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authorAllen Byrne <50328838+byrnHDF@users.noreply.github.com>2022-03-14 13:04:54 (GMT)
committerGitHub <noreply@github.com>2022-03-14 13:04:54 (GMT)
commit65a13a3b73dd403acb0ba15a0666579b906a6fee (patch)
treebe88087ccbd717aa73adf3742e0a952eb4ec4666
parenta284d24df43a344394533582a144a065cd21576a (diff)
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1.8 Fix release check version logic #1438 (#1495)
-rwxr-xr-xconfig/cmake/scripts/HDF5config.cmake6
-rw-r--r--release_docs/RELEASE.txt18
-rw-r--r--src/H5.c93
-rw-r--r--test/CMakeTests.cmake2
-rw-r--r--test/testcheck_version.sh.in122
5 files changed, 158 insertions, 83 deletions
diff --git a/config/cmake/scripts/HDF5config.cmake b/config/cmake/scripts/HDF5config.cmake
index 5a44cde..21fbbfa 100755
--- a/config/cmake/scripts/HDF5config.cmake
+++ b/config/cmake/scripts/HDF5config.cmake
@@ -68,7 +68,7 @@ endif ()
# build generator must be defined
if (NOT DEFINED BUILD_GENERATOR)
- message (FATAL_ERROR "BUILD_GENERATOR must be defined - Unix, VS2019, VS201964, VS2017, or VS201764, VS2015, VS201564")
+ message (FATAL_ERROR "BUILD_GENERATOR must be defined - Unix, VS2019, VS201964, VS2017, VS201764, VS2015, VS201564")
endif ()
###################################################################
@@ -105,7 +105,7 @@ endif ()
######### Following describes compiler ############
if (NOT DEFINED HPC)
if (NOT DEFINED BUILD_GENERATOR)
- message (FATAL_ERROR "BUILD_GENERATOR must be defined - Unix, VS2019, VS201964, VS2017, or VS201764, VS2015, VS201564")
+ message (FATAL_ERROR "BUILD_GENERATOR must be defined - Unix, VS2019, VS201964, VS2017, VS201764, VS2015, VS201564")
endif ()
if (WIN32 AND NOT MINGW)
set (SITE_OS_NAME "Windows")
@@ -163,7 +163,7 @@ if (NOT DEFINED HPC)
set (SITE_COMPILER_NAME "vs2012")
set (SITE_COMPILER_VERSION "11")
else ()
- message (FATAL_ERROR "Invalid BUILD_GENERATOR must be - Unix, VS2017, or VS201764, VS2015, VS201564, VS2013, VS201364")
+ message (FATAL_ERROR "Invalid BUILD_GENERATOR must be - Unix, VS2019, VS201964, VS2017, VS201764, VS2015, VS201564")
endif ()
## Set the following to unique id your computer ##
set (CTEST_SITE "WIN7${BUILD_GENERATOR}.XXXX")
diff --git a/release_docs/RELEASE.txt b/release_docs/RELEASE.txt
index d28f162..08ea134 100644
--- a/release_docs/RELEASE.txt
+++ b/release_docs/RELEASE.txt
@@ -313,7 +313,23 @@ Bug Fixes since HDF5-1.8.22
Library
-------
- - None
+ - Issue #1436 identified a problem with the H5_VERS_RELEASE check in the
+ H5check_version function.
+
+ Investigating the original fix, #812, we discovered some inconsistencies
+ with a new block added to check H5_VERS_RELEASE for incompatibilities.
+ This new block was not using the new warning text dealing with the
+ H5_VERS_RELEASE check and would cause the warning to be duplicated.
+
+ By removing the H5_VERS_RELEASE argument in the first check for
+ H5_VERS_MAJOR and H5_VERS_MINOR, the second check would only check
+ the H5_VERS_RELEASE for incompatible release versions. This adheres
+ to the statement that except for the develop branch, all release versions
+ in a major.minor maintenance branch should be compatible. The prerequisite
+ is that an application will not use any APIs not present in all release versions.
+
+ (ADB - 2022/03/11, #1438)
+
Performance
diff --git a/src/H5.c b/src/H5.c
index cdc0ecd..d2f8fdc 100644
--- a/src/H5.c
+++ b/src/H5.c
@@ -57,6 +57,10 @@ static int H5_mpi_delete_cb(MPI_Comm comm, int keyval, void *attr_val, int *flag
/* Library Private Variables */
/*****************************/
+/* Library incompatible release versions */
+const unsigned VERS_RELEASE_EXCEPTIONS[] = {0};
+const unsigned VERS_RELEASE_EXCEPTIONS_SIZE = 0;
+
/* statically initialize block for pthread_once call used in initializing */
/* the first global mutex */
#ifdef H5_HAVE_THREADSAFE
@@ -635,17 +639,20 @@ done:
} /* end H5get_libversion() */
/*-------------------------------------------------------------------------
- * Function: H5check_version
+ * Function: H5check_version
*
- * Purpose: Verifies that the arguments match the version numbers
- * compiled into the library. This function is intended to be
- * called from user to verify that the versions of header files
- * compiled into the application match the version of the hdf5
- * library.
+ * Purpose: Verifies that the arguments match the version numbers
+ * compiled into the library. This function is intended to be
+ * called from user to verify that the versions of header files
+ * compiled into the application match the version of the hdf5
+ * library.
+ * Within major.minor.release version, the expectation
+ * is that all release versions are compatible, exceptions to
+ * this rule must be added to the VERS_RELEASE_EXCEPTIONS list.
*
- * Return: Success: SUCCEED
+ * Return: Success: SUCCEED
*
- * Failure: abort()
+ * Failure: abort()
*
*-------------------------------------------------------------------------
*/
@@ -658,6 +665,15 @@ done:
"linked with a different version of static or shared HDF5 library.\n" \
"You should recompile the application or check your shared library related\n" \
"settings such as 'LD_LIBRARY_PATH'.\n"
+#define RELEASE_MISMATCH_WARNING \
+ "Warning! ***HDF5 library release mismatched error***\n" \
+ "The HDF5 header files used to compile this application are not compatible with\n" \
+ "the version used by the HDF5 library to which this application is linked.\n" \
+ "Data corruption or segmentation faults may occur if the application continues.\n" \
+ "This can happen when an application was compiled by one version of HDF5 but\n" \
+ "linked with an incompatible version of static or shared HDF5 library.\n" \
+ "You should recompile the application or check your shared library related\n" \
+ "settings such as 'LD_LIBRARY_PATH'.\n"
herr_t
H5check_version(unsigned majnum, unsigned minnum, unsigned relnum)
@@ -667,6 +683,7 @@ H5check_version(unsigned majnum, unsigned minnum, unsigned relnum)
static int checked = 0; /* If we've already checked the version info */
static unsigned int disable_version_check = 0; /* Set if the version check should be disabled */
static const char * version_mismatch_warning = VERSION_MISMATCH_WARNING;
+ static const char * release_mismatch_warning = RELEASE_MISMATCH_WARNING;
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_API_NOINIT_NOERR_NOFS
@@ -686,7 +703,8 @@ H5check_version(unsigned majnum, unsigned minnum, unsigned relnum)
disable_version_check = (unsigned int)HDstrtol(s, NULL, 0);
}
- if (H5_VERS_MAJOR != majnum || H5_VERS_MINOR != minnum || H5_VERS_RELEASE != relnum) {
+ /* H5_VERS_MAJOR and H5_VERS_MINOR must match */
+ if (H5_VERS_MAJOR != majnum || H5_VERS_MINOR != minnum) {
switch (disable_version_check) {
case 0:
HDfprintf(stderr, "%s%s", version_mismatch_warning,
@@ -721,7 +739,51 @@ H5check_version(unsigned majnum, unsigned minnum, unsigned relnum)
break;
} /* end switch */
- } /* end if */
+ } /* end if (H5_VERS_MAJOR != majnum || H5_VERS_MINOR != minnum) */
+
+ /* H5_VERS_RELEASE should be compatible, we will only add checks for exceptions */
+ if (H5_VERS_RELEASE != relnum) {
+ for (unsigned i = 0; i < VERS_RELEASE_EXCEPTIONS_SIZE; i++) {
+ /* Check for incompatible headers or incompatible library */
+ if (VERS_RELEASE_EXCEPTIONS[i] == relnum || VERS_RELEASE_EXCEPTIONS[i] == H5_VERS_RELEASE) {
+ switch (disable_version_check) {
+ case 0:
+ HDfprintf(
+ stderr, "%s%s", release_mismatch_warning,
+ "You can, at your own risk, disable this warning by setting the environment\n"
+ "variable 'HDF5_DISABLE_VERSION_CHECK' to a value of '1'.\n"
+ "Setting it to 2 or higher will suppress the warning messages totally.\n");
+ /* Mention the versions we are referring to */
+ HDfprintf(stderr, "Headers are %u.%u.%u, library is %u.%u.%u\n", majnum, minnum,
+ relnum, (unsigned)H5_VERS_MAJOR, (unsigned)H5_VERS_MINOR,
+ (unsigned)H5_VERS_RELEASE);
+
+ /* Bail out now. */
+ HDfputs("Bye...\n", stderr);
+ HDabort();
+ case 1:
+ /* continue with a warning */
+ /* Note that the warning message is embedded in the format string.*/
+ HDfprintf(stderr,
+ "%s'HDF5_DISABLE_VERSION_CHECK' "
+ "environment variable is set to %d, application will\n"
+ "continue at your own risk.\n",
+ release_mismatch_warning, disable_version_check);
+ /* Mention the versions we are referring to */
+ HDfprintf(stderr, "Headers are %u.%u.%u, library is %u.%u.%u\n", majnum, minnum,
+ relnum, (unsigned)H5_VERS_MAJOR, (unsigned)H5_VERS_MINOR,
+ (unsigned)H5_VERS_RELEASE);
+ break;
+ default:
+ /* 2 or higher: continue silently */
+ break;
+ } /* end switch */
+
+ } /* end if */
+
+ } /* end for */
+
+ } /* end if (H5_VERS_RELEASE != relnum) */
/* Indicate that the version check has been performed */
checked = 1;
@@ -732,13 +794,10 @@ H5check_version(unsigned majnum, unsigned minnum, unsigned relnum)
* Check only the first sizeof(lib_str) char. Assume the information
* will fit within this size or enough significance.
*/
- HDsnprintf(lib_str, sizeof(lib_str), "HDF5 library version: %d.%d.%d", H5_VERS_MAJOR, H5_VERS_MINOR,
- H5_VERS_RELEASE);
- if (*substr) {
- HDstrncat(lib_str, "-", (size_t)1);
- HDstrncat(lib_str, substr, (sizeof(lib_str) - HDstrlen(lib_str)) - 1);
- } /* end if */
- if (HDstrcmp(lib_str, H5_lib_vers_info_g)) {
+ HDsnprintf(lib_str, sizeof(lib_str), "HDF5 library version: %d.%d.%d%s%s", H5_VERS_MAJOR,
+ H5_VERS_MINOR, H5_VERS_RELEASE, (*substr ? "-" : ""), substr);
+
+ if (HDstrcmp(lib_str, H5_lib_vers_info_g) != 0) {
HDfputs("Warning! Library version information error.\n"
"The HDF5 library version information are not "
"consistent in its source code.\nThis is NOT a fatal error "
diff --git a/test/CMakeTests.cmake b/test/CMakeTests.cmake
index 78722a6..21bd20d 100644
--- a/test/CMakeTests.cmake
+++ b/test/CMakeTests.cmake
@@ -376,10 +376,10 @@ set_tests_properties (H5TEST-tcheck_version-minor PROPERTIES
WORKING_DIRECTORY ${HDF5_TEST_BINARY_DIR}/H5TEST
WILL_FAIL "true"
)
+# release + 1 should pass on non-develop branches
add_test (NAME H5TEST-tcheck_version-release COMMAND ${CMAKE_CROSSCOMPILING_EMULATOR} $<TARGET_FILE:tcheck_version> "-tr")
set_tests_properties (H5TEST-tcheck_version-release PROPERTIES
WORKING_DIRECTORY ${HDF5_TEST_BINARY_DIR}/H5TEST
- WILL_FAIL "true"
)
##############################################################################
diff --git a/test/testcheck_version.sh.in b/test/testcheck_version.sh.in
index 667a137..273702e 100644
--- a/test/testcheck_version.sh.in
+++ b/test/testcheck_version.sh.in
@@ -15,7 +15,7 @@
# Tests for the H5check_version function.
#
# Programmer: Albert Cheng
-# Sep 28, 2009
+# Sep 28, 2009
srcdir=@srcdir@
@@ -24,7 +24,7 @@ srcdir=@srcdir@
Shared_Lib=@enable_shared@
Static_Lib=@enable_static@
Static_exec=@STATIC_EXEC@
-h5haveexitcode=yes # default is yes
+h5haveexitcode=yes # default is yes
CMP='cmp -s'
DIFF='diff -c'
@@ -36,7 +36,7 @@ RM='rm -f'
PURPOSE() {
echo "Tests for the H5check_version function."
echo "Note that abort messages may appear due to the expected termination"
- echo "of the program when it is tested with mis-matched version numnbers."
+ echo "of the program when it is tested with mis-matched version numbers."
}
# Print a line-line message left justified in a field of 70 characters.
@@ -71,7 +71,7 @@ WarnMesg(){
test -n "$H5_HAVE_EMBEDDED_LIBINFO" && cat $h5libsettings
echo "Bye..."
}
-
+
# Print warning message2 of version mismatch.
WarnMesg2(){
@@ -88,13 +88,13 @@ WarnMesg2(){
echo "Headers are $xxh5versmajor.$xxh5versminor.$xxh5versrelease, library is $h5versmajor.$h5versminor.$h5versrelease"
test -n "$H5_HAVE_EMBEDDED_LIBINFO" && cat $h5libsettings
}
-
+
# Run a test and print PASS or *FAIL*. If a test fails then increment
# the `nerrors' global variable and (if $verbose is set) display the
# difference between the actual output and the expected output. The
# expected output generated according to the parameter values and compared
-# against actual output.
+# against actual output.
# The expected and actual output files are removed unless $HDF5_NOCLEANUP
# has a non-zero value.
# $1: the set value of $HDF5_DISABLE_VERSION_CHECK. (unset means not to set
@@ -103,10 +103,10 @@ WarnMesg2(){
# mismatch).
#
# Expected results:
-# Value of $HDF5_DISABLE_VERSION_CHECK
-# unset "" -1 0 1 2 3
-# Matched OK OK OK OK OK OK OK
-# Mismatched W/A W/A W/A W/A W2/OK OK W2/OK
+# Value of $HDF5_DISABLE_VERSION_CHECK
+# unset "" -1 0 1 2 3
+# Matched OK OK OK OK OK OK OK
+# Mismatched W/A W/A W/A W/A W2/OK OK W2/OK
# Result codes:
# OK: No warning, exit 0.
# W/A: Warning, abort and exit non-0.
@@ -130,42 +130,42 @@ TESTING() {
xxh5versrelease=$h5versrelease
if [ "$h5DisableVersion" = unset ]; then
- envcmd="" # noop
+ envcmd="" # noop
else
- envcmd="env HDF5_DISABLE_VERSION_CHECK=$h5DisableVersion"
+ envcmd="env HDF5_DISABLE_VERSION_CHECK=$h5DisableVersion"
fi
if [ "$wrongversionnumbers" = none ]; then
- # OK: No warning, exit 0
- cp /dev/null $expect
- expect_code=0
+ # OK: No warning, exit 0
+ cp /dev/null $expect
+ expect_code=0
else
- arguments=-t"$wrongversionnumbers"
- # calculate mismatched version numbers by listing.
- case $wrongversionnumbers in
- "M") xxh5versmajor=`expr $h5versmajor + 1`
- ;;
- "m") xxh5versminor=`expr $h5versminor + 1`
- ;;
- "r") xxh5versrelease=`expr $h5versrelease + 1`
- ;;
- esac
- case "$h5DisableVersion" in
- 1)
- # W2/OK: Different Warning, exit 0.
- WarnMesg2 > $expect
- expect_code=0
- ;;
- [2-9]|[1-9][0-9]*)
- # OK: No warning, exit 0
- cp /dev/null $expect
- expect_code=0
- ;;
- *) # W/A: Warning, abort and exit non-0.
- WarnMesg > $expect
- expect_code=6 # Signal Abort exit code (128+6)
- ;;
- esac
+ arguments=-t"$wrongversionnumbers"
+ # calculate mismatched version numbers by listing.
+ case $wrongversionnumbers in
+ "M") xxh5versmajor=`expr $h5versmajor + 1`
+ ;;
+ "m") xxh5versminor=`expr $h5versminor + 1`
+ ;;
+ "r") xxh5versrelease=`expr $h5versrelease + 1`
+ ;;
+ esac
+ case "$h5DisableVersion" in
+ 1)
+ # W2/OK: Different Warning, exit 0.
+ WarnMesg2 > $expect
+ expect_code=0
+ ;;
+ [2-9]|[1-9][0-9]*)
+ # OK: No warning, exit 0
+ cp /dev/null $expect
+ expect_code=0
+ ;;
+ *) # W/A: Warning, abort and exit non-0.
+ WarnMesg > $expect
+ expect_code=6 # Signal Abort exit code (128+6)
+ ;;
+ esac
fi
# Run test.
@@ -175,25 +175,25 @@ TESTING() {
) >$actual 2>$actual_err
ret_code=$?
cat $actual_err >> $actual
-
+
if [ $h5haveexitcode = 'yes' -a \( $expect_code -ne $ret_code \) ]; then
- echo "*FAILED*"
- echo " Expected exit code ($expect_code) differs from actual code ($ret_code)"
- nerrors="`expr $nerrors + 1`"
+ echo "*FAILED*"
+ echo " Expected exit code ($expect_code) differs from actual code ($ret_code)"
+ nerrors="`expr $nerrors + 1`"
elif $CMP $expect $actual; then
- echo " PASSED"
+ echo " PASSED"
else
- echo "*FAILED*"
- echo " Expected result differs from actual result"
- nerrors="`expr $nerrors + 1`"
- test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /'
+ echo "*FAILED*"
+ echo " Expected result differs from actual result"
+ nerrors="`expr $nerrors + 1`"
+ test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /'
fi
- # Clean up output file.
+ # Clean up output file.
# Also clean the core file generated by H5check_version's abort.
if test -z "$HDF5_NOCLEANUP"; then
- $RM $expect $actual $actual_err
- $RM core
+ $RM $expect $actual $actual_err
+ $RM core
fi
}
@@ -201,17 +201,17 @@ TESTING() {
# Echo parameters for debugging if verbose mode is on.
DEBUGPRINT() {
if [ -n "$debugmode" ]; then
- echo $*
+ echo $*
fi
}
# MAIN Body
nerrors=0
-verbose=yes # default on
-debugmode= # default off
+verbose=yes # default on
+debugmode= # default off
H5_HAVE_EMBEDDED_LIBINFO=`grep '#define H5_HAVE_EMBEDDED_LIBINFO ' ../src/H5pubconf.h`
-h5libsettings=../src/libhdf5.settings
+h5libsettings=../src/libhdf5.settings
PURPOSE
@@ -232,7 +232,7 @@ esac
# RUNSERIAL is used. Check if it can return exit code from executalbe correctly.
if [ -n "$RUNSERIAL_NOEXITCODE" ]; then
- echo "***Warning*** Serial Exit Code is not passed back to shell corretly."
+ echo "***Warning*** Serial Exit Code is not passed back to shell correctly."
echo "***Warning*** Exit code checking is skipped."
h5haveexitcode=no
fi
@@ -240,13 +240,13 @@ fi
# Three Categories of tests:
# Normal: where the version numbers all matched (wrong_version == none).
# Mismatched version numbers (could be Major or minor version
-# or release numbers or a combination of all three.)
+# or release numbers or a combination of all three.)
# Test all the above with different values of the environment variable,
# HDF5_DISABLE_VERSION_CHECK, as unset, "", -1, 0, 1, 2, 3
for val_disable_version_check in unset "" -1 0 1 2 3; do
- for wrong_version in none M m r; do
- TESTING "$val_disable_version_check" "$wrong_version"
+ for wrong_version in none M m; do
+ TESTING "$val_disable_version_check" "$wrong_version"
done
done