Hdf5 1 10 merge warnings changes (#756)

* HDFFV-10865 - merge from dev, HDFArray perf fix.

* Remove duplicate setting

* Whitespace changes after clang format

* Undo version 11 clang format changes

* Merge CMake changes from develop

* test testing script merge from develop

* Update supported platforms

* PR#3 merge from develop

* Merge gcc 10 diagnostics option from develop

* Merge #318 OSX changes from develop

* Merge small changes from develop

* Minor non-space formatting changes

* #386 copyright corrections for java folder

* Merges from develop

#358 patches from vtk
#361 fix header guard spelling

* Merge updates

#358 patches from vtk
#361 fix header guard spelling

* format fix

* Fix missing underscore and make H5public.h closer to dev

* Merges from develop

#340 clang -Wformat-security warnings
#360 Fixed uninitialized warnings
header guard underscore cleanup
JNI cleanup

* format alignment

* Add missing test ref file

* Merge #380 from develop

* Finish java merges from develop

* Fix java issues with tests and javadoc

* Correct use of attribute access plist

* Remove debug code

* Remove unused variable

* Change file access to read only for java tests

* Split clang format operations.

* More javadoc comments

* Remove pre-split setting

* format source

* Change windows TS to use older VS.

* Mostly all javadoc fixes, one argument rename.

* synch file

* Merge of long double fix and compiler flags

* HDFFV-11229 merge changes from develop

* HDFFV-11229 correct test script

* HDFFV-11229 update autotools test script for two ref files

* HDFFV-11229 merge dev changes for long double display in tools

* Committing clang-format changes

* minor whitespace

* remove unneeded macro

* Committing clang-format changes

* Add "option" command for clang options

* Rework CMake add_custom to use the BYPRODUCTS argument

Update pkgconfig scripts for parallel builds.
Fix install COPYING file reference.
Remove unused round defines.
Change CMake default setting of BUILD_CPP to off.

* Fortran target depends

* Remove incorrect source attribute

* Revert define removal

* printf specifiers and VS2015 min changes

* Committing clang-format changes

* Add time struct

* TRILAB-227 and tools debug merges from develop

* Merge various changes from dev

* Issue #669 remove version from pkgcfg filename

* remove version from h5cc script

* doxygen changes merged from develop

* Committing clang-format changes

* Merge CMake fortran ninja changes from dev

* Enable fortran to gcc yaml

* Refactor Fortran CMake config tests and CMake test args

* Merge warnings files fixes from develop

Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>

2 files changed, 50 insertions, 38 deletions

diff --git a/config/cmake/HDFCXXCompilerFlags.cmake b/config/cmake/HDFCXXCompilerFlags.cmake
index 8bcfb14..64ec010 100644
--- a/config/cmake/HDFCXXCompilerFlags.cmake
+++ b/config/cmake/HDFCXXCompilerFlags.cmake
@@ -86,9 +86,11 @@ if (NOT MSVC AND NOT MINGW)
     # warnings that are emitted. If you need it, add it at configure time.
     if (CMAKE_CXX_COMPILER_ID STREQUAL "Intel")
       ADD_H5_FLAGS (HDF5_CMAKE_CXX_FLAGS "${HDF5_SOURCE_DIR}/config/intel-warnings/general")
+      if(NOT CMAKE_CXX_COMPILER_VERSION VERSION_LESS 15.0)
+        ADD_H5_FLAGS (H5_CXXFLAGS "${HDF5_SOURCE_DIR}/config/intel-warnings/15")
+      endif()
       if(NOT CMAKE_CXX_COMPILER_VERSION VERSION_LESS 18.0)
-        list (APPEND H5_CXXFLAGS "-Wextra-tokens -Wformat -Wformat-security -Wic-pointer -Wshadow")
-        list (APPEND H5_CXXFLAGS "-Wsign-compare -Wtrigraphs -Wwrite-strings")
+        ADD_H5_FLAGS (H5_CXXFLAGS "${HDF5_SOURCE_DIR}/config/intel-warnings/18")
       endif()
     elseif (CMAKE_CXX_COMPILER_ID STREQUAL "GNU")
       if (CMAKE_COMPILER_IS_GNUCXX AND CMAKE_CXX_COMPILER_LOADED
@@ -117,21 +119,20 @@ if (NOT MSVC AND NOT MINGW)
   #-----------------------------------------------------------------------------
   if (HDF5_ENABLE_DEV_WARNINGS)
     message (STATUS "....HDF5 developer group warnings are enabled")
-  #  if (CMAKE_CXX_COMPILER_ID STREQUAL "Intel")
-  #    list (APPEND H5_CXXFLAGS "-Winline -Wreorder -Wport -Wstrict-aliasing")
-  #  elseif (CMAKE_CXX_COMPILER_ID STREQUAL "GNU")
-    if (CMAKE_CXX_COMPILER_ID STREQUAL "GNU")
-      # autotools always add the C flags with the CXX flags
+    if (CMAKE_CXX_COMPILER_ID STREQUAL "Intel")
+      ADD_H5_FLAGS (H5_CXXFLAGS "${HDF5_SOURCE_DIR}/config/intel-warnings/developer-general")
+    elseif (CMAKE_CXX_COMPILER_ID STREQUAL "GNU")
+      # Use the C warnings as CXX warnings are the same
       ADD_H5_FLAGS (H5_CXXFLAGS "${HDF5_SOURCE_DIR}/config/gnu-warnings/developer-general")
-  #  elseif (CMAKE_CXX_COMPILER_ID STREQUAL "Clang")
-  #    ADD_H5_FLAGS (H5_CXXFLAGS "${HDF5_SOURCE_DIR}/config/clang-warnings/developer-general")
+    elseif (CMAKE_CXX_COMPILER_ID STREQUAL "Clang")
+      ADD_H5_FLAGS (H5_CXXFLAGS "${HDF5_SOURCE_DIR}/config/clang-warnings/developer-general")
     endif ()
   else ()
     if (CMAKE_CXX_COMPILER_ID STREQUAL "GNU")
-      # autotools always add the C flags with the CXX flags
+      # Use the C warnings as CXX warnings are the same
       ADD_H5_FLAGS (H5_CXXFLAGS "${HDF5_SOURCE_DIR}/config/gnu-warnings/no-developer-general")
-  #  elseif (CMAKE_CXX_COMPILER_ID STREQUAL "Clang")
-  #    ADD_H5_FLAGS (H5_CXXFLAGS "${HDF5_SOURCE_DIR}/config/clang-warnings/no-developer-general")
+    elseif (CMAKE_CXX_COMPILER_ID STREQUAL "Clang")
+      ADD_H5_FLAGS (H5_CXXFLAGS "${HDF5_SOURCE_DIR}/config/clang-warnings/no-developer-general")
     endif ()
   endif ()
 
@@ -139,14 +140,15 @@ if (NOT MSVC AND NOT MINGW)
     # Technically, variable-length arrays are part of the C99 standard, but
     #   we should approach them a bit cautiously... Only needed for gcc 4.X
     if (CMAKE_CXX_COMPILER_VERSION VERSION_LESS 5.0 AND CMAKE_C_COMPILER_VERSION VERSION_GREATER_EQUAL 4.8)
-      # autotools always add the C flags with the CXX flags
+      # Use the C warnings as CXX warnings are the same
       ADD_H5_FLAGS (H5_CXXFLAGS "${HDF5_SOURCE_DIR}/config/gnu-warnings/4.8-4.last")
     endif ()
 
     # Append more extra warning flags that only gcc 4.8+ knows about
     if (NOT CMAKE_CXX_COMPILER_VERSION VERSION_LESS 4.8)
-      ADD_H5_FLAGS (H5_CXXFLAGS "${HDF5_SOURCE_DIR}/config/gnu-warnings/4.8")
+      ADD_H5_FLAGS (H5_CXXFLAGS "${HDF5_SOURCE_DIR}/config/gnu-warnings/cxx-4.8")
       if (HDF5_ENABLE_DEV_WARNINGS)
+        # Use the C warnings as CXX warnings are the same
         ADD_H5_FLAGS (H5_CXXFLAGS "${HDF5_SOURCE_DIR}/config/gnu-warnings/developer-4.8")
       else ()
         ADD_H5_FLAGS (H5_CXXFLAGS "${HDF5_SOURCE_DIR}/config/gnu-warnings/no-developer-4.8")
@@ -155,8 +157,7 @@ if (NOT MSVC AND NOT MINGW)
 
     # Append more extra warning flags that only gcc 4.9+ knows about
     if (NOT CMAKE_CXX_COMPILER_VERSION VERSION_LESS 4.9)
-      # autotools always add the C flags with the CXX flags
-      ADD_H5_FLAGS (H5_CXXFLAGS "${HDF5_SOURCE_DIR}/config/gnu-warnings/4.9")
+      # Use the C warnings as CXX warnings are the same
       ADD_H5_FLAGS (H5_CXXFLAGS "${HDF5_SOURCE_DIR}/config/gnu-warnings/cxx-4.9")
     endif ()
 
@@ -173,16 +174,16 @@ if (NOT MSVC AND NOT MINGW)
 
     # Append more extra warning flags that only gcc 6.x+ knows about
     if (NOT CMAKE_CXX_COMPILER_VERSION VERSION_LESS 6.0)
-      # autotools always add the C flags with the CXX flags
+      # Use the C warnings as CXX warnings are the same
       ADD_H5_FLAGS (H5_CXXFLAGS "${HDF5_SOURCE_DIR}/config/gnu-warnings/6")
     endif ()
 
     # Append more extra warning flags that only gcc 7.x+ knows about
     if (NOT CMAKE_CXX_COMPILER_VERSION VERSION_LESS 7.0)
-      # autotools always add the C flags with the CXX flags
+      # Use the C warnings as CXX warnings are the same
       ADD_H5_FLAGS (H5_CXxFLAGS2 "${HDF5_SOURCE_DIR}/config/gnu-warnings/7")
       if (HDF5_ENABLE_DEV_WARNINGS)
-        # autotools always add the C flags with the CXX flags
+      # Use the C warnings as CXX warnings are the same
         ADD_H5_FLAGS (H5_CXXFLAGS "${HDF5_SOURCE_DIR}/config/gnu-warnings/developer-7")
       #else ()
       #  ADD_H5_FLAGS (H5_CXXFLAGS "${HDF5_SOURCE_DIR}/config/gnu-warnings/no-developer-7")
@@ -191,15 +192,15 @@ if (NOT MSVC AND NOT MINGW)
 
     # Append more extra warning flags that only gcc 8.x+ knows about
     if (NOT CMAKE_CXX_COMPILER_VERSION VERSION_LESS 8.0)
-      # autotools always add the C flags with the CXX flags
+      # Use the C warnings as CXX warnings are the same
       ADD_H5_FLAGS (H5_CXXFLAGS "${HDF5_SOURCE_DIR}/config/gnu-warnings/8")
-      #if (HDF5_ENABLE_WARNINGS_AS_ERRORS)
-      #  ADD_H5_FLAGS (H5_CXXFLAGS "${HDF5_SOURCE_DIR}/config/gnu-warnings/error-8")
-      #else ()
-      #  ADD_H5_FLAGS (H5_CXXFLAGS "${HDF5_SOURCE_DIR}/config/gnu-warnings/noerror-8")
-      #endif ()
+      if (HDF5_ENABLE_WARNINGS_AS_ERRORS)
+        ADD_H5_FLAGS (H5_CXXFLAGS "${HDF5_SOURCE_DIR}/config/gnu-warnings/error-8")
+      else ()
+        ADD_H5_FLAGS (H5_CXXFLAGS "${HDF5_SOURCE_DIR}/config/gnu-warnings/noerror-8")
+      endif ()
       if (HDF5_ENABLE_DEV_WARNINGS)
-        # autotools always add the C flags with the CXX flags
+        # Use the C warnings as CXX warnings are the same
         ADD_H5_FLAGS (H5_CXXFLAGS "${HDF5_SOURCE_DIR}/config/gnu-warnings/developer-8")
       else ()
         # autotools always add the C flags with the CXX flags
@@ -209,14 +210,26 @@ if (NOT MSVC AND NOT MINGW)
 
     # Append more extra warning flags that only gcc 9.x+ knows about
     if (NOT CMAKE_CXX_COMPILER_VERSION VERSION_LESS 9.0)
-      # autotools always add the C flags with the CXX flags
-      ADD_H5_FLAGS (H5_CXXFLAGS "${HDF5_SOURCE_DIR}/config/gnu-warnings/9")
+      # Use the C warnings as CXX warnings are the same
+      ADD_H5_FLAGS (H5_CXXFLAGS "${HDF5_SOURCE_DIR}/config/gnu-warnings/cxx-9")
     endif ()
-  endif ()
-else ()
-  if (NOT MINGW)
-    list (APPEND HDF5_CMAKE_CXX_FLAGS "/EHsc")
+
+    # Append more extra warning flags that only gcc 9.3+ knows about
+    if (NOT CMAKE_CXX_COMPILER_VERSION VERSION_LESS 9.3)
+      # do not use C warnings, gnu-warnings 9.3, no cxx warniings
+      # ADD_H5_FLAGS (H5_CXXFLAGS "${HDF5_SOURCE_DIR}/config/gnu-warnings/9.3")
     endif ()
+
+    # Append more extra warning flags that only gcc 10.x+ knows about
+    if (NOT CMAKE_CXX_COMPILER_VERSION VERSION_LESS 10.0)
+      if (HDF5_ENABLE_DEV_WARNINGS)
+        # Use the C warnings as CXX warnings are the same
+        ADD_H5_FLAGS (H5_CXXFLAGS "${HDF5_SOURCE_DIR}/config/gnu-warnings/developer-10")
+      #else ()
+      #  ADD_H5_FLAGS (H5_CXXFLAGS "${HDF5_SOURCE_DIR}/config/gnu-warnings/no-developer-10")
+      endif ()
+    endif ()
+  endif ()
 endif ()
 
 #-----------------------------------------------------------------------------
diff --git a/config/cmake/HDFCompilerFlags.cmake b/config/cmake/HDFCompilerFlags.cmake
index 0775f59..e38a92b 100644
--- a/config/cmake/HDFCompilerFlags.cmake
+++ b/config/cmake/HDFCompilerFlags.cmake
@@ -108,14 +108,13 @@ if (NOT MSVC AND NOT MINGW)
     # warnings that are emitted. If you need it, add it at configure time.
     if (CMAKE_C_COMPILER_ID STREQUAL "Intel")
       ADD_H5_FLAGS (HDF5_CMAKE_C_FLAGS "${HDF5_SOURCE_DIR}/config/intel-warnings/general")
-      list (APPEND H5_CFLAGS "-Wcomment -Wdeprecated -Wmain -Wmissing-declarations -Wmissing-prototypes -Wp64 -Wpointer-arith")
-      list (APPEND H5_CFLAGS "-Wreturn-type -Wstrict-prototypes -Wuninitialized")
-      list (APPEND H5_CFLAGS "-Wunknown-pragmas -Wunused-function -Wunused-variable")
+      if(NOT CMAKE_C_COMPILER_VERSION VERSION_LESS 15.0)
+        ADD_H5_FLAGS (H5_CFLAGS "${HDF5_SOURCE_DIR}/config/intel-warnings/15")
+      endif()
       # this is just a failsafe
       list (APPEND H5_CFLAGS "-finline-functions")
       if(NOT CMAKE_C_COMPILER_VERSION VERSION_LESS 18.0)
-        list (APPEND H5_CFLAGS "-Wextra-tokens -Wformat -Wformat-security -Wic-pointer -Wshadow")
-        list (APPEND H5_CFLAGS "-Wsign-compare -Wtrigraphs -Wwrite-strings")
+        ADD_H5_FLAGS (H5_CFLAGS "${HDF5_SOURCE_DIR}/config/intel-warnings/18")
       endif()
     elseif (CMAKE_C_COMPILER_ID STREQUAL "GNU")
       # Add general CFlags for GCC versions 4.8 and above
@@ -153,7 +152,7 @@ if (NOT MSVC AND NOT MINGW)
   if (HDF5_ENABLE_DEV_WARNINGS)
     message (STATUS "....HDF5 developer group warnings are enabled")
     if (CMAKE_C_COMPILER_ID STREQUAL "Intel")
-      list (APPEND H5_CFLAGS "-Winline -Wreorder -Wport -Wstrict-aliasing")
+      ADD_H5_FLAGS (H5_CFLAGS "${HDF5_SOURCE_DIR}/config/intel-warnings/developer-general")
     elseif (CMAKE_C_COMPILER_ID STREQUAL "GNU" AND CMAKE_C_COMPILER_VERSION VERSION_GREATER_EQUAL 4.8)
       ADD_H5_FLAGS (H5_CFLAGS "${HDF5_SOURCE_DIR}/config/gnu-warnings/developer-general")
     elseif (CMAKE_C_COMPILER_ID MATCHES "[Cc]lang")