diff options
author | Mohamad Chaarawi <chaarawi@hdfgroup.org> | 2013-10-16 18:28:24 (GMT) |
---|---|---|
committer | Mohamad Chaarawi <chaarawi@hdfgroup.org> | 2013-10-16 18:28:24 (GMT) |
commit | 75a5c72ace679984de255dcbfad4eaea2ceb5e43 (patch) | |
tree | ed579265369516084642533c5261476515f9d818 /c++/test | |
parent | b780d0d79d9cc198b03952179d283f3aa814f45e (diff) | |
parent | ae573ecf56160fb3383b4ca7b8811a2085d2762f (diff) | |
download | hdf5-75a5c72ace679984de255dcbfad4eaea2ceb5e43.zip hdf5-75a5c72ace679984de255dcbfad4eaea2ceb5e43.tar.gz hdf5-75a5c72ace679984de255dcbfad4eaea2ceb5e43.tar.bz2 |
[svn-r24303] update from VOL branch that has been updated with trunk.
resolve conflicts, etc..
Diffstat (limited to 'c++/test')
-rw-r--r-- | c++/test/Makefile.in | 1 | ||||
-rw-r--r-- | c++/test/dsets.cpp | 11 | ||||
-rw-r--r-- | c++/test/h5cpputil.cpp | 24 | ||||
-rw-r--r-- | c++/test/h5cpputil.h | 2 | ||||
-rw-r--r-- | c++/test/tfile.cpp | 55 | ||||
-rw-r--r-- | c++/test/th5s.cpp | 5 | ||||
-rw-r--r-- | c++/test/trefer.cpp | 676 |
7 files changed, 635 insertions, 139 deletions
diff --git a/c++/test/Makefile.in b/c++/test/Makefile.in index 0084bfe..17264b9 100644 --- a/c++/test/Makefile.in +++ b/c++/test/Makefile.in @@ -259,6 +259,7 @@ LIPO = @LIPO@ LL_PATH = @LL_PATH@ LN_S = @LN_S@ LTLIBOBJS = @LTLIBOBJS@ +LT_ADD_LIBHDF5_DEPENDENCY = @LT_ADD_LIBHDF5_DEPENDENCY@ LT_STATIC_EXEC = @LT_STATIC_EXEC@ MAINT = @MAINT@ MAKEINFO = @MAKEINFO@ diff --git a/c++/test/dsets.cpp b/c++/test/dsets.cpp index 643762b..811d8c7 100644 --- a/c++/test/dsets.cpp +++ b/c++/test/dsets.cpp @@ -283,13 +283,13 @@ test_simple_io( H5File& file) *------------------------------------------------------------------------- */ static herr_t -test_datasize() +test_datasize(FileAccPropList &fapl) { SUBTEST("DataSet::getInMemDataSize()"); try { // Open FILE1. - H5File file(FILE1, H5F_ACC_RDWR, FileCreatPropList::DEFAULT, FileAccPropList::DEFAULT); + H5File file(FILE1, H5F_ACC_RDWR, FileCreatPropList::DEFAULT, fapl); // Open dataset DSET_SIMPLE_IO_NAME. DataSet dset = file.openDataSet (DSET_SIMPLE_IO_NAME); @@ -1058,7 +1058,7 @@ void test_dset() // Cause the library to emit initial messages Group grp = file.createGroup( "emit diagnostics", 0); - grp.setComment( ".", "Causes diagnostic messages to be emitted"); + grp.setComment("Causes diagnostic messages to be emitted"); nerrors += test_create(file)<0 ?1:0; nerrors += test_simple_io(file)<0 ?1:0; @@ -1067,9 +1067,12 @@ void test_dset() nerrors += test_multiopen (file)<0 ?1:0; nerrors += test_types(file)<0 ?1:0; + // Close group "emit diagnostics". + grp.close(); + // Close the file before testing data size. file.close(); - nerrors += test_datasize() <0 ? 1:0; + nerrors += test_datasize(fapl) <0 ? 1:0; } catch (Exception E) { diff --git a/c++/test/h5cpputil.cpp b/c++/test/h5cpputil.cpp index c6a7a2a..cd85b6e 100644 --- a/c++/test/h5cpputil.cpp +++ b/c++/test/h5cpputil.cpp @@ -107,6 +107,30 @@ void issue_fail_msg(const char* where, int line, const char* file_name, } /*------------------------------------------------------------------------- + * Function: issue_fail_msg + * + * Purpose: Displays that a function has failed with its location. + * + * Return: None + * + * Programmer: Binh-Minh Ribler (copied and modified macro CHECK from C) + * Monday, December 20, 2004 + * + *------------------------------------------------------------------------- + */ +void issue_fail_msg(const char* where, int line, const char* file_name, + const char* func_name, const char* message) +{ + //if (GetTestVerbosity()>=VERBO_HI) + { + cerr << endl; + cerr << ">>> FAILED in " << where << ": " << func_name << endl << + " at line " << line << " in " << file_name << endl << + " C library detail: " << message << endl << endl; + } +} + +/*------------------------------------------------------------------------- * Function: check_values * * Purpose: Checks a read value against the written value. If they are diff --git a/c++/test/h5cpputil.h b/c++/test/h5cpputil.h index 02f3d0d..e6aba79 100644 --- a/c++/test/h5cpputil.h +++ b/c++/test/h5cpputil.h @@ -42,6 +42,8 @@ int check_values (hsize_t i, hsize_t j, int apoint, int acheck); int test_report (int, const H5std_string&); void issue_fail_msg(const char* where, int line, const char* file_name, const char* message=""); +void issue_fail_msg(const char* where, int line, const char* file_name, + const char* func_name, const char* message); class InvalidActionException : public Exception { public: diff --git a/c++/test/tfile.cpp b/c++/test/tfile.cpp index 65b8e57..965065a 100644 --- a/c++/test/tfile.cpp +++ b/c++/test/tfile.cpp @@ -108,16 +108,10 @@ static void test_file_create() // Create file FILE1 file1 = new H5File (FILE1, H5F_ACC_EXCL); - // try to create the same file with H5F_ACC_TRUNC. This should fail - // because file1 is the same file and is currently open. - -/* These three are failing with new/PGI compiler, HDFFV-8067 - The line "H5File file2 (FILE1, H5F_ACC_TRUNC); // should throw E" - Results in this message: - "terminate called without an active exception - Command terminated by signal 6" - Commenting it out until it's fixed LK 20120626. -*/ + // Try to create the same file with H5F_ACC_TRUNC. This should fail + // because file1 is the same file and is currently open. Skip it on + // OpenVMS because it creates another version of the file. +#ifndef H5_HAVE_FILE_VERSIONS try { H5File file2 (FILE1, H5F_ACC_TRUNC); // should throw E @@ -126,6 +120,7 @@ static void test_file_create() } catch( FileIException E ) // catch truncating existing file {} // do nothing, FAIL expected +#endif // H5_HAVE_FILE_VERSIONS // Close file1 delete file1; @@ -141,11 +136,14 @@ static void test_file_create() } catch( FileIException E ) // catching creating existing file {} // do nothing, FAIL expected + // Test create with H5F_ACC_TRUNC. This will truncate the existing file. file1 = new H5File (FILE1, H5F_ACC_TRUNC); - // Try to truncate first file again. This should fail because file1 - // is the same file and is currently open. + // Try to create first file again. This should fail because file1 + // is the same file and is currently open. Skip it on OpenVMS because + // it creates another version of the file. +#ifndef H5_HAVE_FILE_VERSIONS try { H5File file2 (FILE1, H5F_ACC_TRUNC); // should throw E @@ -156,7 +154,7 @@ static void test_file_create() {} // do nothing, FAIL expected // Try with H5F_ACC_EXCL. This should fail too because the file already - // exists. + // exists. Skip it on OpenVMS because it creates another version of the file. try { H5File file3 (FILE1, H5F_ACC_EXCL); // should throw E @@ -165,6 +163,7 @@ static void test_file_create() } catch( FileIException E ) // catching H5F_ACC_EXCL on existing file {} // do nothing, FAIL expected +#endif /*H5_HAVE_FILE_VERSIONS*/ // Get the file-creation template FileCreatPropList tmpl1 = file1->getCreatePlist(); @@ -387,7 +386,7 @@ static void test_file_size() // Check if it's reasonable. It's 0 now. if (free_space < 0 || free_space > 4*KB) - issue_fail_msg("test_file_size()", __LINE__, __FILE__, "getFreeSpace returned unreasonable value"); + issue_fail_msg("test_file_size()", __LINE__, __FILE__, "getFreeSpace returned unreasonable value"); PASSED(); } // end of try block @@ -433,54 +432,54 @@ typedef struct s1_t { static void test_file_name() { - // Output message about test being performed + // Output message about test being performed. SUBTEST("File Name"); H5std_string file_name; try { - // Create a file using default properties + // Create a file using default properties. H5File file4(FILE4, H5F_ACC_TRUNC); - // Get file name from the file instance + // Get file name from the file instance. file_name = file4.getFileName(); verify_val(file_name, FILE4, "H5File::getFileName", __LINE__, __FILE__); - // Create a group in the root group + // Create a group in the root group. Group group(file4.createGroup(GROUPNAME, 0)); - // Get and verify file name via a group + // Get and verify file name via a group. file_name = group.getFileName(); verify_val(file_name, FILE4, "Group::getFileName", __LINE__, __FILE__); - // Create the data space + // Create the data space. hsize_t dims[RANK] = {NX, NY}; DataSpace space(RANK, dims); - // Create a new dataset + // Create a new dataset. DataSet dataset(file4.createDataSet (DSETNAME, PredType::NATIVE_INT, space)); - // Get and verify file name via a dataset + // Get and verify file name via a dataset. file_name = dataset.getFileName(); verify_val(file_name, FILE4, "DataSet::getFileName", __LINE__, __FILE__); - // Create an attribute for the dataset + // Create an attribute for the dataset. Attribute attr(dataset.createAttribute(DATTRNAME, PredType::NATIVE_INT, space)); - // Get and verify file name + // Get and verify file name via an attribute. file_name = attr.getFileName(); verify_val(file_name, FILE4, "Attribute::getFileName", __LINE__, __FILE__); - // Create a compound datatype + // Create a compound datatype. CompType comp_type (sizeof(s1_t)); - // Insert fields + // Insert fields. comp_type.insertMember("a", HOFFSET(s1_t, a), PredType::NATIVE_INT); comp_type.insertMember("b", HOFFSET(s1_t, b), PredType::NATIVE_FLOAT); - // Save it on file + // Save it on file. comp_type.commit(file4, DTYPENAME); - // Get and verify file name + // Get and verify file name via a committed datatype. comp_type.getFileName(); verify_val(file_name, FILE4, "CompType::getFileName", __LINE__, __FILE__); PASSED(); diff --git a/c++/test/th5s.cpp b/c++/test/th5s.cpp index 7947a9b..cfdeb1f 100644 --- a/c++/test/th5s.cpp +++ b/c++/test/th5s.cpp @@ -188,7 +188,10 @@ static void test_h5s_basic() * If this test fails and the H5S_MAX_RANK variable has changed, follow * the instructions in space_overflow.c for regenating the th5s.h5 file. */ - const char *testfile = H5_get_srcdir_filename(TESTFILE.c_str()); + char *tmp_str = new char[TESTFILE.length()+1]; + strcpy(tmp_str, TESTFILE.c_str()); + const char *testfile = H5_get_srcdir_filename(tmp_str); + delete []tmp_str; // Create file H5File fid1(testfile, H5F_ACC_RDONLY); diff --git a/c++/test/trefer.cpp b/c++/test/trefer.cpp index ce18e58..36c2ee4 100644 --- a/c++/test/trefer.cpp +++ b/c++/test/trefer.cpp @@ -27,13 +27,6 @@ #endif #include <string> -#ifndef H5_NO_NAMESPACE -#ifndef H5_NO_STD - using std::cerr; - using std::endl; -#endif // H5_NO_STD -#endif - #include "H5Cpp.h" // C++ API header file #ifndef H5_NO_NAMESPACE @@ -44,27 +37,25 @@ const H5std_string FILE1("trefer1.h5"); const H5std_string FILE2("trefer2.h5"); -const H5std_string FILE3("trefer3.h5"); -const H5std_string DSET_DEFAULT_NAME("default"); // Dataset 1 const H5std_string DSET1_NAME("Dataset1"); -const int DSET1_LEN = 8; +const H5std_string DSET2_NAME("Dataset2"); const H5std_string MEMBER1( "a_name" ); const H5std_string MEMBER2( "b_name" ); const H5std_string MEMBER3( "c_name" ); // 1-D dataset with fixed dimensions -const H5std_string SPACE1_NAME("Space1"); const int SPACE1_RANK = 1; const int SPACE1_DIM1 = 4; -// 2-D dataset with fixed dimensions -const H5std_string SPACE2_NAME("Space2"); +/* Larger 1-D dataset with fixed dimensions */ +const int SPACE3_RANK = 1; +const int SPACE3_DIM1 = 100; -// Larger 1-D dataset with fixed dimensions -const H5std_string SPACE3_NAME("Space3"); +/* Element selection information */ +const int POINT1_NPOINTS = 10; // Compound datatype typedef struct s1_t { @@ -75,8 +66,123 @@ typedef struct s1_t { /**************************************************************** ** -** test_reference_obj(): Test basic object reference functionality. -** Tests references to various kinds of objects +** test_reference_params(): Test basic H5R (reference) parameters +** for correct processing +** +****************************************************************/ +static void +test_reference_params(void) +{ + const char *write_comment = "Foo!"; /* Comments for group */ + + // Output message about test being performed + SUBTEST("Object Reference Parameters"); + + H5File* file1 = NULL; + try { + hobj_ref_t *wbuf, // buffer to write to disk + *rbuf, // buffer read from disk + *tbuf; // temp. buffer read from disk + + // Allocate write & read buffers + int temp_size = MAX(sizeof(unsigned),sizeof(hobj_ref_t)); + wbuf=(hobj_ref_t*)HDmalloc(temp_size*SPACE1_DIM1); + rbuf=(hobj_ref_t*)HDmalloc(temp_size*SPACE1_DIM1); + tbuf=(hobj_ref_t*)HDmalloc(temp_size*SPACE1_DIM1); + + // Create file FILE1 + file1 = new H5File (FILE1, H5F_ACC_TRUNC); + + // Create dataspace for datasets + hsize_t dims1[] = {SPACE1_DIM1}; + DataSpace sid1(SPACE1_RANK, dims1); + + // Create a group + Group group = file1->createGroup("Group1"); + + // Set group's comment + group.setComment(".", write_comment); + + // Create a dataset (inside /Group1) + DataSet dataset = group.createDataSet(DSET1_NAME, PredType::NATIVE_UINT, sid1); + + unsigned *tu32; // Temporary pointer to uint32 data + int i; + for (tu32=(unsigned *)wbuf, i=0; i<SPACE1_DIM1; i++) + *tu32++=i*3; // from C test + + // Write selection to disk + dataset.write(wbuf, PredType::NATIVE_UINT); + + // Close Dataset + dataset.close(); + + // Create another dataset (inside /Group1) + dataset = group.createDataSet("Dataset2", PredType::NATIVE_UCHAR, sid1); + + // Close Dataset + dataset.close(); + + // Create a datatype to refer to + CompType dtype1(sizeof(s1_t)); + + // Insert fields + dtype1.insertMember(MEMBER1, HOFFSET(s1_t, a), PredType::NATIVE_INT); + dtype1.insertMember(MEMBER2, HOFFSET(s1_t, b), PredType::NATIVE_INT); + dtype1.insertMember(MEMBER3, HOFFSET(s1_t, c), PredType::NATIVE_FLOAT); + + // Save datatype for later + dtype1.commit(group, "Datatype1"); + + // Close datatype and group + dtype1.close(); + group.close(); + + // Create a dataset + dataset = file1->createDataSet("Dataset3", PredType::STD_REF_OBJ, sid1); + + /* Test parameters to H5Location::reference */ + try { + file1->reference(NULL, "/Group1/Dataset1"); + } catch (ReferenceException E) {} // We expect this to fail + try { + file1->reference(&wbuf[0], NULL); + } catch (ReferenceException E) {} // We expect this to fail + try { + file1->reference(&wbuf[0], ""); + } catch (ReferenceException E) {} // We expect this to fail + try { + file1->reference(&wbuf[0], "/Group1/Dataset1", H5R_MAXTYPE); + } catch (ReferenceException E) {} // We expect this to fail + try { + file1->reference(&wbuf[0], "/Group1/Dataset1", H5R_DATASET_REGION); + } catch (ReferenceException E) {} // We expect this to fail + + // Close resources + dataset.close(); + file1->close(); + // Let sid1 go out of scope + + // Free memory buffers + HDfree(wbuf); + HDfree(rbuf); + HDfree(tbuf); + + PASSED(); + } // end try + catch (Exception E) { + issue_fail_msg("test_reference_param()",__LINE__,__FILE__, + E.getCFuncName(), E.getCDetailMsg()); + } + + if(file1) + delete file1; +} /* test_reference_param() */ + +/**************************************************************** +** +** test_reference_obj(): Test basic object reference functions +** to various kinds of objects ** ****************************************************************/ static void test_reference_obj(void) @@ -106,8 +212,11 @@ static void test_reference_obj(void) hsize_t dims1[] = {SPACE1_DIM1}; DataSpace sid1(SPACE1_RANK, dims1); + // Create dataset access property list + PropList dapl(H5P_DATASET_ACCESS); + // Create a group - Group group = file1->createGroup("Group1", (size_t)-1); + Group group = file1->createGroup("Group1"); // Set group's comment group.setComment(".", write_comment); @@ -116,7 +225,7 @@ static void test_reference_obj(void) DataSet dataset = group.createDataSet(DSET1_NAME, PredType::NATIVE_UINT, sid1); unsigned *tu32; // Temporary pointer to uint32 data - for (tu32=(unsigned *)wbuf, i=0; i<SPACE1_DIM1; i++) + for (tu32 = (unsigned *)wbuf, i = 0; i < SPACE1_DIM1; i++) *tu32++=i*3; // from C test // Write selection to disk @@ -152,22 +261,22 @@ static void test_reference_obj(void) // Create reference to dataset and test getRefObjType file1->reference(&wbuf[0], "/Group1/Dataset1"); H5O_type_t refobj_type = dataset.getRefObjType(&wbuf[0], H5R_OBJECT); - verify_val(refobj_type, H5O_TYPE_DATASET, "DataSet::getRefObjType", __LINE__, __FILE__); + verify_val(refobj_type, H5O_TYPE_DATASET, "DataSet::getRefObjType",__LINE__,__FILE__); // Create reference to dataset and test getRefObjType file1->reference(&wbuf[1], "/Group1/Dataset2"); refobj_type = dataset.getRefObjType(&wbuf[1], H5R_OBJECT); - verify_val(refobj_type, H5O_TYPE_DATASET, "DataSet::getRefObjType", __LINE__, __FILE__); + verify_val(refobj_type, H5O_TYPE_DATASET, "DataSet::getRefObjType",__LINE__,__FILE__); // Create reference to group file1->reference(&wbuf[2], "/Group1"); refobj_type = dataset.getRefObjType(&wbuf[2], H5R_OBJECT); - verify_val(refobj_type, H5O_TYPE_GROUP, "DataSet::getRefObjType", __LINE__, __FILE__); + verify_val(refobj_type, H5O_TYPE_GROUP, "DataSet::getRefObjType",__LINE__,__FILE__); // Create reference to named datatype file1->reference(&wbuf[3], "/Group1/Datatype1"); refobj_type = dataset.getRefObjType(&wbuf[3], H5R_OBJECT); - verify_val(refobj_type, H5O_TYPE_NAMED_DATATYPE, "DataSet::getRefObjType", __LINE__, __FILE__); + verify_val(refobj_type, H5O_TYPE_NAMED_DATATYPE, "DataSet::getRefObjType",__LINE__,__FILE__); // Write selection to disk dataset.write(wbuf, PredType::STD_REF_OBJ); @@ -188,18 +297,18 @@ static void test_reference_obj(void) // Dereference dataset object by ctor, from the location where // 'dataset' is located - DataSet dset2(dataset, &rbuf[0]); + DataSet dset2(dataset, &rbuf[0], H5R_OBJECT, dapl); // Check information in the referenced dataset sid1 = dset2.getSpace(); hssize_t n_elements = sid1.getSimpleExtentNpoints(); - verify_val((long)n_elements, 4, "DataSpace::getSimpleExtentNpoints", __LINE__, __FILE__); + verify_val((long)n_elements, 4, "DataSpace::getSimpleExtentNpoints",__LINE__,__FILE__); // Read from disk dset2.read(tbuf, PredType::NATIVE_UINT); - for(tu32=(unsigned *)tbuf,i=0; i<SPACE1_DIM1; i++,tu32++) - verify_val(*tu32, (uint32_t)(i*3), "DataSpace::getSimpleExtentNpoints", __LINE__, __FILE__); + for(tu32 = (unsigned *)tbuf, i = 0; i < SPACE1_DIM1; i++, tu32++) + verify_val(*tu32, (uint32_t)(i*3), "DataSpace::getSimpleExtentNpoints",__LINE__,__FILE__); // Close dereferenced dataset dset2.close(); @@ -209,7 +318,7 @@ static void test_reference_obj(void) // Get group's comment H5std_string read_comment1 = group.getComment(".", 10); - verify_val(read_comment1, write_comment, "Group::getComment", __LINE__, __FILE__); + verify_val(read_comment1.c_str(), write_comment, "Group::getComment",__LINE__,__FILE__); // Test that getComment handles failures gracefully try { @@ -217,96 +326,29 @@ static void test_reference_obj(void) } catch (Exception E) {} // We expect this to fail - // Test reading the name of an item in the group - - // Test getObjnameByIdx(idx) - H5std_string name; - name = group.getObjnameByIdx(0); - verify_val(name, DSET1_NAME, "Group::getObjnameByIdx", __LINE__, __FILE__); - // Test getObjnameByIdx(hsize_t idx, H5std_string& name, size_t size) - name.clear(); - ssize_t name_size = group.getObjnameByIdx(0, name, 5); - verify_val(name, "Data", "Group::getObjnameByIdx(index,(std::string)buf,buf_len)", __LINE__, __FILE__); - verify_val(name_size, DSET1_LEN, "Group::getObjnameByIdx(index,(std::string)buf,buf_len)", __LINE__, __FILE__); - - name.clear(); - name_size = group.getObjnameByIdx(0, name, name_size+1); - verify_val(name, DSET1_NAME, "Group::getObjnameByIdx(index,(std::string)buf,buf_len)", __LINE__, __FILE__); - verify_val(name_size, DSET1_LEN, "Group::getObjnameByIdx(index,(std::string)buf,buf_len)", __LINE__, __FILE__); - - // Test getObjnameByIdx(hsize_t idx, char* name, size_t size) - group.getObjnameByIdx(0, name, name_size+1); - verify_val(name, DSET1_NAME, "Group::getObjnameByIdx(index,(char*)buf,buf_len)", __LINE__, __FILE__); - verify_val(name_size, DSET1_LEN, "Group::getObjnameByIdx(index,(char*)buf,buf_len)", __LINE__, __FILE__); - -#ifndef H5_NO_DEPRECATED_SYMBOLS - // Test getting the type of objects - - // Test getObjTypeByIdx(hsize_t idx) - H5G_obj_t obj_type = group.getObjTypeByIdx(0); - verify_val(obj_type, H5G_DATASET, "Group::getObjTypeByIdx(index)", __LINE__, __FILE__); - - // Test getObjTypeByIdx(hsize_t idx, char* type_name) - obj_type = H5G_UNKNOWN; - char type_name_C[256]; - obj_type = group.getObjTypeByIdx(0, type_name_C); - verify_val(obj_type, H5G_DATASET, "Group::getObjTypeByIdx(index, (char*)name)", __LINE__, __FILE__); - verify_val((const char*)type_name_C, (const char*)"dataset", "Group::getObjTypeByIdx(index, (char*)name)", __LINE__, __FILE__); - - // Test getObjTypeByIdx(hsize_t idx, H5std_string& type_name) - obj_type = H5G_UNKNOWN; - H5std_string type_name; - obj_type = group.getObjTypeByIdx(0, type_name); - verify_val(obj_type, H5G_DATASET, "Group::getObjTypeByIdx(index, (char*)name)", __LINE__, __FILE__); - verify_val(type_name, "dataset", "Group::getObjTypeByIdx(index, (char*)name)", __LINE__, __FILE__); - -#endif // ifndef H5_NO_DEPRECATED_SYMBOLS - // Close group group.close(); - // Dereference group object using file to specify location - group.dereference(*file1, &rbuf[2]); - H5std_string read_comment2 = group.getComment(".", 10); - verify_val(read_comment2, write_comment, "Group::getComment", __LINE__, __FILE__); - group.close(); - - // Dereference group object by ctor and using dataset to specify - // location - Group new_group(dataset, &rbuf[2]); - H5std_string read_comment3 = new_group.getComment(".", 10); - verify_val(read_comment3, write_comment, "Group::getComment", __LINE__, __FILE__); - new_group.close(); - - // Dereference datatype object from the location where 'dataset' - // is located + /* + * Verify correct referenced datatype + */ + // Open datatype object dtype1.dereference(dataset, &rbuf[3]); // Verify correct datatype - H5T_class_t tclass = dtype1.getClass(); - verify_val(tclass, H5T_COMPOUND, "DataType::getClass", __LINE__, __FILE__); + H5T_class_t tclass; + tclass = dtype1.getClass(); + verify_val(tclass, H5T_COMPOUND, "DataType::getClass",__LINE__,__FILE__); int n_members = dtype1.getNmembers(); - verify_val(n_members, 3, "DataType::getNmembers", __LINE__, __FILE__); + verify_val(n_members, 3, "CompType::getNmembers",__LINE__,__FILE__); - // Close datatype + // Close all objects and file dtype1.close(); - - // Dereference datatype object by ctor, using file to specify location - DataType dtype2(*file1, &rbuf[3]); - - // Verify correct datatype - H5T_class_t tclass2 = dtype2.getClass(); - verify_val(tclass2, H5T_COMPOUND, "DataType::getClass", __LINE__, __FILE__); - - // Close datatype - dtype2.close(); - - // Close dataset and file dataset.close(); file1->close(); - // Free memory buffers + // Free allocated buffers HDfree(wbuf); HDfree(rbuf); HDfree(tbuf); @@ -314,13 +356,431 @@ static void test_reference_obj(void) PASSED(); } // end try catch (Exception E) { - issue_fail_msg("test_reference_obj()", __LINE__, __FILE__, E.getCDetailMsg()); + issue_fail_msg("test_reference_obj()",__LINE__,__FILE__, + E.getCFuncName(), E.getCDetailMsg()); } if(file1) delete file1; } // test_reference_obj() + +/**************************************************************** +** +** test_reference_group(): Test object reference functionality +** Tests for correct behavior of various routines on +** dereferenced group +** +****************************************************************/ +#define GROUPNAME "/group" +#define GROUPNAME2 "group2" +#define GROUPNAME3 "group3" +#define DSETNAME "/dset" +#define DSETNAME2 "dset2" +#define NAME_SIZE 16 + +static void +test_reference_group(void) +{ + hobj_ref_t wref; /* Reference to write */ + hobj_ref_t rref; /* Reference to read */ + const H5std_string write_comment="Foo!"; // Comments for group + + // Output message about test being performed + SUBTEST("Object Reference to Group"); + + H5File* file1 = NULL; + try { + /* + * Create file with a group and a dataset containing an object + * reference to the group + */ + + // Create file FILE1 + file1 = new H5File (FILE1, H5F_ACC_TRUNC); + + // Create scalar dataspace + DataSpace sid1; + + // Create a group + Group group = file1->createGroup(GROUPNAME); + + /* Create nested groups */ + Group group2 = group.createGroup(GROUPNAME2); + group2.close(); + group2 = group.createGroup(GROUPNAME3); + group2.close(); + + // Create bottom dataset + DataSet dset1 = group.createDataSet(DSETNAME2, PredType::NATIVE_INT, sid1); + dset1.close(); + + // Close group 1 + group.close(); + + // Create dataset + DataSet dset2 = file1->createDataSet(DSETNAME, PredType::STD_REF_OBJ, sid1); + + file1->reference(&wref, GROUPNAME); + + // Write selection to disk + dset2.write(&wref, PredType::STD_REF_OBJ); + + // Close resources + dset2.close(); + sid1.close(); + file1->close(); + + /* + * Re-open the file and test deferencing group + */ + + // Re-open file + file1->openFile(FILE1, H5F_ACC_RDWR); + + // Re-open dataset + dset1 = file1->openDataSet(DSETNAME); + + // Read in the reference + dset1.read(&rref, PredType::STD_REF_OBJ); + + // Dereference to get the group + Group refgroup(dset1, &rref); + + // Dereference group object the other way + group.dereference(dset1, &rref); + + /* + * Various queries on the group opened + */ + + // Check number of objects in the group dereferenced by constructor + hsize_t nobjs = refgroup.getNumObjs(); + verify_val(nobjs, 3, "H5Group::getNumObjs",__LINE__,__FILE__); + + // Check number of objects in the group dereferenced by ::reference + nobjs = group.getNumObjs(); + verify_val(nobjs, 3, "H5Group::getNumObjs",__LINE__,__FILE__); + + // Check getting file name given the group dereferenced via constructor + H5std_string fname = refgroup.getFileName(); + verify_val(fname, FILE1, "H5Group::getFileName",__LINE__,__FILE__); + + // Check getting file name given the group dereferenced by ::reference + fname = group.getFileName(); + verify_val(fname, FILE1, "H5Group::getFileName",__LINE__,__FILE__); + + // Unlink one of the objects in the dereferenced group, and re-check + refgroup.unlink(GROUPNAME2); + nobjs = refgroup.getNumObjs(); + verify_val(nobjs, 2, "H5Group::getNumObjs",__LINE__,__FILE__); + + // Close resources + group.close(); + refgroup.close(); + dset1.close(); + file1->close(); + + PASSED(); + } // end try + catch (Exception E) { + issue_fail_msg("test_reference_group()",__LINE__,__FILE__, + E.getCFuncName(), E.getCDetailMsg()); + } + + if(file1) + delete file1; +} /* test_reference_group() */ + +/**************************************************************** +** +** test_reference_region_1D(): Test 1-D reference functionality +** Tests 1-D references to various kinds of objects +** +****************************************************************/ +static void +test_reference_region_1D(void) +{ + hsize_t start[SPACE3_RANK]; /* Starting location of hyperslab */ + hsize_t stride[SPACE3_RANK]; /* Stride of hyperslab */ + hsize_t count[SPACE3_RANK]; /* Element count of hyperslab */ + hsize_t block[SPACE3_RANK]; /* Block size of hyperslab */ + hsize_t coord1[POINT1_NPOINTS][SPACE3_RANK]; /* Coordinates for point selection */ + hsize_t * coords; /* Coordinate buffer */ + hsize_t low[SPACE3_RANK]; /* Selection bounds */ + hsize_t high[SPACE3_RANK]; /* Selection bounds */ + int i; /* counting variables */ + + // Output message about test being performed + SUBTEST("1-D Dataset Region Reference Functions"); + + try { + hdset_reg_ref_t *wbuf, // buffer to write to disk + *rbuf; // buffer read from disk + uint8_t *dwbuf, // Buffer for writing numeric data to disk + *drbuf; // Buffer for reading numeric data from disk + + // Allocate write & read buffers + wbuf = (hdset_reg_ref_t *)HDcalloc(sizeof(hdset_reg_ref_t), (size_t)SPACE1_DIM1); + rbuf = (hdset_reg_ref_t *)HDmalloc(sizeof(hdset_reg_ref_t) * SPACE1_DIM1); + dwbuf = (uint8_t *)HDmalloc(sizeof(uint8_t) * SPACE3_DIM1); + drbuf = (uint8_t *)HDcalloc(sizeof(uint8_t), (size_t)SPACE3_DIM1); + + // Create file FILE1 + H5File file1(FILE2, H5F_ACC_TRUNC); + + // Create dataspace for datasets + hsize_t dims3[] = {SPACE3_DIM1}; + DataSpace sid3(SPACE3_RANK, dims3); + + // Create dataset access property list + PropList dapl(H5P_DATASET_ACCESS); + + // Create a dataset + DataSet dset3 = file1.createDataSet(DSET2_NAME, PredType::STD_U8LE, sid3); + + uint8_t *tu8; // Temporary pointer to uint8 data + for (tu8 = dwbuf, i = 0; i < SPACE3_DIM1; i++) + *tu8++ = i * 3; // from C test + + // Write selection to disk + dset3.write(dwbuf, PredType::STD_U8LE); + + // Close Dataset + dset3.close(); + + // Create dataspace for datasets + hsize_t dims1[] = {SPACE1_DIM1}; + DataSpace sid1(SPACE1_RANK, dims1); + + // Create a dataset + DataSet dset1 = file1.createDataSet(DSET1_NAME, PredType::STD_REF_DSETREG, sid1); + + /* + * Create references and prepare for testing + */ + + /* Select 15 2x1 hyperslabs for first reference */ + start[0] = 2; + stride[0] = 5; + count[0] = 15; + block[0] = 2; + + // Select a hyperslab region to add to the current selected region + sid3.selectHyperslab(H5S_SELECT_SET, count, start, stride, block); + + // Get and verify the number of elements in a dataspace selection + hssize_t nelms = sid3.getSelectNpoints(); + verify_val(nelms, 30, "DataSet::getRefObjType",__LINE__,__FILE__); + + // Store first dataset region + file1.reference(&wbuf[0], "/Dataset2", sid3); + + // Get and verify object type + H5O_type_t obj_type = dset1.getRefObjType(&wbuf[0], H5R_DATASET_REGION); + verify_val(obj_type, H5O_TYPE_DATASET, "DataSet::getRefObjType",__LINE__,__FILE__); + + /* Select sequence of ten points for second reference */ + coord1[0][0] = 16; + coord1[1][0] = 22; + coord1[2][0] = 38; + coord1[3][0] = 41; + coord1[4][0] = 52; + coord1[5][0] = 63; + coord1[6][0] = 70; + coord1[7][0] = 89; + coord1[8][0] = 97; + coord1[9][0] = 3; + + // Selects array elements to be included in the selection for sid3 + sid3.selectElements(H5S_SELECT_SET, (size_t)POINT1_NPOINTS, (const hsize_t *)coord1); + + // Get and verify the number of elements in a dataspace selection + nelms = sid3.getSelectNpoints(); + verify_val(nelms, 10, "DataSet::getRefObjType",__LINE__,__FILE__); + + // Store first dataset region + file1.reference(&wbuf[1], "/Dataset2", sid3); + + // Write selection to disk + dset1.write(wbuf, PredType::STD_REF_DSETREG); + + // Close disk dataspace, dataset, and file + sid1.close(); + dset1.close(); + sid3.close(); + file1.close(); + + /* + * Testing various dereference functions + */ + + // Re-open the file + file1.openFile(FILE2, H5F_ACC_RDWR); + + // Open the dataset + dset1 = file1.openDataSet("/Dataset1"); + + // Read selection from disk + dset1.read(rbuf, PredType::STD_REF_DSETREG); + + { // Test DataSet::dereference + dset3.dereference(dset1, &rbuf[0], H5R_DATASET_REGION, dapl); + + // Get and verify object type + obj_type = dset1.getRefObjType(&rbuf[0], H5R_DATASET_REGION); + verify_val(obj_type, H5O_TYPE_DATASET, "DataSet::getRefObjType",__LINE__,__FILE__); + + // Get dataspace of dset3 the verify number of elements + sid1 = dset3.getSpace(); + nelms = sid1.getSimpleExtentNpoints(); + verify_val((long)nelms, 100, "DataSpace::getSimpleExtentNpoints",__LINE__,__FILE__); + } // End of test DataSet::dereference + + { // Test DataSet constructor -by dereference + // Dereference dataset object by ctor, from the location where + // 'dset1' is located + DataSet newds(dset1, &rbuf[0], H5R_DATASET_REGION, dapl); + + // Get dataspace of newds then verify number of elements + sid1 = newds.getSpace(); + nelms = sid1.getSimpleExtentNpoints(); + verify_val((long)nelms, 100, "DataSpace::getSimpleExtentNpoints",__LINE__,__FILE__); + + // Close objects for this mini test + newds.close(); + sid1.close(); + } // End of test DataSet constructor -by dereference + + // Read from disk + dset3.read(drbuf, PredType::STD_U8LE); + + for(tu8 = (uint8_t *)drbuf, i = 0; i < SPACE3_DIM1; i++, tu8++) + verify_val(*tu8, (uint8_t)(i * 3), "DataSpace::getSimpleExtentNpoints",__LINE__,__FILE__); + + /* + * Test getting the referenced region + */ + + // Get region + DataSpace reg_sp = dset1.getRegion(&rbuf[0]); + + // Get and verify number of elements in a dataspace selection + nelms = reg_sp.getSelectNpoints(); + verify_val((long)nelms, 30, "DataSpace::getSelectNpoints",__LINE__,__FILE__); + + // Get and verify number of hyperslab blocks + nelms = reg_sp.getSelectHyperNblocks(); + verify_val((long)nelms, 15, "DataSpace::getSelectNpoints",__LINE__,__FILE__); + + /* Allocate space for the hyperslab blocks */ + coords = (hsize_t *)HDmalloc(nelms * SPACE3_RANK * sizeof(hsize_t) * 2); + + // Get the list of hyperslab blocks currently selected + reg_sp.getSelectHyperBlocklist((hsize_t)0, (hsize_t)nelms, coords); + + // Verify values in the list + verify_val(coords[0], 2, "Hyperslab Coordinates",__LINE__,__FILE__); + verify_val(coords[1], 3, "Hyperslab Coordinates",__LINE__,__FILE__); + verify_val(coords[2], 7, "Hyperslab Coordinates",__LINE__,__FILE__); + verify_val(coords[3], 8, "Hyperslab Coordinates",__LINE__,__FILE__); + verify_val(coords[4], 12, "Hyperslab Coordinates",__LINE__,__FILE__); + verify_val(coords[5], 13, "Hyperslab Coordinates",__LINE__,__FILE__); + verify_val(coords[6], 17, "Hyperslab Coordinates",__LINE__,__FILE__); + verify_val(coords[7], 18, "Hyperslab Coordinates",__LINE__,__FILE__); + verify_val(coords[8], 22, "Hyperslab Coordinates",__LINE__,__FILE__); + verify_val(coords[9], 23, "Hyperslab Coordinates",__LINE__,__FILE__); + verify_val(coords[10], 27, "Hyperslab Coordinates",__LINE__,__FILE__); + verify_val(coords[11], 28, "Hyperslab Coordinates",__LINE__,__FILE__); + verify_val(coords[12], 32, "Hyperslab Coordinates",__LINE__,__FILE__); + verify_val(coords[13], 33, "Hyperslab Coordinates",__LINE__,__FILE__); + verify_val(coords[14], 37, "Hyperslab Coordinates",__LINE__,__FILE__); + verify_val(coords[15], 38, "Hyperslab Coordinates",__LINE__,__FILE__); + verify_val(coords[16], 42, "Hyperslab Coordinates",__LINE__,__FILE__); + verify_val(coords[17], 43, "Hyperslab Coordinates",__LINE__,__FILE__); + verify_val(coords[18], 47, "Hyperslab Coordinates",__LINE__,__FILE__); + verify_val(coords[19], 48, "Hyperslab Coordinates",__LINE__,__FILE__); + verify_val(coords[20], 52, "Hyperslab Coordinates",__LINE__,__FILE__); + verify_val(coords[21], 53, "Hyperslab Coordinates",__LINE__,__FILE__); + verify_val(coords[22], 57, "Hyperslab Coordinates",__LINE__,__FILE__); + verify_val(coords[23], 58, "Hyperslab Coordinates",__LINE__,__FILE__); + verify_val(coords[24], 62, "Hyperslab Coordinates",__LINE__,__FILE__); + verify_val(coords[25], 63, "Hyperslab Coordinates",__LINE__,__FILE__); + verify_val(coords[26], 67, "Hyperslab Coordinates",__LINE__,__FILE__); + verify_val(coords[27], 68, "Hyperslab Coordinates",__LINE__,__FILE__); + verify_val(coords[28], 72, "Hyperslab Coordinates",__LINE__,__FILE__); + verify_val(coords[29], 73, "Hyperslab Coordinates",__LINE__,__FILE__); + + HDfree(coords); + + // Check boundaries + reg_sp.getSelectBounds(low, high); + verify_val(low[0], 2, "DataSpace::getSelectBounds",__LINE__,__FILE__); + verify_val(high[0], 73, "DataSpace::getSelectBounds",__LINE__,__FILE__); + + /* Close region space */ + reg_sp.close(); + + /* + * Another test on getting the referenced region + */ + + // Get region + DataSpace elm_sp = dset1.getRegion(&rbuf[1]); + + // Get and verify number of element points in the current selection + hssize_t nelmspts = elm_sp.getSelectElemNpoints(); + verify_val((long)nelmspts, 10, "DataSpace::getSelectNpoints",__LINE__,__FILE__); + + /* Allocate space for the hyperslab blocks */ + coords = (hsize_t *)HDmalloc(nelmspts * SPACE3_RANK * sizeof(hsize_t)); + + // Get the list of element points currently selected + elm_sp.getSelectElemPointlist((hsize_t)0, (hsize_t)nelmspts, coords); + + // Verify points + verify_val(coords[0], coord1[0][0], "Element Coordinates",__LINE__,__FILE__); + verify_val(coords[1], coord1[1][0], "Element Coordinates",__LINE__,__FILE__); + verify_val(coords[2], coord1[2][0], "Element Coordinates",__LINE__,__FILE__); + verify_val(coords[3], coord1[3][0], "Element Coordinates",__LINE__,__FILE__); + verify_val(coords[4], coord1[4][0], "Element Coordinates",__LINE__,__FILE__); + verify_val(coords[5], coord1[5][0], "Element Coordinates",__LINE__,__FILE__); + verify_val(coords[6], coord1[6][0], "Element Coordinates",__LINE__,__FILE__); + verify_val(coords[7], coord1[7][0], "Element Coordinates",__LINE__,__FILE__); + verify_val(coords[8], coord1[8][0], "Element Coordinates",__LINE__,__FILE__); + verify_val(coords[9], coord1[9][0], "Element Coordinates",__LINE__,__FILE__); + + HDfree(coords); + + // Check boundaries + elm_sp.getSelectBounds(low, high); + verify_val(low[0], 3, "DataSpace::getSelectBounds",__LINE__,__FILE__); + verify_val(high[0], 97, "DataSpace::getSelectBounds",__LINE__,__FILE__); + + // Close element space + elm_sp.close(); + + // Close resources + sid1.close(); + dset3.close(); + dset1.close(); + file1.close(); + + // Free memory buffers + HDfree(wbuf); + HDfree(rbuf); + HDfree(dwbuf); + HDfree(drbuf); + + PASSED(); + } // end try + catch (Exception E) { + issue_fail_msg("test_reference_region_1D()",__LINE__,__FILE__, + E.getCFuncName(), E.getCDetailMsg()); + } +} /* test_reference_region_1D() */ + + /**************************************************************** ** ** test_reference_compat(): Test basic object reference functionality. @@ -346,7 +806,10 @@ void test_reference(void) // Output message about test being performed MESSAGE(5, ("Testing References\n")); + test_reference_params(); // Test basic parameters of reference functionality test_reference_obj(); // Test basic object reference functionality + test_reference_group(); // Test group reference functionality + test_reference_region_1D(); // Test 1-D reference functionality test_reference_compat(); // Tests deprecated reference routines (not yet) } // test_reference() @@ -363,5 +826,6 @@ extern "C" void cleanup_reference(void) { HDremove(FILE1.c_str()); + HDremove(FILE2.c_str()); } |