Merge pull request #2203 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:1.10/master to 1.10/masterhdf5-1_10_6

* commit 'e0fa36bfe008c03365ce8ea94d705f8fdebccdf0': (166 commits)
  Update release date strings in README.txt and release_docs/RELEASE.txt
  Add release note about using ompio instead of romio when collective writes fail with OpenMPI.
  Fixed typos, grammatical errors, etc. Expanded entry for S3 and HDFS VFDs. Moved Mac 10.11 and 10.12 from Supported Platforms to More Platforms Tested.
  Add qualification to RELEASE.txt regarding performance improvements
  Standalone doesn't use h5test implementation.
  Add missing note
  Update COPYING file with new HDF5 license.
  Update bin/config.guess and config.sub to current version available from git.savannah.gnu.org.
  Fix include to correct memory calls - big-endian issue.
  Revert BLDLIBDIR value in junit.sh.in.
  Corrections to CMake functions
  Update version for HDF5 1.10.6 release. Remove autom4te.cache directory that shouldn't have been added.
  Remove duplicate instance
  Fix merge issue
  HDFFV-10979 - fix global name clash
  Correct clang search and java include
  Latest date first in RELEASE.txt
  Update RELEASE.txt with performance improvements and Steven Varga's bugfix.
  Update version numbers for shared lib files according to api compatibility report.
  Created hdf5_1_10_6 branch for HDF5 1.10.6 release preparation. Set version to 1.10.6-pre1. Switched default  maintainer mode to disabled and default build mode to production. Added files produced by autogen.sh to commit except for src/H5config.h.in~ and src/H5public.h~.
  ...

1 files changed, 25 insertions, 161 deletions

diff --git a/config/cmake/CTestCustom.cmake b/config/cmake/CTestCustom.cmake
index 2333f67..7ee5737 100644
--- a/config/cmake/CTestCustom.cmake
+++ b/config/cmake/CTestCustom.cmake
@@ -11,8 +11,8 @@
 #
 set (CTEST_CUSTOM_MAXIMUM_NUMBER_OF_WARNINGS 3000)
 # Allow full output to go to CDash set to 0
-SET(CTEST_CUSTOM_MAXIMUM_PASSED_TEST_OUTPUT_SIZE 50000)
-SET(CTEST_CUSTOM_MAXIMUM_FAILED_TEST_OUTPUT_SIZE 50000)
+set (CTEST_CUSTOM_MAXIMUM_PASSED_TEST_OUTPUT_SIZE 50000)
+set (CTEST_CUSTOM_MAXIMUM_FAILED_TEST_OUTPUT_SIZE 50000)
 # WARNING!  This could be a lot of output and could overwhelm CDash and the
 # MySQL DB so this might not be a good idea!
 
@@ -39,29 +39,34 @@ set (CTEST_CUSTOM_MEMCHECK_IGNORE
     H5TEST-flush2           #designed to need flush1
     H5TEST-error_test       #uses runTest.cmake
     H5TEST-err_compat       #uses runTest.cmake
-    H5TEST-links_env        #uses runTest.cmake
     H5TEST-testlibinfo      #uses grepTest.cmake
     #########
     H5TEST-clear-objects
-    H5TEST-clear-cache-objects
-    H5TEST-clear-cache_api-objects
-    H5TEST-clear-cache_image-objects
-    H5TEST-clear-cache_tagging-objects
-    H5TEST-clear-del_many_dense_attrs-objects
-    H5TEST-clear-err_compat-objects
-    H5TEST-clear-error_test-objects
-    H5TEST-clear-filenotclosed-objects
-    H5TEST-clear-flush-objects
-    H5TEST-clear-links_env-objects
-    H5TEST-clear-testflushrefresh-objects
-    H5TEST-clear-testhdf5-objects
-    H5TEST-clear-ttsafe-objects
+    H5TEST-cache-clear-objects
+    H5TEST-cache_image-clear-objects
+    H5TEST-del_many_dense_attrs-clear-objects
+    H5TEST-external_env-clear-objects
+    H5TEST-filenotclosed-clear-objects
+    H5TEST-flush-clear-objects
+    H5TEST-links_env-clear-objects
+    H5TEST-testflushrefresh-clear-objects
+    H5TEST-testhdf5-clear-objects
+    H5TEST-vds_env-clear-objects
     PERFORM_h5perform-clear-objects
-    HL_TOOLS-clear-objects
     HL_test-clear-objects
     HL_FORTRAN_test-clear-objects
     FORTRAN_testhdf5-clear-objects
+    FORTRAN_flush1-clear-objects
     CPP_testhdf5-clear-objects
+    ######### examples #########
+    EXAMPLES-clear-objects
+    CPP_ex-clear-objects
+    CPP_ex_tutr-clear-objects
+    HL_ex-clear-objects
+    f90_ex-clear-objects
+    HL_CPP_ptableTest-clear-objects
+    HL_CPP_ex_ptExampleFL-clear-objects
+    HL_FORTRAN_f90_ex-clear-objects
     ######### tools/h5clear #########
     H5CLEAR-clearall-objects
     H5CLEAR-copy_h5clear_fsm_persist_equal.h5
@@ -90,146 +95,13 @@ set (CTEST_CUSTOM_MEMCHECK_IGNORE
     ######### tools/h5diff #########
     H5DIFF-clearall-objects
     ######### tools/h5dump #########
-    H5DUMP-clearall-objects
-    H5DUMP_PACKED_BITS-clearall-objects
-    H5DUMP-XML-clearall-objects
-    H5DUMP_VDS-clearall-objects
+    H5DUMP-t128bit_float      #uses grepTest.cmake
     ######### tools/h5format_convert #########
     H5FC-clearall-objects
     ######### tools/h5import #########
     H5IMPORT-h5importtest-clear-objects
     H5IMPORT-clear-objects
     ######### tools/h5jam #########
-    H5JAM-SETUP-N_twithub_u10_c-clear-objects
-    H5JAM-SETUP-N_twithub_u10_c
-    H5JAM-N_twithub_u10_c-clear-objects
-    H5JAM-NONE_COPY-N_twithub_u10_c
-    H5JAM-CHECKFILE-N_twithub_u10_c-clear-objects
-    H5JAM-SETUP-N_twithub_u511_c-clear-objects
-    H5JAM-SETUP-N_twithub_u511_c
-    H5JAM-N_twithub_u511_c-clear-objects
-    H5JAM-NONE_COPY-N_twithub_u511_c
-    H5JAM-CHECKFILE-N_twithub_u511_c-clear-objects
-    H5JAM-SETUP-N_twithub_u512_c-clear-objects
-    H5JAM-SETUP-N_twithub_u512_c
-    H5JAM-N_twithub_u512_c-clear-objects
-    H5JAM-NONE_COPY-N_twithub_u512_c
-    H5JAM-CHECKFILE-N_twithub_u512_c-clear-objects
-    H5JAM-SETUP-N_twithub_u513_c-clear-objects
-    H5JAM-SETUP-N_twithub_u513_c
-    H5JAM-N_twithub_u513_c-clear-objects
-    H5JAM-NONE_COPY-N_twithub_u513_c
-    H5JAM-CHECKFILE-N_twithub_u513_c-clear-objects
-    H5JAM-SETUP-N_twithub513_u10_c-clear-objects
-    H5JAM-SETUP-N_twithub513_u10_c
-    H5JAM-N_twithub513_u10_c-clear-objects
-    H5JAM-NONE_COPY-N_twithub513_u10_c
-    H5JAM-CHECKFILE-N_twithub513_u10_c-clear-objects
-    H5JAM-SETUP-N_twithub513_u511_c-clear-objects
-    H5JAM-SETUP-N_twithub513_u511_c
-    H5JAM-N_twithub513_u511_c-clear-objects
-    H5JAM-NONE_COPY-N_twithub513_u511_c
-    H5JAM-CHECKFILE-N_twithub513_u511_c-clear-objects
-    H5JAM-SETUP-N_twithub513_u512_c-clear-objects
-    H5JAM-SETUP-N_twithub513_u512_c
-    H5JAM-N_twithub513_u512_c-clear-objects
-    H5JAM-NONE_COPY-N_twithub513_u512_c
-    H5JAM-CHECKFILE-N_twithub513_u512_c-clear-objects
-    H5JAM-SETUP-N_twithub513_u513_c-clear-objects
-    H5JAM-SETUP-N_twithub513_u513_c
-    H5JAM-N_twithub513_u513_c-clear-objects
-    H5JAM-NONE_COPY-N_twithub513_u513_c
-    H5JAM-CHECKFILE-N_twithub513_u513_c-clear-objects
-    H5JAM-CHECKFILE-twithub_u10_c-clear-objects
-    H5JAM-twithub_u511_c-clear-objects
-    H5JAM-CHECKFILE-twithub_u511_c-clear-objects
-    H5JAM-twithub_u512_c-clear-objects
-    H5JAM-CHECKFILE-twithub_u512_c-clear-objects
-    H5JAM-twithub_u513_c-clear-objects
-    H5JAM-CHECKFILE-twithub_u513_c-clear-objects
-    H5JAM-twithub513_u10_c-clear-objects
-    H5JAM-CHECKFILE-twithub513_u10_c-clear-objects
-    H5JAM-twithub513_u511_c-clear-objects
-    H5JAM-CHECKFILE-twithub513_u511_c-clear-objects
-    H5JAM-twithub513_u512_c-clear-objects
-    H5JAM-CHECKFILE-twithub513_u512_c-clear-objects
-    H5JAM-twithub513_u513_c-clear-objects
-    H5JAM-CHECKFILE-twithub513_u513_c-clear-objects
-    H5JAM-SETUP-twithub_tall-clear-objects
-    H5JAM-SETUP-twithub_tall
-    H5JAM-UNJAM-twithub_tall-clear-objects
-    H5JAM-UNJAM_D-twithub_tall-clear-objects
-    H5JAM-CHECKFILE-twithub_tall-clear-objects
-    H5JAM-SETUP-twithub513_tall-clear-objects
-    H5JAM-SETUP-twithub513_tall
-    H5JAM-UNJAM-twithub513_tall-clear-objects
-    H5JAM-UNJAM_D-twithub513_tall-clear-objects
-    H5JAM-CHECKFILE-twithub513_tall-clear-objects
-    H5JAM-SETUP-N_twithub_tall-clear-objects
-    H5JAM-SETUP-N_twithub_tall
-    H5JAM-UNJAM-N_twithub_tall-clear-objects
-    H5JAM-UNJAM_D-N_twithub_tall-clear-objects
-    H5JAM-CHECKFILE-N_twithub_tall-clear-objects
-    H5JAM-SETUP-N_twithub513_tall-clear-objects
-    H5JAM-SETUP-N_twithub513_tall
-    H5JAM-UNJAM-N_twithub513_tall-clear-objects
-    H5JAM-UNJAM_D-N_twithub513_tall-clear-objects
-    H5JAM-CHECKFILE-N_twithub513_tall-clear-objects
-    H5JAM-SETUP-D_twithub_tall-clear-objects
-    H5JAM-SETUP-D_twithub_tall
-    H5JAM-UNJAM-D_twithub_tall-clear-objects
-    H5JAM-UNJAM_D-D_twithub_tall-clear-objects
-    H5JAM-CHECKFILE-D_twithub_tall-clear-objects
-    H5JAM-SETUP-D_twithub513_tall-clear-objects
-    H5JAM-SETUP-D_twithub513_tall
-    H5JAM-UNJAM-D_twithub513_tall-clear-objects
-    H5JAM-UNJAM_D-D_twithub513_tall-clear-objects
-    H5JAM-CHECKFILE-D_twithub513_tall-clear-objects
-    H5JAM-CHECKFILE-ta_u513-clear-objects
-    H5JAM-twithub_u10-clear-objects
-    H5JAM-CHECKFILE-twithub_u10-clear-objects
-    H5JAM-twithub_u511-clear-objects
-    H5JAM-CHECKFILE-twithub_u511-clear-objects
-    H5JAM-twithub_u512-clear-objects
-    H5JAM-CHECKFILE-twithub_u512-clear-objects
-    H5JAM-twithub_u513-clear-objects
-    H5JAM-CHECKFILE-twithub_u513-clear-objects
-    H5JAM-twithub513_u10-clear-objects
-    H5JAM-CHECKFILE-twithub513_u10-clear-objects
-    H5JAM-twithub513_u511-clear-objects
-    H5JAM-CHECKFILE-twithub513_u511-clear-objects
-    H5JAM-twithub513_u512-clear-objects
-    H5JAM-CHECKFILE-twithub513_u512-clear-objects
-    H5JAM-twithub513_u513-clear-objects
-    H5JAM-CHECKFILE-twithub513_u513-clear-objects
-    H5JAM-twithub_u10_c-clear-objects
-    H5JAM-tall_u10-clear-objects
-    H5JAM-CHECKFILE-tall_u10-clear-objects
-    H5JAM-tall_u511-clear-objects
-    H5JAM-CHECKFILE-tall_u511-clear-objects
-    H5JAM-tall_u512-clear-objects
-    H5JAM-CHECKFILE-tall_u512-clear-objects
-    H5JAM-tall_u513-clear-objects
-    H5JAM-CHECKFILE-tall_u513-clear-objects
-    H5JAM-SETUP-ta_u10-clear-objects
-    H5JAM-SETUP-ta_u10
-    H5JAM-ta_u10-clear-objects
-    H5JAM-NONE_COPY-ta_u10
-    H5JAM-CHECKFILE-ta_u10-clear-objects
-    H5JAM-SETUP-ta_u511-clear-objects
-    H5JAM-SETUP-ta_u511
-    H5JAM-ta_u511-clear-objects
-    H5JAM-NONE_COPY-ta_u511
-    H5JAM-CHECKFILE-ta_u511-clear-objects
-    H5JAM-SETUP-ta_u512-clear-objects
-    H5JAM-SETUP-ta_u512
-    H5JAM-ta_u512-clear-objects
-    H5JAM-NONE_COPY-ta_u512
-    H5JAM-CHECKFILE-ta_u512-clear-objects
-    H5JAM-SETUP-ta_u513-clear-objects
-    H5JAM-SETUP-ta_u513
-    H5JAM-ta_u513-clear-objects
-    H5JAM-NONE_COPY-ta_u513
     ######### tools/h5ls #########
     H5LS-clearall-objects
     H5LS_VDS-clearall-objects
@@ -286,7 +158,6 @@ set (CTEST_CUSTOM_MEMCHECK_IGNORE
     H5REPACK-HDFFV-7840-clear-objects
     H5REPACK_META-meta_long_N-clear-objects
     H5REPACK_META-meta_short_N-clear-objects
-    H5REPACK_OLD-old_style_layout_short_switches-clear-objects
     H5REPACK_STAT-GS_AGGR-clear-objects
     H5REPACK_STAT-S_AGGR-clear-objects
     H5REPACK_STAT-SP_NONE-clear-objects
@@ -331,14 +202,7 @@ set (CTEST_CUSTOM_MEMCHECK_IGNORE
     H5MKGRP-clearall-objects
     ######### tools/perform #########
     PERFORM_h5perform-clearall-objects
-    ######### hl/tools/h5watch #########
+    ######### hl/tools #########
+    HL_TOOLS-clear-objects
     H5WATCH-clearall-objects
-    ######### examples #########
-    EXAMPLES-clear-objects
-    CPP_ex-clear-objects
-    CPP_ex_tutr-clear-objects
-    HL_ex-clear-objects
-    f90_ex-clear-objects
-    HL_CPP_ex_ptExampleFL-clear-objects
-    HL_FORTRAN_f90_ex-clear-objects
 )