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authorM. Scot Breitenfeld <brtnfld@hdfgroup.org>2019-02-08 18:00:14 (GMT)
committerM. Scot Breitenfeld <brtnfld@hdfgroup.org>2019-02-08 18:00:14 (GMT)
commitc752332bfd0e9c3090f3a0c02d0253cd45c2e2ce (patch)
tree9602624e089f7e560e32a40bf98773054c1573b9 /config/cmake
parent602bdd1c6ae61f845d135a5c98a90de11e8b06a7 (diff)
parent4300ca623482508d19caf427fdadce86f811e347 (diff)
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Merge branch 'develop' into parallel_vds_develop
Diffstat (limited to 'config/cmake')
-rw-r--r--config/cmake/CTestCustom.cmake11
-rw-r--r--config/cmake/ConfigureChecks.cmake5
-rw-r--r--config/cmake/ConversionTests.c24
-rw-r--r--config/cmake/H5pubconf.h.in9
-rw-r--r--config/cmake/HDF518_Examples.cmake.in106
-rw-r--r--config/cmake/HDF5Macros.cmake10
-rw-r--r--config/cmake/HDF5UseFortran.cmake20
-rw-r--r--config/cmake/HDF5_Examples.cmake.in8
-rw-r--r--config/cmake/HDFCompilerFlags.cmake6
-rw-r--r--config/cmake/jrunTest.cmake46
-rw-r--r--config/cmake/patch.xml4
-rw-r--r--config/cmake/scripts/CTestScript.cmake22
-rw-r--r--config/cmake/scripts/HDF5config.cmake6
-rw-r--r--config/cmake/scripts/HDF5options.cmake6
-rw-r--r--config/cmake/scripts/HPC/par-HDF5options.cmake126
-rw-r--r--config/cmake/scripts/HPC/ser-HDF5options.cmake119
-rw-r--r--config/cmake/vfdTest.cmake2
-rw-r--r--config/cmake/volTest.cmake2
18 files changed, 367 insertions, 165 deletions
diff --git a/config/cmake/CTestCustom.cmake b/config/cmake/CTestCustom.cmake
index 33e6d4c..27eaa56 100644
--- a/config/cmake/CTestCustom.cmake
+++ b/config/cmake/CTestCustom.cmake
@@ -41,16 +41,20 @@ set (CTEST_CUSTOM_MEMCHECK_IGNORE
H5TEST-err_compat #uses runTest.cmake
H5TEST-links_env #uses runTest.cmake
H5TEST-testlibinfo #uses grepTest.cmake
- H5TEST-clear-testhdf5-objects
+ #########
H5TEST-clear-objects
H5TEST-clear-cache-objects
H5TEST-clear-cache_api-objects
H5TEST-clear-cache_image-objects
H5TEST-clear-cache_tagging-objects
+ H5TEST-clear-del_many_dense_attrs-objects
H5TEST-clear-err_compat-objects
H5TEST-clear-error_test-objects
H5TEST-clear-filenotclosed-objects
+ H5TEST-clear-flush-objects
H5TEST-clear-links_env-objects
+ H5TEST-clear-testflushrefresh-objects
+ H5TEST-clear-testhdf5-objects
H5TEST-clear-ttsafe-objects
PERFORM_h5perform-clear-objects
HL_TOOLS-clear-objects
@@ -307,6 +311,11 @@ set (CTEST_CUSTOM_MEMCHECK_IGNORE
H5REPACK_VERIFY_LAYOUT_ALL-layout_short_switches #uses grepTest.cmake
H5REPACK-plugin
H5REPACK_CMP-plugin_zero
+ #########
+ ADD_H5_VERIFY_INVALIDBOUNDS-h5repack-latest_latest_invalid-clear-objects
+ H5REPACK_VERIFY_SUPERBLOCK-SB_IS_0-clear-objects
+ H5REPACK_VERIFY_SUPERBLOCK-SB_IS_2-clear-objects
+ H5REPACK_VERIFY_SUPERBLOCK-SB_IS_3-clear-objects
######### tools/h5stat #########
H5STAT-clearall-objects
######### tools/misc #########
diff --git a/config/cmake/ConfigureChecks.cmake b/config/cmake/ConfigureChecks.cmake
index 459346e..c1abeed 100644
--- a/config/cmake/ConfigureChecks.cmake
+++ b/config/cmake/ConfigureChecks.cmake
@@ -247,6 +247,11 @@ H5ConversionTests (${HDF_PREFIX}_LDOUBLE_TO_LLONG_ACCURATE "Checking IF correctl
#
H5ConversionTests (${HDF_PREFIX}_LLONG_TO_LDOUBLE_CORRECT "Checking IF correctly converting (unsigned) long long to long double values")
# ----------------------------------------------------------------------
+# Set the flag to indicate that the machine can accurately convert
+# some long double values
+#
+H5ConversionTests (${HDF_PREFIX}_DISABLE_SOME_LDOUBLE_CONV "Checking IF the cpu is power9 and cannot correctly converting long double values")
+# ----------------------------------------------------------------------
# Check if pointer alignments are enforced
#
H5ConversionTests (${HDF_PREFIX}_NO_ALIGNMENT_RESTRICTIONS "Checking IF alignment restrictions are strictly enforced")
diff --git a/config/cmake/ConversionTests.c b/config/cmake/ConversionTests.c
index c2748b2..6d597a0 100644
--- a/config/cmake/ConversionTests.c
+++ b/config/cmake/ConversionTests.c
@@ -287,3 +287,27 @@ main ()
#endif
+#ifdef H5_DISABLE_SOME_LDOUBLE_CONV_TEST
+
+#include <stdio.h>
+#include <stdlib.h>
+#include <string.h>
+
+int HDF_NO_UBSAN main(void)
+{
+ FILE *fp;
+ char cpu[64];
+
+ fp = popen("uname -m", "r");
+
+ fgets(cpu, sizeof(cpu)-1, fp);
+
+ pclose(fp);
+
+ if(strncmp(cpu, "ppc64le", 7) == 0)
+ return 0;
+
+ return 1;
+}
+
+#endif
diff --git a/config/cmake/H5pubconf.h.in b/config/cmake/H5pubconf.h.in
index c42d93a..273adb5 100644
--- a/config/cmake/H5pubconf.h.in
+++ b/config/cmake/H5pubconf.h.in
@@ -267,6 +267,9 @@
/* Define if we have parallel support */
#cmakedefine H5_HAVE_PARALLEL @H5_HAVE_PARALLEL@
+/* Define if both pread and pwrite exist. */
+#cmakedefine H5_HAVE_PREADWRITE @H5_HAVE_PREADWRITE@
+
/* Define to 1 if you have the <pthread.h> header file. */
#cmakedefine H5_HAVE_PTHREAD_H @H5_HAVE_PTHREAD_H@
@@ -460,6 +463,9 @@
with special algorithm. */
#cmakedefine H5_LONG_TO_LDOUBLE_SPECIAL @H5_LONG_TO_LDOUBLE_SPECIAL@
+/* Define if your system is power6 and cannot convert some long double values. */
+#cmakedefine H5_DISABLE_SOME_LDOUBLE_CONV @H5_DISABLE_SOME_LDOUBLE_CONV@
+
/* Define to the sub-directory where libtool stores uninstalled libraries. */
#cmakedefine H5_LT_OBJDIR @H5_LT_OBJDIR@
@@ -599,6 +605,9 @@
/* The size of `short', as computed by sizeof. */
#cmakedefine H5_SIZEOF_SHORT @H5_SIZEOF_SHORT@
+/* The size of `time_t', as computed by sizeof. */
+#cmakedefine H5_SIZEOF_TIME_T @H5_SIZEOF_TIME_T@
+
/* The size of `uint16_t', as computed by sizeof. */
#cmakedefine H5_SIZEOF_UINT16_T @H5_SIZEOF_UINT16_T@
diff --git a/config/cmake/HDF518_Examples.cmake.in b/config/cmake/HDF518_Examples.cmake.in
deleted file mode 100644
index ba79ef2..0000000
--- a/config/cmake/HDF518_Examples.cmake.in
+++ /dev/null
@@ -1,106 +0,0 @@
-#
-# Copyright by The HDF Group.
-# All rights reserved.
-#
-# This file is part of HDF5. The full HDF5 copyright notice, including
-# terms governing use, modification, and redistribution, is contained in
-# the COPYING file, which can be found at the root of the source code
-# distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases.
-# If you do not have access to either file, you may request a copy from
-# help@hdfgroup.org.
-#
-cmake_minimum_required (VERSION 3.10)
-###############################################################################################################
-# This script will build and run the examples from a folder
-# Execute from a command line:
-# ctest -S HDF518_Examples.cmake,OPTION=VALUE -C Release -VV -O test.log
-###############################################################################################################
-
-set(CTEST_CMAKE_GENERATOR "@CMAKE_GENERATOR@")
-if("@CMAKE_GENERATOR_TOOLSET@")
- set(CMAKE_GENERATOR_TOOLSET "@CMAKE_GENERATOR_TOOLSET@")
-endif()
-set(CTEST_DASHBOARD_ROOT ${CTEST_SCRIPT_DIRECTORY})
-
-# handle input parameters to script.
-#INSTALLDIR - HDF5-1.8 root folder
-#CTEST_CONFIGURATION_TYPE - Release, Debug, RelWithDebInfo
-#CTEST_SOURCE_NAME - name of source folder; HDF5Examples
-if(DEFINED CTEST_SCRIPT_ARG)
- # transform ctest script arguments of the form
- # script.ctest,var1=value1,var2=value2
- # to variables with the respective names set to the respective values
- string(REPLACE "," ";" script_args "${CTEST_SCRIPT_ARG}")
- foreach(current_var ${script_args})
- if("${current_var}" MATCHES "^([^=]+)=(.+)$")
- set("${CMAKE_MATCH_1}" "${CMAKE_MATCH_2}")
- endif()
- endforeach()
-endif()
-
-###################################################################
-### Following Line is one of [Release, RelWithDebInfo, Debug] #####
-set(CTEST_CONFIGURATION_TYPE "$ENV{CMAKE_CONFIG_TYPE}")
-if(NOT DEFINED CTEST_CONFIGURATION_TYPE)
- set(CTEST_CONFIGURATION_TYPE "Release")
-endif()
-set(ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DCTEST_CONFIGURATION_TYPE:STRING=${CTEST_CONFIGURATION_TYPE}")
-##################################################################
-
-if(NOT DEFINED INSTALLDIR)
- set(INSTALLDIR "C:/Program Files/HDF_Group/@HDF5_PACKAGE_NAME@/@HDF5_PACKAGE_VERSION@")
-endif()
-
-if(NOT DEFINED CTEST_SOURCE_NAME)
- set(CTEST_SOURCE_NAME "HDF5Examples")
-endif()
-
-if(NOT DEFINED HDF_LOCAL)
- set(CDASH_LOCAL "NO")
-else()
- set(CDASH_LOCAL "YES")
-endif()
-if(NOT DEFINED CTEST_SITE)
- set(CTEST_SITE "local")
-endif()
-if(NOT DEFINED CTEST_BUILD_NAME)
- set(CTEST_BUILD_NAME "examples")
-endif()
-set(BUILD_OPTIONS "${BUILD_OPTIONS} -DSITE:STRING=${CTEST_SITE} -DBUILDNAME:STRING=${CTEST_BUILD_NAME}")
-
-#TAR_SOURCE - name of tarfile
-#if(NOT DEFINED TAR_SOURCE)
-# set(CTEST_USE_TAR_SOURCE "HDF5Examples-1.2.1-Source")
-#endif()
-
-###############################################################################################################
-if(WIN32)
- set(SITE_OS_NAME "Windows")
- set(ENV{HDF5_DIR} "${INSTALLDIR}/cmake")
- set(CTEST_BINARY_NAME ${CTEST_SOURCE_NAME}\\build)
- set(CTEST_SOURCE_DIRECTORY "${CTEST_DASHBOARD_ROOT}\\${CTEST_SOURCE_NAME}")
- set(CTEST_BINARY_DIRECTORY "${CTEST_DASHBOARD_ROOT}\\${CTEST_BINARY_NAME}")
-else()
- set(ENV{HDF5_DIR} "${INSTALLDIR}/share/cmake")
- set(ENV{LD_LIBRARY_PATH} "${INSTALLDIR}/lib")
- set(CTEST_BINARY_NAME ${CTEST_SOURCE_NAME}/build)
- set(CTEST_SOURCE_DIRECTORY "${CTEST_DASHBOARD_ROOT}/${CTEST_SOURCE_NAME}")
- set(CTEST_BINARY_DIRECTORY "${CTEST_DASHBOARD_ROOT}/${CTEST_BINARY_NAME}")
-endif()
-if(${CDASH_LOCAL})
- set(BUILD_OPTIONS "${BUILD_OPTIONS} -DCDASH_LOCAL:BOOL=ON")
-endif()
-set(BUILD_OPTIONS "${BUILD_OPTIONS} -DHDF5_PACKAGE_NAME:STRING=@HDF5_PACKAGE@@HDF_PACKAGE_EXT@")
-
-###############################################################################################################
-# For any comments please contact cdashhelp@hdfgroup.org
-#
-###############################################################################################################
-
-if(WIN32)
- include(${CTEST_SCRIPT_DIRECTORY}\\HDF5_Examples_options.cmake)
- include(${CTEST_SCRIPT_DIRECTORY}\\CTestScript.cmake)
-else()
- include(${CTEST_SCRIPT_DIRECTORY}/HDF5_Examples_options.cmake)
- include(${CTEST_SCRIPT_DIRECTORY}/CTestScript.cmake)
-endif()
diff --git a/config/cmake/HDF5Macros.cmake b/config/cmake/HDF5Macros.cmake
index 6c203e2..007bc29 100644
--- a/config/cmake/HDF5Macros.cmake
+++ b/config/cmake/HDF5Macros.cmake
@@ -15,6 +15,8 @@ macro (H5_SET_LIB_OPTIONS libtarget libname libtype libpackage)
# SOVERSION passed in ARGN when shared
if (${libtype} MATCHES "SHARED")
set (PACKAGE_SOVERSION ${HDF5_${libpackage}_PACKAGE_SOVERSION})
+ set (PACKAGE_COMPATIBILITY ${H5_${libpackage}_SOVERS_INTERFACE}.0.0)
+ set (PACKAGE_CURRENT ${H5_${libpackage}_SOVERS_INTERFACE}.${H5_${libpackage}_SOVERS_MINOR}.0)
if (WIN32)
set (LIBHDF_VERSION ${HDF5_PACKAGE_VERSION_MAJOR})
else ()
@@ -26,6 +28,11 @@ macro (H5_SET_LIB_OPTIONS libtarget libname libtype libpackage)
else ()
set_target_properties (${libtarget} PROPERTIES SOVERSION ${LIBHDF_VERSION})
endif ()
+ if (CMAKE_C_OSX_CURRENT_VERSION_FLAG)
+ set_property(TARGET ${libtarget} APPEND PROPERTY
+ LINK_FLAGS "${CMAKE_C_OSX_CURRENT_VERSION_FLAG}${PACKAGE_CURRENT} ${CMAKE_C_OSX_COMPATIBILITY_VERSION_FLAG}${PACKAGE_COMPATIBILITY}"
+ )
+ endif ()
endif ()
HDF_SET_LIB_OPTIONS (${libtarget} ${LIB_OUT_NAME} ${libtype})
@@ -33,9 +40,6 @@ macro (H5_SET_LIB_OPTIONS libtarget libname libtype libpackage)
if (APPLE)
option (HDF5_BUILD_WITH_INSTALL_NAME "Build with library install_name set to the installation path" OFF)
if (HDF5_BUILD_WITH_INSTALL_NAME)
- set_property(TARGET ${libtarget} APPEND PROPERTY
- LINK_FLAGS "-current_version ${HDF5_PACKAGE_VERSION} -compatibility_version ${HDF5_PACKAGE_VERSION}"
- )
set_target_properties (${libtarget} PROPERTIES
INSTALL_NAME_DIR "${CMAKE_INSTALL_PREFIX}/lib"
BUILD_WITH_INSTALL_RPATH ${HDF5_BUILD_WITH_INSTALL_NAME}
diff --git a/config/cmake/HDF5UseFortran.cmake b/config/cmake/HDF5UseFortran.cmake
index 157befd..6b77ca4 100644
--- a/config/cmake/HDF5UseFortran.cmake
+++ b/config/cmake/HDF5UseFortran.cmake
@@ -18,16 +18,6 @@ ENABLE_LANGUAGE (Fortran)
set (HDF_PREFIX "H5")
include (CheckFortranFunctionExists)
-## Check for non-standard extenstion quadmath.h
-
-CHECK_INCLUDE_FILES(quadmath.h C_HAVE_QUADMATH)
-
-if (${C_HAVE_QUADMATH})
- set(${HDF_PREFIX}_HAVE_QUADMATH_H 1)
-else ()
- set(${HDF_PREFIX}_HAVE_QUADMATH_H 0)
-endif ()
-
# The provided CMake Fortran macros don't provide a general compile/run function
# so this one is used.
#-----------------------------------------------------------------------------
@@ -40,7 +30,7 @@ macro (FORTRAN_RUN FUNCTION_NAME SOURCE_CODE RUN_RESULT_VAR1 COMPILE_RESULT_VAR1
TRY_RUN (RUN_RESULT_VAR COMPILE_RESULT_VAR
${CMAKE_BINARY_DIR}
${CMAKE_BINARY_DIR}${CMAKE_FILES_DIRECTORY}/CMakeTmp/testFortranCompiler1.f90
- LINK_LIBRARIES "${CMAKE_REQUIRED_LIBRARIES}"
+ LINK_LIBRARIES "${HDF5_REQUIRED_LIBRARIES}"
)
if (${COMPILE_RESULT_VAR})
@@ -67,8 +57,8 @@ endmacro ()
# Read source line beginning at the line matching Input:"START" and ending at the line matching Input:"END"
macro (READ_SOURCE SOURCE_START SOURCE_END RETURN_VAR)
- file (READ "${HDF5_SOURCE_DIR}/m4/aclocal_fc.f90" SOURCE_CODE)
- string (REGEX MATCH "${SOURCE_START}[\\\t\\\n\\\r[].+]*${SOURCE_END}" SOURCE_CODE ${SOURCE_CODE})
+ file (READ "${HDF5_SOURCE_DIR}/m4/aclocal_fc.f90" SOURCE_MASTER)
+ string (REGEX MATCH "${SOURCE_START}[\\\t\\\n\\\r[].+]*${SOURCE_END}" SOURCE_CODE ${SOURCE_MASTER})
set (RETURN_VAR "${SOURCE_CODE}")
endmacro ()
@@ -367,9 +357,9 @@ ENABLE_LANGUAGE (C)
#-----------------------------------------------------------------------------
macro (C_RUN FUNCTION_NAME SOURCE_CODE RETURN_VAR)
message (STATUS "Detecting C ${FUNCTION_NAME}")
- if (CMAKE_REQUIRED_LIBRARIES)
+ if (HDF5_REQUIRED_LIBRARIES)
set (CHECK_FUNCTION_EXISTS_ADD_LIBRARIES
- "-DLINK_LIBRARIES:STRING=${CMAKE_REQUIRED_LIBRARIES}")
+ "-DLINK_LIBRARIES:STRING=${HDF5_REQUIRED_LIBRARIES}")
else ()
set (CHECK_FUNCTION_EXISTS_ADD_LIBRARIES)
endif ()
diff --git a/config/cmake/HDF5_Examples.cmake.in b/config/cmake/HDF5_Examples.cmake.in
index d30f2ab..bac174a 100644
--- a/config/cmake/HDF5_Examples.cmake.in
+++ b/config/cmake/HDF5_Examples.cmake.in
@@ -48,7 +48,11 @@ set(ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DCTEST_CONFIGURATION_TYPE:STRING=${
##################################################################
if(NOT DEFINED INSTALLDIR)
- set(INSTALLDIR "C:/Program Files/HDF_Group/@HDF5_PACKAGE_NAME@/@HDF5_PACKAGE_VERSION@")
+ if(WIN32)
+ set(INSTALLDIR "C:/Program Files/HDF_Group/@HDF5_PACKAGE_NAME@/@HDF5_PACKAGE_VERSION@")
+ else()
+ set(INSTALLDIR "@CMAKE_INSTALL_PREFIX@")
+ endif()
endif()
if(NOT DEFINED CTEST_SOURCE_NAME)
@@ -70,7 +74,7 @@ set(ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DSITE:STRING=${CTEST_SITE} -DBUILDN
#TAR_SOURCE - name of tarfile
#if(NOT DEFINED TAR_SOURCE)
-# set(CTEST_USE_TAR_SOURCE "HDF5Examples-1.10.10-Source")
+# set(CTEST_USE_TAR_SOURCE "HDF5Examples-1.12.4-Source")
#endif()
###############################################################################################################
diff --git a/config/cmake/HDFCompilerFlags.cmake b/config/cmake/HDFCompilerFlags.cmake
index 93ebc3c..0a39568 100644
--- a/config/cmake/HDFCompilerFlags.cmake
+++ b/config/cmake/HDFCompilerFlags.cmake
@@ -9,16 +9,16 @@
# If you do not have access to either file, you may request a copy from
# help@hdfgroup.org.
#
+set(CMAKE_C_STANDARD 99)
+set(CMAKE_C_STANDARD_REQUIRED TRUE)
message (STATUS "Warnings Configuration:")
+set (CMAKE_C_FLAGS "${CMAKE_C99_STANDARD_COMPILE_OPTION} ${CMAKE_C_FLAGS}")
#-----------------------------------------------------------------------------
# Compiler specific flags : Shouldn't there be compiler tests for these
#-----------------------------------------------------------------------------
if (CMAKE_COMPILER_IS_GNUCC)
set (CMAKE_C_FLAGS "${CMAKE_ANSI_CFLAGS} ${CMAKE_C_FLAGS}")
- if (NOT CYGWIN)
- set (CMAKE_C_FLAGS "${CMAKE_C_FLAGS} -std=c99")
- endif ()
if (${HDF_CFG_NAME} MATCHES "Debug")
if (NOT CMAKE_C_COMPILER_VERSION VERSION_LESS 5.0)
set (CMAKE_C_FLAGS "${CMAKE_C_FLAGS} -Og -ftrapv -fno-common")
diff --git a/config/cmake/jrunTest.cmake b/config/cmake/jrunTest.cmake
index 43aef22..23f297c 100644
--- a/config/cmake/jrunTest.cmake
+++ b/config/cmake/jrunTest.cmake
@@ -77,10 +77,10 @@ if (EXISTS ${TEST_FOLDER}/${TEST_OUTPUT}.err)
endif ()
if (NOT ERROR_APPEND)
- # append error output to the stdout output file
+ # write back to original .err file
file (WRITE ${TEST_FOLDER}/${TEST_OUTPUT}.err "${TEST_STREAM}")
else ()
- # write back to original .err file
+ # append error output to the stdout output file
file (APPEND ${TEST_FOLDER}/${TEST_OUTPUT} "${TEST_STREAM}")
endif ()
endif ()
@@ -110,8 +110,8 @@ if (TEST_MASK_ERROR)
endif ()
endif ()
-# if the return value is !=0 bail out
-if (NOT "${TEST_RESULT}" STREQUAL "${TEST_EXPECT}")
+# if the return value is !=expected bail out
+if (NOT TEST_RESULT EQUAL TEST_EXPECT)
message (STATUS "ERROR OUTPUT: ${TEST_STREAM}")
message (FATAL_ERROR "Failed: Test program ${TEST_PROGRAM} exited != 0.\n${TEST_ERROR}")
endif ()
@@ -131,33 +131,33 @@ if (NOT TEST_SKIP_COMPARE)
COMMAND ${CMAKE_COMMAND} -E compare_files ${TEST_FOLDER}/${TEST_OUTPUT} ${TEST_FOLDER}/${TEST_REFERENCE}
RESULT_VARIABLE TEST_RESULT
)
- if (NOT "${TEST_RESULT}" STREQUAL "0")
+ if (TEST_RESULT)
set (TEST_RESULT 0)
file (STRINGS ${TEST_FOLDER}/${TEST_OUTPUT} test_act)
list (LENGTH test_act len_act)
file (STRINGS ${TEST_FOLDER}/${TEST_REFERENCE} test_ref)
list (LENGTH test_ref len_ref)
- if (NOT "${len_act}" STREQUAL "0" AND NOT "${len_ref}" STREQUAL "0")
+ if (len_act GREATER 0 AND len_ref GREATER 0)
math (EXPR _FP_LEN "${len_ref} - 1")
foreach (line RANGE 0 ${_FP_LEN})
list (GET test_act ${line} str_act)
list (GET test_ref ${line} str_ref)
- if (NOT "${str_act}" STREQUAL "${str_ref}")
- if (NOT "${str_act}" STREQUAL "")
+ if (NOT ${str_act} STREQUAL ${str_ref})
+ if (NOT str_act STREQUAL "")
set (TEST_RESULT 1)
message ("line = ${line}\n***ACTUAL: ${str_act}\n****REFER: ${str_ref}\n")
endif ()
endif ()
endforeach ()
else ()
- if ("${len_act}" STREQUAL "0")
+ if (len_act EQUAL 0)
message (STATUS "COMPARE Failed: ${TEST_FOLDER}/${TEST_OUTPUT} is empty")
endif ()
- if ("${len_ref}" STREQUAL "0")
+ if (len_ref EQUAL 0)
message (STATUS "COMPARE Failed: ${TEST_FOLDER}/${TEST_REFERENCE} is empty")
endif ()
endif ()
- if (NOT "${len_act}" STREQUAL "${len_ref}")
+ if (NOT len_act EQUAL len_ref)
set (TEST_RESULT 1)
endif ()
endif ()
@@ -165,7 +165,7 @@ if (NOT TEST_SKIP_COMPARE)
message (STATUS "COMPARE Result: ${TEST_RESULT}")
# again, if return value is !=0 scream and shout
- if (NOT "${TEST_RESULT}" STREQUAL "0")
+ if (TEST_RESULT)
message (FATAL_ERROR "Failed: The output of ${TEST_OUTPUT} did not match ${TEST_REFERENCE}")
endif ()
endif ()
@@ -182,34 +182,34 @@ if (NOT TEST_SKIP_COMPARE)
COMMAND ${CMAKE_COMMAND} -E compare_files ${TEST_FOLDER}/${TEST_OUTPUT}.err ${TEST_FOLDER}/${TEST_ERRREF}
RESULT_VARIABLE TEST_RESULT
)
- if (NOT "${TEST_RESULT}" STREQUAL "0")
+ if (TEST_RESULT)
set (TEST_RESULT 0)
file (STRINGS ${TEST_FOLDER}/${TEST_OUTPUT}.err test_act)
list (LENGTH test_act len_act)
file (STRINGS ${TEST_FOLDER}/${TEST_ERRREF} test_ref)
list (LENGTH test_ref len_ref)
math (EXPR _FP_LEN "${len_ref} - 1")
- if (NOT "${len_act}" STREQUAL "0" AND NOT "${len_ref}" STREQUAL "0")
+ if (len_act GREATER 0 AND len_ref GREATER 0)
math (EXPR _FP_LEN "${len_ref} - 1")
foreach (line RANGE 0 ${_FP_LEN})
list (GET test_act ${line} str_act)
list (GET test_ref ${line} str_ref)
- if (NOT "${str_act}" STREQUAL "${str_ref}")
- if (NOT "${str_act}" STREQUAL "")
+ if (NOT ${str_act} STREQUAL ${str_ref})
+ if (NOT ${str_act} STREQUAL "")
set (TEST_RESULT 1)
message ("line = ${line}\n***ACTUAL: ${str_act}\n****REFER: ${str_ref}\n")
endif ()
endif ()
endforeach ()
else ()
- if ("${len_act}" STREQUAL "0")
+ if (len_act EQUAL 0)
message (STATUS "COMPARE Failed: ${TEST_FOLDER}/${TEST_OUTPUT}.err is empty")
endif ()
- if ("${len_ref}" STREQUAL "0")
+ if (len_ref EQUAL 0)
message (STATUS "COMPARE Failed: ${TEST_FOLDER}/${TEST_ERRREF} is empty")
endif ()
endif ()
- if (NOT "${len_act}" STREQUAL "${len_ref}")
+ if (NOT len_act EQUAL len_ref)
set (TEST_RESULT 1)
endif ()
endif ()
@@ -217,7 +217,7 @@ if (NOT TEST_SKIP_COMPARE)
message (STATUS "COMPARE Result: ${TEST_RESULT}")
# again, if return value is !=0 scream and shout
- if (NOT "${TEST_RESULT}" STREQUAL "0")
+ if (TEST_RESULT)
message (FATAL_ERROR "Failed: The error output of ${TEST_OUTPUT}.err did not match ${TEST_ERRREF}")
endif ()
endif ()
@@ -230,15 +230,15 @@ if (TEST_GREP_COMPARE)
# TEST_REFERENCE should always be matched
string (REGEX MATCH "${TEST_REFERENCE}" TEST_MATCH ${TEST_STREAM})
string (COMPARE EQUAL "${TEST_REFERENCE}" "${TEST_MATCH}" TEST_RESULT)
- if ("${TEST_RESULT}" STREQUAL "0")
+ if (NOT TEST_RESULT)
message (FATAL_ERROR "Failed: The output of ${TEST_PROGRAM} did not contain ${TEST_REFERENCE}")
endif ()
string (REGEX MATCH "${TEST_FILTER}" TEST_MATCH ${TEST_STREAM})
- if ("${TEST_EXPECT}" STREQUAL "1")
+ if (TEST_EXPECT)
# TEST_EXPECT (1) interperts TEST_FILTER as NOT to match
string (LENGTH "${TEST_MATCH}" TEST_RESULT)
- if (NOT "${TEST_RESULT}" STREQUAL "0")
+ if (TEST_RESULT)
message (FATAL_ERROR "Failed: The output of ${TEST_PROGRAM} did contain ${TEST_FILTER}")
endif ()
endif ()
diff --git a/config/cmake/patch.xml b/config/cmake/patch.xml
index 70571c5..1bdff3e 100644
--- a/config/cmake/patch.xml
+++ b/config/cmake/patch.xml
@@ -1,5 +1,5 @@
<CPackWiXPatch>
- <CPackWiXFragment Id="CM_CP_libraries.bin.hdf5.dll">
+ <CPackWiXFragment Id="CM_CP_libraries.bin.hdf5.dll">
<Environment Id="PATH"
Name="PATH"
Value="[CM_DP_libraries.bin]"
@@ -7,5 +7,5 @@
Part="last"
Action="set"
System="yes"/>
- </CPackWiXFragment>
+ </CPackWiXFragment>
</CPackWiXPatch>
diff --git a/config/cmake/scripts/CTestScript.cmake b/config/cmake/scripts/CTestScript.cmake
index 2b0ac81..0e2afc7 100644
--- a/config/cmake/scripts/CTestScript.cmake
+++ b/config/cmake/scripts/CTestScript.cmake
@@ -254,6 +254,15 @@ message (STATUS "Dashboard script configuration:\n${vars}\n")
file (APPEND ${CTEST_SCRIPT_DIRECTORY}/FailedCTest.txt "Failed Configure: ${res}\n")
endif ()
+ # On Cray XC40, configuring fails in the Fortran section when using the craype-mic-knl module.
+ # When the configure phase is done with the craype-haswell module and the build phase is done
+ # with the craype-mic-knl module, configure succeeds and tests pass on the knl compute nodes
+ # for Intel, Cray, GCC and Clang compilers. If the variables aren't set or if not
+ # cross compiling, the module switch will not occur.
+ if (CMAKE_CROSSCOMPILING AND COMPILENODE_HWCOMPILE_MODULE AND COMPUTENODE_HWCOMPILE_MODULE)
+ execute_process (COMMAND module switch ${COMPILENODE_HWCOMPILE_MODULE} ${COMPUTENODE_HWCOMPILE_MODULE})
+ endif ()
+
ctest_build (BUILD "${CTEST_BINARY_DIRECTORY}" APPEND RETURN_VALUE res NUMBER_ERRORS errval)
if (LOCAL_SUBMIT)
ctest_submit (PARTS Build)
@@ -268,7 +277,11 @@ message (STATUS "Dashboard script configuration:\n${vars}\n")
ctest_test (BUILD "${CTEST_BINARY_DIRECTORY}" APPEND ${ctest_test_args} RETURN_VALUE res)
else ()
file(STRINGS ${CTEST_BINARY_DIRECTORY}/Testing/TAG TAG_CONTENTS REGEX "^2([0-9]+)[-]([0-9]+)$")
- execute_process (COMMAND ${LOCAL_BATCH_SCRIPT_COMMAND} ${CTEST_SOURCE_DIRECTORY}/bin/batch/${LOCAL_BATCH_SCRIPT_NAME})
+ if ("${LOCAL_BATCH_SCRIPT_COMMAND}" STREQUAL "raybsub")
+ execute_process (COMMAND ${CTEST_BINARY_DIRECTORY}/${LOCAL_BATCH_SCRIPT_COMMAND} ${LOCAL_BATCH_SCRIPT_ARGS} ${CTEST_BINARY_DIRECTORY}/${LOCAL_BATCH_SCRIPT_NAME})
+ else ()
+ execute_process (COMMAND ${LOCAL_BATCH_SCRIPT_COMMAND} ${LOCAL_BATCH_SCRIPT_ARGS} ${CTEST_BINARY_DIRECTORY}/${LOCAL_BATCH_SCRIPT_NAME})
+ endif ()
message(STATUS "Check for existence of ${CTEST_BINARY_DIRECTORY}/Testing/${TAG_CONTENTS}/Test.xml")
execute_process(COMMAND ls ${CTEST_BINARY_DIRECTORY}/Testing/${TAG_CONTENTS}/Test.xml RESULT_VARIABLE result OUTPUT_QUIET ERROR_QUIET)
while(result)
@@ -281,8 +294,13 @@ message (STATUS "Dashboard script configuration:\n${vars}\n")
endif ()
message(STATUS "Found ${CTEST_BINARY_DIRECTORY}/Testing/${TAG_CONTENTS}/Test.xml for serial tests. Renaming to SerialTest.xml")
file (RENAME ${CTEST_BINARY_DIRECTORY}/Testing/${TAG_CONTENTS}/Test.xml ${CTEST_BINARY_DIRECTORY}/Testing/${TAG_CONTENTS}/SerialTest.xml)
+ file (RENAME ${CTEST_BINARY_DIRECTORY}/Testing/Temporary/LastTest_${TAG_CONTENTS}.log ${CTEST_BINARY_DIRECTORY}/Testing/Temporary/LastTest_${TAG_CONTENTS}_Serial.log)
unset(result CACHE)
- execute_process (COMMAND ${LOCAL_BATCH_SCRIPT_COMMAND} ${CTEST_SOURCE_DIRECTORY}/bin/batch/${LOCAL_BATCH_SCRIPT_PARALLEL_NAME})
+ if ("${LOCAL_BATCH_SCRIPT_COMMAND}" STREQUAL "raybsub")
+ execute_process (COMMAND ${CTEST_BINARY_DIRECTORY}/${LOCAL_BATCH_SCRIPT_COMMAND} ${LOCAL_BATCH_SCRIPT_ARGS} ${CTEST_BINARY_DIRECTORY}/${LOCAL_BATCH_SCRIPT_PARALLEL_NAME})
+ else ()
+ execute_process (COMMAND ${LOCAL_BATCH_SCRIPT_COMMAND} ${LOCAL_BATCH_SCRIPT_ARGS} ${CTEST_BINARY_DIRECTORY}/${LOCAL_BATCH_SCRIPT_PARALLEL_NAME})
+ endif ()
message(STATUS "Check for existence of ${CTEST_BINARY_DIRECTORY}/Testing/${TAG_CONTENTS}/Test.xml")
execute_process(COMMAND ls ${CTEST_BINARY_DIRECTORY}/Testing/${TAG_CONTENTS}/Test.xml RESULT_VARIABLE result OUTPUT_QUIET ERROR_QUIET)
while(result)
diff --git a/config/cmake/scripts/HDF5config.cmake b/config/cmake/scripts/HDF5config.cmake
index dd3b17c..1d8d501 100644
--- a/config/cmake/scripts/HDF5config.cmake
+++ b/config/cmake/scripts/HDF5config.cmake
@@ -43,6 +43,7 @@ set (CTEST_SOURCE_VERSEXT "")
#INSTALLDIR - HDF5-1.10.0 root folder
#CTEST_CONFIGURATION_TYPE - Release, Debug, RelWithDebInfo
#CTEST_SOURCE_NAME - name of source folder; HDF5-1.10.0
+#MODEL - CDash group name
if (DEFINED CTEST_SCRIPT_ARG)
# transform ctest script arguments of the form
# script.ctest,var1=value1,var2=value2
@@ -169,7 +170,10 @@ endif ()
###################################################################
######### Following is for submission to CDash ############
###################################################################
-set (MODEL "Experimental")
+if (NOT DEFINED MODEL)
+ set (MODEL "Experimental")
+endif ()
+
###################################################################
###################################################################
diff --git a/config/cmake/scripts/HDF5options.cmake b/config/cmake/scripts/HDF5options.cmake
index d4cc996..45877d7 100644
--- a/config/cmake/scripts/HDF5options.cmake
+++ b/config/cmake/scripts/HDF5options.cmake
@@ -33,12 +33,8 @@
#############################################################################################
#### fortran enabled ####
#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_BUILD_FORTRAN:BOOL=ON")
- ### enable Fortran 2003 depends on HDF5_BUILD_FORTRAN
-#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_ENABLE_F2003:BOOL=ON")
#### fortran disabled ####
set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_BUILD_FORTRAN:BOOL=OFF")
- ### enable Fortran 2003 depends on HDF5_BUILD_FORTRAN
-set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_ENABLE_F2003:BOOL=OFF")
#############################################################################################
#### java enabled ####
@@ -69,7 +65,7 @@ set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_ALLOW_EXTERNAL_SUPPORT:STRIN
#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_ENABLE_SZIP_ENCODING:BOOL=OFF")
#### package examples ####
-#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_PACK_EXAMPLES:BOOL=ON -DHDF5_EXAMPLES_COMPRESSED:STRING=HDF5Examples-1.10.9-Source.tar.gz -DHDF5_EXAMPLES_COMPRESSED_DIR:PATH=${CTEST_SCRIPT_DIRECTORY}")
+#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_PACK_EXAMPLES:BOOL=ON -DHDF5_EXAMPLES_COMPRESSED:STRING=HDF5Examples-1.12.4-Source.tar.gz -DHDF5_EXAMPLES_COMPRESSED_DIR:PATH=${CTEST_SCRIPT_DIRECTORY}")
#############################################################################################
### enable parallel builds
diff --git a/config/cmake/scripts/HPC/par-HDF5options.cmake b/config/cmake/scripts/HPC/par-HDF5options.cmake
new file mode 100644
index 0000000..c7b22b9
--- /dev/null
+++ b/config/cmake/scripts/HPC/par-HDF5options.cmake
@@ -0,0 +1,126 @@
+#
+# Copyright by The HDF Group.
+# All rights reserved.
+#
+# This file is part of HDF5. The full HDF5 copyright notice, including
+# terms governing use, modification, and redistribution, is contained in
+# the COPYING file, which can be found at the root of the source code
+# distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases.
+# If you do not have access to either file, you may request a copy from
+# help@hdfgroup.org.
+#
+#############################################################################################
+#### Change default configuration of options in config/cmake/cacheinit.cmake file ###
+#### format: set(ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DXXX:YY=ZZZZ") ###
+#############################################################################################
+
+### uncomment/comment and change the following lines for other configuration options
+
+#############################################################################################
+#### maximum parallel processor count for build and test ####
+set (MAX_PROC_COUNT 8)
+
+#############################################################################################
+#### alternate toolsets ####
+#set (CMAKE_GENERATOR_TOOLSET "Intel C++ Compiler 17.0")
+
+#############################################################################################
+#### Only build static libraries ####
+#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DBUILD_SHARED_LIBS:BOOL=OFF")
+#### Add PICC option on linux/mac ####
+#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DCMAKE_ANSI_CFLAGS:STRING=-fPIC")
+
+#############################################################################################
+#### fortran enabled ####
+set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_BUILD_FORTRAN:BOOL=ON")
+#### fortran disabled ####
+#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_BUILD_FORTRAN:BOOL=OFF")
+
+#############################################################################################
+#### java enabled ####
+#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_BUILD_JAVA:BOOL=ON")
+#### java disabled ####
+set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_BUILD_JAVA:BOOL=OFF")
+
+#############################################################################################
+### change install prefix (default use INSTALLDIR value)
+set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DCMAKE_INSTALL_PREFIX:PATH=${INSTALLDIR}")
+
+#############################################################################################
+#### ext libraries ####
+
+### ext libs from tgz
+#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_ALLOW_EXTERNAL_SUPPORT:STRING=TGZ -DTGZPATH:PATH=${CTEST_SCRIPT_DIRECTORY}")
+### ext libs from git
+#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_ALLOW_EXTERNAL_SUPPORT:STRING=GIT")
+### ext libs on system
+#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_ALLOW_EXTERNAL_SUPPORT:STRING=NO")
+#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DZLIB_LIBRARY:FILEPATH=some_location/lib/zlib.lib -DZLIB_INCLUDE_DIR:PATH=some_location/include")
+#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DSZIP_LIBRARY:FILEPATH=some_location/lib/szlib.lib -DSZIP_INCLUDE_DIR:PATH=some_location/include")
+
+### disable using ext zlib
+set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_ENABLE_Z_LIB_SUPPORT:BOOL=OFF")
+### disable using ext szip
+set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_ENABLE_SZIP_SUPPORT:BOOL=OFF")
+#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_ENABLE_SZIP_ENCODING:BOOL=OFF")
+
+#### package examples ####
+#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_PACK_EXAMPLES:BOOL=ON -DHDF5_EXAMPLES_COMPRESSED:STRING=HDF5Examples-1.12.4-Source.tar.gz -DHDF5_EXAMPLES_COMPRESSED_DIR:PATH=${CTEST_SCRIPT_DIRECTORY}")
+
+#############################################################################################
+### enable parallel builds
+
+set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_ENABLE_PARALLEL:BOOL=ON")
+set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_BUILD_CPP_LIB:BOOL=OFF")
+set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_BUILD_JAVA:BOOL=OFF")
+set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_ENABLE_THREADSAFE:BOOL=OFF")
+
+#############################################################################################
+### enable thread-safety builds
+
+#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_ENABLE_THREADSAFE:BOOL=ON")
+#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_ENABLE_PARALLEL:BOOL=OFF")
+#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_BUILD_CPP_LIB:BOOL=OFF")
+#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_BUILD_FORTRAN:BOOL=OFF")
+#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_BUILD_HL_LIB:BOOL=OFF")
+
+#############################################################################################
+### disable test program builds
+
+#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DBUILD_TESTING:BOOL=OFF")
+
+#############################################################################################
+### disable packaging
+
+#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_NO_PACKAGES:BOOL=ON")
+### Create install package with external libraries (szip, zlib)
+set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_PACKAGE_EXTLIBS:BOOL=ON")
+
+
+#options to run test scripts in batch commands
+set (LOCAL_BATCH_SCRIPT_COMMAND "sbatch")
+set (LOCAL_BATCH_TEST "TRUE")
+set (LOCAL_BATCH_SCRIPT_NAME "ctestS.sl")
+set (LOCAL_BATCH_SCRIPT_PARALLEL_NAME "ctestP.sl")
+set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DLOCAL_BATCH_TEST:BOOL=ON")
+set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DLOCAL_BATCH_SCRIPT_NAME:STRING=ctestS.sl")
+set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DLOCAL_BATCH_SCRIPT_PARALLEL_NAME:STRING=ctestP.sl")
+set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DMPIEXEC_EXECUTABLE:STRING=srun")
+set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DMPIEXEC_NUMPROC_FLAG:STRING=-n")
+set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DMPIEXEC_MAX_NUMPROCS:STRING=6")
+
+
+#############################################################################################
+### use a toolchain file
+
+#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DCMAKE_TOOLCHAIN_FILE:STRING=config/toolchain/crayle.cmake")
+#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DCMAKE_TOOLCHAIN_FILE:STRING=config/toolchain/intel.cmake")
+#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DCMAKE_TOOLCHAIN_FILE:STRING=config/toolchain/GCC.cmake")
+
+#some additions and alternatives to cross compile on haswell for knl
+#set (COMPILENODE_HWCOMPILE_MODULE "craype-haswell")
+#set (COMPUTENODE_HWCOMPILE_MODULE "craype-mic-knl")
+#set (SITE_BUILDNAME_SUFFIX "knl-intel17-SHARED"
+#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DLOCAL_BATCH_SCRIPT_NAME:STRING=knl_ctestS.sl")
+#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DLOCAL_BATCH_SCRIPT_PARALLEL_NAME:STRING=knl_ctestP.sl")
+#############################################################################################
diff --git a/config/cmake/scripts/HPC/ser-HDF5options.cmake b/config/cmake/scripts/HPC/ser-HDF5options.cmake
new file mode 100644
index 0000000..7f2e96f
--- /dev/null
+++ b/config/cmake/scripts/HPC/ser-HDF5options.cmake
@@ -0,0 +1,119 @@
+#
+# Copyright by The HDF Group.
+# All rights reserved.
+#
+# This file is part of HDF5. The full HDF5 copyright notice, including
+# terms governing use, modification, and redistribution, is contained in
+# the COPYING file, which can be found at the root of the source code
+# distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases.
+# If you do not have access to either file, you may request a copy from
+# help@hdfgroup.org.
+#
+#############################################################################################
+#### Change default configuration of options in config/cmake/cacheinit.cmake file ###
+#### format: set(ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DXXX:YY=ZZZZ") ###
+#############################################################################################
+
+### uncomment/comment and change the following lines for other configuration options
+
+#############################################################################################
+#### maximum parallel processor count for build and test ####
+#set (MAX_PROC_COUNT 8)
+
+#############################################################################################
+#### alternate toolsets ####
+#set (CMAKE_GENERATOR_TOOLSET "Intel C++ Compiler 17.0")
+
+#############################################################################################
+#### Only build static libraries ####
+#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DBUILD_SHARED_LIBS:BOOL=OFF")
+#### Add PICC option on linux/mac ####
+#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DCMAKE_ANSI_CFLAGS:STRING=-fPIC")
+
+#############################################################################################
+#### fortran enabled ####
+#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_BUILD_FORTRAN:BOOL=ON")
+#### fortran disabled ####
+set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_BUILD_FORTRAN:BOOL=OFF")
+
+#############################################################################################
+#### java enabled ####
+#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_BUILD_JAVA:BOOL=ON")
+#### java disabled ####
+set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_BUILD_JAVA:BOOL=OFF")
+
+#############################################################################################
+### change install prefix (default use INSTALLDIR value)
+set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DCMAKE_INSTALL_PREFIX:PATH=${INSTALLDIR}")
+
+#############################################################################################
+#### ext libraries ####
+
+### ext libs from tgz
+set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_ALLOW_EXTERNAL_SUPPORT:STRING=TGZ -DTGZPATH:PATH=${CTEST_SCRIPT_DIRECTORY}")
+### ext libs from git
+#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_ALLOW_EXTERNAL_SUPPORT:STRING=GIT")
+### ext libs on system
+#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_ALLOW_EXTERNAL_SUPPORT:STRING=NO")
+#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DZLIB_LIBRARY:FILEPATH=some_location/lib/zlib.lib -DZLIB_INCLUDE_DIR:PATH=some_location/include")
+#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DSZIP_LIBRARY:FILEPATH=some_location/lib/szlib.lib -DSZIP_INCLUDE_DIR:PATH=some_location/include")
+
+### disable using ext zlib
+#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_ENABLE_Z_LIB_SUPPORT:BOOL=OFF")
+### disable using ext szip
+#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_ENABLE_SZIP_SUPPORT:BOOL=OFF")
+#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_ENABLE_SZIP_ENCODING:BOOL=OFF")
+
+#### package examples ####
+#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_PACK_EXAMPLES:BOOL=ON -DHDF5_EXAMPLES_COMPRESSED:STRING=HDF5Examples-1.12.4-Source.tar.gz -DHDF5_EXAMPLES_COMPRESSED_DIR:PATH=${CTEST_SCRIPT_DIRECTORY}")
+
+#############################################################################################
+### enable parallel builds
+
+#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_ENABLE_PARALLEL:BOOL=ON")
+#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_BUILD_CPP_LIB:BOOL=OFF")
+#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_BUILD_JAVA:BOOL=OFF")
+#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_ENABLE_THREADSAFE:BOOL=OFF")
+
+#############################################################################################
+### enable thread-safety builds
+
+#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_ENABLE_THREADSAFE:BOOL=ON")
+#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_ENABLE_PARALLEL:BOOL=OFF")
+#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_BUILD_CPP_LIB:BOOL=OFF")
+#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_BUILD_FORTRAN:BOOL=OFF")
+#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_BUILD_HL_LIB:BOOL=OFF")
+
+#############################################################################################
+### disable test program builds
+
+#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DBUILD_TESTING:BOOL=OFF")
+
+#############################################################################################
+### disable packaging
+
+#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_NO_PACKAGES:BOOL=ON")
+### Create install package with external libraries (szip, zlib)
+set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_PACKAGE_EXTLIBS:BOOL=ON")
+
+#options to run test scripts in batch commands
+set (LOCAL_BATCH_SCRIPT_COMMAND "sbatch")
+set (LOCAL_BATCH_TEST "TRUE")
+set (LOCAL_BATCH_SCRIPT_NAME "ctestS.sl")
+set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DLOCAL_BATCH_TEST:BOOL=ON")
+set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DLOCAL_BATCH_SCRIPT_NAME:STRING=ctestS.sl")
+
+#############################################################################################
+### use a toolchain file
+
+#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DCMAKE_TOOLCHAIN_FILE:STRING=config/toolchain/intel.cmake")
+#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DCMAKE_TOOLCHAIN_FILE:STRING=config/toolchain/crayle.cmake")
+#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DCMAKE_TOOLCHAIN_FILE:STRING=config/toolchain/GCC.cmake")
+
+#some additions and alternatives to cross compile on haswell for knl
+#set (COMPILENODE_HWCOMPILE_MODULE "craype-haswell")
+#set (COMPUTENODE_HWCOMPILE_MODULE "craype-mic-knl")
+#set (SITE_BUILDNAME_SUFFIX "knl-intel17-SHARED"
+#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DLOCAL_BATCH_SCRIPT_NAME:STRING=knl_ctestS.sl")
+
+#############################################################################################
diff --git a/config/cmake/vfdTest.cmake b/config/cmake/vfdTest.cmake
index 95a4c40..b616958 100644
--- a/config/cmake/vfdTest.cmake
+++ b/config/cmake/vfdTest.cmake
@@ -60,7 +60,7 @@ if (ERROR_APPEND AND EXISTS ${TEST_FOLDER}/${TEST_OUTPUT}_${TEST_VFD}.err)
endif ()
# if the return value is !=${TEST_EXPECT} bail out
-if (NOT "${TEST_RESULT}" STREQUAL "${TEST_EXPECT}")
+if (NOT TEST_RESULT EQUAL TEST_EXPECT)
if (NOT TEST_NOERRDISPLAY)
if (EXISTS ${TEST_FOLDER}/${TEST_OUTPUT}_${TEST_VFD}.out)
file (READ ${TEST_FOLDER}/${TEST_OUTPUT}_${TEST_VFD}.out TEST_STREAM)
diff --git a/config/cmake/volTest.cmake b/config/cmake/volTest.cmake
index 27da8a5..d8c82a4 100644
--- a/config/cmake/volTest.cmake
+++ b/config/cmake/volTest.cmake
@@ -60,7 +60,7 @@ if (ERROR_APPEND AND EXISTS ${TEST_FOLDER}/${TEST_OUTPUT}.err)
endif ()
# if the return value is !=${TEST_EXPECT} bail out
-if (NOT "${TEST_RESULT}" STREQUAL "${TEST_EXPECT}")
+if (NOT TEST_RESULT EQUAL TEST_EXPECT)
if (NOT TEST_NOERRDISPLAY)
if (EXISTS ${TEST_FOLDER}/${TEST_OUTPUT}.out)
file (READ ${TEST_FOLDER}/${TEST_OUTPUT}.out TEST_STREAM)