diff options
author | Dana Robinson <derobins@hdfgroup.org> | 2019-02-22 19:08:12 (GMT) |
---|---|---|
committer | Dana Robinson <derobins@hdfgroup.org> | 2019-02-22 19:08:12 (GMT) |
commit | e4b71d49a12d384e89931a620428e950dd98e4e8 (patch) | |
tree | 94798cf8cb723798fc7fda00a281b712ccdfb427 | |
parent | 3964f612eba8872d6fc8778f2523fd4bce47f649 (diff) | |
parent | 0e402e436d0c58acc72e45ab6153d5662b3148e0 (diff) | |
download | hdf5-e4b71d49a12d384e89931a620428e950dd98e4e8.zip hdf5-e4b71d49a12d384e89931a620428e950dd98e4e8.tar.gz hdf5-e4b71d49a12d384e89931a620428e950dd98e4e8.tar.bz2 |
Merge pull request #1574 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:hdf5_rados to hdf5_rados
* commit '0e402e436d0c58acc72e45ab6153d5662b3148e0':
Updated the tests to use mobject.
Added a RADOS/mobject #ifdef switch.
Moved the rados_stat() modifications into a helper function.
Finished implementation of RADOS wrappers for calls not implemented in mobject.
* Added a rados_read() wrapper function (still uses rados_read()). * Some cleanup in the write wrapper.
rados_write_full calls now use write_ops.
Added a helper function to wrap rados_write_full().
Both rados_stats calls are wrapped. You can #define OLD_RADOS_CALLS to enable the old way of doing things.
Converted one of the stats calls to use a read op instead.
* Added a script to run the RADOS examples in order. * Updated BRANCH.txt with useful information about building and testing. * Makefile.am now installs everything you need as well as the test script.
-rw-r--r-- | BRANCH.txt | 92 | ||||
-rw-r--r-- | examples/Makefile.am | 3 | ||||
-rw-r--r-- | examples/h5rados_dset_create.c | 2 | ||||
-rw-r--r-- | examples/h5rados_dset_open.c | 2 | ||||
-rw-r--r-- | examples/h5rados_dset_read.c | 2 | ||||
-rw-r--r-- | examples/h5rados_dset_rpartial.c | 2 | ||||
-rw-r--r-- | examples/h5rados_dset_wpartial.c | 2 | ||||
-rw-r--r-- | examples/h5rados_dset_write.c | 2 | ||||
-rw-r--r-- | examples/h5rados_example.h | 8 | ||||
-rw-r--r-- | examples/h5rados_file_create.c | 2 | ||||
-rw-r--r-- | examples/h5rados_file_open.c | 2 | ||||
-rw-r--r-- | examples/h5rados_group_create.c | 2 | ||||
-rw-r--r-- | examples/h5rados_group_open.c | 2 | ||||
-rw-r--r-- | examples/run_mobject_examples.sh | 48 | ||||
-rwxr-xr-x | examples/run_rados_examples.sh | 71 | ||||
-rw-r--r-- | src/H5VLrados.c | 204 | ||||
-rw-r--r-- | src/H5VLrados_public.h | 4 |
17 files changed, 415 insertions, 35 deletions
@@ -1,15 +1,87 @@ -autotools_rework +This branch is a copy of Neil's RADOS VOL connector branch. +Very few changes have been made to the branch so it stays +as a 'known good' version of the connector. -The purpose of this branch is to make changes to the autotools files, -particularly configure.ac. This will remove a lot of old cruft and update -the input files. This effort was started in January 2015 and should be -completed within the year. +This is based off the ancient 'vol' branch and is wildy +out of sync with develop. You will not be able to move +the RADOS VOL connector built here to HDF5 1.12.0 without +a lot of surgery. The rados_vol branch in this repository +is kept in sync with develop and is probably the one +you want for that. -This branch tracks the trunk. +Note that this is a dead branch, so no effort has been +made to keep the MANIFEST sane, etc. -Dana Robinson and Allen Byrne are the owners of this branch. +************ +* BUILDING * +************ -This branch should be closed when the bulk of the autotools work is -complete and has been merged into the trunk and 1.8 branch. This -work should be completed by mid-2015. +RADOS: + +The code for the RADOS VOL connector lies entirely in +the H5VLrados* files in the src directory. The connector +is built as a static part of the library. + +I build this branch on Ubuntu, with the system default +librados-dev package and its dependencies installed. I use +the autotools and the only thing I have to specify is the +linker flags: + +LDFLAGS="-L/path/to/librados -lrados" + +YMMV, but the autotools do no librados hunting so you may +need to specify things it can't figure out on its own. + +MOBJECT: + +You'll need to be able to find the headers and libs for +mobject-store. You do not need the RADOS libraries. + +On jelly (THG), this will work: + +export SPACK_ROOT=/mnt/hdf/jsoumagne/spack +source $SPACK_ROOT/share/spack/setup-env.sh +module load GCC +source <(spack module tcl loads --dependencies mobject) + +You will also need to define HDF5_USE_MOBJECT in CPPFLAGS. +This switches between the RADOS and mobject headers. + + +*********** +* TESTING * +*********** + +There are no tests for the RADOS VOL connector in the main +library, so running 'make check' won't provide much +information. + +RADOS: + +Once the library has been built, you can run some smoke +checks by running 'make install' and going to the +share/hdf5_examples/c/ directory and running the +run_rados_examples.sh script found there. That will +create a small pool (or clear it out if it exists) +and run all the example scripts in a sane order. + +*** YOU WILL NEED TO COPY YOUR ceph.conf FILE +*** INTO THIS DIRECTORY FIRST!!! + +In case it's not obvious, you'll need an active Ceph +cluster to run the tests :) + +MOBJECT: + +Same as above, only the script's name is run_mobject_examples.sh. + +You can probably ignore any sdskv_put warnings as long as the +examples pass. + +The tests are hard-coded to use /tmp/mobject-clust-test.gid and +this can be changed in h5rados_example.h. + +So to start mobject-server: + +mobject-server-daemon na+sm /tmp/mobject-cluster-test.gid diff --git a/examples/Makefile.am b/examples/Makefile.am index 323541f..7e56f86 100644 --- a/examples/Makefile.am +++ b/examples/Makefile.am @@ -63,7 +63,8 @@ INSTALL_FILES = h5_write.c h5_read.c h5_extend_write.c h5_chunk_read.c \ h5rados_file_create.c h5rados_file_open.c h5rados_group_create.c \ h5rados_group_open.c h5rados_dset_create.c \ h5rados_dset_open.c h5rados_dset_write.c h5rados_dset_read.c \ - h5rados_dset_wpartial.c h5rados_dset_rpartial.c + h5rados_dset_wpartial.c h5rados_dset_rpartial.c \ + h5rados_example.h run_rados_examples.sh run_mobject_examples.sh diff --git a/examples/h5rados_dset_create.c b/examples/h5rados_dset_create.c index 0e14a7f..2ec6bfa 100644 --- a/examples/h5rados_dset_create.c +++ b/examples/h5rados_dset_create.c @@ -14,7 +14,7 @@ int main(int argc, char *argv[]) { if(rados_create(&cluster, NULL) < 0) ERROR; - if(rados_conf_read_file(cluster, "ceph.conf") < 0) + if(rados_conf_read_file(cluster, CEPH_CONFIG_FILE) < 0) ERROR; /* Initialize VOL */ diff --git a/examples/h5rados_dset_open.c b/examples/h5rados_dset_open.c index 19e29ed..a0d4fa7 100644 --- a/examples/h5rados_dset_open.c +++ b/examples/h5rados_dset_open.c @@ -15,7 +15,7 @@ int main(int argc, char *argv[]) { if(rados_create(&cluster, NULL) < 0) ERROR; - if(rados_conf_read_file(cluster, "ceph.conf") < 0) + if(rados_conf_read_file(cluster, CEPH_CONFIG_FILE) < 0) ERROR; /* Initialize VOL */ diff --git a/examples/h5rados_dset_read.c b/examples/h5rados_dset_read.c index fc7292c..5dbb91d 100644 --- a/examples/h5rados_dset_read.c +++ b/examples/h5rados_dset_read.c @@ -18,7 +18,7 @@ int main(int argc, char *argv[]) { if(rados_create(&cluster, NULL) < 0) ERROR; - if(rados_conf_read_file(cluster, "ceph.conf") < 0) + if(rados_conf_read_file(cluster, CEPH_CONFIG_FILE) < 0) ERROR; /* Initialize VOL */ diff --git a/examples/h5rados_dset_rpartial.c b/examples/h5rados_dset_rpartial.c index 622b961..f6faad7 100644 --- a/examples/h5rados_dset_rpartial.c +++ b/examples/h5rados_dset_rpartial.c @@ -28,7 +28,7 @@ int main(int argc, char *argv[]) { if(rados_create(&cluster, NULL) < 0) ERROR; - if(rados_conf_read_file(cluster, "ceph.conf") < 0) + if(rados_conf_read_file(cluster, CEPH_CONFIG_FILE) < 0) ERROR; /* Initialize VOL */ diff --git a/examples/h5rados_dset_wpartial.c b/examples/h5rados_dset_wpartial.c index bb53982..048625e 100644 --- a/examples/h5rados_dset_wpartial.c +++ b/examples/h5rados_dset_wpartial.c @@ -28,7 +28,7 @@ int main(int argc, char *argv[]) { if(rados_create(&cluster, NULL) < 0) ERROR; - if(rados_conf_read_file(cluster, "ceph.conf") < 0) + if(rados_conf_read_file(cluster, CEPH_CONFIG_FILE) < 0) ERROR; /* Initialize VOL */ diff --git a/examples/h5rados_dset_write.c b/examples/h5rados_dset_write.c index dad96fa..17e6898 100644 --- a/examples/h5rados_dset_write.c +++ b/examples/h5rados_dset_write.c @@ -18,7 +18,7 @@ int main(int argc, char *argv[]) { if(rados_create(&cluster, NULL) < 0) ERROR; - if(rados_conf_read_file(cluster, "ceph.conf") < 0) + if(rados_conf_read_file(cluster, CEPH_CONFIG_FILE) < 0) ERROR; /* Initialize VOL */ diff --git a/examples/h5rados_example.h b/examples/h5rados_example.h index 4516b15..8da9487 100644 --- a/examples/h5rados_example.h +++ b/examples/h5rados_example.h @@ -3,7 +3,6 @@ #include <stdlib.h> #include <mpi.h> #include <hdf5.h> -#include <rados/librados.h> #include <H5VLrados_public.h> /* Macros for printing standard messages and issuing errors */ @@ -12,3 +11,10 @@ #define ERROR do {FAILED(); AT(); goto error;} while(0) #define PRINTF_ERROR(...) do {FAILED(); AT(); printf(" " __VA_ARGS__); printf("\n"); goto error;} while(0) +/* Config file */ +#ifdef HDF5_USE_MOBJECT +#define CEPH_CONFIG_FILE "/tmp/mobject-cluster-test.gid" +#else +#define CEPH_CONFIG_FILE "ceph.conf" +#endif + diff --git a/examples/h5rados_file_create.c b/examples/h5rados_file_create.c index 493be18..04101b3 100644 --- a/examples/h5rados_file_create.c +++ b/examples/h5rados_file_create.c @@ -12,7 +12,7 @@ int main(int argc, char *argv[]) { if(rados_create(&cluster, NULL) < 0) ERROR; - if(rados_conf_read_file(cluster, "ceph.conf") < 0) + if(rados_conf_read_file(cluster, CEPH_CONFIG_FILE) < 0) ERROR; /* Initialize VOL */ diff --git a/examples/h5rados_file_open.c b/examples/h5rados_file_open.c index 176d26e..881ab10 100644 --- a/examples/h5rados_file_open.c +++ b/examples/h5rados_file_open.c @@ -12,7 +12,7 @@ int main(int argc, char *argv[]) { if(rados_create(&cluster, NULL) < 0) ERROR; - if(rados_conf_read_file(cluster, "ceph.conf") < 0) + if(rados_conf_read_file(cluster, CEPH_CONFIG_FILE) < 0) ERROR; /* Initialize VOL */ diff --git a/examples/h5rados_group_create.c b/examples/h5rados_group_create.c index fcfbbc0..68c6a6d 100644 --- a/examples/h5rados_group_create.c +++ b/examples/h5rados_group_create.c @@ -12,7 +12,7 @@ int main(int argc, char *argv[]) { if(rados_create(&cluster, NULL) < 0) ERROR; - if(rados_conf_read_file(cluster, "ceph.conf") < 0) + if(rados_conf_read_file(cluster, CEPH_CONFIG_FILE) < 0) ERROR; /* Initialize VOL */ diff --git a/examples/h5rados_group_open.c b/examples/h5rados_group_open.c index 3339480..4fde06c 100644 --- a/examples/h5rados_group_open.c +++ b/examples/h5rados_group_open.c @@ -12,7 +12,7 @@ int main(int argc, char *argv[]) { if(rados_create(&cluster, NULL) < 0) ERROR; - if(rados_conf_read_file(cluster, "ceph.conf") < 0) + if(rados_conf_read_file(cluster, CEPH_CONFIG_FILE) < 0) ERROR; /* Initialize VOL */ diff --git a/examples/run_mobject_examples.sh b/examples/run_mobject_examples.sh new file mode 100644 index 0000000..767387d --- /dev/null +++ b/examples/run_mobject_examples.sh @@ -0,0 +1,48 @@ +#!/bin/bash + +# Build mobject examples. +# Assumes mobject stuff can be found +echo "Building mobject examples" +../../../bin/h5pcc -DHDF5_USE_MOBJECT -o h5rados_file_create h5rados_file_create.c +../../../bin/h5pcc -DHDF5_USE_MOBJECT -o h5rados_file_open h5rados_file_open.c +../../../bin/h5pcc -DHDF5_USE_MOBJECT -o h5rados_dset_create h5rados_dset_create.c +../../../bin/h5pcc -DHDF5_USE_MOBJECT -o h5rados_dset_open h5rados_dset_open.c +../../../bin/h5pcc -DHDF5_USE_MOBJECT -o h5rados_group_create h5rados_group_create.c +../../../bin/h5pcc -DHDF5_USE_MOBJECT -o h5rados_group_open h5rados_group_open.c +../../../bin/h5pcc -DHDF5_USE_MOBJECT -o h5rados_dset_write h5rados_dset_write.c +../../../bin/h5pcc -DHDF5_USE_MOBJECT -o h5rados_dset_read h5rados_dset_read.c + +../../../bin/h5pcc -DHDF5_USE_MOBJECT -o h5rados_dset_rpartial h5rados_dset_rpartial.c +../../../bin/h5pcc -DHDF5_USE_MOBJECT -o h5rados_dset_wpartial h5rados_dset_wpartial.c +echo "DONE" +echo + +# Run the mobject examples +echo "Running mobject examples" +# File create/open +echo "./h5rados_file_create testfile" +mpiexec -n 2 ./h5rados_file_create testfile +echo "./h5rados_file_open testfile" +mpiexec -n 2 ./h5rados_file_open testfile +# Dataset create/open +echo "./h5rados_dset_create testfile testdset" +mpiexec -n 2 ./h5rados_dset_create testfile testdset +echo "./h5rados_dset_open testfile testdset" +mpiexec -n 2 ./h5rados_dset_open testfile testdset +# Group create/open +echo "./h5rados_group_create testfile testgroup" +mpiexec -n 2 ./h5rados_group_create testfile testgroup +echo "./h5rados_group_open testfile testgroup" +mpiexec -n 2 ./h5rados_group_open testfile testgroup +# Dataset read/write +echo "./h5rados_dset_write testfile testdset" +mpiexec -n 2 ./h5rados_dset_write testfile testdset +echo "./h5rados_dset_read testfile testdset" +mpiexec -n 2 ./h5rados_dset_read testfile testdset +# Dataset read/write (partial) +echo "./h5rados_dset_wpartial testfile testdset" +mpiexec -n 2 ./h5rados_dset_wpartial testfile testdset +echo "./h5rados_dset_rpartial testfile testdset" +mpiexec -n 2 ./h5rados_dset_rpartial testfile testdset +echo + diff --git a/examples/run_rados_examples.sh b/examples/run_rados_examples.sh new file mode 100755 index 0000000..7782a56 --- /dev/null +++ b/examples/run_rados_examples.sh @@ -0,0 +1,71 @@ +#!/bin/bash + +# Build RADOS examples. +# Assumes RADOS can be found in the usual location. +echo "Building RADOS examples" +../../../bin/h5pcc -o h5rados_file_create h5rados_file_create.c -lrados +../../../bin/h5pcc -o h5rados_file_open h5rados_file_open.c -lrados +../../../bin/h5pcc -o h5rados_dset_create h5rados_dset_create.c -lrados +../../../bin/h5pcc -o h5rados_dset_open h5rados_dset_open.c -lrados +../../../bin/h5pcc -o h5rados_group_create h5rados_group_create.c -lrados +../../../bin/h5pcc -o h5rados_group_open h5rados_group_open.c -lrados +../../../bin/h5pcc -o h5rados_dset_write h5rados_dset_write.c -lrados +../../../bin/h5pcc -o h5rados_dset_read h5rados_dset_read.c -lrados + +../../../bin/h5pcc -o h5rados_dset_rpartial h5rados_dset_rpartial.c -lrados +../../../bin/h5pcc -o h5rados_dset_wpartial h5rados_dset_wpartial.c -lrados +echo "DONE" +echo + +# Create the pool +echo "Creating the test pool" +echo "(Ceph makes it hard to delete pools, so we never do that" +echo "and you may see a message that the pool already exists.)" +ceph osd pool create mypool 128 +echo + +# Dump some Ceph info +echo "Pool status at start of tests:" +rados -p mypool ls +echo + +# Clean out the test pool +echo "Cleaning out the test pool" +for i in $(rados -p mypool ls); do echo $i; rados -p mypool rm $i; done +echo + +# Run the RADOS examples +echo "Running RADOS examples" +# File create/open +echo "./h5rados_file_create testfile" +mpiexec -n 2 ./h5rados_file_create testfile +echo "./h5rados_file_open testfile" +mpiexec -n 2 ./h5rados_file_open testfile +# Dataset create/open +echo "./h5rados_dset_create testfile testdset" +mpiexec -n 2 ./h5rados_dset_create testfile testdset +echo "./h5rados_dset_open testfile testdset" +mpiexec -n 2 ./h5rados_dset_open testfile testdset +# Group create/open +echo "./h5rados_group_create testfile testgroup" +mpiexec -n 2 ./h5rados_group_create testfile testgroup +echo "./h5rados_group_open testfile testgroup" +mpiexec -n 2 ./h5rados_group_open testfile testgroup +# Dataset read/write +echo "./h5rados_dset_write testfile testdset" +mpiexec -n 2 ./h5rados_dset_write testfile testdset +echo "./h5rados_dset_read testfile testdset" +mpiexec -n 2 ./h5rados_dset_read testfile testdset +# Dataset read/write (partial) +echo "./h5rados_dset_wpartial testfile testdset" +mpiexec -n 2 ./h5rados_dset_wpartial testfile testdset +echo "./h5rados_dset_rpartial testfile testdset" +mpiexec -n 2 ./h5rados_dset_rpartial testfile testdset +echo + + +# Dump the Ceph info again +echo "Pool status at end of tests:" +rados -p mypool ls +echo + diff --git a/src/H5VLrados.c b/src/H5VLrados.c index 76a865e..0ee5c92 100644 --- a/src/H5VLrados.c +++ b/src/H5VLrados.c @@ -200,6 +200,11 @@ static herr_t H5VL_rados_file_flush(H5VL_rados_file_t *file); static herr_t H5VL_rados_file_close_helper(H5VL_rados_file_t *file, hid_t dxpl_id, void **req); +/* read/write_op equivalents for some RADOS calls */ +static int H5VL_rados_read(rados_ioctx_t io, const char *oid, char *buf, size_t len, uint64_t off); +static int H5VL_rados_write_full(rados_ioctx_t io, const char *oid, const char *buf, size_t len); +static int H5VL_rados_stat(rados_ioctx_t io, const char *oid, uint64_t *psize, time_t * pmtime); + static herr_t H5VL_rados_link_read(H5VL_rados_group_t *grp, const char *name, H5VL_rados_link_val_t *val); static herr_t H5VL_rados_link_write(H5VL_rados_group_t *grp, const char *name, @@ -348,6 +353,179 @@ rados_ioctx_t ioctx_g; hbool_t ioctx_init_g = FALSE; +/*------------------------------------------------------------------------- + * Function: H5VL_rados_read + * + * Purpose: Recreates rados_read(). We are trying to use all read_op + * calls and this lets us do that without duplicating all + * the RADOS boilerplate. + * + * Return: Success: 0 + * Failure: -1 + * + * Programmer: Dana Robinson + * February, 2019 + * + *------------------------------------------------------------------------- + */ +static int +H5VL_rados_read(rados_ioctx_t io, const char *oid, char *buf, size_t len, uint64_t off) +{ + int ret = 0; + int ret_value = 0; + + FUNC_ENTER_NOAPI_NOINIT + +#ifdef OLD_RADOS_CALLS + /* Read data from the object */ + if((ret = rados_read(io, oid, buf, len, off)) < 0) + HGOTO_ERROR(H5E_DATASET, H5E_CANTDECODE, (-1), "can't read metadata from dataset: %s", strerror(-ret)) +#else +{ + rados_read_op_t read_op; + hbool_t read_op_init = FALSE; + size_t bytes_read = 0; + int prval; + + /* Create read op */ + if(NULL == (read_op = rados_create_read_op())) + HGOTO_ERROR(H5E_SYM, H5E_CANTINIT, (-1), "can't create read operation") + read_op_init = TRUE; + + /* Add the read operation (returns void) */ + rados_read_op_read(read_op, off, len, buf, &bytes_read, &prval); + + /* Execute read operation */ + if((ret = rados_read_op_operate(read_op, io, oid, LIBRADOS_OPERATION_NOFLAG)) < 0) + HGOTO_ERROR(H5E_SYM, H5E_CANTINIT, (-1), "can't perform read operation: %s", strerror(-ret)) + if(0 < prval) + HGOTO_ERROR(H5E_SYM, H5E_NOTFOUND, (-1), "RADOS read operation failed for object") + if(0 == bytes_read) + HGOTO_ERROR(H5E_SYM, H5E_NOTFOUND, (-1), "metadata not found for object") + + /* clean up */ + if(read_op_init) + rados_release_read_op(read_op); +} +#endif + +done: + FUNC_LEAVE_NOAPI(ret_value) +} /* end H5VL_rados_read() */ + + +/*------------------------------------------------------------------------- + * Function: H5VL_rados_write_full + * + * Purpose: Recreates rados_write_full(). We are trying to use all + * write_op calls and this lets us do that without duplicating + * all the RADOS boilerplate. + * + * Return: Success: 0 + * Failure: -1 + * + * Programmer: Dana Robinson + * February, 2019 + * + *------------------------------------------------------------------------- + */ +static int +H5VL_rados_write_full(rados_ioctx_t io, const char *oid, const char *buf, size_t len) +{ + int ret = 0; + int ret_value = 0; + + FUNC_ENTER_NOAPI_NOINIT + +#ifdef OLD_RADOS_CALLS + if((ret = rados_write_full(io, oid, buf, len)) < 0) + HGOTO_ERROR(H5E_SYM, H5E_CANTINIT, (-1), "can't write metadata to object: %s", strerror(-ret)) +#else +{ + rados_write_op_t write_op; + hbool_t write_op_init = FALSE; + + /* Create write op */ + if(NULL == (write_op = rados_create_write_op())) + HGOTO_ERROR(H5E_SYM, H5E_CANTINIT, (-1), "can't create write operation") + write_op_init = TRUE; + + /* Add the write full operation (returns void) */ + rados_write_op_write_full(write_op, buf, len); + + /* Execute write operation */ + if((ret = rados_write_op_operate(write_op, io, oid, NULL, LIBRADOS_OPERATION_NOFLAG)) < 0) + HGOTO_ERROR(H5E_SYM, H5E_CANTINIT, (-1), "can't perform write operation: %s", strerror(-ret)) + + /* clean up */ + if(write_op_init) + rados_release_write_op(write_op); +} +#endif + +done: + FUNC_LEAVE_NOAPI(ret_value) +} /* end H5VL_rados_write_full() */ + + +/*------------------------------------------------------------------------- + * Function: H5VL_rados_stat + * + * Purpose: Recreates rados_stat(). We are trying to use all read_op + * calls and this lets us do that without duplicating all + * the RADOS boilerplate. + * + * Return: Success: 0 + * Failure: -1 + * + * Programmer: Dana Robinson + * February, 2019 + * + *------------------------------------------------------------------------- + */ +static int +H5VL_rados_stat(rados_ioctx_t io, const char *oid, uint64_t *psize, time_t * pmtime) +{ + int ret = 0; + int ret_value = 0; + + FUNC_ENTER_NOAPI_NOINIT + +#ifdef OLD_RADOS_CALLS + /* Get the object size and time */ + if((ret = rados_stat(io, oid, psize, pmtime)) < 0) + HGOTO_ERROR(H5E_SYM, H5E_CANTDECODE, (-1), "can't read object size and time: %s", strerror(-ret)) +#else +{ + rados_read_op_t read_op; + hbool_t read_op_init = FALSE; + int prval; + + /* Create read op */ + if(NULL == (read_op = rados_create_read_op())) + HGOTO_ERROR(H5E_SYM, H5E_CANTINIT, (-1), "can't create read operation") + read_op_init = TRUE; + + /* Add the get stats operation (returns void) */ + rados_read_op_stat(read_op, psize, pmtime, &prval); + + /* Execute read operation */ + if((ret = rados_read_op_operate(read_op, io, oid, LIBRADOS_OPERATION_NOFLAG)) < 0) + HGOTO_ERROR(H5E_SYM, H5E_CANTINIT, (-1), "can't perform read operation: %s", strerror(-ret)) + if(0 < prval) + HGOTO_ERROR(H5E_SYM, H5E_NOTFOUND, (-1), "stats not found for object") + + /* clean up */ + if(read_op_init) + rados_release_read_op(read_op); +} +#endif + +done: + FUNC_LEAVE_NOAPI(ret_value) +} /* end H5VL_rados_stat() */ + + /* Create a RADOS string oid given the file name and binary oid */ static herr_t H5VL_rados_oid_create_string(const H5VL_rados_file_t *file, uint64_t bin_oid, @@ -964,7 +1142,7 @@ H5VL_rados_file_open(const char *name, unsigned flags, hid_t fapl_id, /* Read max oid directly to foi_buf */ /* Check for does not exist here and assume 0? -NAF */ - if((ret = rados_read(ioctx_g, file->glob_md_oid, foi_buf, 8, 0)) < 0) + if((ret = H5VL_rados_read(ioctx_g, file->glob_md_oid, foi_buf, 8, 0)) < 0) HGOTO_ERROR(H5E_DATASET, H5E_CANTDECODE, NULL, "can't read metadata from dataset: %s", strerror(-ret)) /* Decode max oid */ @@ -1272,7 +1450,7 @@ H5VL_rados_write_max_oid(H5VL_rados_file_t *file) UINT64ENCODE(p, file->max_oid) - if((ret = rados_write_full(ioctx_g, file->glob_md_oid, (const char *)wbuf, (size_t)8)) < 0) + if((ret = H5VL_rados_write_full(ioctx_g, file->glob_md_oid, (const char *)wbuf, (size_t)8)) < 0) HGOTO_ERROR(H5E_SYM, H5E_CANTINIT, FAIL, "can't write metadata to group: %s", strerror(-ret)) file->max_oid_dirty = FALSE; } /* end if */ @@ -1822,7 +2000,7 @@ H5VL_rados_group_create_helper(H5VL_rados_file_t *file, hid_t gcpl_id, HGOTO_ERROR(H5E_SYM, H5E_CANTENCODE, NULL, "can't serialize gcpl") /* Write internal metadata to group */ - if((ret = rados_write_full(ioctx_g, grp->obj.oid, gcpl_buf, gcpl_size)) < 0) + if((ret = H5VL_rados_write_full(ioctx_g, grp->obj.oid, gcpl_buf, gcpl_size)) < 0) HGOTO_ERROR(H5E_SYM, H5E_CANTINIT, NULL, "can't write metadata to group: %s", strerror(-ret)) /* Mark max OID as dirty */ @@ -1946,8 +2124,8 @@ H5VL_rados_group_open_helper(H5VL_rados_file_t *file, uint64_t oid, { H5VL_rados_group_t *grp = NULL; void *gcpl_buf = NULL; - uint64_t gcpl_len; - time_t pmtime; + uint64_t gcpl_len = 0; + time_t pmtime = 0; int ret; void *ret_value = NULL; @@ -1965,8 +2143,8 @@ H5VL_rados_group_open_helper(H5VL_rados_file_t *file, uint64_t oid, grp->gcpl_id = FAIL; grp->gapl_id = FAIL; - /* Read internal metadata size from group */ - if((ret = rados_stat(ioctx_g, grp->obj.oid, &gcpl_len, &pmtime)) < 0) + /* Get the object size and time */ + if((ret = H5VL_rados_stat(ioctx_g, grp->obj.oid, &gcpl_len, &pmtime)) < 0) HGOTO_ERROR(H5E_SYM, H5E_CANTDECODE, NULL, "can't read metadata size from group: %s", strerror(-ret)) /* Check for metadata not found */ @@ -1978,7 +2156,7 @@ H5VL_rados_group_open_helper(H5VL_rados_file_t *file, uint64_t oid, HGOTO_ERROR(H5E_RESOURCE, H5E_CANTALLOC, NULL, "can't allocate buffer for serialized gcpl") /* Read internal metadata from group */ - if((ret = rados_read(ioctx_g, grp->obj.oid, gcpl_buf, gcpl_len, 0)) < 0) + if((ret = H5VL_rados_read(ioctx_g, grp->obj.oid, gcpl_buf, gcpl_len, 0)) < 0) HGOTO_ERROR(H5E_SYM, H5E_CANTDECODE, NULL, "can't read metadata from group: %s", strerror(-ret)) /* Decode GCPL */ @@ -2674,7 +2852,7 @@ H5VL_rados_dataset_create(void *_item, HGOTO_ERROR(H5E_DATASET, H5E_CANTENCODE, NULL, "can't serialize dcpl") /* Write internal metadata to dataset */ - if((ret = rados_write_full(ioctx_g, dset->obj.oid, (const char *)md_buf, md_size)) < 0) + if((ret = H5VL_rados_write_full(ioctx_g, dset->obj.oid, (const char *)md_buf, md_size)) < 0) HGOTO_ERROR(H5E_DATASET, H5E_CANTINIT, NULL, "can't write metadata to dataset: %s", strerror(-ret)) /* Mark max OID as dirty */ @@ -2746,7 +2924,7 @@ H5VL_rados_dataset_open(void *_item, uint64_t type_len = 0; uint64_t space_len = 0; uint64_t dcpl_len = 0; - time_t pmtime; + time_t pmtime = 0; uint8_t dinfo_buf_static[H5VL_RADOS_DINFO_BUF_SIZE]; uint8_t *dinfo_buf_dyn = NULL; uint8_t *dinfo_buf = dinfo_buf_static; @@ -2804,8 +2982,8 @@ H5VL_rados_dataset_open(void *_item, HGOTO_ERROR(H5E_DATASET, H5E_CANTINIT, NULL, "can't encode string oid") } /* end else */ - /* Read internal metadata size from dataset */ - if((ret = rados_stat(ioctx_g, dset->obj.oid, &md_len, &pmtime)) < 0) + /* Get the object size and time */ + if((ret = H5VL_rados_stat(ioctx_g, dset->obj.oid, &md_len, &pmtime)) < 0) HGOTO_ERROR(H5E_DATASET, H5E_CANTDECODE, NULL, "can't read metadata size from group: %s", strerror(-ret)) /* Check for metadata not found */ @@ -2820,7 +2998,7 @@ H5VL_rados_dataset_open(void *_item, } /* end if */ /* Read internal metadata from dataset */ - if((ret = rados_read(ioctx_g, dset->obj.oid, (char *)(dinfo_buf + sizeof(uint64_t)), md_len, 0)) < 0) + if((ret = H5VL_rados_read(ioctx_g, dset->obj.oid, (char *)(dinfo_buf + sizeof(uint64_t)), md_len, 0)) < 0) HGOTO_ERROR(H5E_DATASET, H5E_CANTDECODE, NULL, "can't read metadata from dataset: %s", strerror(-ret)) /* Decode info lengths */ diff --git a/src/H5VLrados_public.h b/src/H5VLrados_public.h index 65ee9f4..e49339b 100644 --- a/src/H5VLrados_public.h +++ b/src/H5VLrados_public.h @@ -25,7 +25,11 @@ #define H5_HAVE_EFF 1 /* DSMINC */ /* External headers needed by this file */ +#ifdef HDF5_USE_MOBJECT +#include <librados-mobject-store.h> +#else #include <rados/librados.h> +#endif /* Public headers needed by this file */ #include "H5public.h" |