[svn-r10536]

Purpose:
Bug fix

Description:
Automake relies on the helper script depcomp to handle dependency tracking.
This script was from an older version of automake, and was generating
warnings on copper and sol.

Solution:
Updated bin/depcomp and bin/missing scripts.

Platforms tested:
copper, sleipnir, modi4

3 files changed, 235 insertions, 105 deletions

diff --git a/bin/depcomp b/bin/depcomp
index 807b991..ffcd540 100755
--- a/bin/depcomp
+++ b/bin/depcomp
@@ -1,7 +1,9 @@
 #! /bin/sh
-
 # depcomp - compile a program generating dependencies as side-effects
-# Copyright 1999, 2000 Free Software Foundation, Inc.
+
+scriptversion=2005-02-09.22
+
+# Copyright (C) 1999, 2000, 2003, 2004, 2005 Free Software Foundation, Inc.
 
 # This program is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
@@ -25,22 +27,45 @@
 
 # Originally written by Alexandre Oliva <oliva@dcc.unicamp.br>.
 
+case $1 in
+  '')
+     echo "$0: No command.  Try \`$0 --help' for more information." 1>&2
+     exit 1;
+     ;;
+  -h | --h*)
+    cat <<\EOF
+Usage: depcomp [--help] [--version] PROGRAM [ARGS]
+
+Run PROGRAMS ARGS to compile a file, generating dependencies
+as side-effects.
+
+Environment variables:
+  depmode     Dependency tracking mode.
+  source      Source file read by `PROGRAMS ARGS'.
+  object      Object file output by `PROGRAMS ARGS'.
+  DEPDIR      directory where to store dependencies.
+  depfile     Dependency file to output.
+  tmpdepfile  Temporary file to use when outputing dependencies.
+  libtool     Whether libtool is used (yes/no).
+
+Report bugs to <bug-automake@gnu.org>.
+EOF
+    exit $?
+    ;;
+  -v | --v*)
+    echo "depcomp $scriptversion"
+    exit $?
+    ;;
+esac
+
 if test -z "$depmode" || test -z "$source" || test -z "$object"; then
   echo "depcomp: Variables source, object and depmode must be set" 1>&2
   exit 1
 fi
-# `libtool' can also be set to `yes' or `no'.
-
-if test -z "$depfile"; then
-   base=`echo "$object" | sed -e 's,^.*/,,' -e 's,\.\([^.]*\)$,.P\1,'`
-   dir=`echo "$object" | sed 's,/.*$,/,'`
-   if test "$dir" = "$object"; then
-      dir=
-   fi
-   # FIXME: should be _deps on DOS.
-   depfile="$dir.deps/$base"
-fi
 
+# Dependencies for sub/bar.o or sub/bar.obj go into sub/.deps/bar.Po.
+depfile=${depfile-`echo "$object" |
+  sed 's|[^\\/]*$|'${DEPDIR-.deps}'/&|;s|\.\([^.]*\)$|.P\1|;s|Pobj$|Po|'`}
 tmpdepfile=${tmpdepfile-`echo "$depfile" | sed 's/\.\([^.]*\)$/.T\1/'`}
 
 rm -f "$tmpdepfile"
@@ -172,19 +197,25 @@ sgi)
 
 aix)
   # The C for AIX Compiler uses -M and outputs the dependencies
-  # in a .u file.  This file always lives in the current directory.
-  # Also, the AIX compiler puts `$object:' at the start of each line;
-  # $object doesn't have directory information.
-  stripped=`echo "$object" | sed -e 's,^.*/,,' -e 's/\(.*\)\..*$/\1/'`
+  # in a .u file.  In older versions, this file always lives in the
+  # current directory.  Also, the AIX compiler puts `$object:' at the
+  # start of each line; $object doesn't have directory information.
+  # Version 6 uses the directory in both cases.
+  stripped=`echo "$object" | sed 's/\(.*\)\..*$/\1/'`
   tmpdepfile="$stripped.u"
-  outname="$stripped.o"
   if test "$libtool" = yes; then
     "$@" -Wc,-M
   else
     "$@" -M
   fi
-
   stat=$?
+
+  if test -f "$tmpdepfile"; then :
+  else
+    stripped=`echo "$stripped" | sed 's,^.*/,,'`
+    tmpdepfile="$stripped.u"
+  fi
+
   if test $stat -eq 0; then :
   else
     rm -f "$tmpdepfile"
@@ -192,6 +223,7 @@ aix)
   fi
 
   if test -f "$tmpdepfile"; then
+    outname="$stripped.o"
     # Each line is of the form `foo.o: dependent.h'.
     # Do two passes, one to just change these to
     # `$object: dependent.h' and one to simply `dependent.h:'.
@@ -206,6 +238,44 @@ aix)
   rm -f "$tmpdepfile"
   ;;
 
+icc)
+  # Intel's C compiler understands `-MD -MF file'.  However on
+  #    icc -MD -MF foo.d -c -o sub/foo.o sub/foo.c
+  # ICC 7.0 will fill foo.d with something like
+  #    foo.o: sub/foo.c
+  #    foo.o: sub/foo.h
+  # which is wrong.  We want:
+  #    sub/foo.o: sub/foo.c
+  #    sub/foo.o: sub/foo.h
+  #    sub/foo.c:
+  #    sub/foo.h:
+  # ICC 7.1 will output
+  #    foo.o: sub/foo.c sub/foo.h
+  # and will wrap long lines using \ :
+  #    foo.o: sub/foo.c ... \
+  #     sub/foo.h ... \
+  #     ...
+
+  "$@" -MD -MF "$tmpdepfile"
+  stat=$?
+  if test $stat -eq 0; then :
+  else
+    rm -f "$tmpdepfile"
+    exit $stat
+  fi
+  rm -f "$depfile"
+  # Each line is of the form `foo.o: dependent.h',
+  # or `foo.o: dep1.h dep2.h \', or ` dep3.h dep4.h \'.
+  # Do two passes, one to just change these to
+  # `$object: dependent.h' and one to simply `dependent.h:'.
+  sed "s,^[^:]*:,$object :," < "$tmpdepfile" > "$depfile"
+  # Some versions of the HPUX 10.20 sed can't process this invocation
+  # correctly.  Breaking it into two sed invocations is a workaround.
+  sed 's,^[^:]*: \(.*\)$,\1,;s/^\\$//;/^$/d;/:$/d' < "$tmpdepfile" |
+    sed -e 's/$/ :/' >> "$depfile"
+  rm -f "$tmpdepfile"
+  ;;
+
 tru64)
    # The Tru64 compiler uses -MD to generate dependencies as a side
    # effect.  `cc -MD -o foo.o ...' puts the dependencies into `foo.o.d'.
@@ -217,31 +287,47 @@ tru64)
    base=`echo "$object" | sed -e 's|^.*/||' -e 's/\.o$//' -e 's/\.lo$//'`
 
    if test "$libtool" = yes; then
-      tmpdepfile1="$dir.libs/$base.lo.d"
-      tmpdepfile2="$dir.libs/$base.d"
+      # With Tru64 cc, shared objects can also be used to make a
+      # static library.  This mecanism is used in libtool 1.4 series to
+      # handle both shared and static libraries in a single compilation.
+      # With libtool 1.4, dependencies were output in $dir.libs/$base.lo.d.
+      #
+      # With libtool 1.5 this exception was removed, and libtool now
+      # generates 2 separate objects for the 2 libraries.  These two
+      # compilations output dependencies in in $dir.libs/$base.o.d and
+      # in $dir$base.o.d.  We have to check for both files, because
+      # one of the two compilations can be disabled.  We should prefer
+      # $dir$base.o.d over $dir.libs/$base.o.d because the latter is
+      # automatically cleaned when .libs/ is deleted, while ignoring
+      # the former would cause a distcleancheck panic.
+      tmpdepfile1=$dir.libs/$base.lo.d   # libtool 1.4
+      tmpdepfile2=$dir$base.o.d          # libtool 1.5
+      tmpdepfile3=$dir.libs/$base.o.d    # libtool 1.5
+      tmpdepfile4=$dir.libs/$base.d      # Compaq CCC V6.2-504
       "$@" -Wc,-MD
    else
-      tmpdepfile1="$dir$base.o.d"
-      tmpdepfile2="$dir$base.d"
+      tmpdepfile1=$dir$base.o.d
+      tmpdepfile2=$dir$base.d
+      tmpdepfile3=$dir$base.d
+      tmpdepfile4=$dir$base.d
       "$@" -MD
    fi
 
    stat=$?
    if test $stat -eq 0; then :
    else
-      rm -f "$tmpdepfile1" "$tmpdepfile2"
+      rm -f "$tmpdepfile1" "$tmpdepfile2" "$tmpdepfile3" "$tmpdepfile4"
       exit $stat
    fi
 
-   if test -f "$tmpdepfile1"; then
-      tmpdepfile="$tmpdepfile1"
-   else
-      tmpdepfile="$tmpdepfile2"
-   fi
+   for tmpdepfile in "$tmpdepfile1" "$tmpdepfile2" "$tmpdepfile3" "$tmpdepfile4"
+   do
+     test -f "$tmpdepfile" && break
+   done
    if test -f "$tmpdepfile"; then
       sed -e "s,^.*\.[a-z]*:,$object:," < "$tmpdepfile" > "$depfile"
-      # That's a space and a tab in the [].
-      sed -e 's,^.*\.[a-z]*:[ 	]*,,' -e 's,$,:,' < "$tmpdepfile" >> "$depfile"
+      # That's a tab and a space in the [].
+      sed -e 's,^.*\.[a-z]*:[	 ]*,,' -e 's,$,:,' < "$tmpdepfile" >> "$depfile"
    else
       echo "#dummy" > "$depfile"
    fi
@@ -254,7 +340,7 @@ tru64)
 
 dashmstdout)
   # Important note: in order to support this mode, a compiler *must*
-  # always write the proprocessed file to stdout, regardless of -o.
+  # always write the preprocessed file to stdout, regardless of -o.
   "$@" || exit $?
 
   # Remove the call to Libtool.
@@ -265,9 +351,7 @@ dashmstdout)
     shift
   fi
 
-  # Remove `-o $object'.  We will use -o /dev/null later,
-  # however we can't do the remplacement now because
-  # `-o $object' might simply not be used
+  # Remove `-o $object'.
   IFS=" "
   for arg
   do
@@ -287,7 +371,11 @@ dashmstdout)
   done
 
   test -z "$dashmflag" && dashmflag=-M
-  "$@" -o /dev/null $dashmflag | sed 's:^[^:]*\:[ 	]*:'"$object"'\: :' > "$tmpdepfile"
+  # Require at least two characters before searching for `:'
+  # in the target name.  This is to cope with DOS-style filenames:
+  # a dependency such as `c:/foo/bar' could be seen as target `c' otherwise.
+  "$@" $dashmflag |
+    sed 's:^[  ]*[^: ][^:][^:]*\:[    ]*:'"$object"'\: :' > "$tmpdepfile"
   rm -f "$depfile"
   cat < "$tmpdepfile" > "$depfile"
   tr ' ' '
@@ -306,6 +394,13 @@ dashXmstdout)
 
 makedepend)
   "$@" || exit $?
+  # Remove any Libtool call
+  if test "$libtool" = yes; then
+    while test $1 != '--mode=compile'; do
+      shift
+    done
+    shift
+  fi
   # X makedepend
   shift
   cleared=no
@@ -318,7 +413,9 @@ makedepend)
     case "$arg" in
     -D*|-I*)
       set fnord "$@" "$arg"; shift ;;
-    -*)
+    # Strip any option that makedepend may not understand.  Remove
+    # the object too, otherwise makedepend will parse it as a source file.
+    -*|$object)
       ;;
     *)
       set fnord "$@" "$arg"; shift ;;
@@ -339,7 +436,7 @@ makedepend)
 
 cpp)
   # Important note: in order to support this mode, a compiler *must*
-  # always write the proprocessed file to stdout.
+  # always write the preprocessed file to stdout.
   "$@" || exit $?
 
   # Remove the call to Libtool.
@@ -381,7 +478,7 @@ cpp)
 
 msvisualcpp)
   # Important note: in order to support this mode, a compiler *must*
-  # always write the proprocessed file to stdout, regardless of -o,
+  # always write the preprocessed file to stdout, regardless of -o,
   # because we must use -o when running libtool.
   "$@" || exit $?
   IFS=" "
@@ -421,3 +518,12 @@ none)
 esac
 
 exit 0
+
+# Local Variables:
+# mode: shell-script
+# sh-indentation: 2
+# eval: (add-hook 'write-file-hooks 'time-stamp)
+# time-stamp-start: "scriptversion="
+# time-stamp-format: "%:y-%02m-%02d.%02H"
+# time-stamp-end: "$"
+# End:
diff --git a/bin/missing b/bin/missing
index dd58370..09edd88 100755
--- a/bin/missing
+++ b/bin/missing
@@ -1,6 +1,10 @@
 #! /bin/sh
 # Common stub for a few missing GNU programs while installing.
-# Copyright 1996, 1997, 1999, 2000 Free Software Foundation, Inc.
+
+scriptversion=2005-02-08.22
+
+# Copyright (C) 1996, 1997, 1999, 2000, 2002, 2003, 2004, 2005
+#   Free Software Foundation, Inc.
 # Originally by Fran,cois Pinard <pinard@iro.umontreal.ca>, 1996.
 
 # This program is free software; you can redistribute it and/or modify
@@ -38,18 +42,24 @@ else
   configure_ac=configure.in
 fi
 
+msg="missing on your system"
+
 case "$1" in
 --run)
   # Try to run requested program, and just exit if it succeeds.
   run=
   shift
   "$@" && exit 0
+  # Exit code 63 means version mismatch.  This often happens
+  # when the user try to use an ancient version of a tool on
+  # a file that requires a minimum version.  In this case we
+  # we should proceed has if the program had been absent, or
+  # if --run hadn't been passed.
+  if test $? = 63; then
+    run=:
+    msg="probably too old"
+  fi
   ;;
-esac
-
-# If it does not exist, or fails to run (possibly an outdated version),
-# try to emulate it.
-case "$1" in
 
   -h|--h|--he|--hel|--help)
     echo "\
@@ -74,11 +84,15 @@ Supported PROGRAM values:
   lex          create \`lex.yy.c', if possible, from existing .c
   makeinfo     touch the output file
   tar          try tar, gnutar, gtar, then tar without non-portable flags
-  yacc         create \`y.tab.[ch]', if possible, from existing .[ch]"
+  yacc         create \`y.tab.[ch]', if possible, from existing .[ch]
+
+Send bug reports to <bug-automake@gnu.org>."
+    exit $?
     ;;
 
   -v|--v|--ve|--ver|--vers|--versi|--versio|--version)
-    echo "missing 0.4 - GNU automake"
+    echo "missing $scriptversion (GNU Automake)"
+    exit $?
     ;;
 
   -*)
@@ -87,14 +101,44 @@ Supported PROGRAM values:
     exit 1
     ;;
 
-  aclocal*)
+esac
+
+# Now exit if we have it, but it failed.  Also exit now if we
+# don't have it and --version was passed (most likely to detect
+# the program).
+case "$1" in
+  lex|yacc)
+    # Not GNU programs, they don't have --version.
+    ;;
+
+  tar)
+    if test -n "$run"; then
+       echo 1>&2 "ERROR: \`tar' requires --run"
+       exit 1
+    elif test "x$2" = "x--version" || test "x$2" = "x--help"; then
+       exit 1
+    fi
+    ;;
+
+  *)
     if test -z "$run" && ($1 --version) > /dev/null 2>&1; then
        # We have it, but it failed.
        exit 1
+    elif test "x$2" = "x--version" || test "x$2" = "x--help"; then
+       # Could not run --version or --help.  This is probably someone
+       # running `$TOOL --version' or `$TOOL --help' to check whether
+       # $TOOL exists and not knowing $TOOL uses missing.
+       exit 1
     fi
+    ;;
+esac
 
+# If it does not exist, or fails to run (possibly an outdated version),
+# try to emulate it.
+case "$1" in
+  aclocal*)
     echo 1>&2 "\
-WARNING: \`$1' is missing on your system.  You should only need it if
+WARNING: \`$1' is $msg.  You should only need it if
          you modified \`acinclude.m4' or \`${configure_ac}'.  You might want
          to install the \`Automake' and \`Perl' packages.  Grab them from
          any GNU archive site."
@@ -102,13 +146,8 @@ WARNING: \`$1' is missing on your system.  You should only need it if
     ;;
 
   autoconf)
-    if test -z "$run" && ($1 --version) > /dev/null 2>&1; then
-       # We have it, but it failed.
-       exit 1
-    fi
-
     echo 1>&2 "\
-WARNING: \`$1' is missing on your system.  You should only need it if
+WARNING: \`$1' is $msg.  You should only need it if
          you modified \`${configure_ac}'.  You might want to install the
          \`Autoconf' and \`GNU m4' packages.  Grab them from any GNU
          archive site."
@@ -116,13 +155,8 @@ WARNING: \`$1' is missing on your system.  You should only need it if
     ;;
 
   autoheader)
-    if test -z "$run" && ($1 --version) > /dev/null 2>&1; then
-       # We have it, but it failed.
-       exit 1
-    fi
-
     echo 1>&2 "\
-WARNING: \`$1' is missing on your system.  You should only need it if
+WARNING: \`$1' is $msg.  You should only need it if
          you modified \`acconfig.h' or \`${configure_ac}'.  You might want
          to install the \`Autoconf' and \`GNU m4' packages.  Grab them
          from any GNU archive site."
@@ -140,13 +174,8 @@ WARNING: \`$1' is missing on your system.  You should only need it if
     ;;
 
   automake*)
-    if test -z "$run" && ($1 --version) > /dev/null 2>&1; then
-       # We have it, but it failed.
-       exit 1
-    fi
-
     echo 1>&2 "\
-WARNING: \`$1' is missing on your system.  You should only need it if
+WARNING: \`$1' is $msg.  You should only need it if
          you modified \`Makefile.am', \`acinclude.m4' or \`${configure_ac}'.
          You might want to install the \`Automake' and \`Perl' packages.
          Grab them from any GNU archive site."
@@ -156,16 +185,11 @@ WARNING: \`$1' is missing on your system.  You should only need it if
     ;;
 
   autom4te)
-    if test -z "$run" && ($1 --version) > /dev/null 2>&1; then
-       # We have it, but it failed.
-       exit 1
-    fi
-
     echo 1>&2 "\
-WARNING: \`$1' is needed, and you do not seem to have it handy on your
-         system.  You might have modified some files without having the
+WARNING: \`$1' is needed, but is $msg.
+         You might have modified some files without having the
          proper tools for further handling them.
-         You can get \`$1Help2man' as part of \`Autoconf' from any GNU
+         You can get \`$1' as part of \`Autoconf' from any GNU
          archive site."
 
     file=`echo "$*" | sed -n 's/.*--output[ =]*\([^ ]*\).*/\1/p'`
@@ -185,7 +209,7 @@ WARNING: \`$1' is needed, and you do not seem to have it handy on your
 
   bison|yacc)
     echo 1>&2 "\
-WARNING: \`$1' is missing on your system.  You should only need it if
+WARNING: \`$1' $msg.  You should only need it if
          you modified a \`.y' file.  You may need the \`Bison' package
          in order for those modifications to take effect.  You can get
          \`Bison' from any GNU archive site."
@@ -215,7 +239,7 @@ WARNING: \`$1' is missing on your system.  You should only need it if
 
   lex|flex)
     echo 1>&2 "\
-WARNING: \`$1' is missing on your system.  You should only need it if
+WARNING: \`$1' is $msg.  You should only need it if
          you modified a \`.l' file.  You may need the \`Flex' package
          in order for those modifications to take effect.  You can get
          \`Flex' from any GNU archive site."
@@ -237,13 +261,8 @@ WARNING: \`$1' is missing on your system.  You should only need it if
     ;;
 
   help2man)
-    if test -z "$run" && ($1 --version) > /dev/null 2>&1; then
-       # We have it, but it failed.
-       exit 1
-    fi
-
     echo 1>&2 "\
-WARNING: \`$1' is missing on your system.  You should only need it if
+WARNING: \`$1' is $msg.  You should only need it if
 	 you modified a dependency of a manual page.  You may need the
 	 \`Help2man' package in order for those modifications to take
 	 effect.  You can get \`Help2man' from any GNU archive site."
@@ -262,54 +281,49 @@ WARNING: \`$1' is missing on your system.  You should only need it if
     ;;
 
   makeinfo)
-    if test -z "$run" && (makeinfo --version) > /dev/null 2>&1; then
-       # We have makeinfo, but it failed.
-       exit 1
-    fi
-
     echo 1>&2 "\
-WARNING: \`$1' is missing on your system.  You should only need it if
+WARNING: \`$1' is $msg.  You should only need it if
          you modified a \`.texi' or \`.texinfo' file, or any other file
          indirectly affecting the aspect of the manual.  The spurious
          call might also be the consequence of using a buggy \`make' (AIX,
          DU, IRIX).  You might want to install the \`Texinfo' package or
          the \`GNU make' package.  Grab either from any GNU archive site."
+    # The file to touch is that specified with -o ...
     file=`echo "$*" | sed -n 's/.*-o \([^ ]*\).*/\1/p'`
     if test -z "$file"; then
-      file=`echo "$*" | sed 's/.* \([^ ]*\) *$/\1/'`
-      file=`sed -n '/^@setfilename/ { s/.* \([^ ]*\) *$/\1/; p; q; }' $file`
+      # ... or it is the one specified with @setfilename ...
+      infile=`echo "$*" | sed 's/.* \([^ ]*\) *$/\1/'`
+      file=`sed -n '/^@setfilename/ { s/.* \([^ ]*\) *$/\1/; p; q; }' $infile`
+      # ... or it is derived from the source name (dir/f.texi becomes f.info)
+      test -z "$file" && file=`echo "$infile" | sed 's,.*/,,;s,.[^.]*$,,'`.info
     fi
     touch $file
     ;;
 
   tar)
     shift
-    if test -n "$run"; then
-      echo 1>&2 "ERROR: \`tar' requires --run"
-      exit 1
-    fi
 
     # We have already tried tar in the generic part.
     # Look for gnutar/gtar before invocation to avoid ugly error
     # messages.
     if (gnutar --version > /dev/null 2>&1); then
-       gnutar ${1+"$@"} && exit 0
+       gnutar "$@" && exit 0
     fi
     if (gtar --version > /dev/null 2>&1); then
-       gtar ${1+"$@"} && exit 0
+       gtar "$@" && exit 0
     fi
     firstarg="$1"
     if shift; then
 	case "$firstarg" in
 	*o*)
 	    firstarg=`echo "$firstarg" | sed s/o//`
-	    tar "$firstarg" ${1+"$@"} && exit 0
+	    tar "$firstarg" "$@" && exit 0
 	    ;;
 	esac
 	case "$firstarg" in
 	*h*)
 	    firstarg=`echo "$firstarg" | sed s/h//`
-	    tar "$firstarg" ${1+"$@"} && exit 0
+	    tar "$firstarg" "$@" && exit 0
 	    ;;
 	esac
     fi
@@ -323,10 +337,10 @@ WARNING: I can't seem to be able to run \`tar' with the given arguments.
 
   *)
     echo 1>&2 "\
-WARNING: \`$1' is needed, and you do not seem to have it handy on your
-         system.  You might have modified some files without having the
+WARNING: \`$1' is needed, and is $msg.
+         You might have modified some files without having the
          proper tools for further handling them.  Check the \`README' file,
-         it often tells you about the needed prerequirements for installing
+         it often tells you about the needed prerequisites for installing
          this package.  You may also peek at any GNU archive site, in case
          some other package would contain this missing \`$1' program."
     exit 1
@@ -334,3 +348,10 @@ WARNING: \`$1' is needed, and you do not seem to have it handy on your
 esac
 
 exit 0
+
+# Local variables:
+# eval: (add-hook 'write-file-hooks 'time-stamp)
+# time-stamp-start: "scriptversion="
+# time-stamp-format: "%:y-%02m-%02d.%02H"
+# time-stamp-end: "$"
+# End:
diff --git a/bin/reconfigure b/bin/reconfigure
index 80b8268..56b0779 100755
--- a/bin/reconfigure
+++ b/bin/reconfigure
@@ -4,9 +4,12 @@
 # has the paths of autoconf and automake hardcoded to work on HDF
 # machines.  Thus is enforces that HDF5 always uses the
 # same versions of autotools.
-# Uses automake version 1.6.3
+# Uses automake version 1.9.5
 # Uses autoconf version 2.59
 # Includes macros from libtool version 1.4.2
+#
+# When upgrading automake's version, don't forget to also update its
+# helper utilities, especially depcomp.
 
 # The autotools live in AFS, so as long as their paths don't change
 # and this machine has the right version of m4, this script should
@@ -24,8 +27,8 @@ PATH=/afs/ncsa/projects/hdf/packages/autoconf_2.59/Linux_2.4/bin:$PATH
   echo /afs/ncsa/projects/hdf/packages/autoconf_2.59/Linux_2.4/bin/autoheader
   /afs/ncsa/projects/hdf/packages/autoconf_2.59/Linux_2.4/bin/autoheader
 
-  echo /afs/ncsa/projects/hdf/packages/automake_1.9.5/Linux_2.4/bin/automake-1.9 --foreign
-  /afs/ncsa/projects/hdf/packages/automake_1.9.5/Linux_2.4/bin/automake-1.9 --foreign
+  echo /afs/ncsa/projects/hdf/packages/automake_1.9.5/Linux_2.4/bin/automake-1.9 --foreign --add-missing
+  /afs/ncsa/projects/hdf/packages/automake_1.9.5/Linux_2.4/bin/automake-1.9 --foreign --add-missing
 
   echo /afs/ncsa/projects/hdf/packages/autoconf_2.59/Linux_2.4/bin/autoconf
   /afs/ncsa/projects/hdf/packages/autoconf_2.59/Linux_2.4/bin/autoconf