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authorAllen Byrne <byrn@hdfgroup.org>2018-12-21 20:41:53 (GMT)
committerAllen Byrne <byrn@hdfgroup.org>2018-12-21 20:41:53 (GMT)
commit43bd13837d0c2e50651cbded2fae90d9189d1b73 (patch)
tree4561b6b8de2b394472fcc37a4fcddbffe39596fd
parentc8912e3c47384de7f66d37d3e65df2e6b0915069 (diff)
parent269224c73d19a12336dc0dd12e787c359dec5665 (diff)
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Merge pull request #1404 in HDFFV/hdf5 from ~BYRN/hdf5_adb:hdf5_1_10 to hdf5_1_10
* commit '269224c73d19a12336dc0dd12e787c359dec5665': Merge CMake changes from develop
-rw-r--r--MANIFEST3
-rw-r--r--c++/test/CMakeTests.cmake57
-rw-r--r--c++/test/CMakeVFDTests.cmake65
-rw-r--r--config/cmake_ext_mod/runTest.cmake8
-rw-r--r--examples/CMakeTests.cmake18
-rw-r--r--java/src/hdf/hdf5lib/H5.java104
-rw-r--r--java/src/jni/h5Constants.c4
-rw-r--r--testpar/CMakeTests.cmake49
-rw-r--r--testpar/CMakeVFDTests.cmake57
-rw-r--r--tools/test/h5repack/CMakeTests.cmake48
-rw-r--r--tools/test/h5repack/CMakeVFDTests.cmake65
11 files changed, 284 insertions, 194 deletions
diff --git a/MANIFEST b/MANIFEST
index e3c0cd4..57e1864 100644
--- a/MANIFEST
+++ b/MANIFEST
@@ -3229,6 +3229,7 @@
./c++/src/CMakeLists.txt
./c++/test/CMakeLists.txt
./c++/test/CMakeTests.cmake
+./c++/test/CMakeVFDTests.cmake
./examples/CMakeLists.txt
./examples/CMakeTests.cmake
./examples/run-all-ex.sh
@@ -3272,6 +3273,7 @@
./test/ShellTests.cmake
./testpar/CMakeLists.txt
./testpar/CMakeTests.cmake
+./testpar/CMakeVFDTests.cmake
./tools/CMakeLists.txt
./tools/lib/CMakeLists.txt
./tools/src/CMakeLists.txt
@@ -3304,6 +3306,7 @@
./tools/src/h5repack/CMakeLists.txt
./tools/test/h5repack/CMakeLists.txt
./tools/test/h5repack/CMakeTests.cmake
+./tools/test/h5repack/CMakeVFDTests.cmake
./tools/src/h5stat/CMakeLists.txt
./tools/test/h5stat/CMakeLists.txt
./tools/test/h5stat/CMakeTests.cmake
diff --git a/c++/test/CMakeTests.cmake b/c++/test/CMakeTests.cmake
index 6de801e..02bff3e 100644
--- a/c++/test/CMakeTests.cmake
+++ b/c++/test/CMakeTests.cmake
@@ -47,55 +47,12 @@ else ()
endif ()
set_tests_properties (CPP_testhdf5 PROPERTIES DEPENDS CPP_testhdf5-clear-objects)
-if (HDF5_TEST_VFD)
-
- set (VFD_LIST
- sec2
- stdio
- core
- split
- multi
- family
- )
-
- if (DIRECT_VFD)
- set (VFD_LIST ${VFD_LIST} direct)
- endif ()
-
- macro (ADD_VFD_TEST vfdname resultcode)
- if (NOT HDF5_ENABLE_USING_MEMCHECKER)
- file (MAKE_DIRECTORY "${PROJECT_BINARY_DIR}/${vfdname}")
- add_test (
- NAME CPP_VFD-${vfdname}-cpp_testhdf5-clear-objects
- COMMAND ${CMAKE_COMMAND}
- -E remove
- tattr_basic.h5
- tattr_compound.h5
- tattr_dtype.h5
- tattr_multi.h5
- tattr_scalar.h5
- tfattrs.h5
- titerate.h5
- )
- add_test (
- NAME CPP_VFD-${vfdname}-cpp_testhdf5
- COMMAND "${CMAKE_COMMAND}"
- -D "TEST_PROGRAM=$<TARGET_FILE:cpp_testhdf5>"
- -D "TEST_ARGS:STRING="
- -D "TEST_VFD:STRING=${vfdname}"
- -D "TEST_EXPECT=${resultcode}"
- -D "TEST_OUTPUT=cpp_testhdf5"
- -D "TEST_FOLDER=${PROJECT_BINARY_DIR}/${vfdname}"
- -P "${HDF_RESOURCES_DIR}/vfdTest.cmake"
- )
- set_tests_properties (CPP_VFD-${vfdname}-cpp_testhdf5 PROPERTIES DEPENDS CPP_VFD-${vfdname}-cpp_testhdf5-clear-objects)
- set_tests_properties (CPP_VFD-${vfdname}-cpp_testhdf5 PROPERTIES TIMEOUT 30)
- endif ()
- endmacro ()
-
- # Run test with different Virtual File Driver
- foreach (vfd ${VFD_LIST})
- ADD_VFD_TEST (${vfd} 0)
- endforeach ()
+##############################################################################
+##############################################################################
+### V F D T E S T S ###
+##############################################################################
+##############################################################################
+if (HDF5_TEST_VFD)
+ include (CMakeVFDTests.cmake)
endif ()
diff --git a/c++/test/CMakeVFDTests.cmake b/c++/test/CMakeVFDTests.cmake
new file mode 100644
index 0000000..996a20f
--- /dev/null
+++ b/c++/test/CMakeVFDTests.cmake
@@ -0,0 +1,65 @@
+#
+# Copyright by The HDF Group.
+# All rights reserved.
+#
+# This file is part of HDF5. The full HDF5 copyright notice, including
+# terms governing use, modification, and redistribution, is contained in
+# the COPYING file, which can be found at the root of the source code
+# distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases.
+# If you do not have access to either file, you may request a copy from
+# help@hdfgroup.org.
+#
+
+##############################################################################
+##############################################################################
+### T E S T I N G ###
+##############################################################################
+##############################################################################
+ set (VFD_LIST
+ sec2
+ stdio
+ core
+ split
+ multi
+ family
+ )
+
+ if (DIRECT_VFD)
+ set (VFD_LIST ${VFD_LIST} direct)
+ endif ()
+
+ macro (ADD_VFD_TEST vfdname resultcode)
+ if (NOT HDF5_ENABLE_USING_MEMCHECKER)
+ file (MAKE_DIRECTORY "${PROJECT_BINARY_DIR}/${vfdname}")
+ add_test (
+ NAME CPP_VFD-${vfdname}-cpp_testhdf5-clear-objects
+ COMMAND ${CMAKE_COMMAND}
+ -E remove
+ tattr_basic.h5
+ tattr_compound.h5
+ tattr_dtype.h5
+ tattr_multi.h5
+ tattr_scalar.h5
+ tfattrs.h5
+ titerate.h5
+ )
+ add_test (
+ NAME CPP_VFD-${vfdname}-cpp_testhdf5
+ COMMAND "${CMAKE_COMMAND}"
+ -D "TEST_PROGRAM=$<TARGET_FILE:cpp_testhdf5>"
+ -D "TEST_ARGS:STRING="
+ -D "TEST_VFD:STRING=${vfdname}"
+ -D "TEST_EXPECT=${resultcode}"
+ -D "TEST_OUTPUT=cpp_testhdf5"
+ -D "TEST_FOLDER=${PROJECT_BINARY_DIR}/${vfdname}"
+ -P "${HDF_RESOURCES_DIR}/vfdTest.cmake"
+ )
+ set_tests_properties (CPP_VFD-${vfdname}-cpp_testhdf5 PROPERTIES DEPENDS CPP_VFD-${vfdname}-cpp_testhdf5-clear-objects)
+ set_tests_properties (CPP_VFD-${vfdname}-cpp_testhdf5 PROPERTIES TIMEOUT 30)
+ endif ()
+ endmacro ()
+
+ # Run test with different Virtual File Driver
+ foreach (vfd ${VFD_LIST})
+ ADD_VFD_TEST (${vfd} 0)
+ endforeach ()
diff --git a/config/cmake_ext_mod/runTest.cmake b/config/cmake_ext_mod/runTest.cmake
index 0bc2db0..8181ff0 100644
--- a/config/cmake_ext_mod/runTest.cmake
+++ b/config/cmake_ext_mod/runTest.cmake
@@ -93,6 +93,8 @@ if (EXISTS ${TEST_FOLDER}/${TEST_OUTPUT}.err)
if (TEST_MASK_FILE)
STRING(REGEX REPLACE "CurrentDir is [^\n]+\n" "CurrentDir is (dir name)\n" TEST_STREAM "${TEST_STREAM}")
endif ()
+ # remove special output
+ string (REGEX REPLACE "^.*_pmi_alps[^\n]+\n" "" TEST_STREAM "${TEST_STREAM}")
if (NOT ERROR_APPEND)
# append error output to the stdout output file
@@ -121,6 +123,11 @@ endif ()
message (STATUS "COMMAND Error: ${TEST_ERROR}")
+# remove special output
+file (READ ${TEST_FOLDER}/${TEST_OUTPUT} TEST_STREAM)
+string (REGEX REPLACE "^.*_pmi_alps[^\n]+\n" "" TEST_STREAM "${TEST_STREAM}")
+file (WRITE ${TEST_FOLDER}/${TEST_OUTPUT} "${TEST_STREAM}")
+
# if the output file needs Storage text removed
if (TEST_MASK)
file (READ ${TEST_FOLDER}/${TEST_OUTPUT} TEST_STREAM)
@@ -144,7 +151,6 @@ if (TEST_MASK_ERROR)
# the error stack remains in the .err file
file (READ ${TEST_FOLDER}/${TEST_OUTPUT}.err TEST_STREAM)
endif ()
- string (REGEX REPLACE "^.*_pmi_alps[^\n]+\n" "" TEST_STREAM "${TEST_STREAM}")
string (REGEX REPLACE "thread [0-9]*:" "thread (IDs):" TEST_STREAM "${TEST_STREAM}")
string (REGEX REPLACE ": ([^\n]*)[.]c " ": (file name) " TEST_STREAM "${TEST_STREAM}")
string (REGEX REPLACE " line [0-9]*" " line (number)" TEST_STREAM "${TEST_STREAM}")
diff --git a/examples/CMakeTests.cmake b/examples/CMakeTests.cmake
index dd4766a..6b4504b 100644
--- a/examples/CMakeTests.cmake
+++ b/examples/CMakeTests.cmake
@@ -181,9 +181,9 @@
### Windows pops up a modal permission dialog on this test
if (H5_HAVE_PARALLEL AND NOT WIN32)
if (HDF5_ENABLE_USING_MEMCHECKER)
- add_test (NAME EXAMPLES-ph5example COMMAND $<TARGET_FILE:ph5example>)
+ add_test (NAME EXAMPLES_PAR-ph5example COMMAND $<TARGET_FILE:ph5example>)
else ()
- add_test (NAME EXAMPLES-ph5example COMMAND "${CMAKE_COMMAND}"
+ add_test (NAME EXAMPLES_PAR-ph5example COMMAND "${CMAKE_COMMAND}"
-D "TEST_PROGRAM=$<TARGET_FILE:ph5example>"
-D "TEST_ARGS:STRING="
-D "TEST_EXPECT=0"
@@ -195,14 +195,14 @@
)
endif ()
if (NOT "${last_test}" STREQUAL "")
- set_tests_properties (EXAMPLES-ph5example PROPERTIES DEPENDS ${last_test})
+ set_tests_properties (EXAMPLES_PAR-ph5example PROPERTIES DEPENDS ${last_test})
endif ()
- set (last_test "EXAMPLES-ph5example")
+ set (last_test "EXAMPLES_PAR-ph5example")
if (BUILD_SHARED_LIBS)
if (HDF5_ENABLE_USING_MEMCHECKER)
- add_test (NAME EXAMPLES-shared-ph5example COMMAND $<TARGET_FILE:ph5example-shared>)
+ add_test (NAME EXAMPLES_PAR-shared-ph5example COMMAND $<TARGET_FILE:ph5example-shared>)
else ()
- add_test (NAME EXAMPLES-shared-ph5example COMMAND "${CMAKE_COMMAND}"
+ add_test (NAME EXAMPLES_PAR-shared-ph5example COMMAND "${CMAKE_COMMAND}"
-D "TEST_PROGRAM=$<TARGET_FILE:ph5example-shared>"
-D "TEST_ARGS:STRING="
-D "TEST_EXPECT=0"
@@ -213,10 +213,10 @@
-P "${HDF_RESOURCES_EXT_DIR}/runTest.cmake"
)
endif ()
- set_tests_properties (EXAMPLES-shared-ph5example PROPERTIES WORKING_DIRECTORY ${PROJECT_BINARY_DIR}/H5EX-shared)
+ set_tests_properties (EXAMPLES_PAR-shared-ph5example PROPERTIES WORKING_DIRECTORY ${PROJECT_BINARY_DIR}/H5EX-shared)
if (NOT "${last_test}" STREQUAL "")
- set_tests_properties (EXAMPLES-shared-ph5example PROPERTIES DEPENDS ${last_test})
+ set_tests_properties (EXAMPLES_PAR-shared-ph5example PROPERTIES DEPENDS ${last_test})
endif ()
- set (last_test "EXAMPLES-shared-ph5example")
+ set (last_test "EXAMPLES_PAR-shared-ph5example")
endif ()
endif ()
diff --git a/java/src/hdf/hdf5lib/H5.java b/java/src/hdf/hdf5lib/H5.java
index 751528e..9f4e4f9 100644
--- a/java/src/hdf/hdf5lib/H5.java
+++ b/java/src/hdf/hdf5lib/H5.java
@@ -499,9 +499,9 @@ public class H5 implements java.io.Serializable {
private synchronized static native boolean H5is_library_threadsafe();
// /////// unimplemented ////////
- // H5_DLL herr_t H5free_memory(void *mem);
- // H5_DLL void *H5allocate_memory(size_t size, hbool_t clear);
- // H5_DLL void *H5resize_memory(void *mem, size_t size);
+ // herr_t H5free_memory(void *mem);
+ // void *H5allocate_memory(size_t size, hbool_t clear);
+ // void *H5resize_memory(void *mem, size_t size);
// ////////////////////////////////////////////////////////////
// //
@@ -2402,10 +2402,10 @@ public class H5 implements java.io.Serializable {
public synchronized static native void H5Drefresh(long dset_id) throws HDF5LibraryException;
// /////// unimplemented ////////
- // H5_DLL herr_t H5Ddebug(hid_t dset_id);
- // H5_DLL herr_t H5Dget_chunk_storage_size(hid_t dset_id, const hsize_t *offset, hsize_t *chunk_bytes);
- // H5_DLL herr_t H5Dformat_convert(hid_t dset_id);
- // H5_DLL herr_t H5Dget_chunk_index_type(hid_t did, H5D_chunk_index_t *idx_type);
+ // herr_t H5Ddebug(hid_t dset_id);
+ // herr_t H5Dget_chunk_storage_size(hid_t dset_id, const hsize_t *offset, hsize_t *chunk_bytes);
+ // herr_t H5Dformat_convert(hid_t dset_id);
+ // herr_t H5Dget_chunk_index_type(hid_t did, H5D_chunk_index_t *idx_type);
// herr_t H5Dgather(hid_t src_space_id, const void *src_buf, hid_t type_id,
// size_t dst_buf_size, void *dst_buf, H5D_gather_func_t op, void *op_data);
@@ -3211,20 +3211,20 @@ public class H5 implements java.io.Serializable {
throws HDF5LibraryException, NullPointerException;
// /////// unimplemented ////////
- // H5_DLL herr_t H5Fget_eoa(hid_t file_id, haddr_t *eoa);
- // H5_DLL herr_t H5Fincrement_filesize(hid_t file_id, hsize_t increment);
+ // herr_t H5Fget_eoa(hid_t file_id, haddr_t *eoa);
+ // herr_t H5Fincrement_filesize(hid_t file_id, hsize_t increment);
// ssize_t H5Fget_file_image(hid_t file_id, void * buf_ptr, size_t buf_len);
// herr_t H5Fget_metadata_read_retry_info(hid_t file_id, H5F_retry_info_t *info);
// ssize_t H5Fget_free_sections(hid_t file_id, H5F_mem_t type, size_t nsects, H5F_sect_info_t *sect_info/*out*/);
- // H5_DLL herr_t H5Fset_libver_bounds(hid_t file_id, H5F_libver_t low, H5F_libver_t high);
- // H5_DLL herr_t H5Fformat_convert(hid_t fid);
- // H5_DLL herr_t H5Freset_page_buffering_stats(hid_t file_id);
- // H5_DLL herr_t H5Fget_page_buffering_stats(hid_t file_id, unsigned accesses[2],
+ // herr_t H5Fset_libver_bounds(hid_t file_id, H5F_libver_t low, H5F_libver_t high);
+ // herr_t H5Fformat_convert(hid_t fid);
+ // herr_t H5Freset_page_buffering_stats(hid_t file_id);
+ // herr_t H5Fget_page_buffering_stats(hid_t file_id, unsigned accesses[2],
// unsigned hits[2], unsigned misses[2], unsigned evictions[2], unsigned bypasses[2]);
- // H5_DLL herr_t H5Fget_mdc_image_info(hid_t file_id, haddr_t *image_addr, hsize_t *image_size);
+ // herr_t H5Fget_mdc_image_info(hid_t file_id, haddr_t *image_addr, hsize_t *image_size);
// #ifdef H5_HAVE_PARALLEL
- // H5_DLL herr_t H5Fset_mpi_atomicity(hid_t file_id, hbool_t flag);
- // H5_DLL herr_t H5Fget_mpi_atomicity(hid_t file_id, hbool_t *flag);
+ // herr_t H5Fset_mpi_atomicity(hid_t file_id, hbool_t flag);
+ // herr_t H5Fget_mpi_atomicity(hid_t file_id, hbool_t *flag);
// #endif /* H5_HAVE_PARALLEL */
// /**
@@ -3284,25 +3284,25 @@ public class H5 implements java.io.Serializable {
// ////////////////////////////////////////////////////////////
// /////// unimplemented ////////
- // H5_DLL hid_t H5FDregister(const H5FD_class_t *cls);
- // H5_DLL herr_t H5FDunregister(hid_t driver_id);
- // H5_DLL H5FD_t *H5FDopen(const char *name, unsigned flags, hid_t fapl_id, haddr_t maxaddr);
- // H5_DLL herr_t H5FDclose(H5FD_t *file);
- // H5_DLL int H5FDcmp(const H5FD_t *f1, const H5FD_t *f2);
- // H5_DLL int H5FDquery(const H5FD_t *f, unsigned long *flags);
- // H5_DLL haddr_t H5FDalloc(H5FD_t *file, H5FD_mem_t type, hid_t dxpl_id, hsize_t size);
- // H5_DLL herr_t H5FDfree(H5FD_t *file, H5FD_mem_t type, hid_t dxpl_id, haddr_t addr, hsize_t size);
- // H5_DLL haddr_t H5FDget_eoa(H5FD_t *file, H5FD_mem_t type);
- // H5_DLL herr_t H5FDset_eoa(H5FD_t *file, H5FD_mem_t type, haddr_t eoa);
- // H5_DLL haddr_t H5FDget_eof(H5FD_t *file, H5FD_mem_t type);
- // H5_DLL herr_t H5FDget_vfd_handle(H5FD_t *file, hid_t fapl, void**file_handle);
- // H5_DLL herr_t H5FDread(H5FD_t *file, H5FD_mem_t type, hid_t dxpl_id, haddr_t addr, size_t size, void *buf/*out*/);
- // H5_DLL herr_t H5FDwrite(H5FD_t *file, H5FD_mem_t type, hid_t dxpl_id, haddr_t addr, size_t size, const void *buf);
- // H5_DLL herr_t H5FDflush(H5FD_t *file, hid_t dxpl_id, hbool_t closing);
- // H5_DLL herr_t H5FDtruncate(H5FD_t *file, hid_t dxpl_id, hbool_t closing);
- // H5_DLL herr_t H5FDlock(H5FD_t *file, hbool_t rw);
- // H5_DLL herr_t H5FDunlock(H5FD_t *file);
- // H5_DLL herr_t H5FDdriver_query(hid_t driver_id, unsigned long *flags/*out*/);
+ // hid_t H5FDregister(const H5FD_class_t *cls);
+ // herr_t H5FDunregister(hid_t driver_id);
+ // H5FD_t *H5FDopen(const char *name, unsigned flags, hid_t fapl_id, haddr_t maxaddr);
+ // herr_t H5FDclose(H5FD_t *file);
+ // int H5FDcmp(const H5FD_t *f1, const H5FD_t *f2);
+ // int H5FDquery(const H5FD_t *f, unsigned long *flags);
+ // haddr_t H5FDalloc(H5FD_t *file, H5FD_mem_t type, hid_t dxpl_id, hsize_t size);
+ // herr_t H5FDfree(H5FD_t *file, H5FD_mem_t type, hid_t dxpl_id, haddr_t addr, hsize_t size);
+ // haddr_t H5FDget_eoa(H5FD_t *file, H5FD_mem_t type);
+ // herr_t H5FDset_eoa(H5FD_t *file, H5FD_mem_t type, haddr_t eoa);
+ // haddr_t H5FDget_eof(H5FD_t *file, H5FD_mem_t type);
+ // herr_t H5FDget_vfd_handle(H5FD_t *file, hid_t fapl, void**file_handle);
+ // herr_t H5FDread(H5FD_t *file, H5FD_mem_t type, hid_t dxpl_id, haddr_t addr, size_t size, void *buf/*out*/);
+ // herr_t H5FDwrite(H5FD_t *file, H5FD_mem_t type, hid_t dxpl_id, haddr_t addr, size_t size, const void *buf);
+ // herr_t H5FDflush(H5FD_t *file, hid_t dxpl_id, hbool_t closing);
+ // herr_t H5FDtruncate(H5FD_t *file, hid_t dxpl_id, hbool_t closing);
+ // herr_t H5FDlock(H5FD_t *file, hbool_t rw);
+ // herr_t H5FDunlock(H5FD_t *file);
+ // herr_t H5FDdriver_query(hid_t driver_id, unsigned long *flags/*out*/);
// ////////////////////////////////////////////////////////////
// //
@@ -3775,7 +3775,7 @@ public class H5 implements java.io.Serializable {
// ////////////////////////////////////////////////////////////
// //
- // H5I: HDF5 1.8 Identifier Interface API Functions //
+ // H5I: HDF5 Identifier Interface API Functions //
// //
// ////////////////////////////////////////////////////////////
@@ -4964,9 +4964,9 @@ public class H5 implements java.io.Serializable {
public synchronized static native void H5Orefresh(long object_id) throws HDF5LibraryException;
// /////// unimplemented ////////
- // H5_DLL herr_t H5Odisable_mdc_flushes(hid_t object_id);
- // H5_DLL herr_t H5Oenable_mdc_flushes(hid_t object_id);
- // H5_DLL herr_t H5Oare_mdc_flushes_disabled(hid_t object_id, hbool_t *are_disabled);
+ // herr_t H5Odisable_mdc_flushes(hid_t object_id);
+ // herr_t H5Oenable_mdc_flushes(hid_t object_id);
+ // herr_t H5Oare_mdc_flushes_disabled(hid_t object_id, hbool_t *are_disabled);
// ////////////////////////////////////////////////////////////
// //
@@ -7792,13 +7792,13 @@ public class H5 implements java.io.Serializable {
// herr_t H5Pget_core_write_tracking(hid_t fapl_id, hbool_t *is_enabled, size_t *page_size);
// #ifdef H5_HAVE_PARALLEL
// herr_t H5Pset_all_coll_metadata_ops(hid_t accpl_id, hbool_t is_collective);
- // H5_DLL herr_t H5Pget_all_coll_metadata_ops(hid_t plist_id, hbool_t *is_collective);
+ // herr_t H5Pget_all_coll_metadata_ops(hid_t plist_id, hbool_t *is_collective);
// herr_t H5Pset_coll_metadata_write(hid_t fapl_id, hbool_t is_collective);
// herr_t H5Pget_coll_metadata_write(hid_t fapl_id, hbool_t *is_collective);
// #endif /* H5_HAVE_PARALLEL */
- // H5_DLL herr_t H5Pset_mdc_image_config(hid_t plist_id, H5AC_cache_image_config_t *config_ptr);
- // H5_DLL herr_t H5Pget_mdc_image_config(hid_t plist_id, H5AC_cache_image_config_t *config_ptr /*out*/);
- // H5_DLL herr_t H5Pset_page_buffer_size(hid_t plist_id, size_t buf_size, unsigned min_meta_per, unsigned min_raw_per);
+ // herr_t H5Pset_mdc_image_config(hid_t plist_id, H5AC_cache_image_config_t *config_ptr);
+ // herr_t H5Pget_mdc_image_config(hid_t plist_id, H5AC_cache_image_config_t *config_ptr /*out*/);
+ // herr_t H5Pset_page_buffer_size(hid_t plist_id, size_t buf_size, unsigned min_meta_per, unsigned min_raw_per);
// herr_t H5Pget_page_buffer_size(hid_t fapl_id, size_t *buf_size, unsigned *min_meta_perc, unsigned *min_raw_perc);
// herr_t H5Pset_object_flush_cb (hid_t fapl_id, H5F_flush_cb_t func, void *user_data);
// herr_t H5Pget_object_flush_cb (hid_t fapl_id, H5F_flush_cb_t *func, void **user_data);
@@ -7821,9 +7821,9 @@ public class H5 implements java.io.Serializable {
// herr_t H5Pget_type_conv_cb(hid_t plist, H5T_conv_except_func_t *func, void **op_data)
// herr_t H5Pset_type_conv_cb( hid_t plist, H5T_conv_except_func_t func, void *op_data)
// #ifdef H5_HAVE_PARALLEL
- // H5_DLL herr_t H5Pget_mpio_actual_chunk_opt_mode(hid_t plist_id, H5D_mpio_actual_chunk_opt_mode_t *actual_chunk_opt_mode);
- // H5_DLL herr_t H5Pget_mpio_actual_io_mode(hid_t plist_id, H5D_mpio_actual_io_mode_t *actual_io_mode);
- // H5_DLL herr_t H5Pget_mpio_no_collective_cause(hid_t plist_id, uint32_t *local_no_collective_cause, uint32_t *global_no_collective_cause);
+ // herr_t H5Pget_mpio_actual_chunk_opt_mode(hid_t plist_id, H5D_mpio_actual_chunk_opt_mode_t *actual_chunk_opt_mode);
+ // herr_t H5Pget_mpio_actual_io_mode(hid_t plist_id, H5D_mpio_actual_io_mode_t *actual_io_mode);
+ // herr_t H5Pget_mpio_no_collective_cause(hid_t plist_id, uint32_t *local_no_collective_cause, uint32_t *global_no_collective_cause);
// #endif /* H5_HAVE_PARALLEL */
// Link creation property list (LCPL) routines //
@@ -8766,14 +8766,14 @@ public class H5 implements java.io.Serializable {
// /////// unimplemented ////////
// #ifdef NEW_HYPERSLAB_API
- // H5_DLL hid_t H5Scombine_hyperslab(hid_t space_id, H5S_seloper_t op,
+ // hid_t H5Scombine_hyperslab(hid_t space_id, H5S_seloper_t op,
// const hsize_t start[],
// const hsize_t _stride[],
// const hsize_t count[],
// const hsize_t _block[]);
- // H5_DLL herr_t H5Sselect_select(hid_t space1_id, H5S_seloper_t op,
+ // herr_t H5Sselect_select(hid_t space1_id, H5S_seloper_t op,
// hid_t space2_id);
- // H5_DLL hid_t H5Scombine_select(hid_t space1_id, H5S_seloper_t op,
+ // hid_t H5Scombine_select(hid_t space1_id, H5S_seloper_t op,
// hid_t space2_id);
// #endif /* NEW_HYPERSLAB_API */
@@ -10264,9 +10264,9 @@ public class H5 implements java.io.Serializable {
public synchronized static native int H5Zunregister(int filter) throws HDF5LibraryException, NullPointerException;
-}
+ // /////// unimplemented ////////
-// /////// unimplemented ////////
+ // herr_t H5Zregister(const void *cls);
-// herr_t H5Zregister(const void *cls);
+}
diff --git a/java/src/jni/h5Constants.c b/java/src/jni/h5Constants.c
index c99745d..1ea549e 100644
--- a/java/src/jni/h5Constants.c
+++ b/java/src/jni/h5Constants.c
@@ -21,8 +21,10 @@
extern "C" {
#endif /* __cplusplus */
-#include <jni.h>
#include "hdf5.h"
+#include <jni.h>
+#include <stdlib.h>
+#include "h5jni.h"
#pragma GCC diagnostic push
#pragma GCC diagnostic ignored "-Wmissing-prototypes"
diff --git a/testpar/CMakeTests.cmake b/testpar/CMakeTests.cmake
index 87470f3..dffb813 100644
--- a/testpar/CMakeTests.cmake
+++ b/testpar/CMakeTests.cmake
@@ -27,47 +27,12 @@ endforeach ()
set_property (TEST TEST_PAR_t_pflush1 PROPERTY PASS_REGULAR_EXPRESSION "PASSED")
set_tests_properties (TEST_PAR_t_pflush2 PROPERTIES DEPENDS TEST_PAR_t_pflush1)
-if (HDF5_TEST_VFD)
-
- set (VFD_LIST
- sec2
- stdio
- core
- split
- multi
- family
- )
-
- set (H5P_VFD_TESTS
- t_pflush1
- t_pflush2
- )
-
- if (DIRECT_VFD)
- set (VFD_LIST ${VFD_LIST} direct)
- endif ()
-
- macro (ADD_VFD_TEST vfdname resultcode)
- if (NOT HDF5_ENABLE_USING_MEMCHECKER)
- foreach (test ${H5P_VFD_TESTS})
- add_test (
- NAME TEST_PAR_VFD-${vfdname}-${test}
- COMMAND "${CMAKE_COMMAND}"
- -D "TEST_PROGRAM=$<TARGET_FILE:${test}>"
- -D "TEST_ARGS:STRING="
- -D "TEST_VFD:STRING=${vfdname}"
- -D "TEST_EXPECT=${resultcode}"
- -D "TEST_OUTPUT=${test}"
- -D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
- -P "${HDF_RESOURCES_DIR}/vfdTest.cmake"
- )
- endforeach ()
- endif ()
- endmacro ()
-
- # Run test with different Virtual File Driver
- foreach (vfd ${VFD_LIST})
- ADD_VFD_TEST (${vfd} 0)
- endforeach ()
+##############################################################################
+##############################################################################
+### V F D T E S T S ###
+##############################################################################
+##############################################################################
+if (HDF5_TEST_VFD)
+ include (CMakeVFDTests.cmake)
endif ()
diff --git a/testpar/CMakeVFDTests.cmake b/testpar/CMakeVFDTests.cmake
new file mode 100644
index 0000000..b6b065f
--- /dev/null
+++ b/testpar/CMakeVFDTests.cmake
@@ -0,0 +1,57 @@
+#
+# Copyright by The HDF Group.
+# All rights reserved.
+#
+# This file is part of HDF5. The full HDF5 copyright notice, including
+# terms governing use, modification, and redistribution, is contained in
+# the COPYING file, which can be found at the root of the source code
+# distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases.
+# If you do not have access to either file, you may request a copy from
+# help@hdfgroup.org.
+#
+
+##############################################################################
+##############################################################################
+### T E S T I N G ###
+##############################################################################
+##############################################################################
+ set (VFD_LIST
+ sec2
+ stdio
+ core
+ split
+ multi
+ family
+ )
+
+ set (H5P_VFD_TESTS
+ t_pflush1
+ t_pflush2
+ )
+
+ if (DIRECT_VFD)
+ set (VFD_LIST ${VFD_LIST} direct)
+ endif ()
+
+ macro (ADD_VFD_TEST vfdname resultcode)
+ if (NOT HDF5_ENABLE_USING_MEMCHECKER)
+ foreach (test ${H5P_VFD_TESTS})
+ add_test (
+ NAME TEST_PAR_VFD-${vfdname}-${test}
+ COMMAND "${CMAKE_COMMAND}"
+ -D "TEST_PROGRAM=$<TARGET_FILE:${test}>"
+ -D "TEST_ARGS:STRING="
+ -D "TEST_VFD:STRING=${vfdname}"
+ -D "TEST_EXPECT=${resultcode}"
+ -D "TEST_OUTPUT=${test}"
+ -D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
+ -P "${HDF_RESOURCES_DIR}/vfdTest.cmake"
+ )
+ endforeach ()
+ endif ()
+ endmacro ()
+
+ # Run test with different Virtual File Driver
+ foreach (vfd ${VFD_LIST})
+ ADD_VFD_TEST (${vfd} 0)
+ endforeach ()
diff --git a/tools/test/h5repack/CMakeTests.cmake b/tools/test/h5repack/CMakeTests.cmake
index ad468f0..c2a2be7 100644
--- a/tools/test/h5repack/CMakeTests.cmake
+++ b/tools/test/h5repack/CMakeTests.cmake
@@ -16,39 +16,6 @@
##############################################################################
##############################################################################
- if (HDF5_TEST_VFD)
- set (VFD_LIST
- sec2
- stdio
- core
- split
- multi
- family
- )
-
- if (DIRECT_VFD)
- set (VFD_LIST ${VFD_LIST} direct)
- endif ()
-
- macro (ADD_VFD_TEST vfdname resultcode)
- add_test (
- NAME H5REPACK-VFD-${vfdname}-h5repacktest
- COMMAND "${CMAKE_COMMAND}"
- -D "TEST_PROGRAM=$<TARGET_FILE:h5repacktest>"
- -D "TEST_ARGS:STRING="
- -D "TEST_VFD:STRING=${vfdname}"
- -D "TEST_EXPECT=${resultcode}"
- -D "TEST_OUTPUT=h5repacktest"
- -D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
- -P "${HDF_RESOURCES_DIR}/vfdTest.cmake"
- )
- if (NOT "${last_test}" STREQUAL "")
- set_tests_properties (H5REPACK-VFD-${vfdname}-h5repacktest PROPERTIES DEPENDS ${last_test})
- endif ()
- set (last_test "H5REPACK-VFD-${vfdname}-h5repacktest")
- endmacro ()
- endif ()
-
# --------------------------------------------------------------------
# Copy all the HDF5 files from the source directory into the test directory
# --------------------------------------------------------------------
@@ -1459,9 +1426,12 @@ if (BUILD_SHARED_LIBS)
ADD_H5_UD_TEST (plugin_zero 0 h5repack_layout.h5 -v -f UD=250,0,0)
endif ()
- if (HDF5_TEST_VFD)
- # Run test with different Virtual File Driver
- foreach (vfd ${VFD_LIST})
- ADD_VFD_TEST (${vfd} 0)
- endforeach ()
- endif ()
+##############################################################################
+##############################################################################
+### V F D T E S T S ###
+##############################################################################
+##############################################################################
+
+if (HDF5_TEST_VFD)
+ include (CMakeVFDTests.cmake)
+endif ()
diff --git a/tools/test/h5repack/CMakeVFDTests.cmake b/tools/test/h5repack/CMakeVFDTests.cmake
new file mode 100644
index 0000000..2042f31
--- /dev/null
+++ b/tools/test/h5repack/CMakeVFDTests.cmake
@@ -0,0 +1,65 @@
+#
+# Copyright by The HDF Group.
+# All rights reserved.
+#
+# This file is part of HDF5. The full HDF5 copyright notice, including
+# terms governing use, modification, and redistribution, is contained in
+# the COPYING file, which can be found at the root of the source code
+# distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases.
+# If you do not have access to either file, you may request a copy from
+# help@hdfgroup.org.
+#
+
+##############################################################################
+##############################################################################
+### T E S T I N G ###
+##############################################################################
+##############################################################################
+
+ set (VFD_LIST
+ sec2
+ stdio
+ core
+ split
+ multi
+ family
+ )
+
+ if (DIRECT_VFD)
+ set (VFD_LIST ${VFD_LIST} direct)
+ endif ()
+
+##############################################################################
+##############################################################################
+### T H E T E S T S M A C R O S ###
+##############################################################################
+##############################################################################
+
+ macro (ADD_VFD_TEST vfdname resultcode)
+ add_test (
+ NAME H5REPACK-VFD-${vfdname}-h5repacktest
+ COMMAND "${CMAKE_COMMAND}"
+ -D "TEST_PROGRAM=$<TARGET_FILE:h5repacktest>"
+ -D "TEST_ARGS:STRING="
+ -D "TEST_VFD:STRING=${vfdname}"
+ -D "TEST_EXPECT=${resultcode}"
+ -D "TEST_OUTPUT=h5repacktest"
+ -D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
+ -P "${HDF_RESOURCES_DIR}/vfdTest.cmake"
+ )
+ if (NOT "${last_test}" STREQUAL "")
+ set_tests_properties (H5REPACK-VFD-${vfdname}-h5repacktest PROPERTIES DEPENDS ${last_test})
+ endif ()
+ set (last_test "H5REPACK-VFD-${vfdname}-h5repacktest")
+ endmacro ()
+
+##############################################################################
+##############################################################################
+### T H E T E S T S ###
+##############################################################################
+##############################################################################
+
+ # Run test with different Virtual File Driver
+ foreach (vfd ${VFD_LIST})
+ ADD_VFD_TEST (${vfd} 0)
+ endforeach ()