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authorElena Pourmal <epourmal@hdfgroup.org>2015-05-05 20:41:21 (GMT)
committerElena Pourmal <epourmal@hdfgroup.org>2015-05-05 20:41:21 (GMT)
commiteda6bf097aec520926d91e10319420edef1fc95b (patch)
treee79d3bb30c811e629cab7e7cd0c3292bf68012d5
parent8fe3dfbf9410ad5acabeaeb187bfb5f7b489042e (diff)
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[svn-r27024] Modified Percival example to read VDS data.
First, the example reads all VDS data, then the data that is in the first source dataset. Tested on jam.
-rw-r--r--examples/h5_vds-percival-unlim.c79
1 files changed, 69 insertions, 10 deletions
diff --git a/examples/h5_vds-percival-unlim.c b/examples/h5_vds-percival-unlim.c
index eaa83b4..b1acae1 100644
--- a/examples/h5_vds-percival-unlim.c
+++ b/examples/h5_vds-percival-unlim.c
@@ -64,13 +64,15 @@ main (void)
stride_out[3],
count_out[3],
block_out[3];
- int i, j;
+ int i, j, k;
H5D_layout_t layout; /* Storage layout */
size_t num_map; /* Number of mappings */
ssize_t len; /* Length of the string; also a return value */
char *filename;
char *dsetname;
int wdata[DIM0_1*DIM1*DIM2];
+ int rdata[80][10][10];
+ int a_rdata[20][10][10];
/*
* Create source files and datasets. This step is optional.
@@ -193,15 +195,6 @@ main (void)
status = H5Fclose (file);
}
- /* Let's get space of the VDS and its dimension; we should get 80x10x10 */
- vspace = H5Dget_space (vdset);
- H5Sget_simple_extent_dims (vspace, vdsdims_out, vdsdims_max_out);
- printf ("VDS dimensions second time \n");
- printf (" Current: ");
- for (i=0; i<RANK; i++)
- printf (" %d ", (int)vdsdims_out[i]);
- printf ("\n");
-
status = H5Dclose (vdset);
status = H5Fclose (vfile);
@@ -283,8 +276,74 @@ main (void)
free(dsetname);
}
/*
+ * Read data from VDS.
+ */
+ vspace = H5Dget_space (vdset);
+ H5Sget_simple_extent_dims (vspace, vdsdims_out, vdsdims_max_out);
+ printf ("VDS dimensions second time \n");
+ printf (" Current: ");
+ for (i=0; i<RANK; i++)
+ printf (" %d ", (int)vdsdims_out[i]);
+ printf ("\n");
+
+ /* Read all VDS data */
+
+ //EIP We should be able to do it by using H5S_ALL instead of making selection
+ // or using H5Sselect_all from vspace.
+ start[0] = 0;
+ start[1] = 0;
+ start[2] = 0;
+ count[0] = 1;
+ count[1] = 1;
+ count[2] = 1;
+ block[0] = vdsdims_out[0];
+ block[1] = vdsdims_out[1];
+ block[2] = vdsdims_out[2];
+
+ status = H5Sselect_hyperslab (vspace, H5S_SELECT_SET, start, NULL, count, block);
+ mem_space = H5Screate_simple(RANK, vdsdims_out, NULL);
+ status = H5Dread (vdset, H5T_NATIVE_INT, mem_space, vspace, H5P_DEFAULT,
+ rdata);
+ printf (" All data: \n");
+ for (i=0; i < (int)vdsdims_out[0]; i++) {
+ for (j=0; j < (int)vdsdims_out[1]; j++) {
+ printf ("(%d, %d, 0)", i, j);
+ for (k=0; k < (int)vdsdims_out[2]; k++)
+ printf (" %d ", rdata[i][j][k]);
+ printf ("\n");
+ }
+ }
+ /* Read VDS, but only data mapeed to dataset a.h5 */
+ start[0] = 0;
+ start[1] = 0;
+ start[2] = 0;
+ stride[0] = PLANE_STRIDE;
+ stride[1] = 1;
+ stride[2] = 1;
+ count[0] = 2*DIM0_1;
+ count[1] = 1;
+ count[2] = 1;
+ block[0] = 1;
+ block[1] = vdsdims_out[1];
+ block[2] = vdsdims_out[2];
+ dims[0] = 2*DIM0_1;
+ status = H5Sselect_hyperslab (vspace, H5S_SELECT_SET, start, stride, count, block);
+ mem_space = H5Screate_simple(RANK, dims, NULL);
+ status = H5Dread (vdset, H5T_NATIVE_INT, mem_space, vspace, H5P_DEFAULT,
+ a_rdata);
+ printf (" All data: \n");
+ for (i=0; i < 2*DIM0_1; i++) {
+ for (j=0; j < (int)vdsdims_out[1]; j++) {
+ printf ("(%d, %d, 0)", i, j);
+ for (k=0; k < (int)vdsdims_out[2]; k++)
+ printf (" %d ", a_rdata[i][j][k]);
+ printf ("\n");
+ }
+ }
+ /*
* Close and release resources.
*/
+ status = H5Sclose(mem_space);
status = H5Pclose (dcpl);
status = H5Dclose (vdset);
status = H5Fclose (vfile);