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author | Vishwanath Venkatesan <vish@hdfgroup.org> | 2013-08-13 00:46:30 (GMT) |
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committer | Vishwanath Venkatesan <vish@hdfgroup.org> | 2013-08-13 00:46:30 (GMT) |
commit | 6c9171e9c80b983b72ae9e9ee537fd90bb558dd5 (patch) | |
tree | 6bc212e4c20188d39f2170b0d273f2be512a1a48 | |
parent | 906abf11cfcf8ec5a7547888d3e01f0886baf152 (diff) | |
download | hdf5-6c9171e9c80b983b72ae9e9ee537fd90bb558dd5.zip hdf5-6c9171e9c80b983b72ae9e9ee537fd90bb558dd5.tar.gz hdf5-6c9171e9c80b983b72ae9e9ee537fd90bb558dd5.tar.bz2 |
[svn-r23998] Comitting changes to test directory with more tests.
-rw-r--r-- | test/compactor_write_tests/Makefile | 15 | ||||
-rw-r--r-- | test/compactor_write_tests/eff_file.h5 | bin | 1656 -> 0 bytes | |||
-rw-r--r-- | test/compactor_write_tests/native-parallel-write-large.c | 144 | ||||
-rw-r--r-- | test/compactor_write_tests/native-parallel-write.c | 6 | ||||
-rw-r--r-- | test/compactor_write_tests/native_read_1.c | 160 | ||||
-rw-r--r-- | test/compactor_write_tests/native_read_2.c | 233 | ||||
-rw-r--r-- | test/compactor_write_tests/native_write_test1.c | 10 | ||||
-rw-r--r-- | test/compactor_write_tests/native_write_test3.c | 16 | ||||
-rw-r--r-- | test/compactor_write_tests/read_test_2.c | 85 | ||||
-rw-r--r-- | test/compactor_write_tests/read_test_3.c | 197 |
10 files changed, 765 insertions, 101 deletions
diff --git a/test/compactor_write_tests/Makefile b/test/compactor_write_tests/Makefile index f9bed45..8c75a6d 100644 --- a/test/compactor_write_tests/Makefile +++ b/test/compactor_write_tests/Makefile @@ -1,27 +1,28 @@ -all: multiple-writes parallel-writes native-writes read-tests server +all: writes natives reads server -multiple-writes: +writes: h5pcc -o multiple-writes-test1 multiple-writes-test1.c h5pcc -o multiple-writes-test2 multiple-writes-test2.c h5pcc -o multiple-writes-test3 multiple-writes-test3.c h5pcc -o multiple-writes-test4 multiple-writes-test4.c h5pcc -o multiple-writes-test5 multiple-writes-test5.c - -parallel-writes: h5pcc -o parallel_write parallel_write.c server: h5pcc -o server test_server.c -native-writes: +natives: h5pcc -o native-write-basic native_write_basic.c h5pcc -o native-write-test1 native_write_test1.c h5pcc -o native-write-test2 native_write_test2.c h5pcc -o native-write-test3 native_write_test3.c h5pcc -o native-parallel-write native-parallel-write.c -read-tests: +reads: h5pcc -o read_test_1 read_test_1.c h5pcc -o read_test_2 read_test_2.c + h5pcc -o read_test_3 read_test_3.c + h5pcc -o native_read_1 native_read_1.c + h5pcc -o native_read_2 native_read_2.c clean: rm -rf multiple-writes-test1 multiple-writes-test2 read_test_1 @@ -30,4 +31,4 @@ clean: rm -rf parallel_write native-write-basic *.cfg rm -rf native-write-test1 native-write-test2 rm -rf native-write-basic native-write-test3 native-parallel-write - rm -rf read_test_1 read_test_2 + rm -rf read_test_1 read_test_2 read_test_3 native_read_1 native_read_2 diff --git a/test/compactor_write_tests/eff_file.h5 b/test/compactor_write_tests/eff_file.h5 Binary files differdeleted file mode 100644 index d1b4e1a..0000000 --- a/test/compactor_write_tests/eff_file.h5 +++ /dev/null diff --git a/test/compactor_write_tests/native-parallel-write-large.c b/test/compactor_write_tests/native-parallel-write-large.c new file mode 100644 index 0000000..d0a9b55 --- /dev/null +++ b/test/compactor_write_tests/native-parallel-write-large.c @@ -0,0 +1,144 @@ +#include <stdio.h> +#include <stdlib.h> +#include <string.h> +#include <assert.h> +#include "mpi.h" +#include "hdf5.h" + +#define NX 8 /* dataset dimensions */ +#define NY 8 +#define RANK 2 + + + +int main (int argc, char **argv){ + + const char filename[] = "eff_file.h5"; + hid_t file_id, file_id_new; + hid_t dataspaceID, dataspace2; + hid_t dset_id, dset_id_new; + hid_t fapl_id, dxpl_id, fapl_self_id; + + const unsigned int nelem = 60; + int *data = NULL; + unsigned int i = 0; + hsize_t dimsf[2]; + hsize_t count[2], offset[2]; + + int my_rank, my_size, ret; + int provided; + hid_t event_q, int_id; + + int num_requests = 0; + H5_status_t *status = NULL; + + MPI_Init_thread(&argc, &argv, MPI_THREAD_MULTIPLE, &provided); + if(MPI_THREAD_MULTIPLE != provided) { + fprintf(stderr, "MPI does not have MPI_THREAD_MULTIPLE support\n"); + exit(1); + } + + EFF_init (MPI_COMM_WORLD, MPI_INFO_NULL); + + MPI_Comm_rank (MPI_COMM_WORLD, &my_rank); + MPI_Comm_size (MPI_COMM_WORLD, &my_size); + + if (my_size > 8){ + fprintf (stderr, "Max only 8 processes in this code!\n"); + EFF_finalize(); + MPI_Finalize(); + } + fprintf(stderr, "APP processes = %d, my rank is %d\n", my_size, my_rank); + + fapl_id = H5Pcreate (H5P_FILE_ACCESS); + H5Pset_fapl_iod(fapl_id, MPI_COMM_WORLD, MPI_INFO_NULL); + + + event_q = H5EQcreate(fapl_id); + assert(event_q); + dimsf[0] = NX; + dimsf[1] = NY; + dataspaceID = H5Screate_simple(RANK, dimsf, NULL); + + if (!my_rank){ + + fapl_self_id = H5Pcreate (H5P_FILE_ACCESS); + H5Pset_fapl_iod(fapl_self_id, MPI_COMM_SELF, MPI_INFO_NULL); + + fprintf(stderr,"Rank %d creating a File\n", my_rank); + file_id = H5Fcreate(filename, H5F_ACC_TRUNC, H5P_DEFAULT, fapl_self_id); + fprintf(stderr,"Rank %d completed creating a file\n", my_rank); + fprintf(stderr,"Rank %d creating a dataset\n", my_rank); + dset_id = H5Dcreate(file_id, "D1" , H5T_NATIVE_INT, dataspaceID, + H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); + fprintf(stderr,"completed creating a dataset\n", my_rank); + H5Pclose(fapl_self_id); + H5Dclose(dset_id); + H5Fclose(file_id); + } + + MPI_Barrier(MPI_COMM_WORLD); + + file_id_new = H5Fopen(filename, H5F_ACC_RDWR, fapl_id ); + dset_id_new = H5Dopen(file_id_new, "D1", H5P_DEFAULT); + + fprintf (stderr, "%d : file_id : %d, dset_id: %d\n", + my_rank, + file_id_new, dset_id); + + count[0] = NY/my_size; + count[1] = 8; + offset[0] = my_rank * count[0]; + offset[1] = 0; + + dataspace2 = H5Screate_simple(RANK, count, NULL); + + H5Sselect_hyperslab(dataspaceID, + H5S_SELECT_SET, + offset, + NULL, + count, + NULL); + + + data = (int *) malloc(sizeof(int)*count[0]*count[1]); + for (i=0; i < count[0]*count[1]; i++) { + data[i] = my_rank + 10; + } + + + ret = H5Dwrite_ff(dset_id_new, + H5T_NATIVE_INT, + dataspace2, + dataspaceID, + H5P_DEFAULT, + data, + 0, + event_q); + assert(ret == 0); + + + + + + H5EQwait(event_q, &num_requests, &status); + free(status); + + H5Sclose(dataspaceID); + H5Sclose(dataspace2); + H5Pclose(fapl_id); + H5Dclose(dset_id_new); + + H5Fclose(file_id_new); + + H5EQclose (event_q); + + free(data); + fprintf(stderr, "\n*****************************************************************************************************************\n"); + fprintf(stderr, "Finalize EFF stack\n"); + fprintf(stderr, "*****************************************************************************************************************\n"); + EFF_finalize(); + MPI_Finalize(); + + return 0; +} diff --git a/test/compactor_write_tests/native-parallel-write.c b/test/compactor_write_tests/native-parallel-write.c index d0a9b55..66d7cc2 100644 --- a/test/compactor_write_tests/native-parallel-write.c +++ b/test/compactor_write_tests/native-parallel-write.c @@ -5,8 +5,8 @@ #include "mpi.h" #include "hdf5.h" -#define NX 8 /* dataset dimensions */ -#define NY 8 +#define NX 1024 /* dataset dimensions */ +#define NY 1024 #define RANK 2 @@ -87,7 +87,7 @@ int main (int argc, char **argv){ file_id_new, dset_id); count[0] = NY/my_size; - count[1] = 8; + count[1] = NY; offset[0] = my_rank * count[0]; offset[1] = 0; diff --git a/test/compactor_write_tests/native_read_1.c b/test/compactor_write_tests/native_read_1.c new file mode 100644 index 0000000..cf4ed0b --- /dev/null +++ b/test/compactor_write_tests/native_read_1.c @@ -0,0 +1,160 @@ +#include <stdio.h> +#include <stdlib.h> +#include <string.h> +#include <assert.h> +#include "mpi.h" +#include "hdf5.h" + +#define NX 16 +#define NY 8 +#define RANK 2 + + + +int main (int argc, char **argv){ + + const char filename[] = "eff_file.h5"; + hid_t file_id; + hid_t dataspace3, dataspace4; + hid_t dataspace7, dataspace8; + + hid_t dset_id; + hid_t fapl_id, dxpl_id; + + const unsigned int nelem = 60; + int *data2 = NULL, *data3 = NULL; + unsigned int i = 0; + hsize_t dimsf[2]; + hsize_t count[2], offset[2]; + int my_rank, my_size, ret; + int provided; + hid_t event_q, int_id; + int num_requests = 0; + H5_status_t *status = NULL; + MPI_Comm comm; + MPI_Info info; + + + MPI_Init_thread(&argc, &argv, MPI_THREAD_MULTIPLE, &provided); + if(MPI_THREAD_MULTIPLE != provided) { + fprintf(stderr, "MPI does not have MPI_THREAD_MULTIPLE support\n"); + exit(1); + } + + comm = MPI_COMM_WORLD; + info = MPI_INFO_NULL; + + EFF_init (comm, info); + MPI_Comm_rank (comm, &my_rank); + MPI_Comm_size (comm, &my_size); + + if (my_size > 1){ + fprintf(stderr, "APP processes = %d cannot be greater than 1 \n", my_size); + EFF_finalize(); + MPI_Finalize(); + } + + fapl_id = H5Pcreate (H5P_FILE_ACCESS); + H5Pset_fapl_iod(fapl_id, comm, info); + + event_q = H5EQcreate(fapl_id); + assert(event_q); + + file_id = H5Fcreate(filename, H5F_ACC_TRUNC, H5P_DEFAULT, fapl_id); + + dimsf[0] = NX; + dimsf[1] = NY; + + + dataspace3 = H5Screate_simple(RANK, dimsf, NULL); + dataspace7 = H5Screate_simple(RANK, dimsf, NULL); + + dset_id = H5Dcreate (file_id, "D1", H5T_NATIVE_INT, dataspace3, + H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); + assert(dset_id); + + + + count[0] = 8; + count[1] = 8; + offset[0] = 0; + offset[1] = 0; + H5Sselect_hyperslab(dataspace7, + H5S_SELECT_SET, + offset, + NULL, + count, + NULL); + + data3 = (int *) malloc (sizeof(int)*count[0]*count[1]); + for (i = 0; i < count[0]*count[1]; i++){ + data3[i] = 1024; + } + + dataspace8 = H5Screate_simple(RANK, count, NULL); + + + ret = H5Dwrite_ff(dset_id, + H5T_NATIVE_INT, + dataspace8, + dataspace7, + H5P_DEFAULT, + data3, + 0, + event_q); + assert(ret == 0); + + count[0] = 8; + count[1] = 1; + offset[0] = 0; + offset[1] = 0; + + + dataspace4 = H5Screate_simple(RANK, count, NULL); + + H5Sselect_hyperslab(dataspace3, + H5S_SELECT_SET, + offset, + NULL, + count, + NULL); + + + + data2 = (int *) malloc(sizeof(int)*count[0]*count[1]); + + ret = H5Dread_ff(dset_id, + H5T_NATIVE_INT, + dataspace4, + dataspace3, + H5P_DEFAULT, + data2, + 0, + event_q); + assert(ret == 0); + + H5Dclose(dset_id); + H5Sclose(dataspace3); H5Sclose(dataspace4); + H5Sclose(dataspace7); H5Sclose(dataspace8); + H5Pclose(fapl_id); + H5Fclose(file_id); + H5EQwait(event_q, &num_requests, &status); + free(status); + H5EQclose (event_q); + + for (i = 0; i < 8; i++){ + fprintf (stderr,"data2[%d]: %d\n", + i, data2[i]); + } + + free(data2); + free(data3); + fprintf(stderr, "\n*****************************************************************************************************************\n"); + fprintf(stderr, "Finalize EFF stack\n"); + fprintf(stderr, "*****************************************************************************************************************\n"); + + EFF_finalize(); + MPI_Finalize(); + + return 0; +} diff --git a/test/compactor_write_tests/native_read_2.c b/test/compactor_write_tests/native_read_2.c new file mode 100644 index 0000000..fa4ae6e --- /dev/null +++ b/test/compactor_write_tests/native_read_2.c @@ -0,0 +1,233 @@ +#include <stdio.h> +#include <stdlib.h> +#include <string.h> +#include <assert.h> +#include "mpi.h" +#include "hdf5.h" + +#define NX 16 +#define NY 8 +#define RANK 2 + + + +int main (int argc, char **argv){ + + const char filename[] = "eff_file.h5"; + hid_t file_id; + hid_t dataspace1, dataspace2; + hid_t dataspace3, dataspace4; + hid_t dataspace5, dataspace6; + hid_t dataspace7, dataspace8; + + hid_t dset_id; + hid_t fapl_id, dxpl_id; + + const unsigned int nelem = 60; + int *data = NULL, *data1 = NULL; + int *data2 = NULL, *data3 = NULL; + unsigned int i = 0; + hsize_t dimsf[2]; + hsize_t count[2], offset[2]; + int my_rank, my_size, ret; + int provided; + hid_t event_q, int_id; + int num_requests = 0; + H5_status_t *status = NULL; + MPI_Comm comm; + MPI_Info info; + + + MPI_Init_thread(&argc, &argv, MPI_THREAD_MULTIPLE, &provided); + if(MPI_THREAD_MULTIPLE != provided) { + fprintf(stderr, "MPI does not have MPI_THREAD_MULTIPLE support\n"); + exit(1); + } + + comm = MPI_COMM_WORLD; + info = MPI_INFO_NULL; + + EFF_init (comm, info); + MPI_Comm_rank (comm, &my_rank); + MPI_Comm_size (comm, &my_size); + + if (my_size > 1){ + fprintf(stderr, "APP processes = %d cannot be greater than 1 \n", my_size); + EFF_finalize(); + MPI_Finalize(); + } + + fapl_id = H5Pcreate (H5P_FILE_ACCESS); + H5Pset_fapl_iod(fapl_id, comm, info); + + event_q = H5EQcreate(fapl_id); + assert(event_q); + + file_id = H5Fcreate(filename, H5F_ACC_TRUNC, H5P_DEFAULT, fapl_id); + + dimsf[0] = NX; + dimsf[1] = NY; + + dataspace1 = H5Screate_simple(RANK, dimsf, NULL); + dataspace3 = H5Screate_simple(RANK, dimsf, NULL); + dataspace5 = H5Screate_simple(RANK, dimsf, NULL); + dataspace7 = H5Screate_simple(RANK, dimsf, NULL); + + dset_id = H5Dcreate (file_id, "D1", H5T_NATIVE_INT, dataspace1, + H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); + assert(dset_id); + + + + count[0] = 8; + count[1] = 8; + offset[0] = 0; + offset[1] = 0; + H5Sselect_hyperslab(dataspace7, + H5S_SELECT_SET, + offset, + NULL, + count, + NULL); + + data3 = (int *) malloc (sizeof(int)*count[0]*count[1]); + for (i = 0; i < count[0]*count[1]; i++){ + data3[i] = 1024; + } + + dataspace8 = H5Screate_simple(RANK, count, NULL); + + + ret = H5Dwrite_ff(dset_id, + H5T_NATIVE_INT, + dataspace8, + dataspace7, + H5P_DEFAULT, + data3, + 0, + event_q); + assert(ret == 0); + + /*Make sure the above write completes for testing + partial read!*/ + H5EQwait(event_q, &num_requests, &status); + + count[0] = 1; + count[1] = 8; + offset[0] = 0; + offset[1] = 0; + + dataspace2 = H5Screate_simple(RANK, count, NULL); + + H5Sselect_hyperslab(dataspace1, + H5S_SELECT_SET, + offset, + NULL, + count, + NULL); + + data = (int *) malloc (sizeof(int)*count[0]*count[1]); + for (i = 0; i < count[0]*count[1]; i++){ + data[i] = 10; + } + + ret = H5Dwrite_ff(dset_id, + H5T_NATIVE_INT, + dataspace2, + dataspace1, + H5P_DEFAULT, + data, + 0, + event_q); + assert(ret == 0); + + count[0] = 8; + count[1] = 1; + offset[0] = 0; + offset[1] = 0; + + + dataspace4 = H5Screate_simple(RANK, count, NULL); + + H5Sselect_hyperslab(dataspace3, + H5S_SELECT_SET, + offset, + NULL, + count, + NULL); + + + + data2 = (int *) malloc(sizeof(int)*count[0]*count[1]); + + ret = H5Dread_ff(dset_id, + H5T_NATIVE_INT, + dataspace4, + dataspace3, + H5P_DEFAULT, + data2, + 0, + event_q); + assert(ret == 0); + + count[0] = 4; + count[1] = 4; + offset[0] = 2; + offset[1] = 0; + + + H5Sselect_hyperslab(dataspace5, + H5S_SELECT_SET, + offset, + NULL, + count, + NULL); + + dataspace6 = H5Screate_simple(RANK, count, NULL); + + data3 = (int *) malloc(sizeof(int)*count[0]*count[1]); + for (i = 0; i < count[0]*count[1]; i++){ + data3[i] = 11; + } + + ret = H5Dwrite_ff(dset_id, + H5T_NATIVE_INT, + dataspace6, + dataspace5, + H5P_DEFAULT, + data3, + 0, + event_q); + assert(ret == 0); + + + + H5Dclose(dset_id); + H5Sclose(dataspace1); H5Sclose(dataspace2); + H5Sclose(dataspace3); H5Sclose(dataspace4); + H5Sclose(dataspace5); H5Sclose(dataspace6); + H5Sclose(dataspace7); H5Sclose(dataspace8); + H5Pclose(fapl_id); + H5Fclose(file_id); + H5EQwait(event_q, &num_requests, &status); + free(status); + H5EQclose (event_q); + + for (i = 0; i < 8; i++){ + fprintf (stderr,"data2[%d]: %d\n", + i, data2[i]); + } + + free(data); + free(data1); + free(data2); + free(data3); + fprintf(stderr, "\n*****************************************************************************************************************\n"); + fprintf(stderr, "Finalize EFF stack\n"); + fprintf(stderr, "*****************************************************************************************************************\n"); + + EFF_finalize(); + MPI_Finalize(); + + return 0; +} diff --git a/test/compactor_write_tests/native_write_test1.c b/test/compactor_write_tests/native_write_test1.c index b9a54a7..02c8554 100644 --- a/test/compactor_write_tests/native_write_test1.c +++ b/test/compactor_write_tests/native_write_test1.c @@ -6,7 +6,7 @@ #include "hdf5.h" #define NX 16 /* dataset dimensions */ -#define NY 8 +#define NY 16 #define RANK 2 /*Entire write gets replaced @@ -67,12 +67,12 @@ int main (int argc, char **argv){ dataspaceID = H5Screate_simple(RANK, dimsf, NULL); - - dset_id = H5Dcreate(file_id, "D1", H5T_NATIVE_INT,dataspaceID, + + dset_id = H5Dcreate(file_id, "D1", H5T_NATIVE_INT,dataspaceID, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); - count[0] = 8; - count[1] = 8; + count[0] = NX; + count[1] = NY; offset[0] = 0; offset[1] = 0; diff --git a/test/compactor_write_tests/native_write_test3.c b/test/compactor_write_tests/native_write_test3.c index c5f7d15..2dafe73 100644 --- a/test/compactor_write_tests/native_write_test3.c +++ b/test/compactor_write_tests/native_write_test3.c @@ -5,8 +5,8 @@ #include "mpi.h" #include "hdf5.h" -#define NX 16 /* dataset dimensions */ -#define NY 8 +#define NX 256 /* dataset dimensions */ +#define NY 256 #define RANK 2 @@ -75,8 +75,8 @@ int main (int argc, char **argv){ dset_id = H5Dcreate(file_id, "D1", H5T_NATIVE_INT,dataspaceID, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); - count[0] = 4; - count[1] = 4; + count[0] = 256; + count[1] = 256; offset[0] = 0; offset[1] = 0; @@ -108,8 +108,8 @@ int main (int argc, char **argv){ event_q); assert(ret == 0); - count[0] = 4; - count[1] = 4; + count[0] = 8; + count[1] = 8; offset[0] = 6; offset[1] = 0; @@ -146,8 +146,8 @@ int main (int argc, char **argv){ assert(ret == 0); - count[0] = 4; - count[1] = 4; + count[0] = 8; + count[1] = 8; offset[0] = 3; offset[1] = 0; diff --git a/test/compactor_write_tests/read_test_2.c b/test/compactor_write_tests/read_test_2.c index eee7313..4c0f75c 100644 --- a/test/compactor_write_tests/read_test_2.c +++ b/test/compactor_write_tests/read_test_2.c @@ -17,8 +17,6 @@ int main (int argc, char **argv){ hid_t file_id; hid_t dataspace1, dataspace2; hid_t dataspace3, dataspace4; - hid_t dataspace5, dataspace6; - hid_t dataspace7, dataspace8; hid_t dset_id; hid_t fapl_id, dxpl_id; @@ -70,9 +68,7 @@ int main (int argc, char **argv){ dataspace1 = H5Screate_simple(RANK, dimsf, NULL); dataspace3 = H5Screate_simple(RANK, dimsf, NULL); - dataspace5 = H5Screate_simple(RANK, dimsf, NULL); - dataspace7 = H5Screate_simple(RANK, dimsf, NULL); - + dset_id = H5Dcreate_ff (file_id, "D1", H5T_NATIVE_INT, dataspace1, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT, 0, event_q); assert(dset_id); @@ -90,6 +86,7 @@ int main (int argc, char **argv){ NULL, count, NULL); + data = (int *) malloc (sizeof(int)*count[0]*count[1]); for (i = 0; i < count[0]*count[1]; i++){ @@ -106,81 +103,15 @@ int main (int argc, char **argv){ event_q); assert(ret == 0); - - count[0] = 4; - count[1] = 8; - offset[0] = 4; - offset[1] = 0; - - - - data1 = (int *) malloc(sizeof(int)*count[0]*count[1]); - for (i = 0; i < count[0]*count[1]; i++){ - data1[i] = 11; - } - - dataspace4 = H5Screate_simple(RANK, count, NULL); - - H5Sselect_hyperslab(dataspace3, - H5S_SELECT_SET, - offset, - NULL, - count, - NULL); - - - ret = H5Dwrite_ff(dset_id, - H5T_NATIVE_INT, - dataspace4, - dataspace3, - H5P_DEFAULT, - data1, - 0, - event_q); - assert(ret == 0); - - - count[0] = 2; - count[1] = 8; - offset[0] = 5; - offset[1] = 0; - - data3 = (int *) malloc(sizeof(int)*count[0]*count[1]); - for (i = 0; i < count[0]*count[1]; i++){ - data3[i] = 100; - } - - dataspace8 = H5Screate_simple(RANK, count, NULL); - - H5Sselect_hyperslab(dataspace7, - H5S_SELECT_SET, - offset, - NULL, - count, - NULL); - - - - ret = H5Dwrite_ff(dset_id, - H5T_NATIVE_INT, - dataspace8, - dataspace7, - H5P_DEFAULT, - data3, - 0, - event_q); - assert(ret == 0); - - count[0] = 8; - count[1] = 8; + count[1] = 1; offset[0] = 0; offset[1] = 0; - dataspace6 = H5Screate_simple(RANK, count, NULL); + dataspace4 = H5Screate_simple(RANK, count, NULL); - H5Sselect_hyperslab(dataspace5, + H5Sselect_hyperslab(dataspace3, H5S_SELECT_SET, offset, NULL, @@ -189,13 +120,12 @@ int main (int argc, char **argv){ - data2 = (int *) malloc(sizeof(int)*count[0]*count[1]); ret = H5Dread_ff(dset_id, H5T_NATIVE_INT, - dataspace6, - dataspace5, + dataspace4, + dataspace3, H5P_DEFAULT, data2, 0, @@ -208,7 +138,6 @@ int main (int argc, char **argv){ assert(H5Dclose_ff(dset_id, event_q) == 0); H5Sclose(dataspace1); H5Sclose(dataspace2); H5Sclose(dataspace3); H5Sclose(dataspace4); - H5Sclose(dataspace5); H5Sclose(dataspace6); H5Pclose(fapl_id); assert(H5Fclose_ff(file_id, event_q)== 0); H5EQwait(event_q, &num_requests, &status); diff --git a/test/compactor_write_tests/read_test_3.c b/test/compactor_write_tests/read_test_3.c new file mode 100644 index 0000000..220bff6 --- /dev/null +++ b/test/compactor_write_tests/read_test_3.c @@ -0,0 +1,197 @@ +#include <stdio.h> +#include <stdlib.h> +#include <string.h> +#include <assert.h> +#include "mpi.h" +#include "hdf5.h" + +#define NX 16 +#define NY 8 +#define RANK 2 + + + +int main (int argc, char **argv){ + + const char filename[] = "eff_file.h5"; + hid_t file_id; + hid_t dataspace1, dataspace2; + hid_t dataspace3, dataspace4; + hid_t dataspace5, dataspace6; + + hid_t dset_id; + hid_t fapl_id, dxpl_id; + + const unsigned int nelem = 60; + int *data = NULL, *data1 = NULL; + int *data2 = NULL, *data3 = NULL; + unsigned int i = 0; + hsize_t dimsf[2]; + hsize_t count[2], offset[2]; + int my_rank, my_size, ret; + int provided; + hid_t event_q, int_id; + int num_requests = 0; + H5_status_t *status = NULL; + MPI_Comm comm; + MPI_Info info; + + + MPI_Init_thread(&argc, &argv, MPI_THREAD_MULTIPLE, &provided); + if(MPI_THREAD_MULTIPLE != provided) { + fprintf(stderr, "MPI does not have MPI_THREAD_MULTIPLE support\n"); + exit(1); + } + + comm = MPI_COMM_WORLD; + info = MPI_INFO_NULL; + + EFF_init (comm, info); + MPI_Comm_rank (comm, &my_rank); + MPI_Comm_size (comm, &my_size); + + if (my_size > 1){ + fprintf(stderr, "APP processes = %d cannot be greater than 1 \n", my_size); + EFF_finalize(); + MPI_Finalize(); + } + + fapl_id = H5Pcreate (H5P_FILE_ACCESS); + H5Pset_fapl_iod(fapl_id, comm, info); + + event_q = H5EQcreate(fapl_id); + assert(event_q); + + file_id = H5Fcreate_ff(filename, H5F_ACC_TRUNC, H5P_DEFAULT, fapl_id, event_q); + assert(file_id); + + dimsf[0] = NX; + dimsf[1] = NY; + + dataspace1 = H5Screate_simple(RANK, dimsf, NULL); + dataspace3 = H5Screate_simple(RANK, dimsf, NULL); + dataspace5 = H5Screate_simple(RANK, dimsf, NULL); + + dset_id = H5Dcreate_ff (file_id, "D1", H5T_NATIVE_INT, dataspace1, + H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT, 0, event_q); + assert(dset_id); + + count[0] = 1; + count[1] = 8; + offset[0] = 0; + offset[1] = 0; + + dataspace2 = H5Screate_simple(RANK, count, NULL); + + H5Sselect_hyperslab(dataspace1, + H5S_SELECT_SET, + offset, + NULL, + count, + NULL); + + data = (int *) malloc (sizeof(int)*count[0]*count[1]); + + for (i = 0; i < count[0]*count[1]; i++){ + data[i] = 10; + } + + ret = H5Dwrite_ff(dset_id, + H5T_NATIVE_INT, + dataspace2, + dataspace1, + H5P_DEFAULT, + data, + 0, + event_q); + assert(ret == 0); + + count[0] = 8; + count[1] = 1; + offset[0] = 0; + offset[1] = 0; + + + dataspace4 = H5Screate_simple(RANK, count, NULL); + + H5Sselect_hyperslab(dataspace3, + H5S_SELECT_SET, + offset, + NULL, + count, + NULL); + + + + data2 = (int *) malloc(sizeof(int)*count[0]*count[1]); + + ret = H5Dread_ff(dset_id, + H5T_NATIVE_INT, + dataspace4, + dataspace3, + H5P_DEFAULT, + data2, + 0, + event_q); + assert(ret == 0); + + count[0] = 4; + count[1] = 4; + offset[0] = 2; + offset[1] = 0; + + + H5Sselect_hyperslab(dataspace5, + H5S_SELECT_SET, + offset, + NULL, + count, + NULL); + + dataspace6 = H5Screate_simple(RANK, count, NULL); + + data3 = (int *) malloc(sizeof(int)*count[0]*count[1]); + for (i = 0; i < count[0]*count[1]; i++){ + data3[i] = 11; + } + + ret = H5Dwrite_ff(dset_id, + H5T_NATIVE_INT, + dataspace6, + dataspace5, + H5P_DEFAULT, + data3, + 0, + event_q); + assert(ret == 0); + + + + assert(H5Dclose_ff(dset_id, event_q) == 0); + H5Sclose(dataspace1); H5Sclose(dataspace2); + H5Sclose(dataspace3); H5Sclose(dataspace4); + H5Sclose(dataspace5); H5Sclose(dataspace6); + H5Pclose(fapl_id); + assert(H5Fclose_ff(file_id, event_q)== 0); + H5EQwait(event_q, &num_requests, &status); + free(status); + H5EQclose (event_q); + + for (i = 0; i < 8; i++){ + fprintf (stderr,"data2[%d]: %d\n", + i, data2[i]); + } + + free(data); + free(data1); + free(data2); + free(data3); + fprintf(stderr, "\n*****************************************************************************************************************\n"); + fprintf(stderr, "Finalize EFF stack\n"); + fprintf(stderr, "*****************************************************************************************************************\n"); + + EFF_finalize(); + MPI_Finalize(); + + return 0; +} |