diff options
author | Neil Fortner <nfortne2@hdfgroup.org> | 2015-02-24 21:53:56 (GMT) |
---|---|---|
committer | Neil Fortner <nfortne2@hdfgroup.org> | 2015-02-24 21:53:56 (GMT) |
commit | 2ca5b16a9fd79d240d5e4ebe4689033c6c7182ad (patch) | |
tree | 30e44b12fa5cfd92d8524fcf2717e19ec21e2043 /configure | |
parent | 3f72ec11cdd07c30ee0340e3c1e9b13d88495807 (diff) | |
parent | 48d9c30923a5d298670cf1f8e930c9a9624f80b9 (diff) | |
download | hdf5-2ca5b16a9fd79d240d5e4ebe4689033c6c7182ad.zip hdf5-2ca5b16a9fd79d240d5e4ebe4689033c6c7182ad.tar.gz hdf5-2ca5b16a9fd79d240d5e4ebe4689033c6c7182ad.tar.bz2 |
[svn-r26296] Merge r26050 through 26295 from trunk to vds branch.
Tested: ummon
Diffstat (limited to 'configure')
-rwxr-xr-x | configure | 2138 |
1 files changed, 356 insertions, 1782 deletions
@@ -1,7 +1,7 @@ #! /bin/sh # From configure.ac Id: configure.ac 22697 2012-08-19 14:35:47Z hdftest . # Guess values for system-dependent variables and create Makefiles. -# Generated by GNU Autoconf 2.69 for HDF5 1.9.212. +# Generated by GNU Autoconf 2.69 for HDF5 1.9.215. # # Report bugs to <help@hdfgroup.org>. # @@ -591,8 +591,8 @@ MAKEFLAGS= # Identity of this package. PACKAGE_NAME='HDF5' PACKAGE_TARNAME='hdf5' -PACKAGE_VERSION='1.9.212' -PACKAGE_STRING='HDF5 1.9.212' +PACKAGE_VERSION='1.9.215' +PACKAGE_STRING='HDF5 1.9.215' PACKAGE_BUGREPORT='help@hdfgroup.org' PACKAGE_URL='' @@ -655,8 +655,6 @@ DEFAULT_API_VERSION DEPRECATED_SYMBOLS BUILD_ALL_CONDITIONAL_FALSE BUILD_ALL_CONDITIONAL_TRUE -HL_FOR -HL DYNAMIC_DIRS ROOT CXX_VERSION @@ -728,6 +726,8 @@ TIME TR AR PERL +HL_FOR +HL CXXCPP am__fastdepCXX_FALSE am__fastdepCXX_TRUE @@ -787,7 +787,6 @@ DIRECT_VFD HAVE_DMALLOC CODESTACK INSTRUMENT -LARGEFILE HDF5_HL CXX HDF_CXX @@ -895,6 +894,7 @@ enable_unsupported enable_fortran enable_fortran2003 enable_cxx +enable_hl enable_shared enable_static with_pic @@ -905,7 +905,6 @@ enable_libtool_lock enable_static_exec enable_sharedlib_rpath enable_production -enable_largefile with_fnord with_dmalloc with_zlib @@ -922,12 +921,10 @@ enable_using_memchecker enable_parallel with_mpe enable_filters -with_default_vfd enable_direct_vfd with_default_plugindir enable_dconv_exception enable_dconv_accuracy -enable_hl enable_build_all enable_deprecated_symbols with_default_api_version @@ -1489,7 +1486,7 @@ if test "$ac_init_help" = "long"; then # Omit some internal or obsolete options to make the list less imposing. # This message is too long to be a string in the A/UX 3.1 sh. cat <<_ACEOF -\`configure' configures HDF5 1.9.212 to adapt to many kinds of systems. +\`configure' configures HDF5 1.9.215 to adapt to many kinds of systems. Usage: $0 [OPTION]... [VAR=VALUE]... @@ -1559,7 +1556,7 @@ fi if test -n "$ac_init_help"; then case $ac_init_help in - short | recursive ) echo "Configuration of HDF5 1.9.212:";; + short | recursive ) echo "Configuration of HDF5 1.9.215:";; esac cat <<\_ACEOF @@ -1577,10 +1574,11 @@ Optional Features: --disable-dependency-tracking speeds up one-time build --enable-unsupported Allow unsupported combinations of configure options - --enable-fortran Compile the Fortran 77/90/95 interface [default=no] + --enable-fortran Compile the Fortran 90/95 interface [default=no] --enable-fortran2003 Compile the Fortran 2003 interface, must also specify --enable-fortran [default=no] --enable-cxx Compile the C++ interface [default=no] + --enable-hl Enable the high-level library [default=yes] --enable-shared[=PKGS] build shared libraries [default=yes] --enable-static[=PKGS] build static libraries [default=yes] --enable-fast-install[=PKGS] @@ -1591,7 +1589,6 @@ Optional Features: --disable-sharedlib-rpath Disable use of the '=Wl,-rpath' linker option --enable-production Determines how to run the compiler. - --disable-largefile omit support for large files --enable-threadsafe Enable thread-safe capability --enable-debug=all Turn on debugging in all packages. One may also specify a comma-separated list of package names @@ -1619,14 +1616,14 @@ Optional Features: --enable-filters=all Turn on all internal I/O filters. One may also specify a comma-separated list of filters or the word no. The default is all internal I/O filters. - --enable-direct-vfd Build the Direct I/O Virtual File Driver - [default=yes] + --enable-direct-vfd Build the direct I/O virtual file driver (VFD). This + is based on the POSIX (sec2) VFD and requires the + open() call to take the O_DIRECT flag. [default=no] --enable-dconv-exception if exception handling functions is checked during data conversions [default=yes] --enable-dconv-accuracy if data accuracy is guaranteed during data conversions [default=yes] - --enable-hl Enable the high level library [default=yes] --enable-build-all Build helper programs that only developers should need [default=no] --enable-deprecated-symbols @@ -1662,8 +1659,6 @@ Optional Packages: --with-pthread=DIR Specify alternative path to Pthreads library when thread-safe capability is built --with-mpe=DIR Use MPE instrumentation [default=no] - --with-default-vfd=driver - Specify default file driver [default=sec2] --with-default-plugindir=location Specify default location for plugins [default="/usr/local/hdf5/lib/plugin"] @@ -1752,7 +1747,7 @@ fi test -n "$ac_init_help" && exit $ac_status if $ac_init_version; then cat <<\_ACEOF -HDF5 configure 1.9.212 +HDF5 configure 1.9.215 generated by GNU Autoconf 2.69 Copyright (C) 2012 Free Software Foundation, Inc. @@ -1888,13 +1883,13 @@ fi } # ac_fn_c_try_link -# ac_fn_fc_try_run LINENO -# ----------------------- -# Try to link conftest.$ac_ext, and return whether this succeeded. Assumes -# that executables *can* be run. -ac_fn_fc_try_run () +# ac_fn_fc_try_link LINENO +# ------------------------ +# Try to link conftest.$ac_ext, and return whether this succeeded. +ac_fn_fc_try_link () { as_lineno=${as_lineno-"$1"} as_lineno_stack=as_lineno_stack=$as_lineno_stack + rm -f conftest.$ac_objext conftest$ac_exeext if { { ac_try="$ac_link" case "(($ac_try" in *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;; @@ -1902,33 +1897,37 @@ case "(($ac_try" in esac eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\"" $as_echo "$ac_try_echo"; } >&5 - (eval "$ac_link") 2>&5 - ac_status=$? - $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5 - test $ac_status = 0; } && { ac_try='./conftest$ac_exeext' - { { case "(($ac_try" in - *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;; - *) ac_try_echo=$ac_try;; -esac -eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\"" -$as_echo "$ac_try_echo"; } >&5 - (eval "$ac_try") 2>&5 + (eval "$ac_link") 2>conftest.err ac_status=$? + if test -s conftest.err; then + grep -v '^ *+' conftest.err >conftest.er1 + cat conftest.er1 >&5 + mv -f conftest.er1 conftest.err + fi $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5 - test $ac_status = 0; }; }; then : + test $ac_status = 0; } && { + test -z "$ac_fc_werror_flag" || + test ! -s conftest.err + } && test -s conftest$ac_exeext && { + test "$cross_compiling" = yes || + test -x conftest$ac_exeext + }; then : ac_retval=0 else - $as_echo "$as_me: program exited with status $ac_status" >&5 - $as_echo "$as_me: failed program was:" >&5 + $as_echo "$as_me: failed program was:" >&5 sed 's/^/| /' conftest.$ac_ext >&5 - ac_retval=$ac_status + ac_retval=1 fi + # Delete the IPA/IPO (Inter Procedural Analysis/Optimization) information + # created by the PGI compiler (conftest_ipa8_conftest.oo), as it would + # interfere with the next link command; also delete a directory that is + # left behind by Apple's compiler. We do this before executing the actions. rm -rf conftest.dSYM conftest_ipa8_conftest.oo eval $as_lineno_stack; ${as_lineno_stack:+:} unset as_lineno as_fn_set_status $ac_retval -} # ac_fn_fc_try_run +} # ac_fn_fc_try_link # ac_fn_cxx_try_compile LINENO # ---------------------------- @@ -2005,13 +2004,13 @@ fi } # ac_fn_cxx_try_cpp -# ac_fn_cxx_try_run LINENO -# ------------------------ -# Try to link conftest.$ac_ext, and return whether this succeeded. Assumes -# that executables *can* be run. -ac_fn_cxx_try_run () +# ac_fn_cxx_try_link LINENO +# ------------------------- +# Try to link conftest.$ac_ext, and return whether this succeeded. +ac_fn_cxx_try_link () { as_lineno=${as_lineno-"$1"} as_lineno_stack=as_lineno_stack=$as_lineno_stack + rm -f conftest.$ac_objext conftest$ac_exeext if { { ac_try="$ac_link" case "(($ac_try" in *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;; @@ -2019,33 +2018,37 @@ case "(($ac_try" in esac eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\"" $as_echo "$ac_try_echo"; } >&5 - (eval "$ac_link") 2>&5 - ac_status=$? - $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5 - test $ac_status = 0; } && { ac_try='./conftest$ac_exeext' - { { case "(($ac_try" in - *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;; - *) ac_try_echo=$ac_try;; -esac -eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\"" -$as_echo "$ac_try_echo"; } >&5 - (eval "$ac_try") 2>&5 + (eval "$ac_link") 2>conftest.err ac_status=$? + if test -s conftest.err; then + grep -v '^ *+' conftest.err >conftest.er1 + cat conftest.er1 >&5 + mv -f conftest.er1 conftest.err + fi $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5 - test $ac_status = 0; }; }; then : + test $ac_status = 0; } && { + test -z "$ac_cxx_werror_flag" || + test ! -s conftest.err + } && test -s conftest$ac_exeext && { + test "$cross_compiling" = yes || + test -x conftest$ac_exeext + }; then : ac_retval=0 else - $as_echo "$as_me: program exited with status $ac_status" >&5 - $as_echo "$as_me: failed program was:" >&5 + $as_echo "$as_me: failed program was:" >&5 sed 's/^/| /' conftest.$ac_ext >&5 - ac_retval=$ac_status + ac_retval=1 fi + # Delete the IPA/IPO (Inter Procedural Analysis/Optimization) information + # created by the PGI compiler (conftest_ipa8_conftest.oo), as it would + # interfere with the next link command; also delete a directory that is + # left behind by Apple's compiler. We do this before executing the actions. rm -rf conftest.dSYM conftest_ipa8_conftest.oo eval $as_lineno_stack; ${as_lineno_stack:+:} unset as_lineno as_fn_set_status $ac_retval -} # ac_fn_cxx_try_run +} # ac_fn_cxx_try_link # ac_fn_c_check_header_compile LINENO HEADER VAR INCLUDES # ------------------------------------------------------- @@ -2232,98 +2235,6 @@ $as_echo "$ac_res" >&6; } } # ac_fn_c_check_func -# ac_fn_cxx_try_link LINENO -# ------------------------- -# Try to link conftest.$ac_ext, and return whether this succeeded. -ac_fn_cxx_try_link () -{ - as_lineno=${as_lineno-"$1"} as_lineno_stack=as_lineno_stack=$as_lineno_stack - rm -f conftest.$ac_objext conftest$ac_exeext - if { { ac_try="$ac_link" -case "(($ac_try" in - *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;; - *) ac_try_echo=$ac_try;; -esac -eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\"" -$as_echo "$ac_try_echo"; } >&5 - (eval "$ac_link") 2>conftest.err - ac_status=$? - if test -s conftest.err; then - grep -v '^ *+' conftest.err >conftest.er1 - cat conftest.er1 >&5 - mv -f conftest.er1 conftest.err - fi - $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5 - test $ac_status = 0; } && { - test -z "$ac_cxx_werror_flag" || - test ! -s conftest.err - } && test -s conftest$ac_exeext && { - test "$cross_compiling" = yes || - test -x conftest$ac_exeext - }; then : - ac_retval=0 -else - $as_echo "$as_me: failed program was:" >&5 -sed 's/^/| /' conftest.$ac_ext >&5 - - ac_retval=1 -fi - # Delete the IPA/IPO (Inter Procedural Analysis/Optimization) information - # created by the PGI compiler (conftest_ipa8_conftest.oo), as it would - # interfere with the next link command; also delete a directory that is - # left behind by Apple's compiler. We do this before executing the actions. - rm -rf conftest.dSYM conftest_ipa8_conftest.oo - eval $as_lineno_stack; ${as_lineno_stack:+:} unset as_lineno - as_fn_set_status $ac_retval - -} # ac_fn_cxx_try_link - -# ac_fn_fc_try_link LINENO -# ------------------------ -# Try to link conftest.$ac_ext, and return whether this succeeded. -ac_fn_fc_try_link () -{ - as_lineno=${as_lineno-"$1"} as_lineno_stack=as_lineno_stack=$as_lineno_stack - rm -f conftest.$ac_objext conftest$ac_exeext - if { { ac_try="$ac_link" -case "(($ac_try" in - *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;; - *) ac_try_echo=$ac_try;; -esac -eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\"" -$as_echo "$ac_try_echo"; } >&5 - (eval "$ac_link") 2>conftest.err - ac_status=$? - if test -s conftest.err; then - grep -v '^ *+' conftest.err >conftest.er1 - cat conftest.er1 >&5 - mv -f conftest.er1 conftest.err - fi - $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5 - test $ac_status = 0; } && { - test -z "$ac_fc_werror_flag" || - test ! -s conftest.err - } && test -s conftest$ac_exeext && { - test "$cross_compiling" = yes || - test -x conftest$ac_exeext - }; then : - ac_retval=0 -else - $as_echo "$as_me: failed program was:" >&5 -sed 's/^/| /' conftest.$ac_ext >&5 - - ac_retval=1 -fi - # Delete the IPA/IPO (Inter Procedural Analysis/Optimization) information - # created by the PGI compiler (conftest_ipa8_conftest.oo), as it would - # interfere with the next link command; also delete a directory that is - # left behind by Apple's compiler. We do this before executing the actions. - rm -rf conftest.dSYM conftest_ipa8_conftest.oo - eval $as_lineno_stack; ${as_lineno_stack:+:} unset as_lineno - as_fn_set_status $ac_retval - -} # ac_fn_fc_try_link - # ac_fn_c_check_header_mongrel LINENO HEADER VAR INCLUDES # ------------------------------------------------------- # Tests whether HEADER exists, giving a warning if it cannot be compiled using @@ -2769,84 +2680,11 @@ $as_echo "$ac_res" >&6; } eval $as_lineno_stack; ${as_lineno_stack:+:} unset as_lineno } # ac_fn_c_check_decl - -# ac_fn_c_check_member LINENO AGGR MEMBER VAR INCLUDES -# ---------------------------------------------------- -# Tries to find if the field MEMBER exists in type AGGR, after including -# INCLUDES, setting cache variable VAR accordingly. -ac_fn_c_check_member () -{ - as_lineno=${as_lineno-"$1"} as_lineno_stack=as_lineno_stack=$as_lineno_stack - { $as_echo "$as_me:${as_lineno-$LINENO}: checking for $2.$3" >&5 -$as_echo_n "checking for $2.$3... " >&6; } -if eval \${$4+:} false; then : - $as_echo_n "(cached) " >&6 -else - cat confdefs.h - <<_ACEOF >conftest.$ac_ext -/* end confdefs.h. */ -$5 -#ifdef FC_DUMMY_MAIN -#ifndef FC_DUMMY_MAIN_EQ_F77 -# ifdef __cplusplus - extern "C" -# endif - int FC_DUMMY_MAIN() { return 1; } -#endif -#endif -int -main () -{ -static $2 ac_aggr; -if (ac_aggr.$3) -return 0; - ; - return 0; -} -_ACEOF -if ac_fn_c_try_compile "$LINENO"; then : - eval "$4=yes" -else - cat confdefs.h - <<_ACEOF >conftest.$ac_ext -/* end confdefs.h. */ -$5 -#ifdef FC_DUMMY_MAIN -#ifndef FC_DUMMY_MAIN_EQ_F77 -# ifdef __cplusplus - extern "C" -# endif - int FC_DUMMY_MAIN() { return 1; } -#endif -#endif -int -main () -{ -static $2 ac_aggr; -if (sizeof ac_aggr.$3) -return 0; - ; - return 0; -} -_ACEOF -if ac_fn_c_try_compile "$LINENO"; then : - eval "$4=yes" -else - eval "$4=no" -fi -rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext -fi -rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext -fi -eval ac_res=\$$4 - { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_res" >&5 -$as_echo "$ac_res" >&6; } - eval $as_lineno_stack; ${as_lineno_stack:+:} unset as_lineno - -} # ac_fn_c_check_member cat >config.log <<_ACEOF This file contains any messages produced by compilers while running configure, to aid debugging if configure makes a mistake. -It was created by HDF5 $as_me 1.9.212, which was +It was created by HDF5 $as_me 1.9.215, which was generated by GNU Autoconf 2.69. Invocation command line was $ $0 $@ @@ -3717,7 +3555,7 @@ fi # Define the identity of the package. PACKAGE='hdf5' - VERSION='1.9.212' + VERSION='1.9.215' cat >>confdefs.h <<_ACEOF @@ -4050,7 +3888,6 @@ $as_echo "done" >&6; } ## HDF_CXX: whether C++ is enabled. Default no. ## CXX: C++ compiler. ## HDF5_HL: whether high-level library is enabled. Default is yes. -## LARGEFILE: whether largefile support is enabled. Default yes. ## INSTRUMENT: whether INSTRUMENT is enabled. No default set here. ## CODESTACK: whether CODESTACK is enabled. Default no. ## HAVE_DMALLOC: whether system has dmalloc support. Default no. @@ -4071,7 +3908,6 @@ $as_echo "done" >&6; } HDF_CXX=no HDF_CXX=no HDF5_HL=yes - LARGEFILE=yes CODESTACK=no HAVE_DMALLOC=no @@ -5353,14 +5189,13 @@ if test "X$HDF_FORTRAN2003" = "Xyes" && test "X$HDF_FORTRAN" = "Xno"; then echo "no" as_fn_error $? "--enable-fortran must be used with --enable-fortran2003" "$LINENO" 5 else - echo "yes" + if test "X$HDF_FORTRAN2003" = "Xyes" && test "X$HDF_FORTRAN" = "Xyes"; then + echo "yes" + else + echo "no" + fi fi -HAVE_SIZEOF="no" -HAVE_C_SIZEOF="no" -HAVE_STORAGE_SIZE="no" -FORTRAN_DEFAULT_REALisDBLE="no" - if test "X$HDF_FORTRAN" = "Xyes"; then HDF_FORTRAN=yes @@ -5369,12 +5204,6 @@ if test "X$HDF_FORTRAN" = "Xyes"; then HDF5_INTERFACES="$HDF5_INTERFACES fortran" ## -------------------------------------------------------------------- - ## Default for FORTRAN 2003 compliant compilers - ## - HAVE_FORTRAN_2003="no" - HAVE_F2003_REQUIREMENTS="no" - - ## -------------------------------------------------------------------- ## HDF5 integer variables for the H5fortran_types.f90 file. ## @@ -5660,14 +5489,14 @@ ac_compiler_gnu=$ac_cv_c_compiler_gnu ## -------------------------------------------------------------------- - ## Check for a Fortran 9X compiler and how to include modules. + ## Check for a Fortran compiler and how to include modules. ## ac_ext=${ac_fc_srcext-f} ac_compile='$FC -c $FCFLAGS $ac_fcflags_srcext conftest.$ac_ext >&5' ac_link='$FC -o conftest$ac_exeext $FCFLAGS $LDFLAGS $ac_fcflags_srcext conftest.$ac_ext $LIBS >&5' ac_compiler_gnu=$ac_cv_fc_compiler_gnu if test -n "$ac_tool_prefix"; then - for ac_prog in f90 pgf90 slf90 f95 g95 xlf95 efc ifort ftn + for ac_prog in gfortran ifort pgf90 pathf90 pathf95 xlf90 xlf95 xlf2003 f90 epcf90 f95 fort lf95 g95 ifc efc gfc do # Extract the first word of "$ac_tool_prefix$ac_prog", so it can be a program name with args. set dummy $ac_tool_prefix$ac_prog; ac_word=$2 @@ -5711,7 +5540,7 @@ fi fi if test -z "$FC"; then ac_ct_FC=$FC - for ac_prog in f90 pgf90 slf90 f95 g95 xlf95 efc ifort ftn + for ac_prog in gfortran ifort pgf90 pathf90 pathf95 xlf90 xlf95 xlf2003 f90 epcf90 f95 fort lf95 g95 ifc efc gfc do # Extract the first word of "$ac_prog", so it can be a program name with args. set dummy $ac_prog; ac_word=$2 @@ -5965,11 +5794,6 @@ ac_compiler_gnu=$ac_cv_c_compiler_gnu - ## It seems that libtool (as of Libtool 1.5.14) is trying to - ## configure itself for Fortran 77. - ## Tell it that our F77 compiler is $FC (actually a F9X compiler) - F77=$FC - ## Change to the Fortran 90 language ac_ext=${ac_fc_srcext-f} ac_compile='$FC -c $FCFLAGS $ac_fcflags_srcext conftest.$ac_ext >&5' @@ -6663,21 +6487,11 @@ ac_compiler_gnu=$ac_cv_fc_compiler_gnu ## -------------------------------------------------------------------- - ## See if the compiler will support the "-I." option - ## - - - ## -------------------------------------------------------------------- ## See if the fortran compiler supports the intrinsic function "SIZEOF" + HAVE_SIZEOF_FORTRAN="no" { $as_echo "$as_me:${as_lineno-$LINENO}: checking if Fortran compiler supports intrinsic SIZEOF" >&5 $as_echo_n "checking if Fortran compiler supports intrinsic SIZEOF... " >&6; } - if test "$cross_compiling" = yes; then : - { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5 -$as_echo "$as_me: error: in \`$ac_pwd':" >&2;} -as_fn_error $? "cannot run test program while cross compiling -See \`config.log' for more details" "$LINENO" 5; } -else cat > conftest.$ac_ext <<_ACEOF PROGRAM main @@ -6685,29 +6499,23 @@ else END PROGRAM _ACEOF -if ac_fn_fc_try_run "$LINENO"; then : +if ac_fn_fc_try_link "$LINENO"; then : { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5 $as_echo "yes" >&6; } - HAVE_SIZEOF="yes" + HAVE_SIZEOF_FORTRAN="yes" else { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5 $as_echo "no" >&6; } fi -rm -f core *.core core.conftest.* gmon.out bb.out conftest$ac_exeext \ - conftest.$ac_objext conftest.beam conftest.$ac_ext -fi +rm -f core conftest.err conftest.$ac_objext \ + conftest$ac_exeext conftest.$ac_ext ## See if the fortran compiler supports the intrinsic function "C_SIZEOF" + HAVE_C_SIZEOF_FORTRAN="no" { $as_echo "$as_me:${as_lineno-$LINENO}: checking if Fortran compiler supports intrinsic C_SIZEOF" >&5 $as_echo_n "checking if Fortran compiler supports intrinsic C_SIZEOF... " >&6; } - if test "$cross_compiling" = yes; then : - { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5 -$as_echo "$as_me: error: in \`$ac_pwd':" >&2;} -as_fn_error $? "cannot run test program while cross compiling -See \`config.log' for more details" "$LINENO" 5; } -else cat > conftest.$ac_ext <<_ACEOF PROGRAM main @@ -6718,29 +6526,23 @@ else END PROGRAM _ACEOF -if ac_fn_fc_try_run "$LINENO"; then : +if ac_fn_fc_try_link "$LINENO"; then : { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5 $as_echo "yes" >&6; } - HAVE_C_SIZEOF="yes" + HAVE_C_SIZEOF_FORTRAN="yes" else { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5 $as_echo "no" >&6; } fi -rm -f core *.core core.conftest.* gmon.out bb.out conftest$ac_exeext \ - conftest.$ac_objext conftest.beam conftest.$ac_ext -fi +rm -f core conftest.err conftest.$ac_objext \ + conftest$ac_exeext conftest.$ac_ext ## See if the fortran compiler supports the intrinsic function "STORAGE_SIZE" + HAVE_STORAGE_SIZE_FORTRAN="no" { $as_echo "$as_me:${as_lineno-$LINENO}: checking if Fortran compiler supports intrinsic STORAGE_SIZE" >&5 $as_echo_n "checking if Fortran compiler supports intrinsic STORAGE_SIZE... " >&6; } - if test "$cross_compiling" = yes; then : - { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5 -$as_echo "$as_me: error: in \`$ac_pwd':" >&2;} -as_fn_error $? "cannot run test program while cross compiling -See \`config.log' for more details" "$LINENO" 5; } -else cat > conftest.$ac_ext <<_ACEOF PROGRAM main @@ -6750,31 +6552,26 @@ else END PROGRAM _ACEOF -if ac_fn_fc_try_run "$LINENO"; then : +if ac_fn_fc_try_link "$LINENO"; then : { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5 $as_echo "yes" >&6; } - HAVE_STORAGE_SIZE="yes" + HAVE_STORAGE_SIZE_FORTRAN="yes" else { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5 $as_echo "no" >&6; } fi -rm -f core *.core core.conftest.* gmon.out bb.out conftest$ac_exeext \ - conftest.$ac_objext conftest.beam conftest.$ac_ext -fi +rm -f core conftest.err conftest.$ac_objext \ + conftest$ac_exeext conftest.$ac_ext + ## Check to see if -r8 was specified to determine if we need to ## compile the DOUBLE PRECISION interfaces. + FORTRAN_DEFAULT_REALisDBLE="no" { $as_echo "$as_me:${as_lineno-$LINENO}: checking if Fortran default REAL is DOUBLE PRECISION" >&5 $as_echo_n "checking if Fortran default REAL is DOUBLE PRECISION... " >&6; } - if test "$cross_compiling" = yes; then : - { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5 -$as_echo "$as_me: error: in \`$ac_pwd':" >&2;} -as_fn_error $? "cannot run test program while cross compiling -See \`config.log' for more details" "$LINENO" 5; } -else cat > conftest.$ac_ext <<_ACEOF MODULE type_mod @@ -6799,17 +6596,15 @@ else END PROGRAM main _ACEOF -if ac_fn_fc_try_run "$LINENO"; then : +if ac_fn_fc_try_compile "$LINENO"; then : { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5 $as_echo "no" >&6; } else { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5 $as_echo "yes" >&6; } - FORTRAN_DEFAULT_REALisDBLE="yes" -fi -rm -f core *.core core.conftest.* gmon.out bb.out conftest$ac_exeext \ - conftest.$ac_objext conftest.beam conftest.$ac_ext + FORTRAN_DEFAULT_REALisDBLE="yes" fi +rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext if test "X$HDF_FORTRAN2003" = "Xyes"; then @@ -6817,26 +6612,26 @@ fi ## Checking if the compiler supports the required Fortran 2003 features and ## disable Fortran 2003 if it does not. - { $as_echo "$as_me:${as_lineno-$LINENO}: checking if Fortran compiler version compatible with Fortran 2003 HDF" >&5 + { $as_echo "$as_me:${as_lineno-$LINENO}: checking if Fortran compiler version compatible with Fortran 2003 HDF" >&5 $as_echo_n "checking if Fortran compiler version compatible with Fortran 2003 HDF... " >&6; } HAVE_FORTRAN_2003="no" - + HAVE_F2003_REQUIREMENTS="no" cat > conftest.$ac_ext <<_ACEOF program main - USE iso_c_binding - IMPLICIT NONE - TYPE(C_PTR) :: ptr - TYPE(C_FUNPTR) :: funptr - CHARACTER(LEN=80, KIND=c_char), TARGET :: ichr + USE iso_c_binding + IMPLICIT NONE + TYPE(C_PTR) :: ptr + TYPE(C_FUNPTR) :: funptr + CHARACTER(LEN=80, KIND=c_char), TARGET :: ichr - ptr = C_LOC(ichr(1:1)) + ptr = C_LOC(ichr(1:1)) end _ACEOF -if ac_fn_fc_try_compile "$LINENO"; then : +if ac_fn_fc_try_link "$LINENO"; then : { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5 $as_echo "yes" >&6; } HAVE_F2003_REQUIREMENTS=yes @@ -6844,12 +6639,13 @@ else { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5 $as_echo "no" >&6; } fi -rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext +rm -f core conftest.err conftest.$ac_objext \ + conftest$ac_exeext conftest.$ac_ext + + if test "X$HAVE_F2003_REQUIREMENTS" = "Xno"; then - ## echo $HAVE_FORTRAN_2003 as_fn_error $? "Fortran compiler lacks required Fortran 2003 features; unsupported Fortran 2003 compiler, remove --enable-fortran2003" "$LINENO" 5 else - ## echo $HAVE_FORTRAN_2003 HAVE_FORTRAN_2003="yes" fi fi @@ -6865,7 +6661,7 @@ ac_link='$CC -o conftest$ac_exeext $CFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $ ac_compiler_gnu=$ac_cv_c_compiler_gnu - if test "X$HAVE_SIZEOF" = "Xyes"; then + if test "X$HAVE_SIZEOF_FORTRAN" = "Xyes"; then FORTRAN_HAVE_SIZEOF_TRUE= FORTRAN_HAVE_SIZEOF_FALSE='#' else @@ -6873,7 +6669,7 @@ else FORTRAN_HAVE_SIZEOF_FALSE= fi - if test "X$HAVE_C_SIZEOF" = "Xyes"; then + if test "X$HAVE_C_SIZEOF_FORTRAN" = "Xyes"; then FORTRAN_HAVE_C_SIZEOF_TRUE= FORTRAN_HAVE_C_SIZEOF_FALSE='#' else @@ -6881,7 +6677,7 @@ else FORTRAN_HAVE_C_SIZEOF_FALSE= fi - if test "X$HAVE_STORAGE_SIZE" = "Xyes"; then + if test "X$HAVE_STORAGE_SIZE_FORTRAN" = "Xyes"; then FORTRAN_HAVE_STORAGE_SIZE_TRUE= FORTRAN_HAVE_STORAGE_SIZE_FALSE='#' else @@ -6906,8 +6702,6 @@ else fi - - ## ---------------------------------------------------------------------- ## Check if they would like the C++ interface compiled ## @@ -7486,15 +7280,11 @@ ac_link='$CXX -o conftest$ac_exeext $CXXFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ex ac_compiler_gnu=$ac_cv_cxx_compiler_gnu + # Checking if C++ needs old style header files in includes + + { $as_echo "$as_me:${as_lineno-$LINENO}: checking if $CXX needs old style header files in includes" >&5 $as_echo_n "checking if $CXX needs old style header files in includes... " >&6; } - -if test "$cross_compiling" = yes; then : - { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5 -$as_echo "$as_me: error: in \`$ac_pwd':" >&2;} -as_fn_error $? "cannot run test program while cross compiling -See \`config.log' for more details" "$LINENO" 5; } -else cat confdefs.h - <<_ACEOF >conftest.$ac_ext /* end confdefs.h. */ @@ -7503,30 +7293,23 @@ else int main(void) { return 0; } _ACEOF -if ac_fn_cxx_try_run "$LINENO"; then : - - echo no - +if ac_fn_cxx_try_link "$LINENO"; then : + { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5 +$as_echo "no" >&6; } else - - echo yes + { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5 +$as_echo "yes" >&6; } CXXFLAGS="${CXXFLAGS} -DOLD_HEADER_FILENAME" AM_CXXFLAGS="${AM_CXXFLAGS} -DOLD_HEADER_FILENAME" - -fi -rm -f core *.core core.conftest.* gmon.out bb.out conftest$ac_exeext \ - conftest.$ac_objext conftest.beam conftest.$ac_ext fi +rm -f core conftest.err conftest.$ac_objext \ + conftest$ac_exeext conftest.$ac_ext + + # Checking if C++ can handle namespaces { $as_echo "$as_me:${as_lineno-$LINENO}: checking if $CXX can handle namespaces" >&5 $as_echo_n "checking if $CXX can handle namespaces... " >&6; } - if test "$cross_compiling" = yes; then : - { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5 -$as_echo "$as_me: error: in \`$ac_pwd':" >&2;} -as_fn_error $? "cannot run test program while cross compiling -See \`config.log' for more details" "$LINENO" 5; } -else cat confdefs.h - <<_ACEOF >conftest.$ac_ext /* end confdefs.h. */ @@ -7541,91 +7324,20 @@ int main(void) { } _ACEOF -if ac_fn_cxx_try_run "$LINENO"; then : - - echo yes - +if ac_fn_cxx_try_link "$LINENO"; then : + { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5 +$as_echo "yes" >&6; } else - - echo no + { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5 +$as_echo "no" >&6; } CXXFLAGS="${CXXFLAGS} -DH5_NO_NAMESPACE" AM_CXXFLAGS="${AM_CXXFLAGS} -DH5_NO_NAMESPACE" - fi -rm -f core *.core core.conftest.* gmon.out bb.out conftest$ac_exeext \ - conftest.$ac_objext conftest.beam conftest.$ac_ext -fi - - - { $as_echo "$as_me:${as_lineno-$LINENO}: checking if $CXX supports std" >&5 -$as_echo_n "checking if $CXX supports std... " >&6; } - if test "$cross_compiling" = yes; then : - { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5 -$as_echo "$as_me: error: in \`$ac_pwd':" >&2;} -as_fn_error $? "cannot run test program while cross compiling -See \`config.log' for more details" "$LINENO" 5; } -else - cat confdefs.h - <<_ACEOF >conftest.$ac_ext -/* end confdefs.h. */ - -#include <string> - -using namespace std; - -int main(void) { - string myString("testing namespace std"); - return 0; -} - -_ACEOF -if ac_fn_cxx_try_run "$LINENO"; then : - - echo yes - -else - - echo no - CXXFLAGS="${CXXFLAGS} -DH5_NO_STD" - AM_CXXFLAGS="${AM_CXXFLAGS} -DH5_NO_STD" - -fi -rm -f core *.core core.conftest.* gmon.out bb.out conftest$ac_exeext \ - conftest.$ac_objext conftest.beam conftest.$ac_ext -fi - - - { $as_echo "$as_me:${as_lineno-$LINENO}: checking if $CXX supports bool types" >&5 -$as_echo_n "checking if $CXX supports bool types... " >&6; } - if test "$cross_compiling" = yes; then : - { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5 -$as_echo "$as_me: error: in \`$ac_pwd':" >&2;} -as_fn_error $? "cannot run test program while cross compiling -See \`config.log' for more details" "$LINENO" 5; } -else - cat confdefs.h - <<_ACEOF >conftest.$ac_ext -/* end confdefs.h. */ - -int main(void) { - bool flag; - return 0; -} - -_ACEOF -if ac_fn_cxx_try_run "$LINENO"; then : - - echo yes - -else - - echo no - CXXFLAGS="${CXXFLAGS} -DBOOL_NOTDEFINED" - AM_CXXFLAGS="${AM_CXXFLAGS} -DBOOL_NOTDEFINED" +rm -f core conftest.err conftest.$ac_objext \ + conftest$ac_exeext conftest.$ac_ext -fi -rm -f core *.core core.conftest.* gmon.out bb.out conftest$ac_exeext \ - conftest.$ac_objext conftest.beam conftest.$ac_ext -fi + # Checking if C++ has offsetof extension { $as_echo "$as_me:${as_lineno-$LINENO}: checking if $CXX has offsetof extension" >&5 $as_echo_n "checking if $CXX has offsetof extension... " >&6; } @@ -7662,26 +7374,24 @@ main () return 0; } _ACEOF -if ac_fn_cxx_try_compile "$LINENO"; then : +if ac_fn_cxx_try_link "$LINENO"; then : + { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5 +$as_echo "yes" >&6; } $as_echo "#define CXX_HAVE_OFFSETOF 1" >>confdefs.h - { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5 -$as_echo "yes" >&6; } else { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5 $as_echo "no" >&6; } fi -rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext +rm -f core conftest.err conftest.$ac_objext \ + conftest$ac_exeext conftest.$ac_ext + + + # if C++ can handle static cast { $as_echo "$as_me:${as_lineno-$LINENO}: checking if $CXX can handle static cast" >&5 $as_echo_n "checking if $CXX can handle static cast... " >&6; } - if test "$cross_compiling" = yes; then : - { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5 -$as_echo "$as_me: error: in \`$ac_pwd':" >&2;} -as_fn_error $? "cannot run test program while cross compiling -See \`config.log' for more details" "$LINENO" 5; } -else cat confdefs.h - <<_ACEOF >conftest.$ac_ext /* end confdefs.h. */ @@ -7694,23 +7404,22 @@ int main(void) { } _ACEOF -if ac_fn_cxx_try_run "$LINENO"; then : - - echo yes - +if ac_fn_cxx_try_link "$LINENO"; then : + { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5 +$as_echo "yes" >&6; } else - - echo no + { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5 +$as_echo "no" >&6; } CXXFLAGS="${CXXFLAGS} -DNO_STATIC_CAST" AM_CXXFLAGS="${AM_CXXFLAGS} -DNO_STATIC_CAST" - -fi -rm -f core *.core core.conftest.* gmon.out bb.out conftest$ac_exeext \ - conftest.$ac_objext conftest.beam conftest.$ac_ext fi +rm -f core conftest.err conftest.$ac_objext \ + conftest$ac_exeext conftest.$ac_ext + else - echo "no" + { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5 +$as_echo "no" >&6; } CXX="no" fi @@ -7722,6 +7431,41 @@ ac_link='$CC -o conftest$ac_exeext $CFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $ ac_compiler_gnu=$ac_cv_c_compiler_gnu + +## ---------------------------------------------------------------------- +## Check if they would like the High Level library compiled +## + + HL="" +## name of fortran folder inside "hl", if FORTRAN compile is requested + HL_FOR="" +{ $as_echo "$as_me:${as_lineno-$LINENO}: checking if high level library is enabled" >&5 +$as_echo_n "checking if high level library is enabled... " >&6; } +# Check whether --enable-hl was given. +if test "${enable_hl+set}" = set; then : + enableval=$enable_hl; HDF5_HL=$enableval +else + HDF5_HL=yes +fi + + +if test "X$HDF5_HL" = "Xyes"; then + echo "yes" + HL="hl" + +$as_echo "#define INCLUDE_HL 1" >>confdefs.h + + + ## If Fortran's default real is double precision and HL is being built then configure + ## should fail due to bug HDFFV-889. + if test "X$FORTRAN_DEFAULT_REALisDBLE" = "Xyes"; then + as_fn_error $? "Fortran high-level routines are not supported when the default REAL is DOUBLE PRECISION, use configure option --disable-hl." "$LINENO" 5 + fi +else + echo "no" +fi + + ## ---------------------------------------------------------------------- ## Check if they have Perl installed on their system. We only need Perl ## if they're using a GNU compiler. @@ -7772,7 +7516,6 @@ done fi - ## ---------------------------------------------------------------------- ## Check which archiving tool to use. This needs to be done before ## the AM_PROG_LIBTOOL macro. @@ -7864,8 +7607,7 @@ fi ## ---------------------------------------------------------------------- -## Check that the tr utility is working properly. - +## Set up ${TR} which is used to process DEBUG_PKG. # Extract the first word of "tr", so it can be a program name with args. set dummy tr; ac_word=$2 { $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5 @@ -7907,16 +7649,16 @@ fi -TR_TEST=`echo Test | ${TR} ${as_cr_letters}"," ${as_cr_LETTERS}" "` -if test "X${TR_TEST}" != "XTEST"; then - as_fn_error $? "tr program doesn't work" "$LINENO" 5 -fi - ## ---------------------------------------------------------------------- ## Check that time can be used with srcdir. This is okay on most systems, ## but seems to cause problems on Cygwin. ## The solution on Cygwin is not to record execution time for tests. +## +## Note: This is still true as of Cygwin 1.7.32 (Aug 2014) on both 32- +## and 64-bit platforms. Given how long this has been true, it seems +## unlikely to change, but we should probably re-test this periodically. + { $as_echo "$as_me:${as_lineno-$LINENO}: checking if srcdir= and time commands work together" >&5 $as_echo_n "checking if srcdir= and time commands work together... " >&6; } @@ -7941,16 +7683,14 @@ fi ## a parallel library even if configure wasn't ## able to find some header file or library that ## might be required. This is defined if the -## compiler looks like a parallel compiler (e.g., -## mpicc or mpcc) or if the user explicitly states +## user explicitly states ## that a parallel library is being built by supplying ## the `--enable-parallel' configure switch. ## ## PARALLEL -- This variable is set to a non-null value if -## configure thinks we're compiling a parallel -## version of the library. +## we're building a parallel version of the library. ## -## RUNSERIAL -- This is a command which will be prepended to +## RUNSERIAL -- This is a command which will be prepended to ## the executable name to run the executable using ## a single process. For serial versions of the ## library this will normally be empty. For parallel @@ -7976,146 +7716,6 @@ fi ## ---------------------------------------------------------------------- -## If the compiler is obviously a parallel compiler then we're building -## a parallel version of hdf5 and should define HAVE_PARALLEL. Furthermore, -## the name of the compiler might tell us how to run the resulting -## executable. For `mpicc' the executable should be run with `mpiexec' from -## the same directory as mpicc if it exists. -## -case "$CC_BASENAME" in - mpicc) - ## The mpich compiler. Use mpiexec from the same directory if it - ## exists. - PARALLEL=mpicc - { $as_echo "$as_me:${as_lineno-$LINENO}: checking for mpiexec" >&5 -$as_echo_n "checking for mpiexec... " >&6; } - - ## Find the path where mpicc is located. - cmd="`echo $CC | cut -f1 -d' '`" - if (echo $cmd | grep / >/dev/null); then - path="`echo $cmd | sed 's/\(.*\)\/.*$/\1/'`" - else - for path in `echo $PATH | ${TR} ":" " "`; do - if test -x $path/$cmd; then - break - fi - done - fi - - ## Is there an mpiexec at that path? - if test -x $path/mpiexec; then - { $as_echo "$as_me:${as_lineno-$LINENO}: result: $path/mpiexec" >&5 -$as_echo "$path/mpiexec" >&6; } - RUNSERIAL="${RUNSERIAL:-none}" - - if test -z "$RUNPARALLEL"; then - RUNPARALLEL="$path/mpiexec -n \$\${NPROCS:=6}" - fi - else - { $as_echo "$as_me:${as_lineno-$LINENO}: result: none" >&5 -$as_echo "none" >&6; } - fi - ;; - - mpcc|mpcc_r) - ## The IBM compiler - PARALLEL="$CC_BASENAME" - ;; - - *) - ## Probably not a parallel compiler, but if `--enable-parallel' - ## is defined below then we're still building a parallel hdf5. - ;; -esac - -## ---------------------------------------------------------------------- -## If the Fortran compiler is obviously a parallel compiler then we're -## building a parallel version of hdf5 and should define HAVE_PARALLEL. -## Furthermore, the name of the compiler might tell us how to run the -## resulting executable. For `mpif90' the executable should be run with -## `mpiexec' from the same directory as mpif90 if it exists. -## - -if test "X$HDF_FORTRAN" = "Xyes" ; then - ## Change to the Fortran 90 language - ac_ext=${ac_fc_srcext-f} -ac_compile='$FC -c $FCFLAGS $ac_fcflags_srcext conftest.$ac_ext >&5' -ac_link='$FC -o conftest$ac_exeext $FCFLAGS $LDFLAGS $ac_fcflags_srcext conftest.$ac_ext $LIBS >&5' -ac_compiler_gnu=$ac_cv_fc_compiler_gnu - - - case "$FC" in - *mpif90*) - ## The Fortran mpich compiler. Use mpiexec from the same directory - ## if it exists. - PARALLEL=mpif90 - { $as_echo "$as_me:${as_lineno-$LINENO}: checking for mpiexec" >&5 -$as_echo_n "checking for mpiexec... " >&6; } - - ## Find the path where mpif90 is located. - cmd=`echo $FC |cut -f1 -d' '` - if (echo $cmd |grep / >/dev/null); then - path="`echo $cmd |sed 's/\(.*\)\/.*$/\1/'`" - else - for path in `echo $PATH | ${TR} ":" " "`; do - if test -x $path/$cmd; then - break; - fi - done - fi - - ## Is there an mpiexec at that path? - if test -x $path/mpiexec; then - { $as_echo "$as_me:${as_lineno-$LINENO}: result: $path/mpiexec" >&5 -$as_echo "$path/mpiexec" >&6; } - RUNSERIAL="${RUNSERIAL:-none}" - - if test -z "$RUNPARALLEL"; then - RUNPARALLEL="$path/mpiexec -n \$\${NPROCS:=6}" - fi - else - { $as_echo "$as_me:${as_lineno-$LINENO}: result: none" >&5 -$as_echo "none" >&6; } - fi - ;; - - *mpxlf* | *mpxlf_r* | *mpxlf90* | *mpxlf90_r* | *mpxlf95* | *mpxlf95_r*) - ## The IBM compiler - PARALLEL="$FC" - ;; - - *) - ## Probably not a parallel compiler, but if `--enable-parallel' - ## is defined below then we're still building a parallel hdf5. - ;; - esac - - ## Change to the C language - ac_ext=c -ac_cpp='$CPP $CPPFLAGS' -ac_compile='$CC -c $CFLAGS $CPPFLAGS conftest.$ac_ext >&5' -ac_link='$CC -o conftest$ac_exeext $CFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5' -ac_compiler_gnu=$ac_cv_c_compiler_gnu - -fi - -## ----------------------------------------------------------------------------- -## If shared libraries are being used with parallel, disable them, unless the -## user explicity enables them via the '--enable-shared' option. - -if test "X${enable_shared}" = "X" -a "X${enable_parallel}" = "Xyes"; then - echo ' shared libraries disabled in parallel' - enable_shared="no" -elif test "X${enable_shared}" = "Xyes" -a "X${enable_parallel}" = "Xyes"; then - echo ' shared libraries explicitly enabled by user' -elif test "X${enable_shared}" = "X" -a "X${PARALLEL}" != "X"; then - echo ' shared libraries disabled when a parallel compiler is being used' - enable_shared="no" -elif test "X${enable_shared}" = "Xyes" -a "X${PARALLEL}" != "X"; then - echo ' shared libraries explicitly enabled by user' -fi - -## ---------------------------------------------------------------------- ## Fortran libraries are not currently supported on Mac. Disable them. ## (this is overridable with --enable-unsupported). ## @@ -22865,113 +22465,6 @@ $as_echo "#define TIME_WITH_SYS_TIME 1" >>confdefs.h fi -## ---------------------------------------------------------------------- -## Check for these two functions before the time headers are checked -## for, otherwise they are not detected correctly on Solaris (the -## configure test will fail due to multiply-defined symbols). -## -for ac_func in difftime -do : - ac_fn_c_check_func "$LINENO" "difftime" "ac_cv_func_difftime" -if test "x$ac_cv_func_difftime" = xyes; then : - cat >>confdefs.h <<_ACEOF -#define HAVE_DIFFTIME 1 -_ACEOF - -fi -done - -for ac_func in gettimeofday -do : - ac_fn_c_check_func "$LINENO" "gettimeofday" "ac_cv_func_gettimeofday" -if test "x$ac_cv_func_gettimeofday" = xyes; then : - cat >>confdefs.h <<_ACEOF -#define HAVE_GETTIMEOFDAY 1 -_ACEOF - have_gettime="yes" -else - have_gettime="no" -fi -done - -{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for library containing clock_gettime" >&5 -$as_echo_n "checking for library containing clock_gettime... " >&6; } -if ${ac_cv_search_clock_gettime+:} false; then : - $as_echo_n "(cached) " >&6 -else - ac_func_search_save_LIBS=$LIBS -cat confdefs.h - <<_ACEOF >conftest.$ac_ext -/* end confdefs.h. */ - -/* Override any GCC internal prototype to avoid an error. - Use char because int might match the return type of a GCC - builtin and then its argument prototype would still apply. */ -#ifdef __cplusplus -extern "C" -#endif -char clock_gettime (); -#ifdef FC_DUMMY_MAIN -#ifndef FC_DUMMY_MAIN_EQ_F77 -# ifdef __cplusplus - extern "C" -# endif - int FC_DUMMY_MAIN() { return 1; } -#endif -#endif -int -main () -{ -return clock_gettime (); - ; - return 0; -} -_ACEOF -for ac_lib in '' rt posix4; do - if test -z "$ac_lib"; then - ac_res="none required" - else - ac_res=-l$ac_lib - LIBS="-l$ac_lib $ac_func_search_save_LIBS" - fi - if ac_fn_c_try_link "$LINENO"; then : - ac_cv_search_clock_gettime=$ac_res -fi -rm -f core conftest.err conftest.$ac_objext \ - conftest$ac_exeext - if ${ac_cv_search_clock_gettime+:} false; then : - break -fi -done -if ${ac_cv_search_clock_gettime+:} false; then : - -else - ac_cv_search_clock_gettime=no -fi -rm conftest.$ac_ext -LIBS=$ac_func_search_save_LIBS -fi -{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_search_clock_gettime" >&5 -$as_echo "$ac_cv_search_clock_gettime" >&6; } -ac_res=$ac_cv_search_clock_gettime -if test "$ac_res" != no; then : - test "$ac_res" = "none required" || LIBS="$ac_res $LIBS" - -fi - -for ac_func in clock_gettime -do : - ac_fn_c_check_func "$LINENO" "clock_gettime" "ac_cv_func_clock_gettime" -if test "x$ac_cv_func_clock_gettime" = xyes; then : - cat >>confdefs.h <<_ACEOF -#define HAVE_CLOCK_GETTIME 1 -_ACEOF - have_clock_gettime="yes" -else - have_clock_gettime="no" -fi -done - - ## Unix for ac_header in sys/resource.h sys/time.h unistd.h sys/ioctl.h sys/stat.h do : @@ -23232,92 +22725,15 @@ $as_echo "no" >&6; } fi ## ---------------------------------------------------------------------- -## Test for Largefile support. -## -{ $as_echo "$as_me:${as_lineno-$LINENO}: checking if configure should try to set up large file support" >&5 -$as_echo_n "checking if configure should try to set up large file support... " >&6; } - -# Check whether --enable-largefile was given. -if test "${enable_largefile+set}" = set; then : - enableval=$enable_largefile; -fi - - -## If largefile support is enabled, then set up appropriate compiler options. -if test "$enable_largefile" != no; then - { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5 -$as_echo "yes" >&6; } - - ## Check for needed compiler options. This check is pulled drectly - ## from autoconf's AC_SYS_LARGEFILE macro, as of Autoconf v2.65. - { $as_echo "$as_me:${as_lineno-$LINENO}: checking for special C compiler options needed for large files" >&5 -$as_echo_n "checking for special C compiler options needed for large files... " >&6; } -if ${ac_cv_sys_largefile_CC+:} false; then : - $as_echo_n "(cached) " >&6 -else - ac_cv_sys_largefile_CC=no - if test "$GCC" != yes; then - ac_save_CC=$CC - while :; do - ## IRIX 6.2 and later do not support large files by default, - ## so use the C compiler's -n32 option if that helps. - cat confdefs.h - <<_ACEOF >conftest.$ac_ext -/* end confdefs.h. */ -#include <sys/types.h> - /* Check that off_t can represent 2**63 - 1 correctly. - We can't simply define LARGE_OFF_T to be 9223372036854775807, - since some C++ compilers masquerading as C compilers - incorrectly reject 9223372036854775807. */ -#define LARGE_OFF_T (((off_t) 1 << 62) - 1 + ((off_t) 1 << 62)) - int off_t_is_large[(LARGE_OFF_T % 2147483629 == 721 - && LARGE_OFF_T % 2147483647 == 1) - ? 1 : -1]; -#ifdef FC_DUMMY_MAIN -#ifndef FC_DUMMY_MAIN_EQ_F77 -# ifdef __cplusplus - extern "C" -# endif - int FC_DUMMY_MAIN() { return 1; } -#endif -#endif -int -main () -{ - - ; - return 0; -} -_ACEOF - if ac_fn_c_try_compile "$LINENO"; then : - break -fi -rm -f core conftest.err conftest.$ac_objext - CC="$CC -n32" - if ac_fn_c_try_compile "$LINENO"; then : - ac_cv_sys_largefile_CC=' -n32'; break -fi -rm -f core conftest.err conftest.$ac_objext - break - done - CC=$ac_save_CC - rm -f conftest.$ac_ext - fi -fi -{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_sys_largefile_CC" >&5 -$as_echo "$ac_cv_sys_largefile_CC" >&6; } - if test "$ac_cv_sys_largefile_CC" != no; then - CC=$CC$ac_cv_sys_largefile_CC - fi - - ## Use the macro _AC_SYS_LARGEFILE_MACRO_VALUE to test defines - ## that might need to be set for largefile support to behave - ## correctly. This macro is defined in acsite.m4 and overrides - ## the version provided by Autoconf (as of v2.65). The custom - ## macro additionally adds the appropriate defines to AM_CPPFLAGS - ## so that later configure checks have them visible. - - ## Check for _FILE_OFFSET_BITS - { $as_echo "$as_me:${as_lineno-$LINENO}: checking for _FILE_OFFSET_BITS value needed for large files" >&5 +## Use the macro _AC_SYS_LARGEFILE_MACRO_VALUE to test defines +## that might need to be set for largefile support to behave +## correctly. This macro is defined in acsite.m4 and overrides +## the version provided by Autoconf (as of v2.65). The custom +## macro additionally adds the appropriate defines to AM_CPPFLAGS +## so that later configure checks have them visible. + +## Check for _FILE_OFFSET_BITS +{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for _FILE_OFFSET_BITS value needed for large files" >&5 $as_echo_n "checking for _FILE_OFFSET_BITS value needed for large files... " >&6; } if ${ac_cv_sys_file_offset_bits+:} false; then : $as_echo_n "(cached) " >&6 @@ -23403,9 +22819,9 @@ _ACEOF esac rm -rf conftest* - ## Check for _LARGE_FILES - if test "$ac_cv_sys_file_offset_bits" = unknown; then - { $as_echo "$as_me:${as_lineno-$LINENO}: checking for _LARGE_FILES value needed for large files" >&5 +## Check for _LARGE_FILES +if test "$ac_cv_sys_file_offset_bits" = unknown; then + { $as_echo "$as_me:${as_lineno-$LINENO}: checking for _LARGE_FILES value needed for large files" >&5 $as_echo_n "checking for _LARGE_FILES value needed for large files... " >&6; } if ${ac_cv_sys_large_files+:} false; then : $as_echo_n "(cached) " >&6 @@ -23490,68 +22906,6 @@ _ACEOF AM_CPPFLAGS="-D_LARGE_FILES=$ac_cv_sys_large_files $AM_CPPFLAGS";; esac rm -rf conftest* - fi - - ## Now actually test to see if we can create large files after we've - ## checked for any needed defines. - { $as_echo "$as_me:${as_lineno-$LINENO}: checking if large (64-bit) files are supported on this system." >&5 -$as_echo_n "checking if large (64-bit) files are supported on this system.... " >&6; } - if ${hdf5_cv_have_lfs+:} false; then : - $as_echo_n "(cached) " >&6 -else - if test "$cross_compiling" = yes; then : - { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5 -$as_echo "$as_me: error: in \`$ac_pwd':" >&2;} -as_fn_error $? "cannot run test program while cross compiling -See \`config.log' for more details" "$LINENO" 5; } -else - cat confdefs.h - <<_ACEOF >conftest.$ac_ext -/* end confdefs.h. */ - - #include <stdio.h> - #include <unistd.h> - #include <stdlib.h> - #include <fcntl.h> - #define BIG_FILE (off_t)0x80000000UL - int main(void) { - int fd; - if ((fd=open("test.conf", O_RDWR|O_TRUNC|O_CREAT, 0666)) < 0) exit(1); - if (lseek(fd, BIG_FILE, SEEK_SET)!=BIG_FILE) exit(1); - if (5!=write(fd, "hello", (size_t)5)) exit(1); - if (lseek(fd, 2*BIG_FILE, SEEK_SET) != 2*BIG_FILE) exit(1); - if (5!=write(fd, "hello", (size_t)5)) exit(1); - if (unlink("test.conf") < 0) exit(1); - exit(0); - } - -_ACEOF -if ac_fn_c_try_run "$LINENO"; then : - hdf5_cv_have_lfs=yes -else - hdf5_cv_have_lfs=no -fi -rm -f core *.core core.conftest.* gmon.out bb.out conftest$ac_exeext \ - conftest.$ac_objext conftest.beam conftest.$ac_ext -fi - -fi - - - if test "X${hdf5_cv_have_lfs}" = "Xyes"; then - { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5 -$as_echo "yes" >&6; } - LARGEFILE="yes" - fi - if test "X${hdf5_cv_have_lfs}" = "Xno"; then - { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5 -$as_echo "no" >&6; } - LARGEFILE="no" - fi - -else - LARGEFILE="no" - { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5 -$as_echo "no" >&6; } fi ## ---------------------------------------------------------------------- @@ -23559,28 +22913,35 @@ fi ## case "$host_cpu-$host_vendor-$host_os" in *linux*) - ## If largefile support is enabled, then make available various - ## LFS-related routines using the following _LARGEFILE*_SOURCE macros. - if test "X$LARGEFILE" != "Xno"; then - AM_CPPFLAGS="-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE $AM_CPPFLAGS" - fi + ## Make available various LFS-related routines using the following + ## _LARGEFILE*_SOURCE macros. + AM_CPPFLAGS="-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE $AM_CPPFLAGS" ## Add POSIX support on Linux systems, so <features.h> defines ## __USE_POSIX, which is required to get the prototype for fdopen ## defined correctly in <stdio.h>. + ## ## This flag was removed from h5cc as of 2009-10-17 when it was found ## that the flag broke compiling netCDF-4 code with h5cc, but kept in ## H5_CPPFLAGS because fdopen and HDfdopen fail without it. HDfdopen ## is used only by H5_debug_mask which is used only when debugging in ## H5_init_library (all in H5.c). When the flag was removed this was ## the only compile failure noted. + ## ## This was originally defined as _POSIX_SOURCE which was updated to ## _POSIX_C_SOURCE=199506L to expose a greater amount of POSIX ## functionality so clock_gettime and CLOCK_MONOTONIC are defined - ## correctly. + ## correctly. This was later updated to 200112L so that + ## posix_memalign() is visible for the direct VFD code on Linux + ## systems. + ## ## POSIX feature information can be found in the gcc manual at: ## http://www.gnu.org/s/libc/manual/html_node/Feature-Test-Macros.html - H5_CPPFLAGS="-D_POSIX_C_SOURCE=199506L $H5_CPPFLAGS" + H5_CPPFLAGS="-D_POSIX_C_SOURCE=200112L $H5_CPPFLAGS" + + ## Need to add this so that O_DIRECT is visible for the direct + ## VFD on Linux systems. + AM_CPPFLAGS="-D_GNU_SOURCE $AM_CPPFLAGS" ## Also add BSD support on Linux systems, so <features.h> defines ## __USE_BSD, which is required to get the prototype for strdup @@ -26794,42 +26155,6 @@ $as_echo "no" >&6; } fi rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext -## check if `struct tm' has a `__tm_gmtoff' member. -{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for __tm_gmtoff in struct tm" >&5 -$as_echo_n "checking for __tm_gmtoff in struct tm... " >&6; } -cat confdefs.h - <<_ACEOF >conftest.$ac_ext -/* end confdefs.h. */ - - #include <sys/time.h> - #include <time.h> -#ifdef FC_DUMMY_MAIN -#ifndef FC_DUMMY_MAIN_EQ_F77 -# ifdef __cplusplus - extern "C" -# endif - int FC_DUMMY_MAIN() { return 1; } -#endif -#endif -int -main () -{ -struct tm tm; tm.__tm_gmtoff=0; - ; - return 0; -} -_ACEOF -if ac_fn_c_try_compile "$LINENO"; then : - -$as_echo "#define HAVE___TM_GMTOFF 1" >>confdefs.h - - { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5 -$as_echo "yes" >&6; } -else - { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5 -$as_echo "no" >&6; } -fi -rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext - ## Check whether the global variable `timezone' is defined. { $as_echo "$as_me:${as_lineno-$LINENO}: checking for global timezone variable" >&5 $as_echo_n "checking for global timezone variable... " >&6; } @@ -26876,217 +26201,6 @@ rm -f core conftest.err conftest.$ac_objext \ ;; esac -## Check whether `struct timezone' is defined. -{ $as_echo "$as_me:${as_lineno-$LINENO}: checking whether struct tm is in sys/time.h or time.h" >&5 -$as_echo_n "checking whether struct tm is in sys/time.h or time.h... " >&6; } -if ${ac_cv_struct_tm+:} false; then : - $as_echo_n "(cached) " >&6 -else - cat confdefs.h - <<_ACEOF >conftest.$ac_ext -/* end confdefs.h. */ -#include <sys/types.h> -#include <time.h> - -#ifdef FC_DUMMY_MAIN -#ifndef FC_DUMMY_MAIN_EQ_F77 -# ifdef __cplusplus - extern "C" -# endif - int FC_DUMMY_MAIN() { return 1; } -#endif -#endif -int -main () -{ -struct tm tm; - int *p = &tm.tm_sec; - return !p; - ; - return 0; -} -_ACEOF -if ac_fn_c_try_compile "$LINENO"; then : - ac_cv_struct_tm=time.h -else - ac_cv_struct_tm=sys/time.h -fi -rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext -fi -{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_struct_tm" >&5 -$as_echo "$ac_cv_struct_tm" >&6; } -if test $ac_cv_struct_tm = sys/time.h; then - -$as_echo "#define TM_IN_SYS_TIME 1" >>confdefs.h - -fi - -ac_fn_c_check_member "$LINENO" "struct tm" "tm_zone" "ac_cv_member_struct_tm_tm_zone" "#include <sys/types.h> -#include <$ac_cv_struct_tm> - -" -if test "x$ac_cv_member_struct_tm_tm_zone" = xyes; then : - -cat >>confdefs.h <<_ACEOF -#define HAVE_STRUCT_TM_TM_ZONE 1 -_ACEOF - - -fi - -if test "$ac_cv_member_struct_tm_tm_zone" = yes; then - -$as_echo "#define HAVE_TM_ZONE 1" >>confdefs.h - -else - ac_fn_c_check_decl "$LINENO" "tzname" "ac_cv_have_decl_tzname" "#include <time.h> -" -if test "x$ac_cv_have_decl_tzname" = xyes; then : - ac_have_decl=1 -else - ac_have_decl=0 -fi - -cat >>confdefs.h <<_ACEOF -#define HAVE_DECL_TZNAME $ac_have_decl -_ACEOF - - { $as_echo "$as_me:${as_lineno-$LINENO}: checking for tzname" >&5 -$as_echo_n "checking for tzname... " >&6; } -if ${ac_cv_var_tzname+:} false; then : - $as_echo_n "(cached) " >&6 -else - cat confdefs.h - <<_ACEOF >conftest.$ac_ext -/* end confdefs.h. */ -#include <time.h> -#if !HAVE_DECL_TZNAME -extern char *tzname[]; -#endif - -#ifdef FC_DUMMY_MAIN -#ifndef FC_DUMMY_MAIN_EQ_F77 -# ifdef __cplusplus - extern "C" -# endif - int FC_DUMMY_MAIN() { return 1; } -#endif -#endif -int -main () -{ -return tzname[0][0]; - ; - return 0; -} -_ACEOF -if ac_fn_c_try_link "$LINENO"; then : - ac_cv_var_tzname=yes -else - ac_cv_var_tzname=no -fi -rm -f core conftest.err conftest.$ac_objext \ - conftest$ac_exeext conftest.$ac_ext -fi -{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_var_tzname" >&5 -$as_echo "$ac_cv_var_tzname" >&6; } - if test $ac_cv_var_tzname = yes; then - -$as_echo "#define HAVE_TZNAME 1" >>confdefs.h - - fi -fi - -{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for struct timezone" >&5 -$as_echo_n "checking for struct timezone... " >&6; } -cat confdefs.h - <<_ACEOF >conftest.$ac_ext -/* end confdefs.h. */ - - #include <sys/types.h> - #include <sys/time.h> - #include <time.h> -#ifdef FC_DUMMY_MAIN -#ifndef FC_DUMMY_MAIN_EQ_F77 -# ifdef __cplusplus - extern "C" -# endif - int FC_DUMMY_MAIN() { return 1; } -#endif -#endif -int -main () -{ -struct timezone tz; tz.tz_minuteswest=0; - ; - return 0; -} -_ACEOF -if ac_fn_c_try_compile "$LINENO"; then : - -$as_echo "#define HAVE_STRUCT_TIMEZONE 1" >>confdefs.h - - have_struct_tz="yes" - { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5 -$as_echo "yes" >&6; } -else - { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5 -$as_echo "no" >&6; } -fi -rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext - -## If gettimeofday() is going to be used, make sure it uses the timezone struct - -if test "$have_gettime" = "yes" -a "$have_struct_tz" = "yes"; then - { $as_echo "$as_me:${as_lineno-$LINENO}: checking whether gettimeofday() gives timezone" >&5 -$as_echo_n "checking whether gettimeofday() gives timezone... " >&6; } - if ${hdf5_cv_gettimeofday_tz+:} false; then : - $as_echo_n "(cached) " >&6 -else - if test "$cross_compiling" = yes; then : - { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5 -$as_echo "$as_me: error: in \`$ac_pwd':" >&2;} -as_fn_error $? "cannot run test program while cross compiling -See \`config.log' for more details" "$LINENO" 5; } -else - cat confdefs.h - <<_ACEOF >conftest.$ac_ext -/* end confdefs.h. */ - - #include <time.h> - #include <sys/time.h> - int main(void) - { - struct timeval tv; - struct timezone tz; - tz.tz_minuteswest = 7777; /* Initialize to an unreasonable number */ - tz.tz_dsttime = 7; - gettimeofday(&tv, &tz); - /* Check whether the function returned any value at all */ - if(tz.tz_minuteswest == 7777 && tz.tz_dsttime == 7) - exit(1); - else exit (0); - } -_ACEOF -if ac_fn_c_try_run "$LINENO"; then : - hdf5_cv_gettimeofday_tz=yes -else - hdf5_cv_gettimeofday_tz=no -fi -rm -f core *.core core.conftest.* gmon.out bb.out conftest$ac_exeext \ - conftest.$ac_objext conftest.beam conftest.$ac_ext -fi - -fi - - - if test ${hdf5_cv_gettimeofday_tz} = "yes"; then - { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5 -$as_echo "yes" >&6; } - -$as_echo "#define GETTIMEOFDAY_GIVES_TZ 1" >>confdefs.h - - else - { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5 -$as_echo "no" >&6; } - fi -fi ## ---------------------------------------------------------------------- ## Does the struct stat have the st_blocks field? This field is not Posix. @@ -27306,7 +26420,73 @@ rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext ## ---------------------------------------------------------------------- ## Check for functions. ## -for ac_func in alarm BSDgettimeofday fork frexpf frexpl +## NOTE: clock_gettime may require linking to the rt or posix4 library +## so we'll search for it before calling AC_CHECK_FUNCS. +{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for library containing clock_gettime" >&5 +$as_echo_n "checking for library containing clock_gettime... " >&6; } +if ${ac_cv_search_clock_gettime+:} false; then : + $as_echo_n "(cached) " >&6 +else + ac_func_search_save_LIBS=$LIBS +cat confdefs.h - <<_ACEOF >conftest.$ac_ext +/* end confdefs.h. */ + +/* Override any GCC internal prototype to avoid an error. + Use char because int might match the return type of a GCC + builtin and then its argument prototype would still apply. */ +#ifdef __cplusplus +extern "C" +#endif +char clock_gettime (); +#ifdef FC_DUMMY_MAIN +#ifndef FC_DUMMY_MAIN_EQ_F77 +# ifdef __cplusplus + extern "C" +# endif + int FC_DUMMY_MAIN() { return 1; } +#endif +#endif +int +main () +{ +return clock_gettime (); + ; + return 0; +} +_ACEOF +for ac_lib in '' rt posix4; do + if test -z "$ac_lib"; then + ac_res="none required" + else + ac_res=-l$ac_lib + LIBS="-l$ac_lib $ac_func_search_save_LIBS" + fi + if ac_fn_c_try_link "$LINENO"; then : + ac_cv_search_clock_gettime=$ac_res +fi +rm -f core conftest.err conftest.$ac_objext \ + conftest$ac_exeext + if ${ac_cv_search_clock_gettime+:} false; then : + break +fi +done +if ${ac_cv_search_clock_gettime+:} false; then : + +else + ac_cv_search_clock_gettime=no +fi +rm conftest.$ac_ext +LIBS=$ac_func_search_save_LIBS +fi +{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_search_clock_gettime" >&5 +$as_echo "$ac_cv_search_clock_gettime" >&6; } +ac_res=$ac_cv_search_clock_gettime +if test "$ac_res" != no; then : + test "$ac_res" = "none required" || LIBS="$ac_res $LIBS" + +fi + +for ac_func in alarm clock_gettime difftime fork frexpf frexpl do : as_ac_var=`$as_echo "ac_cv_func_$ac_func" | $as_tr_sh` ac_fn_c_check_func "$LINENO" "$ac_func" "$as_ac_var" @@ -27318,7 +26498,7 @@ _ACEOF fi done -for ac_func in gethostname getpwuid getrusage lstat +for ac_func in gethostname getpwuid getrusage gettimeofday do : as_ac_var=`$as_echo "ac_cv_func_$ac_func" | $as_tr_sh` ac_fn_c_check_func "$LINENO" "$ac_func" "$as_ac_var" @@ -27330,7 +26510,7 @@ _ACEOF fi done -for ac_func in rand_r random setsysinfo +for ac_func in lstat rand_r random setsysinfo do : as_ac_var=`$as_echo "ac_cv_func_$ac_func" | $as_tr_sh` ac_fn_c_check_func "$LINENO" "$ac_func" "$as_ac_var" @@ -28210,10 +27390,7 @@ rm -f confcache ## What header files and libraries do we have to look for for parallel ## support? For the most part, search paths are already specified with -## CPPFLAGS and LDFLAGS or are known to the compiler. If the user says -## `--disable-parallel' but specifies a known parallel compiler (like mpicc -## or mpcc) then parallel support is enabled but configure doesn't search -## for any parallel header files or libraries. +## CPPFLAGS and LDFLAGS or are known to the compiler. ## # Check whether --enable-parallel was given. if test "${enable_parallel+set}" = set; then : @@ -28238,26 +27415,11 @@ if test "X${ALLOW_UNSUPPORTED}" != "Xyes"; then fi fi -## It's possible to build in parallel by specifying a parallel compiler -## without using the --enable-parallel flag. This isn't allowed with -## C++ or threadsafe, either, unless the --enable-unsupported flag -## has also been specified. -if test "X${ALLOW_UNSUPPORTED}" != "Xyes"; then - if test "X${PARALLEL}" != "X" -a "X${enable_cxx}" = "Xyes" ; then - as_fn_error $? "An MPI compiler is being used; --enable-cxx is not allowed. Use --enable-unsupported to override this error." "$LINENO" 5 - fi - if test "X${PARALLEL}" != "X" -a "X${THREADSAFE}" = "Xyes"; then - as_fn_error $? "An MPI compiler is being used; --enable-threadsafe is not allowed. Use --enable-unsupported to override this error." "$LINENO" 5 - fi -fi - { $as_echo "$as_me:${as_lineno-$LINENO}: checking for parallel support files" >&5 $as_echo_n "checking for parallel support files... " >&6; } case "X-$enable_parallel" in X-|X-no|X-none) - ## Either we are not compiling for parallel or the header and - ## library files and locations are known to the compiler (this is - ## the case for a correct installation of mpicc for instance). + ## We are not compiling for parallel. { $as_echo "$as_me:${as_lineno-$LINENO}: result: skipped" >&5 $as_echo "skipped" >&6; } ;; @@ -28269,185 +27431,12 @@ $as_echo "skipped" >&6; } $as_echo "provided by compiler" >&6; } PARALLEL=yes - ## Try link a simple MPI program. If fail, try again with -lmpi and - ## -lmpich. + ## Try link a simple MPI program. + { $as_echo "$as_me:${as_lineno-$LINENO}: checking whether a simple MPI-IO C program can be linked" >&5 +$as_echo_n "checking whether a simple MPI-IO C program can be linked... " >&6; } cat confdefs.h - <<_ACEOF >conftest.$ac_ext /* end confdefs.h. */ - -#ifdef FC_DUMMY_MAIN -#ifndef FC_DUMMY_MAIN_EQ_F77 -# ifdef __cplusplus - extern "C" -# endif - int FC_DUMMY_MAIN() { return 1; } -#endif -#endif -int -main () -{ -MPI_Init() - ; - return 0; -} -_ACEOF -if ac_fn_c_try_link "$LINENO"; then : - -else - { $as_echo "$as_me:${as_lineno-$LINENO}: checking for MPI_Init in -lmpi" >&5 -$as_echo_n "checking for MPI_Init in -lmpi... " >&6; } -if ${ac_cv_lib_mpi_MPI_Init+:} false; then : - $as_echo_n "(cached) " >&6 -else - ac_check_lib_save_LIBS=$LIBS -LIBS="-lmpi $LIBS" -cat confdefs.h - <<_ACEOF >conftest.$ac_ext -/* end confdefs.h. */ - -/* Override any GCC internal prototype to avoid an error. - Use char because int might match the return type of a GCC - builtin and then its argument prototype would still apply. */ -#ifdef __cplusplus -extern "C" -#endif -char MPI_Init (); -#ifdef FC_DUMMY_MAIN -#ifndef FC_DUMMY_MAIN_EQ_F77 -# ifdef __cplusplus - extern "C" -# endif - int FC_DUMMY_MAIN() { return 1; } -#endif -#endif -int -main () -{ -return MPI_Init (); - ; - return 0; -} -_ACEOF -if ac_fn_c_try_link "$LINENO"; then : - ac_cv_lib_mpi_MPI_Init=yes -else - ac_cv_lib_mpi_MPI_Init=no -fi -rm -f core conftest.err conftest.$ac_objext \ - conftest$ac_exeext conftest.$ac_ext -LIBS=$ac_check_lib_save_LIBS -fi -{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_mpi_MPI_Init" >&5 -$as_echo "$ac_cv_lib_mpi_MPI_Init" >&6; } -if test "x$ac_cv_lib_mpi_MPI_Init" = xyes; then : - cat >>confdefs.h <<_ACEOF -#define HAVE_LIBMPI 1 -_ACEOF - - LIBS="-lmpi $LIBS" - -else - { $as_echo "$as_me:${as_lineno-$LINENO}: checking for MPI_Init in -lmpich" >&5 -$as_echo_n "checking for MPI_Init in -lmpich... " >&6; } -if ${ac_cv_lib_mpich_MPI_Init+:} false; then : - $as_echo_n "(cached) " >&6 -else - ac_check_lib_save_LIBS=$LIBS -LIBS="-lmpich $LIBS" -cat confdefs.h - <<_ACEOF >conftest.$ac_ext -/* end confdefs.h. */ - -/* Override any GCC internal prototype to avoid an error. - Use char because int might match the return type of a GCC - builtin and then its argument prototype would still apply. */ -#ifdef __cplusplus -extern "C" -#endif -char MPI_Init (); -#ifdef FC_DUMMY_MAIN -#ifndef FC_DUMMY_MAIN_EQ_F77 -# ifdef __cplusplus - extern "C" -# endif - int FC_DUMMY_MAIN() { return 1; } -#endif -#endif -int -main () -{ -return MPI_Init (); - ; - return 0; -} -_ACEOF -if ac_fn_c_try_link "$LINENO"; then : - ac_cv_lib_mpich_MPI_Init=yes -else - ac_cv_lib_mpich_MPI_Init=no -fi -rm -f core conftest.err conftest.$ac_objext \ - conftest$ac_exeext conftest.$ac_ext -LIBS=$ac_check_lib_save_LIBS -fi -{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_mpich_MPI_Init" >&5 -$as_echo "$ac_cv_lib_mpich_MPI_Init" >&6; } -if test "x$ac_cv_lib_mpich_MPI_Init" = xyes; then : - cat >>confdefs.h <<_ACEOF -#define HAVE_LIBMPICH 1 -_ACEOF - - LIBS="-lmpich $LIBS" - -else - PARALLEL=no -fi - -fi - -fi -rm -f core conftest.err conftest.$ac_objext \ - conftest$ac_exeext conftest.$ac_ext - - ## Then try link a simple MPI-IO program. If fail, try again with - ## -lmpio. - if test "X$PARALLEL" = "Xyes"; then - cat confdefs.h - <<_ACEOF >conftest.$ac_ext -/* end confdefs.h. */ - -#ifdef FC_DUMMY_MAIN -#ifndef FC_DUMMY_MAIN_EQ_F77 -# ifdef __cplusplus - extern "C" -# endif - int FC_DUMMY_MAIN() { return 1; } -#endif -#endif -int -main () -{ -MPI_File_open() - ; - return 0; -} -_ACEOF -if ac_fn_c_try_link "$LINENO"; then : - -else - { $as_echo "$as_me:${as_lineno-$LINENO}: checking for MPI_File_open in -lmpio" >&5 -$as_echo_n "checking for MPI_File_open in -lmpio... " >&6; } -if ${ac_cv_lib_mpio_MPI_File_open+:} false; then : - $as_echo_n "(cached) " >&6 -else - ac_check_lib_save_LIBS=$LIBS -LIBS="-lmpio $LIBS" -cat confdefs.h - <<_ACEOF >conftest.$ac_ext -/* end confdefs.h. */ - -/* Override any GCC internal prototype to avoid an error. - Use char because int might match the return type of a GCC - builtin and then its argument prototype would still apply. */ -#ifdef __cplusplus -extern "C" -#endif -char MPI_File_open (); +#include <mpi.h> #ifdef FC_DUMMY_MAIN #ifndef FC_DUMMY_MAIN_EQ_F77 # ifdef __cplusplus @@ -28459,169 +27448,61 @@ char MPI_File_open (); int main () { -return MPI_File_open (); + MPI_Init(0, (void *)0); + MPI_File_open(0, (void *)0, 0, 0, (void *)0); ; return 0; } _ACEOF if ac_fn_c_try_link "$LINENO"; then : - ac_cv_lib_mpio_MPI_File_open=yes + { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5 +$as_echo "yes" >&6; } else - ac_cv_lib_mpio_MPI_File_open=no + { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5 +$as_echo "no" >&6; } + as_fn_error $? "unable to link a simple MPI-IO C program" "$LINENO" 5 fi rm -f core conftest.err conftest.$ac_objext \ conftest$ac_exeext conftest.$ac_ext -LIBS=$ac_check_lib_save_LIBS -fi -{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_mpio_MPI_File_open" >&5 -$as_echo "$ac_cv_lib_mpio_MPI_File_open" >&6; } -if test "x$ac_cv_lib_mpio_MPI_File_open" = xyes; then : - cat >>confdefs.h <<_ACEOF -#define HAVE_LIBMPIO 1 -_ACEOF - - LIBS="-lmpio $LIBS" -else - PARALLEL=no -fi + if test "X$HDF_FORTRAN" = "Xyes"; then -fi -rm -f core conftest.err conftest.$ac_objext \ - conftest$ac_exeext conftest.$ac_ext - fi - if test "X$HDF_FORTRAN" = "Xyes"; then - ## Change to the Fortran 90 language ac_ext=${ac_fc_srcext-f} ac_compile='$FC -c $FCFLAGS $ac_fcflags_srcext conftest.$ac_ext >&5' ac_link='$FC -o conftest$ac_exeext $FCFLAGS $LDFLAGS $ac_fcflags_srcext conftest.$ac_ext $LIBS >&5' ac_compiler_gnu=$ac_cv_fc_compiler_gnu - ## Try link a simple MPI program. If fail, try again with -lmpi. + { $as_echo "$as_me:${as_lineno-$LINENO}: checking whether a simple MPI-IO Fortran program can be linked" >&5 +$as_echo_n "checking whether a simple MPI-IO Fortran program can be linked... " >&6; } cat > conftest.$ac_ext <<_ACEOF - program main - include 'mpif.h' - integer:: ierr - call mpi_file_open( ierr ) - end + PROGRAM main + INCLUDE 'mpif.h' + INTEGER :: comm, amode, info, fh, ierror + CHARACTER(LEN=1) :: filename + CALL MPI_File_open( comm, filename, amode, info, fh, ierror) + END _ACEOF if ac_fn_fc_try_link "$LINENO"; then : - -else - { $as_echo "$as_me:${as_lineno-$LINENO}: checking for mpi_file_open in -lmpi" >&5 -$as_echo_n "checking for mpi_file_open in -lmpi... " >&6; } -if ${ac_cv_lib_mpi_mpi_file_open+:} false; then : - $as_echo_n "(cached) " >&6 -else - ac_check_lib_save_LIBS=$LIBS -LIBS="-lmpi $LIBS" -cat > conftest.$ac_ext <<_ACEOF - program main - call mpi_file_open - end -_ACEOF -if ac_fn_fc_try_link "$LINENO"; then : - ac_cv_lib_mpi_mpi_file_open=yes -else - ac_cv_lib_mpi_mpi_file_open=no -fi -rm -f core conftest.err conftest.$ac_objext \ - conftest$ac_exeext conftest.$ac_ext -LIBS=$ac_check_lib_save_LIBS -fi -{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_mpi_mpi_file_open" >&5 -$as_echo "$ac_cv_lib_mpi_mpi_file_open" >&6; } -if test "x$ac_cv_lib_mpi_mpi_file_open" = xyes; then : - cat >>confdefs.h <<_ACEOF -#define HAVE_LIBMPI 1 -_ACEOF - - LIBS="-lmpi $LIBS" - -else - PARALLEL=no -fi - -fi -rm -f core conftest.err conftest.$ac_objext \ - conftest$ac_exeext conftest.$ac_ext - - ## Then try link a simple MPI-IO program. If fail, try again with - ## -lmpio. - if test "X$PARALLEL" = "Xyes"; then - cat > conftest.$ac_ext <<_ACEOF - - program main - include 'mpif.h' - integer:: ierr - call mpi_file_open( ierr ) - end -_ACEOF -if ac_fn_fc_try_link "$LINENO"; then : - -else - { $as_echo "$as_me:${as_lineno-$LINENO}: checking for mpi_file_open in -lmpio" >&5 -$as_echo_n "checking for mpi_file_open in -lmpio... " >&6; } -if ${ac_cv_lib_mpio_mpi_file_open+:} false; then : - $as_echo_n "(cached) " >&6 -else - ac_check_lib_save_LIBS=$LIBS -LIBS="-lmpio $LIBS" -cat > conftest.$ac_ext <<_ACEOF - program main - call mpi_file_open - end -_ACEOF -if ac_fn_fc_try_link "$LINENO"; then : - ac_cv_lib_mpio_mpi_file_open=yes -else - ac_cv_lib_mpio_mpi_file_open=no -fi -rm -f core conftest.err conftest.$ac_objext \ - conftest$ac_exeext conftest.$ac_ext -LIBS=$ac_check_lib_save_LIBS -fi -{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_mpio_mpi_file_open" >&5 -$as_echo "$ac_cv_lib_mpio_mpi_file_open" >&6; } -if test "x$ac_cv_lib_mpio_mpi_file_open" = xyes; then : - cat >>confdefs.h <<_ACEOF -#define HAVE_LIBMPIO 1 -_ACEOF - - LIBS="-lmpio $LIBS" - + { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5 +$as_echo "yes" >&6; } else - PARALLEL=no -fi - + { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5 +$as_echo "no" >&6; } + as_fn_error $? "unable to link a simple MPI-IO Fortran program" "$LINENO" 5 fi rm -f core conftest.err conftest.$ac_objext \ conftest$ac_exeext conftest.$ac_ext - fi - ## Change to the C language ac_ext=c ac_cpp='$CPP $CPPFLAGS' ac_compile='$CC -c $CFLAGS $CPPFLAGS conftest.$ac_ext >&5' ac_link='$CC -o conftest$ac_exeext $CFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5' ac_compiler_gnu=$ac_cv_c_compiler_gnu - fi - ## Set RUNPARALLEL to mpiexec if not set yet. - ## Check for building on Cray if RUNPARALLEL is not yet set by checking - ## for 'aprun' command (which is the parallel job launcher, like mpiexec). - if test "X$PARALLEL" = "Xyes" -a -z "$RUNPARALLEL"; then - ## Find the path where aprun is located. - for path in `echo $PATH | ${TR} ":" " "`; do - if test -x $path/aprun; then - RUNPARALLEL="aprun -q -n \$\${NPROCS:=6}" - break; - fi - done fi ## Set RUNPARALLEL to mpiexec if not set yet. @@ -28661,39 +27542,6 @@ $as_echo_n "checking prefix for running in parallel... " >&6; } { $as_echo "$as_me:${as_lineno-$LINENO}: result: $RUNPARALLEL" >&5 $as_echo "$RUNPARALLEL" >&6; } - ## Check that we can link a simple MPI and MPI-IO application - { $as_echo "$as_me:${as_lineno-$LINENO}: checking whether a simple MPI-IO program can be linked" >&5 -$as_echo_n "checking whether a simple MPI-IO program can be linked... " >&6; } - cat confdefs.h - <<_ACEOF >conftest.$ac_ext -/* end confdefs.h. */ - -#ifdef FC_DUMMY_MAIN -#ifndef FC_DUMMY_MAIN_EQ_F77 -# ifdef __cplusplus - extern "C" -# endif - int FC_DUMMY_MAIN() { return 1; } -#endif -#endif -int -main () -{ -MPI_Init(); MPI_File_open(); - ; - return 0; -} -_ACEOF -if ac_fn_c_try_link "$LINENO"; then : - { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5 -$as_echo "yes" >&6; } -else - { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5 -$as_echo "no" >&6; } - as_fn_error $? "unable to link a simple MPI-IO application" "$LINENO" 5 -fi -rm -f core conftest.err conftest.$ac_objext \ - conftest$ac_exeext conftest.$ac_ext - ## There *must* be some way to run in parallel even if it's just the ## word `none'. if test -z "$RUNPARALLEL"; then @@ -28701,7 +27549,8 @@ rm -f core conftest.err conftest.$ac_objext \ fi ## If RUNSERIAL or RUNPARALLEL is the word `none' then replace it with - ## the empty string. + ## the empty string. This means that no launch commands were requested, + ## so we will not use any launch commands. if test "X$RUNSERIAL" = "Xnone"; then RUNSERIAL="" fi @@ -28877,61 +27726,6 @@ else unset MPE fi - { $as_echo "$as_me:${as_lineno-$LINENO}: checking for MPE_Init_mpi_io in -llmpe" >&5 -$as_echo_n "checking for MPE_Init_mpi_io in -llmpe... " >&6; } -if ${ac_cv_lib_lmpe_MPE_Init_mpi_io+:} false; then : - $as_echo_n "(cached) " >&6 -else - ac_check_lib_save_LIBS=$LIBS -LIBS="-llmpe $LIBS" -cat confdefs.h - <<_ACEOF >conftest.$ac_ext -/* end confdefs.h. */ - -/* Override any GCC internal prototype to avoid an error. - Use char because int might match the return type of a GCC - builtin and then its argument prototype would still apply. */ -#ifdef __cplusplus -extern "C" -#endif -char MPE_Init_mpi_io (); -#ifdef FC_DUMMY_MAIN -#ifndef FC_DUMMY_MAIN_EQ_F77 -# ifdef __cplusplus - extern "C" -# endif - int FC_DUMMY_MAIN() { return 1; } -#endif -#endif -int -main () -{ -return MPE_Init_mpi_io (); - ; - return 0; -} -_ACEOF -if ac_fn_c_try_link "$LINENO"; then : - ac_cv_lib_lmpe_MPE_Init_mpi_io=yes -else - ac_cv_lib_lmpe_MPE_Init_mpi_io=no -fi -rm -f core conftest.err conftest.$ac_objext \ - conftest$ac_exeext conftest.$ac_ext -LIBS=$ac_check_lib_save_LIBS -fi -{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_lmpe_MPE_Init_mpi_io" >&5 -$as_echo "$ac_cv_lib_lmpe_MPE_Init_mpi_io" >&6; } -if test "x$ac_cv_lib_lmpe_MPE_Init_mpi_io" = xyes; then : - cat >>confdefs.h <<_ACEOF -#define HAVE_LIBLMPE 1 -_ACEOF - - LIBS="-llmpe $LIBS" - -else - unset MPE -fi - ;; *) case "$withval" in @@ -29052,62 +27846,6 @@ else LDFLAGS="$saved_LDFLAGS"; AM_LDFLAGS="$saved_AM_LDFLAGS"; unset MPE fi - { $as_echo "$as_me:${as_lineno-$LINENO}: checking for MPE_Init_mpi_io in -llmpe" >&5 -$as_echo_n "checking for MPE_Init_mpi_io in -llmpe... " >&6; } -if ${ac_cv_lib_lmpe_MPE_Init_mpi_io+:} false; then : - $as_echo_n "(cached) " >&6 -else - ac_check_lib_save_LIBS=$LIBS -LIBS="-llmpe $LIBS" -cat confdefs.h - <<_ACEOF >conftest.$ac_ext -/* end confdefs.h. */ - -/* Override any GCC internal prototype to avoid an error. - Use char because int might match the return type of a GCC - builtin and then its argument prototype would still apply. */ -#ifdef __cplusplus -extern "C" -#endif -char MPE_Init_mpi_io (); -#ifdef FC_DUMMY_MAIN -#ifndef FC_DUMMY_MAIN_EQ_F77 -# ifdef __cplusplus - extern "C" -# endif - int FC_DUMMY_MAIN() { return 1; } -#endif -#endif -int -main () -{ -return MPE_Init_mpi_io (); - ; - return 0; -} -_ACEOF -if ac_fn_c_try_link "$LINENO"; then : - ac_cv_lib_lmpe_MPE_Init_mpi_io=yes -else - ac_cv_lib_lmpe_MPE_Init_mpi_io=no -fi -rm -f core conftest.err conftest.$ac_objext \ - conftest$ac_exeext conftest.$ac_ext -LIBS=$ac_check_lib_save_LIBS -fi -{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_lmpe_MPE_Init_mpi_io" >&5 -$as_echo "$ac_cv_lib_lmpe_MPE_Init_mpi_io" >&6; } -if test "x$ac_cv_lib_lmpe_MPE_Init_mpi_io" = xyes; then : - cat >>confdefs.h <<_ACEOF -#define HAVE_LIBLMPE 1 -_ACEOF - - LIBS="-llmpe $LIBS" - -else - LDFLAGS="$saved_LDFLAGS"; AM_LDFLAGS="$saved_AM_LDFLAGS"; unset MPE -fi - - else { $as_echo "$as_me:${as_lineno-$LINENO}: checking for MPE_Init_log in -lmpe" >&5 $as_echo_n "checking for MPE_Init_log in -lmpe... " >&6; } @@ -29164,61 +27902,6 @@ else unset MPE fi - { $as_echo "$as_me:${as_lineno-$LINENO}: checking for MPE_Init_mpi_io in -llmpe" >&5 -$as_echo_n "checking for MPE_Init_mpi_io in -llmpe... " >&6; } -if ${ac_cv_lib_lmpe_MPE_Init_mpi_io+:} false; then : - $as_echo_n "(cached) " >&6 -else - ac_check_lib_save_LIBS=$LIBS -LIBS="-llmpe $LIBS" -cat confdefs.h - <<_ACEOF >conftest.$ac_ext -/* end confdefs.h. */ - -/* Override any GCC internal prototype to avoid an error. - Use char because int might match the return type of a GCC - builtin and then its argument prototype would still apply. */ -#ifdef __cplusplus -extern "C" -#endif -char MPE_Init_mpi_io (); -#ifdef FC_DUMMY_MAIN -#ifndef FC_DUMMY_MAIN_EQ_F77 -# ifdef __cplusplus - extern "C" -# endif - int FC_DUMMY_MAIN() { return 1; } -#endif -#endif -int -main () -{ -return MPE_Init_mpi_io (); - ; - return 0; -} -_ACEOF -if ac_fn_c_try_link "$LINENO"; then : - ac_cv_lib_lmpe_MPE_Init_mpi_io=yes -else - ac_cv_lib_lmpe_MPE_Init_mpi_io=no -fi -rm -f core conftest.err conftest.$ac_objext \ - conftest$ac_exeext conftest.$ac_ext -LIBS=$ac_check_lib_save_LIBS -fi -{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_lmpe_MPE_Init_mpi_io" >&5 -$as_echo "$ac_cv_lib_lmpe_MPE_Init_mpi_io" >&6; } -if test "x$ac_cv_lib_lmpe_MPE_Init_mpi_io" = xyes; then : - cat >>confdefs.h <<_ACEOF -#define HAVE_LIBLMPE 1 -_ACEOF - - LIBS="-llmpe $LIBS" - -else - unset MPE -fi - fi ;; esac @@ -29230,6 +27913,7 @@ $as_echo "#define HAVE_MPE 1" >>confdefs.h fi fi + ## ---------------------------------------------------------------------- ## Turn on internal I/O filters by setting macros in header files ## Internal I/O filters are contained entirely within the library and do @@ -29303,147 +27987,70 @@ $as_echo "#define HAVE_FILTER_SCALEOFFSET 1" >>confdefs.h done fi -## ---------------------------------------------------------------------- -## This is defined only when we're using CodeWarrior, since it has a -## broken "open()" call. -# -if test 1 = 2; then - -$as_echo "#define NO_SHARED_WRITING 1" >>confdefs.h -fi - -## -------------------------------------------------------------------------- -## Should the Default Virtual File Driver be compiled? +## ---------------------------------------------------------------------- +## Check if Direct I/O driver is enabled by --enable-direct-vfd ## -{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for Default Virtual File Driver definition" >&5 -$as_echo_n "checking for Default Virtual File Driver definition... " >&6; } +## Check these regardless. If the checks are moved inside the main +## direct VFD block, the output is nested. -# Check whether --with-default-vfd was given. -if test "${with_default_vfd+set}" = set; then : - withval=$with_default_vfd; +if ${hdf5_cv_direct_io+:} false; then : + $as_echo_n "(cached) " >&6 +else + ac_fn_c_check_decl "$LINENO" "O_DIRECT" "ac_cv_have_decl_O_DIRECT" "#include <fcntl.h> +" +if test "x$ac_cv_have_decl_O_DIRECT" = xyes; then : + hdf5_cv_direct_io=yes else - withval=sec2 + hdf5_cv_direct_io=no fi +fi -if test "X$withval" = "Xsec2"; then - { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5 -$as_echo "yes" >&6; } - default_vfd=yes - vfd_define=H5FD_SEC2 -elif test "X$withval" = "Xstdio"; then - { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5 -$as_echo "yes" >&6; } - default_vfd=yes - vfd_define=H5FD_STDIO +if ${hdf5_cv_posix_memalign+:} false; then : + $as_echo_n "(cached) " >&6 else - { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5 -$as_echo "no" >&6; } - default_vfd=no + ac_fn_c_check_func "$LINENO" "posix_memalign" "ac_cv_func_posix_memalign" +if test "x$ac_cv_func_posix_memalign" = xyes; then : + hdf5_cv_posix_memalign=yes +else + hdf5_cv_posix_memalign=no fi -if test "X$default_vfd" = "Xyes"; then - -cat >>confdefs.h <<_ACEOF -#define DEFAULT_VFD $vfd_define -_ACEOF - fi -## ---------------------------------------------------------------------- -## Check if Direct I/O driver is enabled by --enable-direct-vfd -## -{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for Direct Virtual File Driver support" >&5 -$as_echo_n "checking for Direct Virtual File Driver support... " >&6; } +{ $as_echo "$as_me:${as_lineno-$LINENO}: checking if the direct I/O virtual file driver (VFD) is enabled" >&5 +$as_echo_n "checking if the direct I/O virtual file driver (VFD) is enabled... " >&6; } # Check whether --enable-direct-vfd was given. if test "${enable_direct_vfd+set}" = set; then : enableval=$enable_direct_vfd; DIRECT_VFD=$enableval else - DIRECT_VFD=yes -fi - - -if test "$DIRECT_VFD" = "yes"; then - if ${hdf5_cv_direct_io+:} false; then : - $as_echo_n "(cached) " >&6 -else - if test "$cross_compiling" = yes; then : - { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5 -$as_echo "$as_me: error: in \`$ac_pwd':" >&2;} -as_fn_error $? "cannot run test program while cross compiling -See \`config.log' for more details" "$LINENO" 5; } -else - cat confdefs.h - <<_ACEOF >conftest.$ac_ext -/* end confdefs.h. */ - - #include <sys/types.h> - #include <sys/stat.h> - #include <fcntl.h> - int main(void) - { - int fid; - if((fid=open("tst_file", O_CREAT | O_TRUNC | O_DIRECT, 0755))<0) - exit(1); - close(fid); - remove("tst_file"); - exit (0); - } -_ACEOF -if ac_fn_c_try_run "$LINENO"; then : - cat confdefs.h - <<_ACEOF >conftest.$ac_ext -/* end confdefs.h. */ - -#ifdef FC_DUMMY_MAIN -#ifndef FC_DUMMY_MAIN_EQ_F77 -# ifdef __cplusplus - extern "C" -# endif - int FC_DUMMY_MAIN() { return 1; } -#endif -#endif -int -main () -{ -posix_memalign() - ; - return 0; -} -_ACEOF -if ac_fn_c_try_link "$LINENO"; then : - hdf5_cv_direct_io=yes -else - hdf5_cv_direct_io=no -fi -rm -f core conftest.err conftest.$ac_objext \ - conftest$ac_exeext conftest.$ac_ext -else - hdf5_cv_direct_io=no -fi -rm -f core *.core core.conftest.* gmon.out bb.out conftest$ac_exeext \ - conftest.$ac_objext conftest.beam conftest.$ac_ext -fi - + DIRECT_VFD=no fi - if test ${hdf5_cv_direct_io} = "yes"; then - { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5 +if test "X$DIRECT_VFD" = "Xyes"; then + if test ${hdf5_cv_direct_io} = "yes" && test ${hdf5_cv_posix_memalign} = "yes" ; then + { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5 $as_echo "yes" >&6; } $as_echo "#define HAVE_DIRECT 1" >>confdefs.h - else - { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5 + else + { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5 $as_echo "no" >&6; } - DIRECT_VFD=no - fi + DIRECT_VFD=no + as_fn_error $? "The direct VFD was requested but cannot be built. This is either + due to O_DIRECT not being found in fcntl.h or a lack of + posix_memalign() on your system. Please re-configure without + specifying --enable-direct-vfd." "$LINENO" 5 + fi else - { $as_echo "$as_me:${as_lineno-$LINENO}: result: suppressed" >&5 -$as_echo "suppressed" >&6; } + { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5 +$as_echo "no" >&6; } fi if test "X$DIRECT_VFD" = "Xyes"; then @@ -30950,39 +29557,6 @@ if test -n "$AM_CPPFLAGS"; then AM_CPPFLAGS=$TEMP_CPPFLAGS fi -## ---------------------------------------------------------------------- -## Check if they would like the High Level library compiled -## - - HL="" -## name of fortran folder inside "hl", if FORTRAN compile is requested - HL_FOR="" -{ $as_echo "$as_me:${as_lineno-$LINENO}: checking if high level library is enabled" >&5 -$as_echo_n "checking if high level library is enabled... " >&6; } -# Check whether --enable-hl was given. -if test "${enable_hl+set}" = set; then : - enableval=$enable_hl; HDF5_HL=$enableval -else - HDF5_HL=yes -fi - - -if test "X$HDF5_HL" = "Xyes"; then - echo "yes" - HL="hl" - -$as_echo "#define INCLUDE_HL 1" >>confdefs.h - - -## Check if Fortran's default real is double precision. If it is and HL is being built then configure -## should fail due to bug HDFFV-889. - if test "X$FORTRAN_DEFAULT_REALisDBLE" = "Xyes"; then - as_fn_error $? "Fortran high-level routines are not supported when the default REAL is DOUBLE PRECISION, use configure option --disable-hl." "$LINENO" 5 - fi -else - echo "no" -fi - ## ---------------------------------------------------------------------- ## Some programs shouldn't be built by default (e.g., programs to generate @@ -31732,7 +30306,7 @@ Usage: $0 [OPTIONS] Report bugs to <bug-libtool@gnu.org>." lt_cl_version="\ -HDF5 config.lt 1.9.212 +HDF5 config.lt 1.9.215 configured by $0, generated by GNU Autoconf 2.69. Copyright (C) 2011 Free Software Foundation, Inc. @@ -33874,7 +32448,7 @@ cat >>$CONFIG_STATUS <<\_ACEOF || ac_write_fail=1 # report actual input values of CONFIG_FILES etc. instead of their # values after options handling. ac_log=" -This file was extended by HDF5 $as_me 1.9.212, which was +This file was extended by HDF5 $as_me 1.9.215, which was generated by GNU Autoconf 2.69. Invocation command line was CONFIG_FILES = $CONFIG_FILES @@ -33940,7 +32514,7 @@ _ACEOF cat >>$CONFIG_STATUS <<_ACEOF || ac_write_fail=1 ac_cs_config="`$as_echo "$ac_configure_args" | sed 's/^ //; s/[\\""\`\$]/\\\\&/g'`" ac_cs_version="\\ -HDF5 config.status 1.9.212 +HDF5 config.status 1.9.215 configured by $0, generated by GNU Autoconf 2.69, with options \\"\$ac_cs_config\\" |