TRILAB-111 fixes for parallel testing

5 files changed, 11 insertions, 36 deletions

diff --git a/config/cmake/hdf5-config.cmake.in b/config/cmake/hdf5-config.cmake.in
index e687a58..3bd9e1d 100644
--- a/config/cmake/hdf5-config.cmake.in
+++ b/config/cmake/hdf5-config.cmake.in
@@ -38,6 +38,7 @@ set (${HDF5_PACKAGE_NAME}_BUILD_CPP_LIB   @HDF5_BUILD_CPP_LIB@)
 set (${HDF5_PACKAGE_NAME}_BUILD_JAVA      @HDF5_BUILD_JAVA@)
 set (${HDF5_PACKAGE_NAME}_BUILD_TOOLS     @HDF5_BUILD_TOOLS@)
 set (${HDF5_PACKAGE_NAME}_BUILD_HL_LIB    @HDF5_BUILD_HL_LIB@)
+set (${HDF5_PACKAGE_NAME}_ENABLE_THREADSAFE @HDF5_ENABLE_THREADSAFE@)
 set (${HDF5_PACKAGE_NAME}_ENABLE_Z_LIB_SUPPORT @HDF5_ENABLE_Z_LIB_SUPPORT@)
 set (${HDF5_PACKAGE_NAME}_ENABLE_SZIP_SUPPORT  @HDF5_ENABLE_SZIP_SUPPORT@)
 set (${HDF5_PACKAGE_NAME}_ENABLE_SZIP_ENCODING @HDF5_ENABLE_SZIP_ENCODING@)
@@ -45,6 +46,8 @@ set (${HDF5_PACKAGE_NAME}_BUILD_SHARED_LIBS    @BUILD_SHARED_LIBS@)
 set (${HDF5_PACKAGE_NAME}_PACKAGE_EXTLIBS      @HDF5_PACKAGE_EXTLIBS@)
 set (${HDF5_PACKAGE_NAME}_EXPORT_LIBRARIES @HDF5_LIBRARIES_TO_EXPORT@)
 set (${HDF5_PACKAGE_NAME}_TOOLSET "@CMAKE_GENERATOR_TOOLSET@")
+set (${HDF5_PACKAGE_NAME}_DEFAULT_API_VERSION "@DEFAULT_API_VERSION@")
+set (${HDF5_PACKAGE_NAME}_PARALLEL_FILTERED_WRITES "@PARALLEL_FILTERED_WRITES@")
 
 #-----------------------------------------------------------------------------
 # Dependencies
diff --git a/config/cmake/scripts/CTestScript.cmake b/config/cmake/scripts/CTestScript.cmake
index 0e2afc7..6958f31 100644
--- a/config/cmake/scripts/CTestScript.cmake
+++ b/config/cmake/scripts/CTestScript.cmake
@@ -257,7 +257,7 @@ message (STATUS "Dashboard script configuration:\n${vars}\n")
   # On Cray XC40, configuring fails in the Fortran section when using the craype-mic-knl module.
   # When the configure phase is done with the craype-haswell module and the build phase is done
   # with the craype-mic-knl module, configure succeeds and tests pass on the knl compute nodes
-  # for Intel, Cray, GCC and Clang compilers.  If the variables aren't set or if not 
+  # for Intel, Cray, GCC and Clang compilers.  If the variables aren't set or if not
   # cross compiling, the module switch will not occur.
   if (CMAKE_CROSSCOMPILING AND COMPILENODE_HWCOMPILE_MODULE AND COMPUTENODE_HWCOMPILE_MODULE)
       execute_process (COMMAND module switch ${COMPILENODE_HWCOMPILE_MODULE} ${COMPUTENODE_HWCOMPILE_MODULE})
@@ -277,11 +277,11 @@ message (STATUS "Dashboard script configuration:\n${vars}\n")
         ctest_test (BUILD "${CTEST_BINARY_DIRECTORY}" APPEND ${ctest_test_args} RETURN_VALUE res)
       else ()
         file(STRINGS ${CTEST_BINARY_DIRECTORY}/Testing/TAG TAG_CONTENTS REGEX "^2([0-9]+)[-]([0-9]+)$")
-        if ("${LOCAL_BATCH_SCRIPT_COMMAND}" STREQUAL "raybsub")
+        if (${LOCAL_BATCH_SCRIPT_COMMAND} STREQUAL "raybsub")
           execute_process (COMMAND ${CTEST_BINARY_DIRECTORY}/${LOCAL_BATCH_SCRIPT_COMMAND} ${LOCAL_BATCH_SCRIPT_ARGS} ${CTEST_BINARY_DIRECTORY}/${LOCAL_BATCH_SCRIPT_NAME})
         else ()
           execute_process (COMMAND ${LOCAL_BATCH_SCRIPT_COMMAND} ${LOCAL_BATCH_SCRIPT_ARGS} ${CTEST_BINARY_DIRECTORY}/${LOCAL_BATCH_SCRIPT_NAME})
-        endif ()        
+        endif ()
         message(STATUS "Check for existence of ${CTEST_BINARY_DIRECTORY}/Testing/${TAG_CONTENTS}/Test.xml")
         execute_process(COMMAND ls ${CTEST_BINARY_DIRECTORY}/Testing/${TAG_CONTENTS}/Test.xml RESULT_VARIABLE result OUTPUT_QUIET ERROR_QUIET)
         while(result)
@@ -296,7 +296,7 @@ message (STATUS "Dashboard script configuration:\n${vars}\n")
           file (RENAME ${CTEST_BINARY_DIRECTORY}/Testing/${TAG_CONTENTS}/Test.xml ${CTEST_BINARY_DIRECTORY}/Testing/${TAG_CONTENTS}/SerialTest.xml)
           file (RENAME ${CTEST_BINARY_DIRECTORY}/Testing/Temporary/LastTest_${TAG_CONTENTS}.log ${CTEST_BINARY_DIRECTORY}/Testing/Temporary/LastTest_${TAG_CONTENTS}_Serial.log)
           unset(result CACHE)
-          if ("${LOCAL_BATCH_SCRIPT_COMMAND}" STREQUAL "raybsub")
+          if (${LOCAL_BATCH_SCRIPT_COMMAND} STREQUAL "raybsub")
             execute_process (COMMAND ${CTEST_BINARY_DIRECTORY}/${LOCAL_BATCH_SCRIPT_COMMAND} ${LOCAL_BATCH_SCRIPT_ARGS} ${CTEST_BINARY_DIRECTORY}/${LOCAL_BATCH_SCRIPT_PARALLEL_NAME})
           else ()
             execute_process (COMMAND ${LOCAL_BATCH_SCRIPT_COMMAND} ${LOCAL_BATCH_SCRIPT_ARGS} ${CTEST_BINARY_DIRECTORY}/${LOCAL_BATCH_SCRIPT_PARALLEL_NAME})
diff --git a/config/cmake/scripts/HPC/bsub-HDF5options.cmake b/config/cmake/scripts/HPC/bsub-HDF5options.cmake
index a862a6b..83c17aa 100644
--- a/config/cmake/scripts/HPC/bsub-HDF5options.cmake
+++ b/config/cmake/scripts/HPC/bsub-HDF5options.cmake
@@ -33,17 +33,8 @@ set (LOCAL_BATCH_TEST "TRUE")
 set (LOCAL_BATCH_SCRIPT_NAME "ctestS.lsf")
 set (LOCAL_BATCH_SCRIPT_PARALLEL_NAME "ctestP.lsf")
 set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DLOCAL_BATCH_TEST:BOOL=ON")
-set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DLOCAL_BATCH_SCRIPT_NAME:STRING=ctestS.lsf")
-set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DLOCAL_BATCH_SCRIPT_PARALLEL_NAME:STRING=ctestP.lsf")
+set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DLOCAL_BATCH_SCRIPT_NAME:STRING=${LOCAL_BATCH_SCRIPT_NAME}")
+set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DLOCAL_BATCH_SCRIPT_PARALLEL_NAME:STRING=${LOCAL_BATCH_SCRIPT_PARALLEL_NAME}")
 set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DMPIEXEC_EXECUTABLE:STRING=srun")
 set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DMPIEXEC_NUMPROC_FLAG:STRING=-n")
 set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DMPIEXEC_MAX_NUMPROCS:STRING=6")
-
-#############################################################################################
-### some additions and alternatives to cross compile on haswell for knl
-#set (COMPILENODE_HWCOMPILE_MODULE "craype-haswell")
-#set (COMPUTENODE_HWCOMPILE_MODULE "craype-mic-knl")
-#set (SITE_BUILDNAME_SUFFIX "knl-intel17-SHARED"
-#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DLOCAL_BATCH_SCRIPT_NAME:STRING=knl_ctestS.sl")
-#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DLOCAL_BATCH_SCRIPT_PARALLEL_NAME:STRING=knl_ctestP.sl")
-#############################################################################################
diff --git a/config/cmake/scripts/HPC/raybsub-HDF5options.cmake b/config/cmake/scripts/HPC/raybsub-HDF5options.cmake
index d3c8721..9775979 100644
--- a/config/cmake/scripts/HPC/raybsub-HDF5options.cmake
+++ b/config/cmake/scripts/HPC/raybsub-HDF5options.cmake
@@ -33,17 +33,8 @@ set (LOCAL_BATCH_TEST "TRUE")
 set (LOCAL_BATCH_SCRIPT_NAME "ray_ctestS.lsf")
 set (LOCAL_BATCH_SCRIPT_PARALLEL_NAME "ray_ctestP.lsf")
 set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DLOCAL_BATCH_TEST:BOOL=ON")
-set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DLOCAL_BATCH_SCRIPT_NAME:STRING=ray_ctestS.lsf")
-set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DLOCAL_BATCH_SCRIPT_PARALLEL_NAME:STRING=ray_ctestP.lsf")
+set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DLOCAL_BATCH_SCRIPT_NAME:STRING=${LOCAL_BATCH_SCRIPT_NAME}")
+set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DLOCAL_BATCH_SCRIPT_PARALLEL_NAME:STRING=${LOCAL_BATCH_SCRIPT_PARALLEL_NAME}")
 set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DMPIEXEC_EXECUTABLE:STRING=mpirun")
 set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DMPIEXEC_NUMPROC_FLAG:STRING=-np")
 set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DMPIEXEC_MAX_NUMPROCS:STRING=6")
-
-#############################################################################################
-### some additions and alternatives to cross compile on haswell for knl
-#set (COMPILENODE_HWCOMPILE_MODULE "craype-haswell")
-#set (COMPUTENODE_HWCOMPILE_MODULE "craype-mic-knl")
-#set (SITE_BUILDNAME_SUFFIX "knl-intel17-SHARED"
-#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DLOCAL_BATCH_SCRIPT_NAME:STRING=knl_ctestS.sl")
-#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DLOCAL_BATCH_SCRIPT_PARALLEL_NAME:STRING=knl_ctestP.sl")
-#############################################################################################
diff --git a/config/toolchain/crayle.cmake b/config/toolchain/crayle.cmake
index 159f43a..bf7cf69 100644
--- a/config/toolchain/crayle.cmake
+++ b/config/toolchain/crayle.cmake
@@ -8,13 +8,3 @@ set(CMAKE_Fortran_COMPILER ftn)
 
 # the following is used if cross-compiling
 set(CMAKE_CROSSCOMPILING_EMULATOR "")
-
-# option to use pre-generated H5Tinit.c file
-set(HDF5_USE_PREGEN OFF)
-# directory where H5Tinit.c file will be found
-#set(HDF5_USE_PREGEN_DIR "/lscratch1/lknox/HDF5_1_10_4/CMake-hdf5-1.10.4")
-
-# option to generate H5Tinit.c by running H5detect on knl compute node during build
-#set(HDF5_BATCH_H5DETECT ON)
-#set(HDF5_BATCH_CMD "sbatch")
-#set(HDF5_BATCH_H5DETECT_SCRIPT "knl_H5detect.sl")