Fixed Spelling Errors (#1166)

* fixed missed closing of a dataset

* fixed missed closing of a dataset

* fixed typo in error return

* Committing clang-format changes

* minor edits

* code format

* Committing clang-format changes

* code format

* minor edit

* switched from using MPI_count, to actual bytes written for H5FD_mpio_debug rw debugging

* Committing clang-format changes

* changed size_i in printf to reflect the I/O.

* Committing clang-format changes

* Fixed seg fault with xlf on BE with -qintsize=8

* fixed error function string

* spelling corrections via codespell, added new spell check github actions

* Committing clang-format changes

* misc

* misc

* misc

* misc

* misc

* misc

* misc

* misc

* misc

* misc

* misc

* misc

* misc

* misc

* Committing clang-format changes

* misc

* misc

* misc

* misc

* misc

* misc

* Committing clang-format changes

* misc

* work around for https://github.com/codespell-project/codespell/issues/2137

* misc

* added missing file

* misc

* misc.

* misc

* switch to using Codespell with GitHub Actions

* misc.

* misc.

* fixed more sp errors

* Fix new typos found by codespell.

* fixed proceed with precede

* fixed variable in fortran test

* fixed minnum

* updated spelling list

Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
Co-authored-by: Larry Knox <lrknox@hdfgroup.org>

11 files changed, 17 insertions, 17 deletions

diff --git a/config/BlankForm b/config/BlankForm
index ce4bf53..14131b2 100644
--- a/config/BlankForm
+++ b/config/BlankForm
@@ -61,7 +61,7 @@ fi
 #
 # PROD_CFLAGS		Flags to pass to the compiler to create a
 # PROD_CPPFLAGS		production version of the library.  These
-#			usualy exclude symbolic debugging switches
+#			usually exclude symbolic debugging switches
 #			(like `-g') and include optimization switches
 #			(like `-O').
 #
@@ -84,7 +84,7 @@ fi
 #			compiler or a descendent of gcc such as EGCS or PGCC.
 #
 # AM_CFLAGS             Flags added directly into this variable will
-#                       be propogated to the compiler wrapper scripts (h5cc,
+#                       be propagated to the compiler wrapper scripts (h5cc,
 #                       h5c++, et cetera) in addition to being used to compile 
 #                       the library.
 #
diff --git a/config/cmake/ConfigureChecks.cmake b/config/cmake/ConfigureChecks.cmake
index 483e551..43aa243 100644
--- a/config/cmake/ConfigureChecks.cmake
+++ b/config/cmake/ConfigureChecks.cmake
@@ -30,7 +30,7 @@ MARK_AS_ADVANCED (HDF5_STRICT_FORMAT_CHECKS)
 
 # ----------------------------------------------------------------------
 # Decide whether the data accuracy has higher priority during data
-# conversions.  If not, some hard conversions will still be prefered even
+# conversions.  If not, some hard conversions will still be preferred even
 # though the data may be wrong (for example, some compilers don't
 # support denormalized floating values) to maximize speed.
 #-----------------------------------------------------------------------------
diff --git a/config/cmake/H5pubconf.h.in b/config/cmake/H5pubconf.h.in
index a6b238c..1f7f4b1 100644
--- a/config/cmake/H5pubconf.h.in
+++ b/config/cmake/H5pubconf.h.in
@@ -663,7 +663,7 @@
 /* Version number of package */
 #define H5_VERSION "@HDF5_PACKAGE_VERSION_STRING@"
 
-/* Data accuracy is prefered to speed during data conversions */
+/* Data accuracy is preferred to speed during data conversions */
 #cmakedefine H5_WANT_DATA_ACCURACY @H5_WANT_DATA_ACCURACY@
 
 /* Check exception handling functions during data conversions */
diff --git a/config/cmake/HDF5UseFortran.cmake b/config/cmake/HDF5UseFortran.cmake
index 0d05e20..43e006c 100644
--- a/config/cmake/HDF5UseFortran.cmake
+++ b/config/cmake/HDF5UseFortran.cmake
@@ -134,8 +134,8 @@ FORTRAN_RUN ("REAL and INTEGER KINDs"
     PROG_OUTPUT
 )
 # dnl The output from the above program will be:
-# dnl    -- LINE 1 --  valid integer kinds (comma seperated list)
-# dnl    -- LINE 2 --  valid real kinds (comma seperated list)
+# dnl    -- LINE 1 --  valid integer kinds (comma separated list)
+# dnl    -- LINE 2 --  valid real kinds (comma separated list)
 # dnl    -- LINE 3 --  max decimal precision for reals
 # dnl    -- LINE 4 --  number of valid integer kinds
 # dnl    -- LINE 5 --  number of valid real kinds
diff --git a/config/cmake/HDFCXXCompilerFlags.cmake b/config/cmake/HDFCXXCompilerFlags.cmake
index a5af43c..e20ed6b 100644
--- a/config/cmake/HDFCXXCompilerFlags.cmake
+++ b/config/cmake/HDFCXXCompilerFlags.cmake
@@ -240,7 +240,7 @@ if (CMAKE_CXX_COMPILER_ID STREQUAL "GNU")
 
   # Append more extra warning flags that only gcc 9.3+ knows about
   if (NOT CMAKE_CXX_COMPILER_VERSION VERSION_LESS 9.3)
-    # do not use C warnings, gnu-warnings 9.3, no cxx warniings
+    # do not use C warnings, gnu-warnings 9.3, no cxx warnings
     # ADD_H5_FLAGS (H5_CXXFLAGS "${HDF5_SOURCE_DIR}/config/gnu-warnings/9.3")
   endif ()
 
diff --git a/config/cmake_ext_mod/ConfigureChecks.cmake b/config/cmake_ext_mod/ConfigureChecks.cmake
index 1dd1440..6a9c274 100644
--- a/config/cmake_ext_mod/ConfigureChecks.cmake
+++ b/config/cmake_ext_mod/ConfigureChecks.cmake
@@ -129,7 +129,7 @@ CHECK_INCLUDE_FILE_CONCAT ("netinet/in.h"    ${HDF_PREFIX}_HAVE_NETINET_IN_H)
 CHECK_INCLUDE_FILE_CONCAT ("netdb.h"         ${HDF_PREFIX}_HAVE_NETDB_H)
 CHECK_INCLUDE_FILE_CONCAT ("arpa/inet.h"     ${HDF_PREFIX}_HAVE_ARPA_INET_H)
 
-## Check for non-standard extenstion quadmath.h
+## Check for non-standard extension quadmath.h
 
 CHECK_INCLUDE_FILES(quadmath.h C_HAVE_QUADMATH)
 if (${C_HAVE_QUADMATH})
@@ -547,7 +547,7 @@ if (WINDOWS)
         message (VERBOSE "Performing Test InitOnceExecuteOnce - Success")
       endif ()
       file (APPEND ${CMAKE_BINARY_DIR}${CMAKE_FILES_DIRECTORY}/CMakeOutput.log
-        "Performing C SOURCE FILE Test InitOnceExecuteOnce succeded with the following output:\n"
+        "Performing C SOURCE FILE Test InitOnceExecuteOnce succeeded with the following output:\n"
         "${OUTPUT}\n"
         "Return value: ${HAVE_IOEO}\n")
     else ()
diff --git a/config/cmake_ext_mod/HDFUseFortran.cmake b/config/cmake_ext_mod/HDFUseFortran.cmake
index 9cbcd76..c96298f 100644
--- a/config/cmake_ext_mod/HDFUseFortran.cmake
+++ b/config/cmake_ext_mod/HDFUseFortran.cmake
@@ -22,7 +22,7 @@ if (NOT CMAKE_VERSION VERSION_LESS "3.14.0")
 endif ()
 
 #-------------------------------------------------------------------------------
-#  Fix Fortran flags if we are compiling staticly on Windows using
+#  Fix Fortran flags if we are compiling statically on Windows using
 #  Windows_MT.cmake from config/cmake/UserMacros
 #-------------------------------------------------------------------------------
 if (BUILD_STATIC_CRT_LIBS)
diff --git a/config/cmake_ext_mod/NSIS.template.in b/config/cmake_ext_mod/NSIS.template.in
index ecced05..db79466 100644
--- a/config/cmake_ext_mod/NSIS.template.in
+++ b/config/cmake_ext_mod/NSIS.template.in
@@ -849,7 +849,7 @@ Section "Uninstall"
 @CPACK_NSIS_DELETE_ICONS@
 @CPACK_NSIS_DELETE_ICONS_EXTRA@
 
-  ;Delete empty start menu parent diretories
+  ;Delete empty start menu parent directories
   StrCpy $MUI_TEMP "$SMPROGRAMS\$MUI_TEMP"
 
   startMenuDeleteLoop:
@@ -868,7 +868,7 @@ Section "Uninstall"
   Delete "$SMPROGRAMS\$MUI_TEMP\Uninstall.lnk"
 @CPACK_NSIS_DELETE_ICONS_EXTRA@
 
-  ;Delete empty start menu parent diretories
+  ;Delete empty start menu parent directories
   StrCpy $MUI_TEMP "$SMPROGRAMS\$MUI_TEMP"
 
   secondStartMenuDeleteLoop:
diff --git a/config/gnu-cxxflags b/config/gnu-cxxflags
index 56e89bc..b544813 100644
--- a/config/gnu-cxxflags
+++ b/config/gnu-cxxflags
@@ -58,7 +58,7 @@ load_gnu_arguments()
 if test "X-" = "X-$cxx_flags_set"; then
     # PathScale compiler spits out gcc version string too. Need to
     # filter it out.
-    # icc beginning with version 12 includes a "gcc version compatiblilty"
+    # icc beginning with version 12 includes a "gcc version compatibility"
     # string, causing the gcc H5_CXXFLAGS to be erroneously added.  The line
     # "grep -v 'icc version'" causes the discarding of any output
     # containing 'icc version'.  The cxx_version for icc is correctly determined
diff --git a/config/gnu-flags b/config/gnu-flags
index 89239df..fe6626d 100644
--- a/config/gnu-flags
+++ b/config/gnu-flags
@@ -58,7 +58,7 @@ load_gnu_arguments()
 if test "X-" = "X-$cc_flags_set"; then
     # PathScale compiler spits out gcc version string too. Need to
     # filter it out.
-    # icc beginning with version 12 includes a "gcc version compatiblilty"
+    # icc beginning with version 12 includes a "gcc version compatibility"
     # string, causing the gcc H5_CFLAGS to be erroneously added.  The line
     # "grep -v 'icc version'" causes the discarding of any output
     # containing 'icc version'.  The cc_version for icc is correctly determined
diff --git a/config/solaris b/config/solaris
index b7c7963..6b6b74d 100644
--- a/config/solaris
+++ b/config/solaris
@@ -39,7 +39,7 @@ if test "X-" = "X-$cc_flags_set"; then
 
   # Debug
   # NDEBUG is handled explicitly by the configure script
-  # -g is hanled by the symbols flags
+  # -g is handled by the symbols flags
   DEBUG_CFLAGS=
 
   # Symbols
@@ -101,7 +101,7 @@ if test "X-" = "X-$f9x_flags_set"; then
 
   # Debug
   # NDEBUG is handled explicitly by the configure script
-  # -g is hanled by the symbols flags
+  # -g is handled by the symbols flags
   DEBUG_FCFLAGS=
 
   # Symbols
@@ -157,7 +157,7 @@ if test -z "$cxx_flags_set"; then
 
   # Debug
   # NDEBUG is handled explicitly by the configure script
-  # -g is hanled by the symbols flags
+  # -g is handled by the symbols flags
   DEBUG_CXXFLAGS=
 
   # Symbols