */ @@ -362,7 +372,6 @@ copy_attr(hid_t loc_in, hid_t loc_out, named_dt_t **named_dt_head_p, if ((attr_id = H5Aopen_by_idx(loc_in, ".", H5_INDEX_CRT_ORDER, H5_ITER_INC, (hsize_t) u, H5P_DEFAULT, H5P_DEFAULT)) < 0) HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Aopen_by_idx failed"); - /* get name */ if (H5Aget_name(attr_id, (size_t) 255, name) < 0) HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pclose failed"); @@ -384,17 +393,17 @@ copy_attr(hid_t loc_in, hid_t loc_out, named_dt_t **named_dt_head_p, if ((wtype_id = copy_named_datatype(ftype_id, fidout, named_dt_head_p, travt, options)) < 0) { H5Fclose(fidout); HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "copy_named_datatype failed"); - } /* end if */ + } if (H5Fclose(fidout) < 0) HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Fclose failed"); - } /* end if */ + } /* end if datatype is committed and we have a traversal table */ else { if (options->use_native == 1) wtype_id = H5Tget_native_type(ftype_id, H5T_DIR_DEFAULT); else wtype_id = H5Tcopy(ftype_id); - } /* end else */ + } /* end else: uncommitted datatype and/or no traversal table */ /* get the dataspace handle */ if ((space_id = H5Aget_space(attr_id)) < 0) @@ -411,12 +420,12 @@ copy_attr(hid_t loc_in, hid_t loc_out, named_dt_t **named_dt_head_p, if ((msize = H5Tget_size(wtype_id)) == 0) HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Tget_size failed"); - /*------------------------------------------------------------------------- - * object references are a special case. We cannot just copy the buffers, - * but instead we recreate the reference. - * This is done on a second sweep of the file that just copies the referenced - * objects at copy_refs_attr() - *------------------------------------------------------------------------- + /*--------------------------------------------------------------------- + * object references are a special case. We cannot just copy the + * buffers, but instead we recreate the reference. + * This is done on a second sweep of the file that just copies the + * referenced objects at copy_refs_attr(). + *--------------------------------------------------------------------- */ type_class = H5Tget_class(wtype_id); is_ref = (type_class == H5T_REFERENCE); @@ -427,7 +436,7 @@ copy_attr(hid_t loc_in, hid_t loc_out, named_dt_t **named_dt_head_p, is_ref = (is_ref || (H5Tget_class(base_type) == H5T_REFERENCE)); if (H5Tclose(base_type) < 0) H5TOOLS_INFO(H5E_tools_min_id_g, "H5Tclose base_type failed"); - } + } /* end if type_class is variable length or array */ if (type_class == H5T_COMPOUND) { int nmembers = H5Tget_nmembers(wtype_id); @@ -442,13 +451,13 @@ copy_attr(hid_t loc_in, hid_t loc_out, named_dt_t **named_dt_head_p, is_ref = 1; break; } - } /* for (j=0; i<nmembers; j++) */ - } /* if (type_class == H5T_COMPOUND) */ + } /* end for each member */ + } /* end if type_class is H5T_COMPOUND */ if (!is_ref) { - /*------------------------------------------------------------------------- + /*----------------------------------------------------------------- * read to memory - *------------------------------------------------------------------------- + *----------------------------------------------------------------- */ buf = (void *)HDmalloc((size_t)(nelmts * msize)); @@ -458,9 +467,9 @@ copy_attr(hid_t loc_in, hid_t loc_out, named_dt_t **named_dt_head_p, if (H5Aread(attr_id, wtype_id, buf) < 0) HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Aread failed"); - /*------------------------------------------------------------------------- + /*----------------------------------------------------------------- * copy - *------------------------------------------------------------------------- + *----------------------------------------------------------------- */ if ((attr_out = H5Acreate2(loc_out, name, wtype_id, space_id, H5P_DEFAULT, H5P_DEFAULT)) < 0) @@ -483,9 +492,9 @@ copy_attr(hid_t loc_in, hid_t loc_out, named_dt_t **named_dt_head_p, if (options->verbose) HDprintf(FORMAT_OBJ_ATTR, "attr", name); - /*------------------------------------------------------------------------- + /*--------------------------------------------------------------------- * close - *------------------------------------------------------------------------- + *--------------------------------------------------------------------- */ if (H5Sclose(space_id) < 0) HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Sclose failed"); @@ -499,19 +508,18 @@ copy_attr(hid_t loc_in, hid_t loc_out, named_dt_t **named_dt_head_p, if (H5Aclose(attr_id) < 0) HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Aclose failed"); attr_id = -1; - } /* for u */ + } /* for u (each attribute) */ done: H5E_BEGIN_TRY { if (buf) { - /* Check if we have VL data and string in the attribute's datatype that must - * be reclaimed */ + /* Check if we have VL data and string in the attribute's + * datatype that must be reclaimed + */ if (TRUE == h5tools_detect_vlen(wtype_id)) H5Dvlen_reclaim(wtype_id, space_id, H5P_DEFAULT, buf); - - /* Free buf */ HDfree(buf); - } /* end if */ + } H5Aclose(attr_out); H5Sclose(space_id); @@ -523,25 +531,27 @@ done: return ret_value; } /* end copy_attr() */ -/*------------------------------------------------------------------------- +/*----------------------------------------------------------------------------- * Function: check_options * * Purpose: print options, checks for invalid options * * Return: void, return -1 on error - *------------------------------------------------------------------------- + *----------------------------------------------------------------------------- */ -static int check_options(pack_opt_t *options) { +static int +check_options(pack_opt_t *options) +{ int ret_value = 0; /*no need to LEAVE() on ERROR: HERR_INIT(int, SUCCEED) */ unsigned int i; int k, j, has_cp = 0, has_ck = 0; char slayout[30]; /*------------------------------------------------------------------------- - * objects to layout - *------------------------------------------------------------------------- - */ - if (options->verbose && have_request(options) /* only print if requested */) { + * Objects to layout + *------------------------------------------------------------------------- + */ + if (options->verbose && have_request(options)) { if (options->all_layout == 1) { HDprintf("All objects to modify layout are...\n"); switch (options->layout_g) { @@ -572,7 +582,7 @@ static int check_options(pack_opt_t *options) { } else HDprintf("No all objects to modify layout\n"); - }/* verbose */ + } /* end if verbose */ for (i = 0; i < options->op_tbl->nelems; i++) { char* name = options->op_tbl->objs[i].path; @@ -586,22 +596,22 @@ static int check_options(pack_opt_t *options) { } has_ck = 1; } - else if (options->op_tbl->objs[i].chunk.rank == -2) { + else if (options->op_tbl->objs[i].chunk.rank == -2) { /* TODO: replace 'magic number' */ if (options->verbose) HDprintf(" <%s> %s\n", name, "NONE (contiguous)"); has_ck = 1; } - } + } /* end for each object in options */ if (options->all_layout == 1 && has_ck) HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "invalid chunking input: 'all' option is present with other objects"); /*------------------------------------------------------------------------- - * objects to filter - *------------------------------------------------------------------------- - */ + * Objects to filter + *------------------------------------------------------------------------- + */ - if (options->verbose && have_request(options) /* only print if requested */) { + if (options->verbose && have_request(options)) { if (options->all_filter == 1) { HDprintf("All objects to apply filter are...\n"); for (k = 0; k < options->n_filter_g; k++) { @@ -625,12 +635,12 @@ static int check_options(pack_opt_t *options) { default: HDprintf(" User Defined %d\n", filtn); break; - } /* k */ - }; - } + } /* end switch */ + } /* end for each filter */ + } /* end if options->all_filter == 1 (TODO: meaning) */ else HDprintf("No all objects to apply filter\n"); - } /* verbose */ + } /* end if verbose */ for (i = 0; i < options->op_tbl->nelems; i++) { pack_info_t pack = options->op_tbl->objs[i]; @@ -638,24 +648,26 @@ static int check_options(pack_opt_t *options) { for (j = 0; j < pack.nfilters; j++) { if (options->verbose) { - if(pack.filter[j].filtn >= 0) { - if(pack.filter[j].filtn > H5Z_FILTER_SCALEOFFSET) + if (pack.filter[j].filtn >= 0) { + if (pack.filter[j].filtn > H5Z_FILTER_SCALEOFFSET) { HDprintf(" <%s> with %s filter %d\n", name, get_sfilter(pack.filter[j].filtn), pack.filter[j].filtn); - else + } + else { HDprintf(" <%s> with %s filter\n", name, get_sfilter(pack.filter[j].filtn)); + } } } has_cp = 1; - } /* j */ - } /* i */ + } /* end for each filter */ + } /* end for each object in options table */ if (options->all_filter == 1 && has_cp) HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "invalid compression input: 'all' option is present with other objects"); /*------------------------------------------------------------------------- - * check options for the latest format - *------------------------------------------------------------------------- - */ + * Check options for the latest format + *------------------------------------------------------------------------- + */ if (options->grp_compact < 0) HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "invalid maximum number of links to store as header messages"); @@ -667,10 +679,10 @@ static int check_options(pack_opt_t *options) { if (options->msg_size[i] < 0) HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "invalid shared message size"); - /*-------------------------------------------------------------------------------- - * verify new user userblock options; file name must be present - *--------------------------------------------------------------------------------- - */ + /*------------------------------------------------------------------------ + * Verify new user userblock options; file name must be present + *------------------------------------------------------------------------ + */ if (options->ublock_filename != NULL && options->ublock_size == 0) { if (options->verbose) { HDprintf("Warning: user block size missing for file %s. Assigning a default size of 1024...\n", options->ublock_filename); @@ -681,35 +693,37 @@ static int check_options(pack_opt_t *options) { if (options->ublock_filename == NULL && options->ublock_size != 0) HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "file name missing for user block", options->ublock_filename); - /*-------------------------------------------------------------------------------- - * verify alignment options; threshold is zero default but alignment not - *--------------------------------------------------------------------------------- - */ + /*------------------------------------------------------------------------ + * Verify alignment options; threshold is zero default but alignment not + *------------------------------------------------------------------------ + */ if (options->alignment == 0 && options->threshold != 0) HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "alignment for H5Pset_alignment missing"); done: return ret_value; -} +} /* end check_options() */ /*------------------------------------------------------------------------- * Function: check_objects * - * Purpose: locate all HDF5 objects in the file and compare with user - * supplied list + * Purpose: Locate all HDF5 objects in the file and compare with user-supplied + * list. * * Return: 0, ok, -1 no *------------------------------------------------------------------------- */ -static int check_objects(const char* fname, pack_opt_t *options) { - int ret_value = 0; /*no need to LEAVE() on ERROR: HERR_INIT(int, SUCCEED) */ +static int +check_objects(const char* fname, pack_opt_t *options) +{ hid_t fid = -1; hid_t did = -1; hid_t sid = -1; unsigned int i; int ifil; trav_table_t *travt = NULL; + int ret_value = 0; /*no need to LEAVE() on ERROR: HERR_INIT(int, SUCCEED) */ /* nothing to do */ if (options->op_tbl->nelems == 0) @@ -745,7 +759,9 @@ static int check_objects(const char* fname, pack_opt_t *options) { HDprintf("Opening file. Searching %zu objects to modify ...\n", travt->nobjs); for (i = 0; i < options->op_tbl->nelems; i++) { - char* name = options->op_tbl->objs[i].path; + pack_info_t obj = options->op_tbl->objs[i]; + char* name = obj.path; + if (options->verbose) HDprintf(" <%s>", name); @@ -756,24 +772,24 @@ static int check_objects(const char* fname, pack_opt_t *options) { if (options->verbose) HDprintf("...Found\n"); - for (ifil = 0; ifil < options->op_tbl->objs[i].nfilters; ifil++) { - if (options->op_tbl->objs[i].filter[ifil].filtn < 0) + for (ifil = 0; ifil < obj.nfilters; ifil++) { + if (obj.filter[ifil].filtn < 0) HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "invalid filter"); /* check for extra filter conditions */ - switch (options->op_tbl->objs[i].filter[ifil].filtn) { + switch (obj.filter[ifil].filtn) { /* chunk size must be smaller than pixels per block */ case H5Z_FILTER_SZIP: { int j; hsize_t csize = 1; - unsigned ppb = options->op_tbl->objs[i].filter[ifil].cd_values[0]; + unsigned ppb = obj.filter[ifil].cd_values[0]; hsize_t dims[H5S_MAX_RANK]; int rank; - if (options->op_tbl->objs[i].chunk.rank > 0) { - rank = options->op_tbl->objs[i].chunk.rank; + if (obj.chunk.rank > 0) { + rank = obj.chunk.rank; for (j = 0; j < rank; j++) - csize *= options->op_tbl->objs[i].chunk.chunk_lengths[j]; + csize *= obj.chunk.chunk_lengths[j]; } else { if ((did = H5Dopen2(fid, name, H5P_DEFAULT)) < 0) @@ -797,13 +813,13 @@ static int check_objects(const char* fname, pack_opt_t *options) { HDprintf(" <warning: SZIP settings, chunk size is smaller than pixels per block>\n"); HGOTO_DONE(0); } - } + } /* end case SZIP */ break; default: break; - } - } /* for ifil */ - } /* for i */ + } /* end switch */ + } /* for ifil (each user-defined filter) */ + } /* for i (each object in options traversal table) */ done: H5E_BEGIN_TRY { @@ -814,7 +830,7 @@ done: if (travt) trav_table_free(travt); return ret_value; -} +} /* end check_objects() */ /*------------------------------------------------------------------------- * Function: have_request @@ -824,14 +840,15 @@ done: * Return: 1 yes, 0 no *------------------------------------------------------------------------- */ -static int have_request(pack_opt_t *options) { +static int +have_request(pack_opt_t *options) +{ if (options->all_filter || options->all_layout || options->op_tbl->nelems) return 1; return 0; - -} +} /* end have_request() */ /*------------------------------------------------------------------------- * Function: get_sfilter @@ -841,8 +858,9 @@ static int have_request(pack_opt_t *options) { * Return: name of filter, exit on error *------------------------------------------------------------------------- */ - -static const char* get_sfilter(H5Z_filter_t filtn) { +static const char * +get_sfilter(H5Z_filter_t filtn) +{ if (filtn < 0) return NULL; else if (filtn == H5Z_FILTER_NONE) @@ -861,5 +879,5 @@ static const char* get_sfilter(H5Z_filter_t filtn) { return "SOFF"; else return "UD"; -} +} /* end get_sfilter() */ diff --git a/tools/h5repack/h5repack.sh.in b/tools/h5repack/h5repack.sh.in index febc063..4710a2d 100644 --- a/tools/h5repack/h5repack.sh.in +++ b/tools/h5repack/h5repack.sh.in @@ -101,6 +101,16 @@ $SRC_H5REPACK_TESTFILES/h5repack_refs.h5 $SRC_H5REPACK_TESTFILES/h5repack_shuffle.h5 $SRC_H5REPACK_TESTFILES/h5repack_soffset.h5 $SRC_H5REPACK_TESTFILES/h5repack_szip.h5 +$SRC_H5REPACK_TESTFILES/h5repack_f32le.h5 +$SRC_H5REPACK_TESTFILES/h5repack_f32le_ex.h5 +$SRC_H5REPACK_TESTFILES/h5repack_int32le_1d.h5 +$SRC_H5REPACK_TESTFILES/h5repack_int32le_1d_ex.h5 +$SRC_H5REPACK_TESTFILES/h5repack_int32le_2d.h5 +$SRC_H5REPACK_TESTFILES/h5repack_int32le_2d_ex.h5 +$SRC_H5REPACK_TESTFILES/h5repack_int32le_3d.h5 +$SRC_H5REPACK_TESTFILES/h5repack_int32le_3d_ex.h5 +$SRC_H5REPACK_TESTFILES/h5repack_uint8be.h5 +$SRC_H5REPACK_TESTFILES/h5repack_uint8be_ex.h5 $SRC_H5DIFF_TESTFILES/h5diff_attr1.h5 $SRC_TOOLS_TESTFILES/tfamily00000.h5 $SRC_TOOLS_TESTFILES/tfamily00001.h5 @@ -123,9 +133,18 @@ $SRC_H5REPACK_TESTFILES/ublock.bin $SRC_H5REPACK_TESTFILES/h5repack.info $SRC_H5REPACK_TESTFILES/crtorder.tordergr.h5.ddl $SRC_H5REPACK_TESTFILES/deflate_limit.h5repack_layout.h5.ddl +$SRC_H5REPACK_TESTFILES/h5repack_f32le_ex-0.dat +$SRC_H5REPACK_TESTFILES/h5repack_int32le_1d_ex-0.dat +$SRC_H5REPACK_TESTFILES/h5repack_int32le_1d_ex-1.dat +$SRC_H5REPACK_TESTFILES/h5repack_int32le_2d_ex-0.dat +$SRC_H5REPACK_TESTFILES/h5repack_int32le_3d_ex-0.dat $SRC_H5REPACK_TESTFILES/h5repack_layout.h5.ddl $SRC_H5REPACK_TESTFILES/h5repack_filters.h5-gzip_verbose_filters.tst $SRC_H5REPACK_TESTFILES/h5repack_layout.h5-plugin_test.ddl +$SRC_H5REPACK_TESTFILES/h5repack_uint8be_ex-0.dat +$SRC_H5REPACK_TESTFILES/h5repack_uint8be_ex-1.dat +$SRC_H5REPACK_TESTFILES/h5repack_uint8be_ex-2.dat +$SRC_H5REPACK_TESTFILES/h5repack_uint8be_ex-3.dat $SRC_H5REPACK_TESTFILES/plugin_test.h5repack_layout.h5.tst " @@ -403,8 +422,94 @@ VERIFY_LAYOUT_ALL() rm -f $layoutfile } +# ----------------------------------------------------------------------------- +# Expect h5diff to fail +# ----------------------------------------------------------------------------- +DIFFFAIL() +{ + VERIFY h5diff unequal $@ + ( + cd $TESTDIR + $RUNSERIAL $H5DIFF_BIN -q "$@" + ) + RET=$? + if [ $RET == 0 ] ; then + echo "*FAILED*" + nerrors="`expr $nerrors + 1`" + else + echo " PASSED" + fi +} + +# ----------------------------------------------------------------------------- +# Catchall test for repacking with external files +# Loops over all (internally-listed) cases and applies the given arguments +# to h5repack. +# Each test file family must be listed in the for loop at the start of the +# 'function'. +# Expects case files to be of format: +# + h5repack_<NAME>.h5 +# + h5repack_<NAME>_ex.h5 +# + h5repack_<NAME>_ex-<N>.dat +# ...where NAME is part of the internal list, and N is a positive decimal +# number; multiple external files (*.dat) are allowed per file, but they must +# follow the pattern and be in contiguous numerical sequence starting at 0. +# ----------------------------------------------------------------------------- +VERIFY_EXTERNAL_CONSOLIDATION() +{ + for name in f32le int32le_1d int32le_2d int32le_3d uint8be + do + basename="h5repack_${name}" + base_ext="${basename}_ex" + base_rpkg="${basename}_rp" + canonical="${basename}.h5" + external="${base_ext}.h5" + ex_dat="${base_ext}-0.dat" + ex_dat_mv="__${ext_dat}" + repacked="${base_rpkg}.h5" + prev_nerrors=$nerrors + + TESTING external consolidation on $name with h5repack $@ + echo " . . ." + + # baseline comparison of known files + DIFFTEST $canonical $external + + # repack the external file, verify integrity + ( cd $TESTDIR + $H5REPACK_BIN $@ $external $repacked + ) + DIFFTEST $repacked $canonical + DIFFTEST $repacked $external + + # invalidate external file by moving its first data file; verify + ( cd $TESTDIR + mv $ex_dat $ex_dat_mv + ) + DIFFFAIL $canonical $external + DIFFFAIL $repacked $external + DIFFTEST $canonical $repacked + + # reset test state for re-runs with different h5repack arguments + ( cd $TESTDIR + mv $ex_dat_mv $ex_dat + rm $repacked + ) + + # flag if any of the above checks failed + if [ $prev_nerrors != $nerrors ] + then + echo ". . . *FAILED*" + nerrors="`expr $prev_nerrors + 1`" + else + echo ". . . PASSED" + fi + done +} # end VERIFY_EXTERNAL_CONSOLIDATION + +# ----------------------------------------------------------------------------- # same as TOOLTEST, but it uses the old syntax -i input_file -o output_file -# +# ----------------------------------------------------------------------------- TOOLTEST0() { infile=$2 @@ -695,6 +800,7 @@ fi ############################################################################## ### T H E T E S T S ############################################################################## + # prepare for test COPY_TESTFILES_TO_TESTDIR @@ -1077,6 +1183,11 @@ TOOLTEST HDFFV-7840 h5diff_attr1.h5 TOOLTEST_META meta_short h5repack_layout.h5 -M 8192 TOOLTEST_META meta_long h5repack_layout.h5 --metadata_block_size=8192 +######################################## +# Testing external storage +######################################## +VERIFY_EXTERNAL_CONSOLIDATION -l CONTI + # Clean up temporary files/directories CLEAN_TESTFILES_AND_TESTDIR diff --git a/tools/h5repack/h5repack_copy.c b/tools/h5repack/h5repack_copy.c index 02a3c00..cdee6eb 100644 --- a/tools/h5repack/h5repack_copy.c +++ b/tools/h5repack/h5repack_copy.c @@ -80,8 +80,8 @@ static herr_t walk_error_callback(H5_ATTR_UNUSED unsigned n, const H5E_error2_t * -1 no *------------------------------------------------------------------------- */ - -int copy_objects(const char* fnamein, const char* fnameout, pack_opt_t *options) +int +copy_objects(const char* fnamein, const char* fnameout, pack_opt_t *options) { int ret_value = 0; hid_t fidin = -1; @@ -126,6 +126,14 @@ int copy_objects(const char* fnamein, const char* fnameout, pack_opt_t *options) HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pclose failed to close property list"); } + /* Create file access property list */ + if((fapl = H5Pcreate(H5P_FILE_ACCESS)) < 0) + HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pcreate failed to create file access property list"); + + if(options->latest) + if(H5Pset_libver_bounds(fapl, H5F_LIBVER_LATEST, H5F_LIBVER_LATEST) < 0) + HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pset_libver_bounds failed to set format version bounds"); + /* Check if we need to create a non-default file creation property list */ if (options->latest || ub_size > 0) { /* Create file creation property list */ @@ -141,8 +149,7 @@ int copy_objects(const char* fnamein, const char* fnameout, pack_opt_t *options) /* Adjust group creation parameters for root group */ /* (So that it is created in "dense storage" form) */ - if (H5Pset_link_phase_change(fcpl, (unsigned) options->grp_compact, - (unsigned) options->grp_indexed) < 0) + if (H5Pset_link_phase_change(fcpl, (unsigned) options->grp_compact, (unsigned) options->grp_indexed) < 0) HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pset_link_phase_change failed to adjust group creation parameters for root group"); for (i = 0; i < 5; i++) { @@ -187,12 +194,6 @@ int copy_objects(const char* fnamein, const char* fnameout, pack_opt_t *options) HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pset_shared_mesg_index failed to configure the specified shared object header message index"); } /* if (nindex>0) */ - /* Create file access property list */ - if ((fapl = H5Pcreate(H5P_FILE_ACCESS)) < 0) - HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pcreate failed to create file access property list"); - - if (H5Pset_libver_bounds(fapl, H5F_LIBVER_LATEST, H5F_LIBVER_LATEST) < 0) - HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pset_libver_bounds failed to set property for using latest version of the format"); } /* end if */ } /* end if */ #if defined (H5REPACK_DEBUG_USER_BLOCK) @@ -333,7 +334,7 @@ done: trav_table_free(travt); return ret_value; -} +} /* end copy_objects() */ /*------------------------------------------------------------------------- * Function: Get_hyperslab @@ -489,7 +490,7 @@ Get_hyperslab(hid_t dcpl_id, int rank_dset, hsize_t dims_dset[], done: return ret_value; -} +} /* end Get_hyperslab() */ /*------------------------------------------------------------------------- * Function: do_copy_objects @@ -545,7 +546,8 @@ done: *------------------------------------------------------------------------- */ -int do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt, +int +do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt, pack_opt_t *options) /* repack options */ { int ret_value = 0; @@ -580,7 +582,7 @@ int do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt, unsigned crt_order_flags; /* group creation order flag */ unsigned i; unsigned u; - unsigned uf; + int ifil; int is_ref = 0; htri_t is_named; hbool_t limit_maxdims; @@ -686,8 +688,8 @@ int do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt, if (options->op_tbl->objs) { for (u = 0; u < options->op_tbl->nelems; u++) { if (HDstrcmp(travt->objs[i].name, options->op_tbl->objs[u].path) == 0) - for (uf = 0; uf < options->op_tbl->objs[uf].nfilters; uf++) { - if (options->op_tbl->objs[u].filter[uf].filtn > 0) + for (ifil = 0; ifil < options->op_tbl->objs[ifil].nfilters; ifil++) { + if (options->op_tbl->objs[u].filter[ifil].filtn > 0) req_filter = 1; } } @@ -745,8 +747,6 @@ int do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt, HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dget_type failed"); if ((dcpl_in = H5Dget_create_plist(dset_in)) < 0) HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dget_create_plist failed"); - if ((dcpl_out = H5Pcopy(dcpl_in)) < 0) - HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pcopy failed"); if ((rank = H5Sget_simple_extent_ndims(f_space_id)) < 0) HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Sget_simple_extent_ndims failed"); HDmemset(dims, 0, sizeof dims); @@ -755,6 +755,19 @@ int do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt, if (H5Dget_space_status(dset_in, &space_status) < 0) HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dget_space_status failed"); + /* If the input dataset has external storage, it must be contiguous. + * Accordingly, there would be no filter or chunk properties to preserve, + * so create a new DCPL. + * Otherwise, copy dcpl_in. + */ + if (H5Pget_external_count(dcpl_in)) { + if ((dcpl_out = H5Pcreate(H5P_DATASET_CREATE)) < 0) + HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pcreate failed"); + } + else if ((dcpl_out = H5Pcopy(dcpl_in)) < 0) { + HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pcopy failed"); + } + nelmts = 1; for (j = 0; j < rank; j++) nelmts *= dims[j]; @@ -765,7 +778,7 @@ int do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt, wtype_id = H5Tget_native_type(ftype_id, H5T_DIR_DEFAULT); else wtype_id = H5Tcopy(ftype_id); - } /* end if */ + } if ((msize = H5Tget_size(wtype_id)) == 0) HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Tget_size failed"); @@ -809,7 +822,7 @@ int do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt, /* only if layout change requested for entire file or * individual obj */ - if (options->all_layout > 0 || req_obj_layout == 1) + if (options->all_layout > 0 || req_obj_layout == 1) { /*------------------------------------------------- * Unset the unlimited max dims if convert to other * than chunk layouts, because unlimited max dims @@ -836,7 +849,8 @@ int do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt, /* unset unlimited max dims */ if (limit_maxdims) H5Sset_extent_simple(f_space_id, rank, dims, NULL); - } + } /* end if not chunked */ + } /* end if layout change requested for entire file or individual object */ /*------------------------------------------------------------------------- * create the output dataset; @@ -853,7 +867,7 @@ int do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt, if ((dset_out = H5Dcreate2(fidout, travt->objs[i].name, wtype_id, f_space_id, H5P_DEFAULT, dcpl_in, H5P_DEFAULT)) < 0) HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dcreate2 failed"); apply_f = 0; - } + } /* end if retry dataset create */ /*------------------------------------------------------------------------- * read/write @@ -914,7 +928,7 @@ int do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt, dset_layout = H5Pget_layout(dcpl_out); if (dset_layout == H5D_CHUNKED) dcpl_tmp = dcpl_out; /* writing dataset */ - else { /* if reading dataset is chunked */ + else { dset_layout = H5Pget_layout(dcpl_in); if (dset_layout == H5D_CHUNKED) dcpl_tmp = dcpl_in; /* reading dataset */ @@ -925,6 +939,8 @@ int do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt, HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "Get_hyperslab failed"); hslab_buf = HDmalloc((size_t)hslab_nbytes); + if (hslab_buf == NULL) + HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "can't allocate space for hyperslab"); hslab_nelmts = hslab_nbytes / p_type_nbytes; hslab_space = H5Screate_simple(1, &hslab_nelmts, NULL); @@ -951,12 +967,12 @@ int do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt, HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Sselect_hyperslab failed"); if (H5Sselect_hyperslab(hslab_space, H5S_SELECT_SET, zero, NULL, &hs_select_nelmts, NULL) < 0) HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Sselect_hyperslab failed"); - } + } /* end if rank > 0 */ else { H5Sselect_all(f_space_id); H5Sselect_all(hslab_space); hs_select_nelmts = 1; - } /* rank */ + } /* end (else) rank == 0 */ if(H5Dread(dset_in, wtype_id, hslab_space, f_space_id, H5P_DEFAULT, hslab_buf) < 0) HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dread failed"); @@ -975,8 +991,8 @@ int do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt, hs_sel_offset[k - 1] = 0; else carry = 0; - } /* k */ - } /* elmtno */ + } + } /* end for (hyperslab selection loop) */ H5Sclose(hslab_space); /* free */ @@ -984,11 +1000,11 @@ int do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt, HDfree(hslab_buf); hslab_buf = NULL; } - } /* hyperslab read */ - } /* if (nelmts>0 && space_status==H5D_SPACE_STATUS_NOT_ALLOCATED) */ + } /* end if reading/writing by hyperslab */ + } /* end if (nelmts > 0 && space_status != H5D_SPACE_STATUS_NOT_ALLOCATED) */ /*------------------------------------------------------------------------- - * amount of compression used + * print amount of compression used *------------------------------------------------------------------------- */ if (options->verbose) { @@ -1008,14 +1024,14 @@ int do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt, print_dataset_info(dcpl_in, travt->objs[i].name, ratio, 0); /* print a message that the filter was not applied - (in case there was a filter) + * (in case there was a filter) */ if (has_filter && apply_s == 0) HDprintf(" <warning: filter not applied to %s. dataset smaller than %d bytes>\n", travt->objs[i].name, (int) options->min_comp); if (has_filter && apply_f == 0) HDprintf(" <warning: could not apply the filter to %s>\n", travt->objs[i].name); - } /* verbose */ + } /* end if verbose (print compression) */ /*------------------------------------------------------------------------- * copy attrs @@ -1027,11 +1043,11 @@ int do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt, /*close */ if (H5Dclose(dset_out) < 0) HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dclose failed"); - }/*!H5T_REFERENCE*/ - }/*h5tools_canreadf*/ + } /* end if not a reference */ + } /* end if h5tools_canreadf (filter availability check) */ /*------------------------------------------------------------------------- - * close + * Close *------------------------------------------------------------------------- */ if (H5Tclose(ftype_id) < 0) @@ -1048,7 +1064,7 @@ int do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt, HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dclose failed"); } /*------------------------------------------------------------------------- - * we do not have request for filter/chunking use H5Ocopy instead + * We do not have request for filter/chunking; use H5Ocopy instead *------------------------------------------------------------------------- */ else { @@ -1080,7 +1096,7 @@ int do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt, HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pclose failed"); /*------------------------------------------------------------------------- - * copy attrs manually + * Copy attrs manually *------------------------------------------------------------------------- */ if ((dset_in = H5Dopen2(fidin, travt->objs[i].name, H5P_DEFAULT)) < 0) @@ -1097,7 +1113,7 @@ int do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt, if (options->verbose) HDprintf(FORMAT_OBJ, "dset", travt->objs[i].name); - } /* end do we have request for filter/chunking */ + } /* end whether we have request for filter/chunking */ break; /*------------------------------------------------------------------------- @@ -1157,8 +1173,8 @@ int do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt, default: HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "Object type not found"); } /* switch */ - } /* end for */ - } /* end if */ + } /* end for each object to traverse */ + } /* end if there are objects */ done: @@ -1196,7 +1212,7 @@ done: HDfree(hslab_buf); return ret_value; -} +} /* end do_copy_objects() */ /*------------------------------------------------------------------------- * Function: print_dataset_info @@ -1290,8 +1306,8 @@ print_dataset_info(hid_t dcpl_id, char *objname, double ratio, int pr) default: HDstrcat(strfilter, "UD "); break; - } /* switch */ - }/*i*/ + } /* end switch */ + } /* end for each filter */ if (!pr) HDprintf(FORMAT_OBJ, "dset", objname); @@ -1304,7 +1320,7 @@ print_dataset_info(hid_t dcpl_id, char *objname, double ratio, int pr) HDstrcat(str, temp); HDprintf(FORMAT_OBJ, str, objname); } -} +} /* end print_dataset_info() */ /*------------------------------------------------------------------------- * Function: copy_user_block @@ -1374,7 +1390,7 @@ done: HDclose(outfid); return ret_value; -} +} /* end copy_user_block() */ /*------------------------------------------------------------------------- * Function: print_user_block @@ -1447,6 +1463,6 @@ done: HDclose(fh); return; -} +} /* end print_user_block() */ #endif diff --git a/tools/h5repack/h5repack_main.c b/tools/h5repack/h5repack_main.c index 9c96e56..bc6a097 100644 --- a/tools/h5repack/h5repack_main.c +++ b/tools/h5repack/h5repack_main.c @@ -23,7 +23,8 @@ static void leave(int ret) H5_ATTR_NORETURN; /* module-scoped variables */ -static int has_i_o = 0; +static int has_i = 0; +static int has_o = 0; const char *infile = NULL; const char *outfile = NULL; @@ -33,28 +34,28 @@ const char *outfile = NULL; */ static const char *s_opts = "hVvf:l:m:e:nLc:d:s:u:b:M:t:a:i:o:q:z:E"; static struct long_options l_opts[] = { - { "help", no_arg, 'h' }, - { "version", no_arg, 'V' }, - { "verbose", no_arg, 'v' }, - { "filter", require_arg, 'f' }, - { "layout", require_arg, 'l' }, - { "minimum", require_arg, 'm' }, - { "file", require_arg, 'e' }, - { "native", no_arg, 'n' }, - { "latest", no_arg, 'L' }, - { "compact", require_arg, 'c' }, - { "indexed", require_arg, 'd' }, - { "ssize", require_arg, 's' }, - { "ublock", require_arg, 'u' }, - { "block", require_arg, 'b' }, + { "help", no_arg, 'h' }, + { "version", no_arg, 'V' }, + { "verbose", no_arg, 'v' }, + { "filter", require_arg, 'f' }, + { "layout", require_arg, 'l' }, + { "minimum", require_arg, 'm' }, + { "file", require_arg, 'e' }, + { "native", no_arg, 'n' }, + { "latest", no_arg, 'L' }, + { "compact", require_arg, 'c' }, + { "indexed", require_arg, 'd' }, + { "ssize", require_arg, 's' }, + { "ublock", require_arg, 'u' }, + { "block", require_arg, 'b' }, { "metadata_block_size", require_arg, 'M' }, - { "threshold", require_arg, 't' }, - { "alignment", require_arg, 'a' }, - { "infile", require_arg, 'i' }, /* -i for backward compability */ - { "outfile", require_arg, 'o' }, /* -o for backward compability */ - { "sort_by", require_arg, 'q' }, - { "sort_order", require_arg, 'z' }, - { "enable-error-stack", no_arg, 'E' }, + { "threshold", require_arg, 't' }, + { "alignment", require_arg, 'a' }, + { "infile", require_arg, 'i' }, /* for backward compability */ + { "outfile", require_arg, 'o' }, /* for backward compability */ + { "sort_by", require_arg, 'q' }, + { "sort_order", require_arg, 'z' }, + { "enable-error-stack", no_arg, 'E' }, { NULL, 0, '\0' } }; @@ -77,7 +78,8 @@ static void usage(const char *prog) { PRINTVALSTREAM(rawoutstream, " -v, --verbose Verbose mode, print object information\n"); PRINTVALSTREAM(rawoutstream, " -V, --version Print version number and exit\n"); PRINTVALSTREAM(rawoutstream, " -n, --native Use a native HDF5 type when repacking\n"); - PRINTVALSTREAM(rawoutstream, " --enable-error-stack Prints messages from the HDF5 error stack as they occur\n"); + PRINTVALSTREAM(rawoutstream, " --enable-error-stack Prints messages from the HDF5 error stack as they\n"); + PRINTVALSTREAM(rawoutstream, " occur\n"); PRINTVALSTREAM(rawoutstream, " -L, --latest Use latest version of file format\n"); PRINTVALSTREAM(rawoutstream, " -c L1, --compact=L1 Maximum number of links in header messages\n"); PRINTVALSTREAM(rawoutstream, " -d L2, --indexed=L2 Minimum number of links in the indexed format\n"); @@ -100,8 +102,10 @@ static void usage(const char *prog) { PRINTVALSTREAM(rawoutstream, " U - is a filename.\n"); PRINTVALSTREAM(rawoutstream, " T - is an integer\n"); PRINTVALSTREAM(rawoutstream, " A - is an integer greater than zero\n"); - PRINTVALSTREAM(rawoutstream, " Q - is the sort index type for the input file. It can be \"name\" or \"creation_order\" (default)\n"); - PRINTVALSTREAM(rawoutstream, " Z - is the sort order type for the input file. It can be \"descending\" or \"ascending\" (default)\n"); + PRINTVALSTREAM(rawoutstream, " Q - is the sort index type for the input file. It can be \"name\" or\n"); + PRINTVALSTREAM(rawoutstream, " \"creation_order\" (default)\n"); + PRINTVALSTREAM(rawoutstream, " Z - is the sort order type for the input file. It can be \"descending\" or\n"); + PRINTVALSTREAM(rawoutstream, " \"ascending\" (default)\n"); PRINTVALSTREAM(rawoutstream, " B - is the user block size, any value that is 512 or greater and is\n"); PRINTVALSTREAM(rawoutstream, " a power of 2 (1024 default)\n"); PRINTVALSTREAM(rawoutstream, " F - is the shared object header message type, any of <dspace|dtype|fill|\n"); @@ -132,9 +136,9 @@ static void usage(const char *prog) { PRINTVALSTREAM(rawoutstream, " NBIT (no parameter)\n"); PRINTVALSTREAM(rawoutstream, " SOFF=<scale_factor,scale_type> scale_factor is an integer and scale_type\n"); PRINTVALSTREAM(rawoutstream, " is either IN or DS\n"); - PRINTVALSTREAM(rawoutstream, " UD=<filter_number,filter_flag,cd_value_count,value_1[,value_2,...,value_N]>\n"); - PRINTVALSTREAM(rawoutstream, " required values for filter_number,filter_flag,cd_value_count,value_1\n"); - PRINTVALSTREAM(rawoutstream, " optional values for value_2 to value_N\n"); + PRINTVALSTREAM(rawoutstream, " UD=<filter_number,filter_flag,cd_value_count,value1[,value2,...,valueN]>\n"); + PRINTVALSTREAM(rawoutstream, " Required values: filter_number, filter_flag, cd_value_count, value1\n"); + PRINTVALSTREAM(rawoutstream, " Optional values: value2 to valueN\n"); PRINTVALSTREAM(rawoutstream, " NONE (no parameter)\n"); PRINTVALSTREAM(rawoutstream, "\n"); PRINTVALSTREAM(rawoutstream, " LAYT - is a string with the format:\n"); @@ -171,7 +175,7 @@ static void usage(const char *prog) { PRINTVALSTREAM(rawoutstream, "4) h5repack -L -c 10 -s 20:dtype file1 file2\n"); PRINTVALSTREAM(rawoutstream, "\n"); PRINTVALSTREAM(rawoutstream, " Using latest file format with maximum compact group size of 10 and\n"); - PRINTVALSTREAM(rawoutstream, " and minimum shared datatype size of 20\n"); + PRINTVALSTREAM(rawoutstream, " minimum shared datatype size of 20\n"); PRINTVALSTREAM(rawoutstream, "\n"); PRINTVALSTREAM(rawoutstream, "5) h5repack -f SHUF -f GZIP=1 file1 file2\n"); PRINTVALSTREAM(rawoutstream, "\n"); @@ -215,7 +219,7 @@ int read_info(const char *filename, pack_opt_t *options) int i, rc = 1; int ret_value = EXIT_SUCCESS; - if ((fp = HDfopen(filename, "r")) == (FILE *) NULL) { + if (NULL == (fp = HDfopen(filename, "r"))) { error_msg("cannot open options file %s\n", filename); h5tools_setstatus(EXIT_FAILURE); ret_value = EXIT_FAILURE; @@ -224,90 +228,46 @@ int read_info(const char *filename, pack_opt_t *options) /* cycle until end of file reached */ while (1) { - rc = fscanf(fp, "%s", stype); - if (rc == -1) - break; - - /*------------------------------------------------------------------------- - * filter - *------------------------------------------------------------------------- - */ - if (HDstrcmp(stype,"-f") == 0) { - /* find begining of info */ - i = 0; - c = '0'; - while (c != ' ') { - if(fscanf(fp, "%c", &c) < 0 && HDferror(fp)) { - error_msg("fscanf error\n"); - h5tools_setstatus(EXIT_FAILURE); - ret_value = EXIT_FAILURE; - goto done; - } /* end if */ - if (HDfeof(fp)) - break; - } - c = '0'; - /* go until end */ - while (c != ' ') { - if(fscanf(fp, "%c", &c) < 0 && HDferror(fp)) { - error_msg("fscanf error\n"); - h5tools_setstatus(EXIT_FAILURE); - ret_value = EXIT_FAILURE; - goto done; - } /* end if */ - comp_info[i] = c; - i++; - if (HDfeof(fp)) - break; - if (c == 10 /*eol*/) - break; - } - comp_info[i - 1] = '\0'; /*cut the last " */ - if (h5repack_addfilter(comp_info, options) == -1) { - error_msg("could not add compression option\n"); + /* Info indicator must be for layout or filter */ + if (HDstrcmp(stype,"-l") && HDstrcmp(stype, "-f")) { + error_msg("bad file format for %s", filename); + h5tools_setstatus(EXIT_FAILURE); + ret_value = EXIT_FAILURE; + goto done; + } + + /* find begining of info */ + i = 0; + c = '0'; + while (c != ' ') { + if (fscanf(fp, "%c", &c) < 0 && HDferror(fp)) { + error_msg("fscanf error\n"); h5tools_setstatus(EXIT_FAILURE); ret_value = EXIT_FAILURE; goto done; } + if (HDfeof(fp)) + break; } - /*------------------------------------------------------------------------- - * layout - *------------------------------------------------------------------------- - */ - else if (HDstrcmp(stype,"-l") == 0) { - - /* find begining of info */ - i = 0; - c = '0'; - while (c != ' ') { - if(fscanf(fp, "%c", &c) < 0 && HDferror(fp)) { - error_msg("fscanf error\n"); - h5tools_setstatus(EXIT_FAILURE); - ret_value = EXIT_FAILURE; - goto done; - } /* end if */ - if (HDfeof(fp)) - break; - } - c = '0'; - /* go until end */ - while (c != ' ') { - if(fscanf(fp, "%c", &c) < 0 && HDferror(fp)) { - error_msg("fscanf error\n"); - h5tools_setstatus(EXIT_FAILURE); - ret_value = EXIT_FAILURE; - goto done; - } /* end if */ - comp_info[i] = c; - i++; - if (HDfeof(fp)) - break; - if (c == 10 /*eol*/) - break; + c = '0'; + /* go until end */ + while (c != ' ') { + if (fscanf(fp, "%c", &c) < 0 && HDferror(fp)) { + error_msg("fscanf error\n"); + h5tools_setstatus(EXIT_FAILURE); + ret_value = EXIT_FAILURE; + goto done; } - comp_info[i - 1] = '\0'; /*cut the last " */ + comp_info[i++] = c; + if (HDfeof(fp)) + break; + if (c == 10 /*eol*/) + break; + } + comp_info[i - 1] = '\0'; /*cut the last " */ + if (!HDstrcmp(stype, "-l")) { if (h5repack_addlayout(comp_info, options) == -1) { error_msg("could not add chunck option\n"); h5tools_setstatus(EXIT_FAILURE); @@ -315,17 +275,15 @@ int read_info(const char *filename, pack_opt_t *options) goto done; } } - /*------------------------------------------------------------------------- - * not valid - *------------------------------------------------------------------------- - */ else { - error_msg("bad file format for %s", filename); - h5tools_setstatus(EXIT_FAILURE); - ret_value = EXIT_FAILURE; - goto done; + if (h5repack_addfilter(comp_info, options) == -1) { + error_msg("could not add compression option\n"); + h5tools_setstatus(EXIT_FAILURE); + ret_value = EXIT_FAILURE; + goto done; + } } - } + } /* end while info-read cycling */ done: if (fp) @@ -349,9 +307,9 @@ set_sort_by(const char *form) { H5_index_t idx_type = H5_INDEX_UNKNOWN; - if (HDstrcmp(form,"name")==0) /* H5_INDEX_NAME */ + if (!HDstrcmp(form, "name")) idx_type = H5_INDEX_NAME; - else if (HDstrcmp(form,"creation_order")==0) /* H5_INDEX_CRT_ORDER */ + else if (!HDstrcmp(form, "creation_order")) idx_type = H5_INDEX_CRT_ORDER; return idx_type; @@ -372,9 +330,9 @@ set_sort_order(const char *form) { H5_iter_order_t iter_order = H5_ITER_UNKNOWN; - if (HDstrcmp(form,"ascending")==0) /* H5_ITER_INC */ + if (!HDstrcmp(form, "ascending")) iter_order = H5_ITER_INC; - else if (HDstrcmp(form,"descending")==0) /* H5_ITER_DEC */ + else if (!HDstrcmp(form, "descending")) iter_order = H5_ITER_DEC; return iter_order; @@ -393,19 +351,19 @@ int parse_command_line(int argc, const char **argv, pack_opt_t* options) int ret_value = 0; /* parse command line options */ - while ((opt = get_option(argc, argv, s_opts, l_opts)) != EOF) { + while (EOF != (opt = get_option(argc, argv, s_opts, l_opts))) { switch ((char) opt) { /* -i for backward compatibility */ case 'i': infile = opt_arg; - has_i_o = 1; + has_i++; break; /* -o for backward compatibility */ case 'o': outfile = opt_arg; - has_i_o = 1; + has_o++; break; case 'h': @@ -484,10 +442,10 @@ int parse_command_line(int argc, const char **argv, pack_opt_t* options) { int idx = 0; int ssize = 0; - char *msgPtr = HDstrchr( opt_arg, ':'); + char *msgPtr = HDstrchr(opt_arg, ':'); options->latest = TRUE; /* must use latest format */ if (msgPtr == NULL) { - ssize = HDatoi( opt_arg ); + ssize = HDatoi(opt_arg); for (idx = 0; idx < 5; idx++) options->msg_size[idx] = ssize; } @@ -497,15 +455,15 @@ int parse_command_line(int argc, const char **argv, pack_opt_t* options) HDstrcpy(msgType, msgPtr + 1); msgPtr[0] = '\0'; ssize = HDatoi( opt_arg ); - if (HDstrncmp(msgType, "dspace",6) == 0) + if (!HDstrncmp(msgType, "dspace", 6)) options->msg_size[0] = ssize; - else if (HDstrncmp(msgType, "dtype", 5) == 0) + else if (!HDstrncmp(msgType, "dtype", 5)) options->msg_size[1] = ssize; - else if (HDstrncmp(msgType, "fill", 4) == 0) + else if (!HDstrncmp(msgType, "fill", 4)) options->msg_size[2] = ssize; - else if (HDstrncmp(msgType, "pline", 5) == 0) + else if (!HDstrncmp(msgType, "pline", 5)) options->msg_size[3] = ssize; - else if (HDstrncmp(msgType, "attr", 4) == 0) + else if (!HDstrncmp(msgType, "attr", 4)) options->msg_size[4] = ssize; } } @@ -538,7 +496,7 @@ int parse_command_line(int argc, const char **argv, pack_opt_t* options) break; case 'q': - if((sort_by = set_sort_by(opt_arg)) < 0) { + if (H5_INDEX_UNKNOWN == set_sort_by(opt_arg)) { error_msg(" failed to set sort by form <%s>\n", opt_arg); h5tools_setstatus(EXIT_FAILURE); ret_value = -1; @@ -547,7 +505,7 @@ int parse_command_line(int argc, const char **argv, pack_opt_t* options) break; case 'z': - if((sort_order = set_sort_order(opt_arg)) < 0) { + if (set_sort_order(opt_arg) == H5_ITER_UNKNOWN) { error_msg(" failed to set sort order form <%s>\n", opt_arg); h5tools_setstatus(EXIT_FAILURE); ret_value = -1; @@ -561,18 +519,35 @@ int parse_command_line(int argc, const char **argv, pack_opt_t* options) default: break; - } /* switch */ - } /* while */ - - if (has_i_o == 0) { - /* check for file names to be processed */ - if (argc <= opt_ind || argv[opt_ind + 1] == NULL) { - error_msg("missing file names\n"); - usage(h5tools_getprogname()); - h5tools_setstatus(EXIT_FAILURE); - ret_value = -1; - } - } + } /* end switch */ + } /* end while there are more options to parse */ + + /* If neither -i nor -o given, get in and out files positionally */ + if (0 == (has_i + has_o)) { + if (argv[opt_ind] != NULL && argv[opt_ind + 1] != NULL) { + infile = argv[opt_ind]; + outfile = argv[opt_ind + 1]; + + if (!HDstrcmp(infile, outfile)) { + error_msg("file names cannot be the same\n"); + usage(h5tools_getprogname()); + h5tools_setstatus(EXIT_FAILURE); + ret_value = -1; + } + } + else { + error_msg("file names missing\n"); + usage(h5tools_getprogname()); + h5tools_setstatus(EXIT_FAILURE); + ret_value = -1; + } + } + else if (has_i != 1 || has_o != 1) { + error_msg("filenames must be either both -i -o or both positional\n"); + usage(h5tools_getprogname()); + h5tools_setstatus(EXIT_FAILURE); + ret_value = -1; + } done: return ret_value; @@ -629,28 +604,6 @@ int main(int argc, const char **argv) if (parse_command_line(argc, argv, &options) < 0) goto done; - /* get file names if they were not yet got */ - if (has_i_o == 0) { - - if (argv[opt_ind] != NULL && argv[opt_ind + 1] != NULL) { - infile = argv[opt_ind]; - outfile = argv[opt_ind + 1]; - - if ( HDstrcmp( infile, outfile ) == 0) { - error_msg("file names cannot be the same\n"); - usage(h5tools_getprogname()); - h5tools_setstatus(EXIT_FAILURE); - goto done; - } - } - else { - error_msg("file names missing\n"); - usage(h5tools_getprogname()); - h5tools_setstatus(EXIT_FAILURE); - goto done; - } - } - if (enable_error_stack > 0) { H5Eset_auto2(H5E_DEFAULT, func, edata); H5Eset_auto2(H5tools_ERR_STACK_g, tools_func, tools_edata); diff --git a/tools/h5repack/h5repackgentest.c b/tools/h5repack/h5repackgentest.c new file mode 100644 index 0000000..12883b7 --- /dev/null +++ b/tools/h5repack/h5repackgentest.c @@ -0,0 +1,413 @@ +/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * + * Copyright by The HDF Group. * + * Copyright by the Board of Trustees of the University of Illinois. * + * All rights reserved. * + * * + * This file is part of HDF5. The full HDF5 copyright notice, including * + * terms governing use, modification, and redistribution, is contained in * + * the COPYING file, which can be found at the root of the source code * + * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * If you do not have access to either file, you may request a copy from * + * help@hdfgroup.org. * + * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ + +/* For generating files for verifying h5repack with external storage. . . + * + * Each case file should follow the format of: + * + h5repack_<NAME>.h5 + * + h5repack_<NAME>_ex.h5 + * + h5repack_<NAME>_ex-<N>.dat + * ...where NAME idenfities the type, and N is a positive decimal number; + * multiple external files (*.dat) are allowed per file, but they must + * follow the pattern and be in contiguous numerical sequence starting at 0. + * + * Each file typename must be added to the listing for + * `VERIFY_EXTERNAL_CONSOLIDATION` in h5repack.sh + * + * There is no restriction on the name, number, or structure of datasets and + * groups in HDF5 file. + * + * The inluded datatypes should be more than adequate to verify the correctness + * of the behavior -- if one type can be consolidated from external storage, + * then thay all can. + */ + +#include "hdf5.h" +#include "H5private.h" + +#define MAX_NAME_SIZE 256 +#define FILE_INT32LE_1 "h5repack_int32le_1d" +#define FILE_INT32LE_2 "h5repack_int32le_2d" +#define FILE_INT32LE_3 "h5repack_int32le_3d" +#define FILE_UINT8BE "h5repack_uint8be" +#define FILE_F32LE "h5repack_f32le" + +#define H5REPACKGENTEST_OOPS ret_value = -1; goto done; + +#define H5REPACKGENTEST_COMMON_CLEANUP(dcpl, file, space) { \ + if ((dcpl) != H5P_DEFAULT && (dcpl) != H5I_INVALID_HID) { \ + (void)H5Pclose((dcpl)); \ + } \ + if ((file) != H5I_INVALID_HID) { (void)H5Fclose((file)); } \ + if ((space) != H5I_INVALID_HID) { (void)H5Sclose((space)); } \ +} + +struct external_def { + hsize_t type_size; + unsigned n_elts_per_file; + unsigned n_elts_total; +}; + + +/* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - + * Helper function to create and write a dataset to file. + * Returns 0 on success, -1 on failure. + */ +static int +__make_dataset( + hid_t file_id, + const char *dset_name, + hid_t mem_type_id, + hid_t space_id, + hid_t dcpl_id, + void *wdata) +{ + hid_t dset_id = H5I_INVALID_HID; + int ret_value = 0; + + dset_id = H5Dcreate2( + file_id, + dset_name, + mem_type_id, + space_id, + H5P_DEFAULT, + dcpl_id, + H5P_DEFAULT); + if (dset_id == H5I_INVALID_HID) { + H5REPACKGENTEST_OOPS; + } + + if (H5Dwrite( + dset_id, + mem_type_id, + H5S_ALL, + H5S_ALL, + H5P_DEFAULT, + wdata) + < 0) + { + H5REPACKGENTEST_OOPS; + } + +done: + if (dset_id != H5I_INVALID_HID) { (void)H5Dclose(dset_id); } + return ret_value; +} /* end __make_dataset() */ + + +/* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - + * Helper function to populate the DCPL external storage list. + * Creates external files for the DCPL, with each file name following the + * convention "<filename>_ex-<num>.dat". Will append `n_external_files` to + * the filename list, with each file having space for `n_elts` items of the + * type (of size `elt_size`). The numeric inputs are not sanity-checked. + * Returns 0 on success, -1 on failure. + */ +static int +__set_dcpl_external_list( + hid_t dcpl, + const char *filename, + unsigned n_elts_per_file, + unsigned n_elts_total, + hsize_t elt_size) +{ + char name[MAX_NAME_SIZE]; + unsigned n_external_files = 0; + unsigned i = 0; + + if (NULL == filename || '\0' == *filename) { + return -1; + } + + n_external_files = n_elts_total / n_elts_per_file; + if (n_elts_total != (n_external_files * n_elts_per_file)) { + return -1; + } + + for (i = 0; i < n_external_files; i++) { + if (snprintf(name, MAX_NAME_SIZE, "%s_ex-%u.dat", filename, i) >= MAX_NAME_SIZE) { + return -1; + } + if (H5Pset_external(dcpl, name, 0, n_elts_per_file * elt_size) < 0) { + return -1; + } + } + return 0; +} /* end __set_dcpl_external_list() */ + + +/* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - + * Generalized utility function to write a file with the specified data and + * dataset configuration. If `ext` is provided, will attempt to use external + * storage. + * Returns 0 on success, -1 on failure. + */ +static int +__make_file( + const char *basename, + struct external_def *ext, + hid_t type_id, + hsize_t rank, + hsize_t *dims, + void *wdata) +{ + char filename[MAX_NAME_SIZE]; + hid_t file_id = H5I_INVALID_HID; + hid_t dcpl_id = H5P_DEFAULT; + hid_t space_id = H5I_INVALID_HID; + int ret_value = 0; + + if (snprintf(filename, + MAX_NAME_SIZE, + "%s%s.h5", + basename, + (NULL != ext) ? "_ex" : "") + >= MAX_NAME_SIZE) + { + H5REPACKGENTEST_OOPS; + } + + if (NULL != ext) { + dcpl_id = H5Pcreate(H5P_DATASET_CREATE); + if (dcpl_id == H5I_INVALID_HID) { + H5REPACKGENTEST_OOPS; + } + if (__set_dcpl_external_list( + dcpl_id, + basename, + ext->n_elts_per_file, + ext->n_elts_total, + ext->type_size) + < 0) + { + H5REPACKGENTEST_OOPS; + } + } + + space_id = H5Screate_simple(rank, dims, NULL); + if (space_id == H5I_INVALID_HID) { + H5REPACKGENTEST_OOPS; + } + + file_id = H5Fcreate(filename, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT); + if (file_id == H5I_INVALID_HID) { + H5REPACKGENTEST_OOPS; + } + + if (__make_dataset( + file_id, + "dset", + type_id, + space_id, + dcpl_id, + wdata) + < 0) + { + H5REPACKGENTEST_OOPS; + } + +done: + H5REPACKGENTEST_COMMON_CLEANUP(dcpl_id, file_id, space_id); + return ret_value; +} /* end __make_file() */ + + +/* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - + * Returns 0 on success, -1 on failure. + */ +static int +generate_int32le_1d(hbool_t external) +{ + int32_t wdata[12]; + hsize_t dims[] = {12}; + struct external_def *def_ptr = NULL; + struct external_def def = { (hsize_t)sizeof(int32_t), 6, 12 }; + int32_t n = 0; + int ret_value = 0; + + /* Generate values + */ + for (n = 0; n < 12; n++) { + wdata[n] = n-6; + } + + def_ptr = (TRUE == external) ? (&def) : NULL; + if (__make_file(FILE_INT32LE_1, def_ptr, H5T_STD_I32LE, 1, dims, wdata) < 0) { + ret_value = -1; + } + + return ret_value; +} /* end generate_int32le_1d() */ + + +/* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - + * Returns 0 on success, -1 on failure. + */ +static int +generate_int32le_2d(hbool_t external) +{ + int32_t wdata[64]; + hsize_t dims[] = {8, 8}; + struct external_def *def_ptr = NULL; + struct external_def def = { (hsize_t)sizeof(int32_t), 64, 64 }; + int32_t n = 0; + int ret_value = 0; + + /* Generate values + */ + for (n = 0; n < 64; n++) { + wdata[n] = n-32; + } + + def_ptr = (TRUE == external) ? (&def) : NULL; + if (__make_file(FILE_INT32LE_2, def_ptr, H5T_STD_I32LE, 2, dims, wdata) < 0) { + ret_value = -1; + } + + return ret_value; +} /* end generate_int32le_2d() */ + + +/* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - + * Returns 0 on success, -1 on failure. + */ +static int +generate_int32le_3d(hbool_t external) +{ + hsize_t dims[] = {8, 8, 8}; + int32_t wdata[512]; /* 8^3, from dims */ + struct external_def *def_ptr = NULL; + struct external_def def = { (hsize_t)sizeof(int32_t), 512, 512 }; + int32_t n = 0; + int i = 0; + int j = 0; + int k = 0; + int ret_value = 0; + + /* generate values, alternating positive and negative + */ + for (i=0, n=0; i < dims[0]; i++) { + for (j=0; j < dims[1]; j++) { + for (k=0; k < dims[2]; k++, n++) { + wdata[n] = (k + j*512 + i*4096) * ((n&1) ? (-1) : (1)); + } + } + } + + def_ptr = (TRUE == external) ? (&def) : NULL; + if (__make_file(FILE_INT32LE_3, def_ptr, H5T_STD_I32LE, 3, dims, wdata) < 0) { + ret_value = -1; + } + + return ret_value; +} /* end generate_int32le_3d() */ + + +/* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - + * Returns 0 on success, -1 on failure. + */ +static int +generate_uint8be(hbool_t external) +{ + hsize_t dims[] = {4, 8, 8}; + uint8_t wdata[256]; /* 4*8*8, from dims */ + struct external_def *def_ptr = NULL; + struct external_def def = { (hsize_t)sizeof(uint8_t), 64, 256 }; + uint8_t n = 0; + int i = 0; + int j = 0; + int k = 0; + int ret_value = 0; + + /* Generate values, ping-pong from ends of range + */ + for (i=0, n=0; i < dims[0]; i++) { + for (j=0; j < dims[1]; j++) { + for (k=0; k < dims[2]; k++, n++) { + wdata[n] = n * ((n&1) ? (-1) : (1)); + } + } + } + + def_ptr = (TRUE == external) ? (&def) : NULL; + if (__make_file(FILE_UINT8BE, def_ptr, H5T_STD_U8BE, 3, dims, wdata) < 0) { + ret_value = -1; + } + + return ret_value; +} /* end generate_uint8be() */ + + +/* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - + * Returns 0 on success, -1 on failure. + */ +static int +generate_f32le(hbool_t external) +{ + hsize_t dims[] = {12, 6}; + float wdata[72]; /* 12*6, from dims */ + struct external_def *def_ptr = NULL; + struct external_def def = { + (hsize_t)sizeof(float), + 72, + 72 + }; + float n = 0; + int i = 0; + int j = 0; + int k = 0; + int ret_value = 0; + + /* Generate values */ + for (i=0, k=0, n=0; i < dims[0]; i++) { + for (j=0; j < dims[1]; j++, k++, n++) { + wdata[k] = n * 801.1 * ((k % 5 == 1) ? (-1) : (1)); + } + } + + def_ptr = (TRUE == external) ? (&def) : NULL; + if (__make_file(FILE_F32LE, def_ptr, H5T_IEEE_F32LE, 2, dims, wdata) < 0) { + ret_value = -1; + } + + return ret_value; +} /* end generate_f32le() */ + + +/* ---------------------------------------------------------------------------- + * Create files. + * Return 0 on success, nonzero on failure. + */ +int +main(void) +{ + int i = 0; + int ret_value = 0; + + for (i=0; i < 2; i++) { + hbool_t external = (i&1) ? TRUE : FALSE; + if (ret_value == 0) { ret_value -= generate_int32le_1d(external); } + if (ret_value == 0) { ret_value -= generate_int32le_2d(external); } + if (ret_value == 0) { ret_value -= generate_int32le_3d(external); } + if (ret_value == 0) { ret_value -= generate_uint8be(external); } + if (ret_value == 0) { ret_value -= generate_f32le(external); } + } /* end for external data storage or not */ + + if (ret_value != 0) { + HDprintf("A problem occurred!\n"); + } + + return ret_value; +} /* end main() */ + + diff --git a/tools/h5repack/testfiles/h5repack-help.txt b/tools/h5repack/testfiles/h5repack-help.txt index 8161157..05b8b21 100644 --- a/tools/h5repack/testfiles/h5repack-help.txt +++ b/tools/h5repack/testfiles/h5repack-help.txt @@ -6,7 +6,8 @@ usage: h5repack [OPTIONS] file1 file2 -v, --verbose Verbose mode, print object information -V, --version Print version number and exit -n, --native Use a native HDF5 type when repacking - --enable-error-stack Prints messages from the HDF5 error stack as they occur + --enable-error-stack Prints messages from the HDF5 error stack as they + occur -L, --latest Use latest version of file format -c L1, --compact=L1 Maximum number of links in header messages -d L2, --indexed=L2 Minimum number of links in the indexed format @@ -29,8 +30,10 @@ usage: h5repack [OPTIONS] file1 file2 U - is a filename. T - is an integer A - is an integer greater than zero - Q - is the sort index type for the input file. It can be "name" or "creation_order" (default) - Z - is the sort order type for the input file. It can be "descending" or "ascending" (default) + Q - is the sort index type for the input file. It can be "name" or + "creation_order" (default) + Z - is the sort order type for the input file. It can be "descending" or + "ascending" (default) B - is the user block size, any value that is 512 or greater and is a power of 2 (1024 default) F - is the shared object header message type, any of <dspace|dtype|fill| @@ -61,9 +64,9 @@ usage: h5repack [OPTIONS] file1 file2 NBIT (no parameter) SOFF=<scale_factor,scale_type> scale_factor is an integer and scale_type is either IN or DS - UD=<filter_number,filter_flag,cd_value_count,value_1[,value_2,...,value_N]> - required values for filter_number,filter_flag,cd_value_count,value_1 - optional values for value_2 to value_N + UD=<filter_number,filter_flag,cd_value_count,value1[,value2,...,valueN]> + Required values: filter_number, filter_flag, cd_value_count, value1 + Optional values: value2 to valueN NONE (no parameter) LAYT - is a string with the format: @@ -100,7 +103,7 @@ Examples of use: 4) h5repack -L -c 10 -s 20:dtype file1 file2 Using latest file format with maximum compact group size of 10 and - and minimum shared datatype size of 20 + minimum shared datatype size of 20 5) h5repack -f SHUF -f GZIP=1 file1 file2 diff --git a/tools/h5repack/testfiles/h5repack_f32le.h5 b/tools/h5repack/testfiles/h5repack_f32le.h5 Binary files differnew file mode 100644 index 0000000..03a9b57 --- /dev/null +++ b/tools/h5repack/testfiles/h5repack_f32le.h5 diff --git a/tools/h5repack/testfiles/h5repack_f32le_ex-0.dat b/tools/h5repack/testfiles/h5repack_f32le_ex-0.dat Binary files differnew file mode 100644 index 0000000..8378fc2 --- /dev/null +++ b/tools/h5repack/testfiles/h5repack_f32le_ex-0.dat diff --git a/tools/h5repack/testfiles/h5repack_f32le_ex.h5 b/tools/h5repack/testfiles/h5repack_f32le_ex.h5 Binary files differnew file mode 100644 index 0000000..ca6c49d --- /dev/null +++ b/tools/h5repack/testfiles/h5repack_f32le_ex.h5 diff --git a/tools/h5repack/testfiles/h5repack_int32le_1d.h5 b/tools/h5repack/testfiles/h5repack_int32le_1d.h5 Binary files differnew file mode 100644 index 0000000..7d60566 --- /dev/null +++ b/tools/h5repack/testfiles/h5repack_int32le_1d.h5 diff --git a/tools/h5repack/testfiles/h5repack_int32le_1d_ex-0.dat b/tools/h5repack/testfiles/h5repack_int32le_1d_ex-0.dat new file mode 100644 index 0000000..f75ada5 --- /dev/null +++ b/tools/h5repack/testfiles/h5repack_int32le_1d_ex-0.dat @@ -0,0 +1 @@ +
\ No newline at end of file diff --git a/tools/h5repack/testfiles/h5repack_int32le_1d_ex-1.dat b/tools/h5repack/testfiles/h5repack_int32le_1d_ex-1.dat Binary files differnew file mode 100644 index 0000000..1f8f3b6 --- /dev/null +++ b/tools/h5repack/testfiles/h5repack_int32le_1d_ex-1.dat diff --git a/tools/h5repack/testfiles/h5repack_int32le_1d_ex.h5 b/tools/h5repack/testfiles/h5repack_int32le_1d_ex.h5 Binary files differnew file mode 100644 index 0000000..ba4b534 --- /dev/null +++ b/tools/h5repack/testfiles/h5repack_int32le_1d_ex.h5 diff --git a/tools/h5repack/testfiles/h5repack_int32le_2d.h5 b/tools/h5repack/testfiles/h5repack_int32le_2d.h5 Binary files differnew file mode 100644 index 0000000..2f32bd1 --- /dev/null +++ b/tools/h5repack/testfiles/h5repack_int32le_2d.h5 diff --git a/tools/h5repack/testfiles/h5repack_int32le_2d_ex-0.dat b/tools/h5repack/testfiles/h5repack_int32le_2d_ex-0.dat Binary files differnew file mode 100644 index 0000000..c6bfc64 --- /dev/null +++ b/tools/h5repack/testfiles/h5repack_int32le_2d_ex-0.dat diff --git a/tools/h5repack/testfiles/h5repack_int32le_2d_ex.h5 b/tools/h5repack/testfiles/h5repack_int32le_2d_ex.h5 Binary files differnew file mode 100644 index 0000000..f6cce59 --- /dev/null +++ b/tools/h5repack/testfiles/h5repack_int32le_2d_ex.h5 diff --git a/tools/h5repack/testfiles/h5repack_int32le_3d.h5 b/tools/h5repack/testfiles/h5repack_int32le_3d.h5 Binary files differnew file mode 100644 index 0000000..7a61ef5 --- /dev/null +++ b/tools/h5repack/testfiles/h5repack_int32le_3d.h5 diff --git a/tools/h5repack/testfiles/h5repack_int32le_3d_ex-0.dat b/tools/h5repack/testfiles/h5repack_int32le_3d_ex-0.dat Binary files differnew file mode 100644 index 0000000..b505eb4 --- /dev/null +++ b/tools/h5repack/testfiles/h5repack_int32le_3d_ex-0.dat diff --git a/tools/h5repack/testfiles/h5repack_int32le_3d_ex.h5 b/tools/h5repack/testfiles/h5repack_int32le_3d_ex.h5 Binary files differnew file mode 100644 index 0000000..7c4b750 --- /dev/null +++ b/tools/h5repack/testfiles/h5repack_int32le_3d_ex.h5 diff --git a/tools/h5repack/testfiles/h5repack_uint8be.h5 b/tools/h5repack/testfiles/h5repack_uint8be.h5 Binary files differnew file mode 100644 index 0000000..0e25211 --- /dev/null +++ b/tools/h5repack/testfiles/h5repack_uint8be.h5 diff --git a/tools/h5repack/testfiles/h5repack_uint8be_ex-0.dat b/tools/h5repack/testfiles/h5repack_uint8be_ex-0.dat Binary files differnew file mode 100644 index 0000000..f95b90a --- /dev/null +++ b/tools/h5repack/testfiles/h5repack_uint8be_ex-0.dat diff --git a/tools/h5repack/testfiles/h5repack_uint8be_ex-1.dat b/tools/h5repack/testfiles/h5repack_uint8be_ex-1.dat new file mode 100644 index 0000000..011ab48 --- /dev/null +++ b/tools/h5repack/testfiles/h5repack_uint8be_ex-1.dat @@ -0,0 +1 @@ +@BDFHJLNPRTVXZ\^`bdfhjlnprtvxz|~
\ No newline at end of file diff --git a/tools/h5repack/testfiles/h5repack_uint8be_ex-2.dat b/tools/h5repack/testfiles/h5repack_uint8be_ex-2.dat new file mode 100644 index 0000000..069b96d --- /dev/null +++ b/tools/h5repack/testfiles/h5repack_uint8be_ex-2.dat @@ -0,0 +1 @@ +}{ywusqomkigeca_][YWUSQOMKIGECA
\ No newline at end of file diff --git a/tools/h5repack/testfiles/h5repack_uint8be_ex-3.dat b/tools/h5repack/testfiles/h5repack_uint8be_ex-3.dat new file mode 100644 index 0000000..240d8ca --- /dev/null +++ b/tools/h5repack/testfiles/h5repack_uint8be_ex-3.dat @@ -0,0 +1 @@ +?=;97531/-+)'%#!
\ No newline at end of file diff --git a/tools/h5repack/testfiles/h5repack_uint8be_ex.h5 b/tools/h5repack/testfiles/h5repack_uint8be_ex.h5 Binary files differnew file mode 100644 index 0000000..8787188 --- /dev/null +++ b/tools/h5repack/testfiles/h5repack_uint8be_ex.h5 diff --git a/tools/h5repack/testh5repack_detect_szip.c b/tools/h5repack/testh5repack_detect_szip.c index 6e7a24e..6b86dd5 100644 --- a/tools/h5repack/testh5repack_detect_szip.c +++ b/tools/h5repack/testh5repack_detect_szip.c @@ -50,10 +50,10 @@ int main(void) #ifdef H5_HAVE_FILTER_SZIP if (h5tools_can_encode(H5Z_FILTER_SZIP) == 1) { - printf("yes\n"); + HDprintf("yes\n"); return(1); } #endif /* H5_HAVE_FILTER_SZIP */ - printf("no\n"); + HDprintf("no\n"); return(0); } diff --git a/tools/lib/io_timer.c b/tools/lib/io_timer.c index ab184d3..4ad2423 100644 --- a/tools/lib/io_timer.c +++ b/tools/lib/io_timer.c @@ -133,7 +133,7 @@ io_time_t * set_time(io_time_t *pt, timer_type t, int start_stop) { /* sanity check */ - assert(pt); + HDassert(pt); switch(pt->type){ #ifdef H5_HAVE_PARALLEL |