[svn-r1753] Changes since 19991007

----------------------

./configure.in
./src/H5config.h.in	[REGENERATED]
	The /usr/ncsa/{include,lib} directories are only added if they
	actually exist. This fixes a warning on some systems.

	Checks for the <pdb.h> header file and also for either the PDB or Silo
	library, and if found prepares to compile the pdb2hdf program.

./config/distdep
	Relative path names for include files are changed to base names since
	the makefile contains the logic for searching and since it's likely
	that building the .distdep files happed from a location other than
	where they would be used in the file system.

./config/conclude.in
	Fixed shell errors when `for' loops iterate over nothing for the
	`uninstall' target.

./src/H5D.c
./src/H5Oefl.c
	File names for the external files are added to the heap when the
	dataset is created instead of when the object header is written. This
	fixes a rare infinite recursion bug.

./src/H5FD.c
./src/H5FDpublic.h
	Optimization to the free list causes H5FD_alloc() usage to go from >10
	seconds to <0.4 second for one example (converting a 30MB equation of
	state file from PDB to HDF5 format). The optimization is to simply
	keep track of the largest item in the free list and not search the
	free list when the largest item is not big enough to satisfy the
	request.

./src/H5FDcore.c
./src/H5FDcore.h
./test/h5test.c
	If the `backing_store' property is true then a flush causes the entire
	contents of memory to be written to the specified file. This is  in
	preparation for the ASCI/red optimizations and is currently tested by
	the pdb2hdf `--cached' switch.

./src/H5Odtypes.c
	Wrapped three long lines.

./tools/Makefile.in
./tools/pdb2hdf.c		[NEW]
	A PDB-to-HDF5 translator. It only translates meta data -- the
	resulting HDF5 points into the PDB file for the raw data.

1 files changed, 359 insertions, 219 deletions

diff --git a/configure b/configure
index 3f03ff0..ff283db 100755
--- a/configure
+++ b/configure
@@ -3436,12 +3436,15 @@ H5TOH4=h5toh4
 
 TESTH5TOH4='$(srcdir)/testh5toh4'
 
+test -d /usr/ncsa/include && CPPFLAGS="$CPPFLAGS -I/usr/ncsa/include"
+test -d /usr/ncsa/lib && LDFLAGS="$LDFLAGS -L/usr/ncsa/lib"
+
 # Check whether --with-hdf4 or --without-hdf4 was given.
 if test "${with_hdf4+set}" = set; then
   withval="$with_hdf4"
   :
 else
-  withval=/usr/ncsa/include,/usr/ncsa/lib
+  withval=yes
 fi
 
 case $withval in
@@ -3450,17 +3453,17 @@ case $withval in
 do
 ac_safe=`echo "$ac_hdr" | sed 'y%./+-%__p_%'`
 echo $ac_n "checking for $ac_hdr""... $ac_c" 1>&6
-echo "configure:3454: checking for $ac_hdr" >&5
+echo "configure:3457: checking for $ac_hdr" >&5
 if eval "test \"`echo '$''{'ac_cv_header_$ac_safe'+set}'`\" = set"; then
   echo $ac_n "(cached) $ac_c" 1>&6
 else
   cat > conftest.$ac_ext <<EOF
-#line 3459 "configure"
+#line 3462 "configure"
 #include "confdefs.h"
 #include <$ac_hdr>
 EOF
 ac_try="$ac_cpp conftest.$ac_ext >/dev/null 2>conftest.out"
-{ (eval echo configure:3464: \"$ac_try\") 1>&5; (eval $ac_try) 2>&5; }
+{ (eval echo configure:3467: \"$ac_try\") 1>&5; (eval $ac_try) 2>&5; }
 ac_err=`grep -v '^ *+' conftest.out`
 if test -z "$ac_err"; then
   rm -rf conftest*
@@ -3488,7 +3491,7 @@ fi
 done
 
 	echo $ac_n "checking for deflate in -lz""... $ac_c" 1>&6
-echo "configure:3492: checking for deflate in -lz" >&5
+echo "configure:3495: checking for deflate in -lz" >&5
 ac_lib_var=`echo z'_'deflate | sed 'y%./+-%__p_%'`
 if eval "test \"`echo '$''{'ac_cv_lib_$ac_lib_var'+set}'`\" = set"; then
   echo $ac_n "(cached) $ac_c" 1>&6
@@ -3496,7 +3499,7 @@ else
   ac_save_LIBS="$LIBS"
 LIBS="-lz  $LIBS"
 cat > conftest.$ac_ext <<EOF
-#line 3500 "configure"
+#line 3503 "configure"
 #include "confdefs.h"
 /* Override any gcc2 internal prototype to avoid an error.  */
 /* We use char because int might match the return type of a gcc2
@@ -3507,7 +3510,7 @@ int main() {
 deflate()
 ; return 0; }
 EOF
-if { (eval echo configure:3511: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
+if { (eval echo configure:3514: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
   rm -rf conftest*
   eval "ac_cv_lib_$ac_lib_var=yes"
 else
@@ -3536,7 +3539,7 @@ unset H5TOH4 TESTH5TOH4
 fi
 
 	echo $ac_n "checking for jpeg_start_compress in -ljpeg""... $ac_c" 1>&6
-echo "configure:3540: checking for jpeg_start_compress in -ljpeg" >&5
+echo "configure:3543: checking for jpeg_start_compress in -ljpeg" >&5
 ac_lib_var=`echo jpeg'_'jpeg_start_compress | sed 'y%./+-%__p_%'`
 if eval "test \"`echo '$''{'ac_cv_lib_$ac_lib_var'+set}'`\" = set"; then
   echo $ac_n "(cached) $ac_c" 1>&6
@@ -3544,7 +3547,7 @@ else
   ac_save_LIBS="$LIBS"
 LIBS="-ljpeg  $LIBS"
 cat > conftest.$ac_ext <<EOF
-#line 3548 "configure"
+#line 3551 "configure"
 #include "confdefs.h"
 /* Override any gcc2 internal prototype to avoid an error.  */
 /* We use char because int might match the return type of a gcc2
@@ -3555,7 +3558,7 @@ int main() {
 jpeg_start_compress()
 ; return 0; }
 EOF
-if { (eval echo configure:3559: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
+if { (eval echo configure:3562: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
   rm -rf conftest*
   eval "ac_cv_lib_$ac_lib_var=yes"
 else
@@ -3584,7 +3587,7 @@ unset H5TOH4 TESTH5TOH4
 fi
 
 	echo $ac_n "checking for Hstartaccess in -ldf""... $ac_c" 1>&6
-echo "configure:3588: checking for Hstartaccess in -ldf" >&5
+echo "configure:3591: checking for Hstartaccess in -ldf" >&5
 ac_lib_var=`echo df'_'Hstartaccess | sed 'y%./+-%__p_%'`
 if eval "test \"`echo '$''{'ac_cv_lib_$ac_lib_var'+set}'`\" = set"; then
   echo $ac_n "(cached) $ac_c" 1>&6
@@ -3592,7 +3595,7 @@ else
   ac_save_LIBS="$LIBS"
 LIBS="-ldf  $LIBS"
 cat > conftest.$ac_ext <<EOF
-#line 3596 "configure"
+#line 3599 "configure"
 #include "confdefs.h"
 /* Override any gcc2 internal prototype to avoid an error.  */
 /* We use char because int might match the return type of a gcc2
@@ -3603,7 +3606,7 @@ int main() {
 Hstartaccess()
 ; return 0; }
 EOF
-if { (eval echo configure:3607: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
+if { (eval echo configure:3610: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
   rm -rf conftest*
   eval "ac_cv_lib_$ac_lib_var=yes"
 else
@@ -3632,7 +3635,7 @@ unset H5TOH4 TESTH5TOH4
 fi
 
 	echo $ac_n "checking for SDstart in -lmfhdf""... $ac_c" 1>&6
-echo "configure:3636: checking for SDstart in -lmfhdf" >&5
+echo "configure:3639: checking for SDstart in -lmfhdf" >&5
 ac_lib_var=`echo mfhdf'_'SDstart | sed 'y%./+-%__p_%'`
 if eval "test \"`echo '$''{'ac_cv_lib_$ac_lib_var'+set}'`\" = set"; then
   echo $ac_n "(cached) $ac_c" 1>&6
@@ -3640,7 +3643,7 @@ else
   ac_save_LIBS="$LIBS"
 LIBS="-lmfhdf  $LIBS"
 cat > conftest.$ac_ext <<EOF
-#line 3644 "configure"
+#line 3647 "configure"
 #include "confdefs.h"
 /* Override any gcc2 internal prototype to avoid an error.  */
 /* We use char because int might match the return type of a gcc2
@@ -3651,7 +3654,7 @@ int main() {
 SDstart()
 ; return 0; }
 EOF
-if { (eval echo configure:3655: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
+if { (eval echo configure:3658: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
   rm -rf conftest*
   eval "ac_cv_lib_$ac_lib_var=yes"
 else
@@ -3682,7 +3685,7 @@ fi
 	;;
     no)
 	echo $ac_n "checking for HDF4""... $ac_c" 1>&6
-echo "configure:3686: checking for HDF4" >&5
+echo "configure:3689: checking for HDF4" >&5
 	echo "$ac_t""suppressed" 1>&6
 	unset H5TOH4 TESTH5TOH4
 	;;
@@ -3695,17 +3698,17 @@ echo "configure:3686: checking for HDF4" >&5
 do
 ac_safe=`echo "$ac_hdr" | sed 'y%./+-%__p_%'`
 echo $ac_n "checking for $ac_hdr""... $ac_c" 1>&6
-echo "configure:3699: checking for $ac_hdr" >&5
+echo "configure:3702: checking for $ac_hdr" >&5
 if eval "test \"`echo '$''{'ac_cv_header_$ac_safe'+set}'`\" = set"; then
   echo $ac_n "(cached) $ac_c" 1>&6
 else
   cat > conftest.$ac_ext <<EOF
-#line 3704 "configure"
+#line 3707 "configure"
 #include "confdefs.h"
 #include <$ac_hdr>
 EOF
 ac_try="$ac_cpp conftest.$ac_ext >/dev/null 2>conftest.out"
-{ (eval echo configure:3709: \"$ac_try\") 1>&5; (eval $ac_try) 2>&5; }
+{ (eval echo configure:3712: \"$ac_try\") 1>&5; (eval $ac_try) 2>&5; }
 ac_err=`grep -v '^ *+' conftest.out`
 if test -z "$ac_err"; then
   rm -rf conftest*
@@ -3739,17 +3742,17 @@ done
 do
 ac_safe=`echo "$ac_hdr" | sed 'y%./+-%__p_%'`
 echo $ac_n "checking for $ac_hdr""... $ac_c" 1>&6
-echo "configure:3743: checking for $ac_hdr" >&5
+echo "configure:3746: checking for $ac_hdr" >&5
 if eval "test \"`echo '$''{'ac_cv_header_$ac_safe'+set}'`\" = set"; then
   echo $ac_n "(cached) $ac_c" 1>&6
 else
   cat > conftest.$ac_ext <<EOF
-#line 3748 "configure"
+#line 3751 "configure"
 #include "confdefs.h"
 #include <$ac_hdr>
 EOF
 ac_try="$ac_cpp conftest.$ac_ext >/dev/null 2>conftest.out"
-{ (eval echo configure:3753: \"$ac_try\") 1>&5; (eval $ac_try) 2>&5; }
+{ (eval echo configure:3756: \"$ac_try\") 1>&5; (eval $ac_try) 2>&5; }
 ac_err=`grep -v '^ *+' conftest.out`
 if test -z "$ac_err"; then
   rm -rf conftest*
@@ -3782,7 +3785,7 @@ done
 	    saved_LDFLAGS="$LDFLAGS"
 	    LDFLAGS="$LDFLAGS -L$hdf4_lib"
         echo $ac_n "checking for deflate in -lz""... $ac_c" 1>&6
-echo "configure:3786: checking for deflate in -lz" >&5
+echo "configure:3789: checking for deflate in -lz" >&5
 ac_lib_var=`echo z'_'deflate | sed 'y%./+-%__p_%'`
 if eval "test \"`echo '$''{'ac_cv_lib_$ac_lib_var'+set}'`\" = set"; then
   echo $ac_n "(cached) $ac_c" 1>&6
@@ -3790,7 +3793,7 @@ else
   ac_save_LIBS="$LIBS"
 LIBS="-lz  $LIBS"
 cat > conftest.$ac_ext <<EOF
-#line 3794 "configure"
+#line 3797 "configure"
 #include "confdefs.h"
 /* Override any gcc2 internal prototype to avoid an error.  */
 /* We use char because int might match the return type of a gcc2
@@ -3801,7 +3804,7 @@ int main() {
 deflate()
 ; return 0; }
 EOF
-if { (eval echo configure:3805: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
+if { (eval echo configure:3808: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
   rm -rf conftest*
   eval "ac_cv_lib_$ac_lib_var=yes"
 else
@@ -3830,7 +3833,7 @@ unset H5TOH4 TESTH5TOH4
 fi
 
         echo $ac_n "checking for jpeg_start_compress in -ljpeg""... $ac_c" 1>&6
-echo "configure:3834: checking for jpeg_start_compress in -ljpeg" >&5
+echo "configure:3837: checking for jpeg_start_compress in -ljpeg" >&5
 ac_lib_var=`echo jpeg'_'jpeg_start_compress | sed 'y%./+-%__p_%'`
 if eval "test \"`echo '$''{'ac_cv_lib_$ac_lib_var'+set}'`\" = set"; then
   echo $ac_n "(cached) $ac_c" 1>&6
@@ -3838,7 +3841,7 @@ else
   ac_save_LIBS="$LIBS"
 LIBS="-ljpeg  $LIBS"
 cat > conftest.$ac_ext <<EOF
-#line 3842 "configure"
+#line 3845 "configure"
 #include "confdefs.h"
 /* Override any gcc2 internal prototype to avoid an error.  */
 /* We use char because int might match the return type of a gcc2
@@ -3849,7 +3852,7 @@ int main() {
 jpeg_start_compress()
 ; return 0; }
 EOF
-if { (eval echo configure:3853: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
+if { (eval echo configure:3856: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
   rm -rf conftest*
   eval "ac_cv_lib_$ac_lib_var=yes"
 else
@@ -3878,7 +3881,7 @@ unset H5TOH4 TESTH5TOH4
 fi
 
         echo $ac_n "checking for Hstartaccess in -ldf""... $ac_c" 1>&6
-echo "configure:3882: checking for Hstartaccess in -ldf" >&5
+echo "configure:3885: checking for Hstartaccess in -ldf" >&5
 ac_lib_var=`echo df'_'Hstartaccess | sed 'y%./+-%__p_%'`
 if eval "test \"`echo '$''{'ac_cv_lib_$ac_lib_var'+set}'`\" = set"; then
   echo $ac_n "(cached) $ac_c" 1>&6
@@ -3886,7 +3889,7 @@ else
   ac_save_LIBS="$LIBS"
 LIBS="-ldf  $LIBS"
 cat > conftest.$ac_ext <<EOF
-#line 3890 "configure"
+#line 3893 "configure"
 #include "confdefs.h"
 /* Override any gcc2 internal prototype to avoid an error.  */
 /* We use char because int might match the return type of a gcc2
@@ -3897,7 +3900,7 @@ int main() {
 Hstartaccess()
 ; return 0; }
 EOF
-if { (eval echo configure:3901: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
+if { (eval echo configure:3904: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
   rm -rf conftest*
   eval "ac_cv_lib_$ac_lib_var=yes"
 else
@@ -3926,7 +3929,7 @@ unset H5TOH4 TESTH5TOH4
 fi
 
         echo $ac_n "checking for SDstart in -lmfhdf""... $ac_c" 1>&6
-echo "configure:3930: checking for SDstart in -lmfhdf" >&5
+echo "configure:3933: checking for SDstart in -lmfhdf" >&5
 ac_lib_var=`echo mfhdf'_'SDstart | sed 'y%./+-%__p_%'`
 if eval "test \"`echo '$''{'ac_cv_lib_$ac_lib_var'+set}'`\" = set"; then
   echo $ac_n "(cached) $ac_c" 1>&6
@@ -3934,7 +3937,7 @@ else
   ac_save_LIBS="$LIBS"
 LIBS="-lmfhdf  $LIBS"
 cat > conftest.$ac_ext <<EOF
-#line 3938 "configure"
+#line 3941 "configure"
 #include "confdefs.h"
 /* Override any gcc2 internal prototype to avoid an error.  */
 /* We use char because int might match the return type of a gcc2
@@ -3945,7 +3948,7 @@ int main() {
 SDstart()
 ; return 0; }
 EOF
-if { (eval echo configure:3949: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
+if { (eval echo configure:3952: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
   rm -rf conftest*
   eval "ac_cv_lib_$ac_lib_var=yes"
 else
@@ -3975,7 +3978,7 @@ fi
 
 	else
 	    echo $ac_n "checking for deflate in -lz""... $ac_c" 1>&6
-echo "configure:3979: checking for deflate in -lz" >&5
+echo "configure:3982: checking for deflate in -lz" >&5
 ac_lib_var=`echo z'_'deflate | sed 'y%./+-%__p_%'`
 if eval "test \"`echo '$''{'ac_cv_lib_$ac_lib_var'+set}'`\" = set"; then
   echo $ac_n "(cached) $ac_c" 1>&6
@@ -3983,7 +3986,7 @@ else
   ac_save_LIBS="$LIBS"
 LIBS="-lz  $LIBS"
 cat > conftest.$ac_ext <<EOF
-#line 3987 "configure"
+#line 3990 "configure"
 #include "confdefs.h"
 /* Override any gcc2 internal prototype to avoid an error.  */
 /* We use char because int might match the return type of a gcc2
@@ -3994,7 +3997,7 @@ int main() {
 deflate()
 ; return 0; }
 EOF
-if { (eval echo configure:3998: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
+if { (eval echo configure:4001: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
   rm -rf conftest*
   eval "ac_cv_lib_$ac_lib_var=yes"
 else
@@ -4023,7 +4026,7 @@ unset H5TOH4 TESTH5TOH4
 fi
 
 	    echo $ac_n "checking for jpeg_start_compress in -ljpeg""... $ac_c" 1>&6
-echo "configure:4027: checking for jpeg_start_compress in -ljpeg" >&5
+echo "configure:4030: checking for jpeg_start_compress in -ljpeg" >&5
 ac_lib_var=`echo jpeg'_'jpeg_start_compress | sed 'y%./+-%__p_%'`
 if eval "test \"`echo '$''{'ac_cv_lib_$ac_lib_var'+set}'`\" = set"; then
   echo $ac_n "(cached) $ac_c" 1>&6
@@ -4031,7 +4034,7 @@ else
   ac_save_LIBS="$LIBS"
 LIBS="-ljpeg  $LIBS"
 cat > conftest.$ac_ext <<EOF
-#line 4035 "configure"
+#line 4038 "configure"
 #include "confdefs.h"
 /* Override any gcc2 internal prototype to avoid an error.  */
 /* We use char because int might match the return type of a gcc2
@@ -4042,7 +4045,7 @@ int main() {
 jpeg_start_compress()
 ; return 0; }
 EOF
-if { (eval echo configure:4046: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
+if { (eval echo configure:4049: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
   rm -rf conftest*
   eval "ac_cv_lib_$ac_lib_var=yes"
 else
@@ -4071,7 +4074,7 @@ unset H5TOH4 TESTH5TOH4
 fi
 
 	    echo $ac_n "checking for Hstartaccess in -ldf""... $ac_c" 1>&6
-echo "configure:4075: checking for Hstartaccess in -ldf" >&5
+echo "configure:4078: checking for Hstartaccess in -ldf" >&5
 ac_lib_var=`echo df'_'Hstartaccess | sed 'y%./+-%__p_%'`
 if eval "test \"`echo '$''{'ac_cv_lib_$ac_lib_var'+set}'`\" = set"; then
   echo $ac_n "(cached) $ac_c" 1>&6
@@ -4079,7 +4082,7 @@ else
   ac_save_LIBS="$LIBS"
 LIBS="-ldf  $LIBS"
 cat > conftest.$ac_ext <<EOF
-#line 4083 "configure"
+#line 4086 "configure"
 #include "confdefs.h"
 /* Override any gcc2 internal prototype to avoid an error.  */
 /* We use char because int might match the return type of a gcc2
@@ -4090,7 +4093,7 @@ int main() {
 Hstartaccess()
 ; return 0; }
 EOF
-if { (eval echo configure:4094: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
+if { (eval echo configure:4097: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
   rm -rf conftest*
   eval "ac_cv_lib_$ac_lib_var=yes"
 else
@@ -4118,7 +4121,7 @@ else
 fi
 
 	    echo $ac_n "checking for SDstart in -lmfhdf""... $ac_c" 1>&6
-echo "configure:4122: checking for SDstart in -lmfhdf" >&5
+echo "configure:4125: checking for SDstart in -lmfhdf" >&5
 ac_lib_var=`echo mfhdf'_'SDstart | sed 'y%./+-%__p_%'`
 if eval "test \"`echo '$''{'ac_cv_lib_$ac_lib_var'+set}'`\" = set"; then
   echo $ac_n "(cached) $ac_c" 1>&6
@@ -4126,7 +4129,7 @@ else
   ac_save_LIBS="$LIBS"
 LIBS="-lmfhdf  $LIBS"
 cat > conftest.$ac_ext <<EOF
-#line 4130 "configure"
+#line 4133 "configure"
 #include "confdefs.h"
 /* Override any gcc2 internal prototype to avoid an error.  */
 /* We use char because int might match the return type of a gcc2
@@ -4137,7 +4140,7 @@ int main() {
 SDstart()
 ; return 0; }
 EOF
-if { (eval echo configure:4141: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
+if { (eval echo configure:4144: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
   rm -rf conftest*
   eval "ac_cv_lib_$ac_lib_var=yes"
 else
@@ -4183,17 +4186,17 @@ case $withval in
 do
 ac_safe=`echo "$ac_hdr" | sed 'y%./+-%__p_%'`
 echo $ac_n "checking for $ac_hdr""... $ac_c" 1>&6
-echo "configure:4187: checking for $ac_hdr" >&5
+echo "configure:4190: checking for $ac_hdr" >&5
 if eval "test \"`echo '$''{'ac_cv_header_$ac_safe'+set}'`\" = set"; then
   echo $ac_n "(cached) $ac_c" 1>&6
 else
   cat > conftest.$ac_ext <<EOF
-#line 4192 "configure"
+#line 4195 "configure"
 #include "confdefs.h"
 #include <$ac_hdr>
 EOF
 ac_try="$ac_cpp conftest.$ac_ext >/dev/null 2>conftest.out"
-{ (eval echo configure:4197: \"$ac_try\") 1>&5; (eval $ac_try) 2>&5; }
+{ (eval echo configure:4200: \"$ac_try\") 1>&5; (eval $ac_try) 2>&5; }
 ac_err=`grep -v '^ *+' conftest.out`
 if test -z "$ac_err"; then
   rm -rf conftest*
@@ -4220,7 +4223,7 @@ fi
 done
 
 	echo $ac_n "checking for compress in -lz""... $ac_c" 1>&6
-echo "configure:4224: checking for compress in -lz" >&5
+echo "configure:4227: checking for compress in -lz" >&5
 ac_lib_var=`echo z'_'compress | sed 'y%./+-%__p_%'`
 if eval "test \"`echo '$''{'ac_cv_lib_$ac_lib_var'+set}'`\" = set"; then
   echo $ac_n "(cached) $ac_c" 1>&6
@@ -4228,7 +4231,7 @@ else
   ac_save_LIBS="$LIBS"
 LIBS="-lz  $LIBS"
 cat > conftest.$ac_ext <<EOF
-#line 4232 "configure"
+#line 4235 "configure"
 #include "confdefs.h"
 /* Override any gcc2 internal prototype to avoid an error.  */
 /* We use char because int might match the return type of a gcc2
@@ -4239,7 +4242,7 @@ int main() {
 compress()
 ; return 0; }
 EOF
-if { (eval echo configure:4243: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
+if { (eval echo configure:4246: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
   rm -rf conftest*
   eval "ac_cv_lib_$ac_lib_var=yes"
 else
@@ -4269,7 +4272,7 @@ fi
 	;;
     no)
 	echo $ac_n "checking for GNU zlib""... $ac_c" 1>&6
-echo "configure:4273: checking for GNU zlib" >&5
+echo "configure:4276: checking for GNU zlib" >&5
 	echo "$ac_t""suppressed" 1>&6
 	;;
     *)
@@ -4281,17 +4284,17 @@ echo "configure:4273: checking for GNU zlib" >&5
 do
 ac_safe=`echo "$ac_hdr" | sed 'y%./+-%__p_%'`
 echo $ac_n "checking for $ac_hdr""... $ac_c" 1>&6
-echo "configure:4285: checking for $ac_hdr" >&5
+echo "configure:4288: checking for $ac_hdr" >&5
 if eval "test \"`echo '$''{'ac_cv_header_$ac_safe'+set}'`\" = set"; then
   echo $ac_n "(cached) $ac_c" 1>&6
 else
   cat > conftest.$ac_ext <<EOF
-#line 4290 "configure"
+#line 4293 "configure"
 #include "confdefs.h"
 #include <$ac_hdr>
 EOF
 ac_try="$ac_cpp conftest.$ac_ext >/dev/null 2>conftest.out"
-{ (eval echo configure:4295: \"$ac_try\") 1>&5; (eval $ac_try) 2>&5; }
+{ (eval echo configure:4298: \"$ac_try\") 1>&5; (eval $ac_try) 2>&5; }
 ac_err=`grep -v '^ *+' conftest.out`
 if test -z "$ac_err"; then
   rm -rf conftest*
@@ -4323,17 +4326,17 @@ done
 do
 ac_safe=`echo "$ac_hdr" | sed 'y%./+-%__p_%'`
 echo $ac_n "checking for $ac_hdr""... $ac_c" 1>&6
-echo "configure:4327: checking for $ac_hdr" >&5
+echo "configure:4330: checking for $ac_hdr" >&5
 if eval "test \"`echo '$''{'ac_cv_header_$ac_safe'+set}'`\" = set"; then
   echo $ac_n "(cached) $ac_c" 1>&6
 else
   cat > conftest.$ac_ext <<EOF
-#line 4332 "configure"
+#line 4335 "configure"
 #include "confdefs.h"
 #include <$ac_hdr>
 EOF
 ac_try="$ac_cpp conftest.$ac_ext >/dev/null 2>conftest.out"
-{ (eval echo configure:4337: \"$ac_try\") 1>&5; (eval $ac_try) 2>&5; }
+{ (eval echo configure:4340: \"$ac_try\") 1>&5; (eval $ac_try) 2>&5; }
 ac_err=`grep -v '^ *+' conftest.out`
 if test -z "$ac_err"; then
   rm -rf conftest*
@@ -4366,7 +4369,7 @@ done
 	    saved_LDFLAGS="$LDFLAGS"
 	    LDFLAGS="$LDFLAGS -L$zlib_lib"
 	    echo $ac_n "checking for compress in -lz""... $ac_c" 1>&6
-echo "configure:4370: checking for compress in -lz" >&5
+echo "configure:4373: checking for compress in -lz" >&5
 ac_lib_var=`echo z'_'compress | sed 'y%./+-%__p_%'`
 if eval "test \"`echo '$''{'ac_cv_lib_$ac_lib_var'+set}'`\" = set"; then
   echo $ac_n "(cached) $ac_c" 1>&6
@@ -4374,7 +4377,7 @@ else
   ac_save_LIBS="$LIBS"
 LIBS="-lz  $LIBS"
 cat > conftest.$ac_ext <<EOF
-#line 4378 "configure"
+#line 4381 "configure"
 #include "confdefs.h"
 /* Override any gcc2 internal prototype to avoid an error.  */
 /* We use char because int might match the return type of a gcc2
@@ -4385,7 +4388,7 @@ int main() {
 compress()
 ; return 0; }
 EOF
-if { (eval echo configure:4389: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
+if { (eval echo configure:4392: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
   rm -rf conftest*
   eval "ac_cv_lib_$ac_lib_var=yes"
 else
@@ -4415,7 +4418,7 @@ fi
 
 	else
 	    echo $ac_n "checking for compress in -lz""... $ac_c" 1>&6
-echo "configure:4419: checking for compress in -lz" >&5
+echo "configure:4422: checking for compress in -lz" >&5
 ac_lib_var=`echo z'_'compress | sed 'y%./+-%__p_%'`
 if eval "test \"`echo '$''{'ac_cv_lib_$ac_lib_var'+set}'`\" = set"; then
   echo $ac_n "(cached) $ac_c" 1>&6
@@ -4423,7 +4426,7 @@ else
   ac_save_LIBS="$LIBS"
 LIBS="-lz  $LIBS"
 cat > conftest.$ac_ext <<EOF
-#line 4427 "configure"
+#line 4430 "configure"
 #include "confdefs.h"
 /* Override any gcc2 internal prototype to avoid an error.  */
 /* We use char because int might match the return type of a gcc2
@@ -4434,7 +4437,7 @@ int main() {
 compress()
 ; return 0; }
 EOF
-if { (eval echo configure:4438: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
+if { (eval echo configure:4441: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
   rm -rf conftest*
   eval "ac_cv_lib_$ac_lib_var=yes"
 else
@@ -4484,17 +4487,17 @@ case $withval in
 do
 ac_safe=`echo "$ac_hdr" | sed 'y%./+-%__p_%'`
 echo $ac_n "checking for $ac_hdr""... $ac_c" 1>&6
-echo "configure:4488: checking for $ac_hdr" >&5
+echo "configure:4491: checking for $ac_hdr" >&5
 if eval "test \"`echo '$''{'ac_cv_header_$ac_safe'+set}'`\" = set"; then
   echo $ac_n "(cached) $ac_c" 1>&6
 else
   cat > conftest.$ac_ext <<EOF
-#line 4493 "configure"
+#line 4496 "configure"
 #include "confdefs.h"
 #include <$ac_hdr>
 EOF
 ac_try="$ac_cpp conftest.$ac_ext >/dev/null 2>conftest.out"
-{ (eval echo configure:4498: \"$ac_try\") 1>&5; (eval $ac_try) 2>&5; }
+{ (eval echo configure:4501: \"$ac_try\") 1>&5; (eval $ac_try) 2>&5; }
 ac_err=`grep -v '^ *+' conftest.out`
 if test -z "$ac_err"; then
   rm -rf conftest*
@@ -4522,7 +4525,7 @@ fi
 done
 
 	echo $ac_n "checking for main in -lxnet""... $ac_c" 1>&6
-echo "configure:4526: checking for main in -lxnet" >&5
+echo "configure:4529: checking for main in -lxnet" >&5
 ac_lib_var=`echo xnet'_'main | sed 'y%./+-%__p_%'`
 if eval "test \"`echo '$''{'ac_cv_lib_$ac_lib_var'+set}'`\" = set"; then
   echo $ac_n "(cached) $ac_c" 1>&6
@@ -4530,14 +4533,14 @@ else
   ac_save_LIBS="$LIBS"
 LIBS="-lxnet  $LIBS"
 cat > conftest.$ac_ext <<EOF
-#line 4534 "configure"
+#line 4537 "configure"
 #include "confdefs.h"
 
 int main() {
 main()
 ; return 0; }
 EOF
-if { (eval echo configure:4541: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
+if { (eval echo configure:4544: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
   rm -rf conftest*
   eval "ac_cv_lib_$ac_lib_var=yes"
 else
@@ -4566,7 +4569,7 @@ unset GASS TESTGASS
 fi
 
 	echo $ac_n "checking for globus_module_activate in -lglobus_common""... $ac_c" 1>&6
-echo "configure:4570: checking for globus_module_activate in -lglobus_common" >&5
+echo "configure:4573: checking for globus_module_activate in -lglobus_common" >&5
 ac_lib_var=`echo globus_common'_'globus_module_activate | sed 'y%./+-%__p_%'`
 if eval "test \"`echo '$''{'ac_cv_lib_$ac_lib_var'+set}'`\" = set"; then
   echo $ac_n "(cached) $ac_c" 1>&6
@@ -4574,7 +4577,7 @@ else
   ac_save_LIBS="$LIBS"
 LIBS="-lglobus_common  $LIBS"
 cat > conftest.$ac_ext <<EOF
-#line 4578 "configure"
+#line 4581 "configure"
 #include "confdefs.h"
 /* Override any gcc2 internal prototype to avoid an error.  */
 /* We use char because int might match the return type of a gcc2
@@ -4585,7 +4588,7 @@ int main() {
 globus_module_activate()
 ; return 0; }
 EOF
-if { (eval echo configure:4589: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
+if { (eval echo configure:4592: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
   rm -rf conftest*
   eval "ac_cv_lib_$ac_lib_var=yes"
 else
@@ -4614,7 +4617,7 @@ unset GASS TESTGASS
 fi
 
 	echo $ac_n "checking for main in -lglobus_dc""... $ac_c" 1>&6
-echo "configure:4618: checking for main in -lglobus_dc" >&5
+echo "configure:4621: checking for main in -lglobus_dc" >&5
 ac_lib_var=`echo globus_dc'_'main | sed 'y%./+-%__p_%'`
 if eval "test \"`echo '$''{'ac_cv_lib_$ac_lib_var'+set}'`\" = set"; then
   echo $ac_n "(cached) $ac_c" 1>&6
@@ -4622,14 +4625,14 @@ else
   ac_save_LIBS="$LIBS"
 LIBS="-lglobus_dc  $LIBS"
 cat > conftest.$ac_ext <<EOF
-#line 4626 "configure"
+#line 4629 "configure"
 #include "confdefs.h"
 
 int main() {
 main()
 ; return 0; }
 EOF
-if { (eval echo configure:4633: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
+if { (eval echo configure:4636: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
   rm -rf conftest*
   eval "ac_cv_lib_$ac_lib_var=yes"
 else
@@ -4658,7 +4661,7 @@ unset GASS TESTGASS
 fi
 
 	echo $ac_n "checking for main in -lglobus_nexus""... $ac_c" 1>&6
-echo "configure:4662: checking for main in -lglobus_nexus" >&5
+echo "configure:4665: checking for main in -lglobus_nexus" >&5
 ac_lib_var=`echo globus_nexus'_'main | sed 'y%./+-%__p_%'`
 if eval "test \"`echo '$''{'ac_cv_lib_$ac_lib_var'+set}'`\" = set"; then
   echo $ac_n "(cached) $ac_c" 1>&6
@@ -4666,14 +4669,14 @@ else
   ac_save_LIBS="$LIBS"
 LIBS="-lglobus_nexus  $LIBS"
 cat > conftest.$ac_ext <<EOF
-#line 4670 "configure"
+#line 4673 "configure"
 #include "confdefs.h"
 
 int main() {
 main()
 ; return 0; }
 EOF
-if { (eval echo configure:4677: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
+if { (eval echo configure:4680: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
   rm -rf conftest*
   eval "ac_cv_lib_$ac_lib_var=yes"
 else
@@ -4702,7 +4705,7 @@ unset GASS TESTGASS
 fi
 
 	echo $ac_n "checking for main in -lglobus_gass_client""... $ac_c" 1>&6
-echo "configure:4706: checking for main in -lglobus_gass_client" >&5
+echo "configure:4709: checking for main in -lglobus_gass_client" >&5
 ac_lib_var=`echo globus_gass_client'_'main | sed 'y%./+-%__p_%'`
 if eval "test \"`echo '$''{'ac_cv_lib_$ac_lib_var'+set}'`\" = set"; then
   echo $ac_n "(cached) $ac_c" 1>&6
@@ -4710,14 +4713,14 @@ else
   ac_save_LIBS="$LIBS"
 LIBS="-lglobus_gass_client  $LIBS"
 cat > conftest.$ac_ext <<EOF
-#line 4714 "configure"
+#line 4717 "configure"
 #include "confdefs.h"
 
 int main() {
 main()
 ; return 0; }
 EOF
-if { (eval echo configure:4721: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
+if { (eval echo configure:4724: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
   rm -rf conftest*
   eval "ac_cv_lib_$ac_lib_var=yes"
 else
@@ -4746,7 +4749,7 @@ unset GASS TESTGASS
 fi
 
 	echo $ac_n "checking for main in -lglobus_gass_cache""... $ac_c" 1>&6
-echo "configure:4750: checking for main in -lglobus_gass_cache" >&5
+echo "configure:4753: checking for main in -lglobus_gass_cache" >&5
 ac_lib_var=`echo globus_gass_cache'_'main | sed 'y%./+-%__p_%'`
 if eval "test \"`echo '$''{'ac_cv_lib_$ac_lib_var'+set}'`\" = set"; then
   echo $ac_n "(cached) $ac_c" 1>&6
@@ -4754,14 +4757,14 @@ else
   ac_save_LIBS="$LIBS"
 LIBS="-lglobus_gass_cache  $LIBS"
 cat > conftest.$ac_ext <<EOF
-#line 4758 "configure"
+#line 4761 "configure"
 #include "confdefs.h"
 
 int main() {
 main()
 ; return 0; }
 EOF
-if { (eval echo configure:4765: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
+if { (eval echo configure:4768: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
   rm -rf conftest*
   eval "ac_cv_lib_$ac_lib_var=yes"
 else
@@ -4790,7 +4793,7 @@ unset GASS TESTGASS
 fi
 
 	echo $ac_n "checking for globus_gass_open in -lglobus_gass_file""... $ac_c" 1>&6
-echo "configure:4794: checking for globus_gass_open in -lglobus_gass_file" >&5
+echo "configure:4797: checking for globus_gass_open in -lglobus_gass_file" >&5
 ac_lib_var=`echo globus_gass_file'_'globus_gass_open | sed 'y%./+-%__p_%'`
 if eval "test \"`echo '$''{'ac_cv_lib_$ac_lib_var'+set}'`\" = set"; then
   echo $ac_n "(cached) $ac_c" 1>&6
@@ -4798,7 +4801,7 @@ else
   ac_save_LIBS="$LIBS"
 LIBS="-lglobus_gass_file  $LIBS"
 cat > conftest.$ac_ext <<EOF
-#line 4802 "configure"
+#line 4805 "configure"
 #include "confdefs.h"
 /* Override any gcc2 internal prototype to avoid an error.  */
 /* We use char because int might match the return type of a gcc2
@@ -4809,7 +4812,7 @@ int main() {
 globus_gass_open()
 ; return 0; }
 EOF
-if { (eval echo configure:4813: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
+if { (eval echo configure:4816: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
   rm -rf conftest*
   eval "ac_cv_lib_$ac_lib_var=yes"
 else
@@ -4840,7 +4843,7 @@ fi
 	;;
     no)
 	echo $ac_n "checking for GASS""... $ac_c" 1>&6
-echo "configure:4844: checking for GASS" >&5
+echo "configure:4847: checking for GASS" >&5
 	echo "$ac_t""suppressed" 1>&6
 	unset GASS TESTGASS
 	;;
@@ -4853,17 +4856,17 @@ echo "configure:4844: checking for GASS" >&5
 do
 ac_safe=`echo "$ac_hdr" | sed 'y%./+-%__p_%'`
 echo $ac_n "checking for $ac_hdr""... $ac_c" 1>&6
-echo "configure:4857: checking for $ac_hdr" >&5
+echo "configure:4860: checking for $ac_hdr" >&5
 if eval "test \"`echo '$''{'ac_cv_header_$ac_safe'+set}'`\" = set"; then
   echo $ac_n "(cached) $ac_c" 1>&6
 else
   cat > conftest.$ac_ext <<EOF
-#line 4862 "configure"
+#line 4865 "configure"
 #include "confdefs.h"
 #include <$ac_hdr>
 EOF
 ac_try="$ac_cpp conftest.$ac_ext >/dev/null 2>conftest.out"
-{ (eval echo configure:4867: \"$ac_try\") 1>&5; (eval $ac_try) 2>&5; }
+{ (eval echo configure:4870: \"$ac_try\") 1>&5; (eval $ac_try) 2>&5; }
 ac_err=`grep -v '^ *+' conftest.out`
 if test -z "$ac_err"; then
   rm -rf conftest*
@@ -4897,17 +4900,17 @@ done
 do
 ac_safe=`echo "$ac_hdr" | sed 'y%./+-%__p_%'`
 echo $ac_n "checking for $ac_hdr""... $ac_c" 1>&6
-echo "configure:4901: checking for $ac_hdr" >&5
+echo "configure:4904: checking for $ac_hdr" >&5
 if eval "test \"`echo '$''{'ac_cv_header_$ac_safe'+set}'`\" = set"; then
   echo $ac_n "(cached) $ac_c" 1>&6
 else
   cat > conftest.$ac_ext <<EOF
-#line 4906 "configure"
+#line 4909 "configure"
 #include "confdefs.h"
 #include <$ac_hdr>
 EOF
 ac_try="$ac_cpp conftest.$ac_ext >/dev/null 2>conftest.out"
-{ (eval echo configure:4911: \"$ac_try\") 1>&5; (eval $ac_try) 2>&5; }
+{ (eval echo configure:4914: \"$ac_try\") 1>&5; (eval $ac_try) 2>&5; }
 ac_err=`grep -v '^ *+' conftest.out`
 if test -z "$ac_err"; then
   rm -rf conftest*
@@ -4940,7 +4943,7 @@ done
 	    saved_LDFLAGS="$LDFLAGS"
 	    LDFLAGS="$LDFLAGS -L$gass_lib"
 	    echo $ac_n "checking for main in -lxnet""... $ac_c" 1>&6
-echo "configure:4944: checking for main in -lxnet" >&5
+echo "configure:4947: checking for main in -lxnet" >&5
 ac_lib_var=`echo xnet'_'main | sed 'y%./+-%__p_%'`
 if eval "test \"`echo '$''{'ac_cv_lib_$ac_lib_var'+set}'`\" = set"; then
   echo $ac_n "(cached) $ac_c" 1>&6
@@ -4948,14 +4951,14 @@ else
   ac_save_LIBS="$LIBS"
 LIBS="-lxnet  $LIBS"
 cat > conftest.$ac_ext <<EOF
-#line 4952 "configure"
+#line 4955 "configure"
 #include "confdefs.h"
 
 int main() {
 main()
 ; return 0; }
 EOF
-if { (eval echo configure:4959: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
+if { (eval echo configure:4962: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
   rm -rf conftest*
   eval "ac_cv_lib_$ac_lib_var=yes"
 else
@@ -4984,7 +4987,7 @@ unset GASS TESTGASS
 fi
 
 	    echo $ac_n "checking for globus_module_activate in -lglobus_common""... $ac_c" 1>&6
-echo "configure:4988: checking for globus_module_activate in -lglobus_common" >&5
+echo "configure:4991: checking for globus_module_activate in -lglobus_common" >&5
 ac_lib_var=`echo globus_common'_'globus_module_activate | sed 'y%./+-%__p_%'`
 if eval "test \"`echo '$''{'ac_cv_lib_$ac_lib_var'+set}'`\" = set"; then
   echo $ac_n "(cached) $ac_c" 1>&6
@@ -4992,7 +4995,7 @@ else
   ac_save_LIBS="$LIBS"
 LIBS="-lglobus_common  $LIBS"
 cat > conftest.$ac_ext <<EOF
-#line 4996 "configure"
+#line 4999 "configure"
 #include "confdefs.h"
 /* Override any gcc2 internal prototype to avoid an error.  */
 /* We use char because int might match the return type of a gcc2
@@ -5003,7 +5006,7 @@ int main() {
 globus_module_activate()
 ; return 0; }
 EOF
-if { (eval echo configure:5007: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
+if { (eval echo configure:5010: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
   rm -rf conftest*
   eval "ac_cv_lib_$ac_lib_var=yes"
 else
@@ -5032,7 +5035,7 @@ unset GASS TESTGASS
 fi
 
 	    echo $ac_n "checking for main in -lglobus_dc""... $ac_c" 1>&6
-echo "configure:5036: checking for main in -lglobus_dc" >&5
+echo "configure:5039: checking for main in -lglobus_dc" >&5
 ac_lib_var=`echo globus_dc'_'main | sed 'y%./+-%__p_%'`
 if eval "test \"`echo '$''{'ac_cv_lib_$ac_lib_var'+set}'`\" = set"; then
   echo $ac_n "(cached) $ac_c" 1>&6
@@ -5040,14 +5043,14 @@ else
   ac_save_LIBS="$LIBS"
 LIBS="-lglobus_dc  $LIBS"
 cat > conftest.$ac_ext <<EOF
-#line 5044 "configure"
+#line 5047 "configure"
 #include "confdefs.h"
 
 int main() {
 main()
 ; return 0; }
 EOF
-if { (eval echo configure:5051: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
+if { (eval echo configure:5054: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
   rm -rf conftest*
   eval "ac_cv_lib_$ac_lib_var=yes"
 else
@@ -5076,7 +5079,7 @@ unset GASS TESTGASS
 fi
 
 	    echo $ac_n "checking for main in -lglobus_nexus""... $ac_c" 1>&6
-echo "configure:5080: checking for main in -lglobus_nexus" >&5
+echo "configure:5083: checking for main in -lglobus_nexus" >&5
 ac_lib_var=`echo globus_nexus'_'main | sed 'y%./+-%__p_%'`
 if eval "test \"`echo '$''{'ac_cv_lib_$ac_lib_var'+set}'`\" = set"; then
   echo $ac_n "(cached) $ac_c" 1>&6
@@ -5084,14 +5087,14 @@ else
   ac_save_LIBS="$LIBS"
 LIBS="-lglobus_nexus  $LIBS"
 cat > conftest.$ac_ext <<EOF
-#line 5088 "configure"
+#line 5091 "configure"
 #include "confdefs.h"
 
 int main() {
 main()
 ; return 0; }
 EOF
-if { (eval echo configure:5095: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
+if { (eval echo configure:5098: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
   rm -rf conftest*
   eval "ac_cv_lib_$ac_lib_var=yes"
 else
@@ -5120,7 +5123,7 @@ unset GASS TESTGASS
 fi
 
 	    echo $ac_n "checking for main in -lglobus_gass_client""... $ac_c" 1>&6
-echo "configure:5124: checking for main in -lglobus_gass_client" >&5
+echo "configure:5127: checking for main in -lglobus_gass_client" >&5
 ac_lib_var=`echo globus_gass_client'_'main | sed 'y%./+-%__p_%'`
 if eval "test \"`echo '$''{'ac_cv_lib_$ac_lib_var'+set}'`\" = set"; then
   echo $ac_n "(cached) $ac_c" 1>&6
@@ -5128,14 +5131,14 @@ else
   ac_save_LIBS="$LIBS"
 LIBS="-lglobus_gass_client  $LIBS"
 cat > conftest.$ac_ext <<EOF
-#line 5132 "configure"
+#line 5135 "configure"
 #include "confdefs.h"
 
 int main() {
 main()
 ; return 0; }
 EOF
-if { (eval echo configure:5139: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
+if { (eval echo configure:5142: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
   rm -rf conftest*
   eval "ac_cv_lib_$ac_lib_var=yes"
 else
@@ -5164,7 +5167,7 @@ unset GASS TESTGASS
 fi
 
 	    echo $ac_n "checking for main in -lglobus_gass_cache""... $ac_c" 1>&6
-echo "configure:5168: checking for main in -lglobus_gass_cache" >&5
+echo "configure:5171: checking for main in -lglobus_gass_cache" >&5
 ac_lib_var=`echo globus_gass_cache'_'main | sed 'y%./+-%__p_%'`
 if eval "test \"`echo '$''{'ac_cv_lib_$ac_lib_var'+set}'`\" = set"; then
   echo $ac_n "(cached) $ac_c" 1>&6
@@ -5172,14 +5175,14 @@ else
   ac_save_LIBS="$LIBS"
 LIBS="-lglobus_gass_cache  $LIBS"
 cat > conftest.$ac_ext <<EOF
-#line 5176 "configure"
+#line 5179 "configure"
 #include "confdefs.h"
 
 int main() {
 main()
 ; return 0; }
 EOF
-if { (eval echo configure:5183: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
+if { (eval echo configure:5186: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
   rm -rf conftest*
   eval "ac_cv_lib_$ac_lib_var=yes"
 else
@@ -5208,7 +5211,7 @@ unset GASS TESTGASS
 fi
 
 	    echo $ac_n "checking for globus_gass_open in -lglobus_gass_file""... $ac_c" 1>&6
-echo "configure:5212: checking for globus_gass_open in -lglobus_gass_file" >&5
+echo "configure:5215: checking for globus_gass_open in -lglobus_gass_file" >&5
 ac_lib_var=`echo globus_gass_file'_'globus_gass_open | sed 'y%./+-%__p_%'`
 if eval "test \"`echo '$''{'ac_cv_lib_$ac_lib_var'+set}'`\" = set"; then
   echo $ac_n "(cached) $ac_c" 1>&6
@@ -5216,7 +5219,7 @@ else
   ac_save_LIBS="$LIBS"
 LIBS="-lglobus_gass_file  $LIBS"
 cat > conftest.$ac_ext <<EOF
-#line 5220 "configure"
+#line 5223 "configure"
 #include "confdefs.h"
 /* Override any gcc2 internal prototype to avoid an error.  */
 /* We use char because int might match the return type of a gcc2
@@ -5227,7 +5230,7 @@ int main() {
 globus_gass_open()
 ; return 0; }
 EOF
-if { (eval echo configure:5231: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
+if { (eval echo configure:5234: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
   rm -rf conftest*
   eval "ac_cv_lib_$ac_lib_var=yes"
 else
@@ -5257,7 +5260,7 @@ fi
 
 	else
 	    echo $ac_n "checking for main in -lxnet""... $ac_c" 1>&6
-echo "configure:5261: checking for main in -lxnet" >&5
+echo "configure:5264: checking for main in -lxnet" >&5
 ac_lib_var=`echo xnet'_'main | sed 'y%./+-%__p_%'`
 if eval "test \"`echo '$''{'ac_cv_lib_$ac_lib_var'+set}'`\" = set"; then
   echo $ac_n "(cached) $ac_c" 1>&6
@@ -5265,14 +5268,14 @@ else
   ac_save_LIBS="$LIBS"
 LIBS="-lxnet  $LIBS"
 cat > conftest.$ac_ext <<EOF
-#line 5269 "configure"
+#line 5272 "configure"
 #include "confdefs.h"
 
 int main() {
 main()
 ; return 0; }
 EOF
-if { (eval echo configure:5276: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
+if { (eval echo configure:5279: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
   rm -rf conftest*
   eval "ac_cv_lib_$ac_lib_var=yes"
 else
@@ -5301,7 +5304,7 @@ unset GASS TESTGASS
 fi
 
 	    echo $ac_n "checking for globus_module_activate in -lglobus_common""... $ac_c" 1>&6
-echo "configure:5305: checking for globus_module_activate in -lglobus_common" >&5
+echo "configure:5308: checking for globus_module_activate in -lglobus_common" >&5
 ac_lib_var=`echo globus_common'_'globus_module_activate | sed 'y%./+-%__p_%'`
 if eval "test \"`echo '$''{'ac_cv_lib_$ac_lib_var'+set}'`\" = set"; then
   echo $ac_n "(cached) $ac_c" 1>&6
@@ -5309,7 +5312,7 @@ else
   ac_save_LIBS="$LIBS"
 LIBS="-lglobus_common  $LIBS"
 cat > conftest.$ac_ext <<EOF
-#line 5313 "configure"
+#line 5316 "configure"
 #include "confdefs.h"
 /* Override any gcc2 internal prototype to avoid an error.  */
 /* We use char because int might match the return type of a gcc2
@@ -5320,7 +5323,7 @@ int main() {
 globus_module_activate()
 ; return 0; }
 EOF
-if { (eval echo configure:5324: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
+if { (eval echo configure:5327: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
   rm -rf conftest*
   eval "ac_cv_lib_$ac_lib_var=yes"
 else
@@ -5349,7 +5352,7 @@ unset GASS TESTGASS
 fi
 
 	    echo $ac_n "checking for main in -lglobus_dc""... $ac_c" 1>&6
-echo "configure:5353: checking for main in -lglobus_dc" >&5
+echo "configure:5356: checking for main in -lglobus_dc" >&5
 ac_lib_var=`echo globus_dc'_'main | sed 'y%./+-%__p_%'`
 if eval "test \"`echo '$''{'ac_cv_lib_$ac_lib_var'+set}'`\" = set"; then
   echo $ac_n "(cached) $ac_c" 1>&6
@@ -5357,14 +5360,14 @@ else
   ac_save_LIBS="$LIBS"
 LIBS="-lglobus_dc  $LIBS"
 cat > conftest.$ac_ext <<EOF
-#line 5361 "configure"
+#line 5364 "configure"
 #include "confdefs.h"
 
 int main() {
 main()
 ; return 0; }
 EOF
-if { (eval echo configure:5368: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
+if { (eval echo configure:5371: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
   rm -rf conftest*
   eval "ac_cv_lib_$ac_lib_var=yes"
 else
@@ -5393,7 +5396,7 @@ unset GASS TESTGASS
 fi
 
 	    echo $ac_n "checking for main in -lglobus_nexus""... $ac_c" 1>&6
-echo "configure:5397: checking for main in -lglobus_nexus" >&5
+echo "configure:5400: checking for main in -lglobus_nexus" >&5
 ac_lib_var=`echo globus_nexus'_'main | sed 'y%./+-%__p_%'`
 if eval "test \"`echo '$''{'ac_cv_lib_$ac_lib_var'+set}'`\" = set"; then
   echo $ac_n "(cached) $ac_c" 1>&6
@@ -5401,14 +5404,14 @@ else
   ac_save_LIBS="$LIBS"
 LIBS="-lglobus_nexus  $LIBS"
 cat > conftest.$ac_ext <<EOF
-#line 5405 "configure"
+#line 5408 "configure"
 #include "confdefs.h"
 
 int main() {
 main()
 ; return 0; }
 EOF
-if { (eval echo configure:5412: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
+if { (eval echo configure:5415: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
   rm -rf conftest*
   eval "ac_cv_lib_$ac_lib_var=yes"
 else
@@ -5437,7 +5440,7 @@ unset GASS TESTGASS
 fi
 
 	    echo $ac_n "checking for main in -lglobus_gass_client""... $ac_c" 1>&6
-echo "configure:5441: checking for main in -lglobus_gass_client" >&5
+echo "configure:5444: checking for main in -lglobus_gass_client" >&5
 ac_lib_var=`echo globus_gass_client'_'main | sed 'y%./+-%__p_%'`
 if eval "test \"`echo '$''{'ac_cv_lib_$ac_lib_var'+set}'`\" = set"; then
   echo $ac_n "(cached) $ac_c" 1>&6
@@ -5445,14 +5448,14 @@ else
   ac_save_LIBS="$LIBS"
 LIBS="-lglobus_gass_client  $LIBS"
 cat > conftest.$ac_ext <<EOF
-#line 5449 "configure"
+#line 5452 "configure"
 #include "confdefs.h"
 
 int main() {
 main()
 ; return 0; }
 EOF
-if { (eval echo configure:5456: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
+if { (eval echo configure:5459: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
   rm -rf conftest*
   eval "ac_cv_lib_$ac_lib_var=yes"
 else
@@ -5481,7 +5484,7 @@ unset GASS TESTGASS
 fi
 
 	    echo $ac_n "checking for main in -lglobus_gass_cache""... $ac_c" 1>&6
-echo "configure:5485: checking for main in -lglobus_gass_cache" >&5
+echo "configure:5488: checking for main in -lglobus_gass_cache" >&5
 ac_lib_var=`echo globus_gass_cache'_'main | sed 'y%./+-%__p_%'`
 if eval "test \"`echo '$''{'ac_cv_lib_$ac_lib_var'+set}'`\" = set"; then
   echo $ac_n "(cached) $ac_c" 1>&6
@@ -5489,14 +5492,14 @@ else
   ac_save_LIBS="$LIBS"
 LIBS="-lglobus_gass_cache  $LIBS"
 cat > conftest.$ac_ext <<EOF
-#line 5493 "configure"
+#line 5496 "configure"
 #include "confdefs.h"
 
 int main() {
 main()
 ; return 0; }
 EOF
-if { (eval echo configure:5500: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
+if { (eval echo configure:5503: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
   rm -rf conftest*
   eval "ac_cv_lib_$ac_lib_var=yes"
 else
@@ -5525,7 +5528,7 @@ unset GASS TESTGASS
 fi
 
 	    echo $ac_n "checking for globus_gass_open in -lglobus_gass_file""... $ac_c" 1>&6
-echo "configure:5529: checking for globus_gass_open in -lglobus_gass_file" >&5
+echo "configure:5532: checking for globus_gass_open in -lglobus_gass_file" >&5
 ac_lib_var=`echo globus_gass_file'_'globus_gass_open | sed 'y%./+-%__p_%'`
 if eval "test \"`echo '$''{'ac_cv_lib_$ac_lib_var'+set}'`\" = set"; then
   echo $ac_n "(cached) $ac_c" 1>&6
@@ -5533,7 +5536,7 @@ else
   ac_save_LIBS="$LIBS"
 LIBS="-lglobus_gass_file  $LIBS"
 cat > conftest.$ac_ext <<EOF
-#line 5537 "configure"
+#line 5540 "configure"
 #include "confdefs.h"
 /* Override any gcc2 internal prototype to avoid an error.  */
 /* We use char because int might match the return type of a gcc2
@@ -5544,7 +5547,7 @@ int main() {
 globus_gass_open()
 ; return 0; }
 EOF
-if { (eval echo configure:5548: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
+if { (eval echo configure:5551: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
   rm -rf conftest*
   eval "ac_cv_lib_$ac_lib_var=yes"
 else
@@ -5583,10 +5586,146 @@ EOF
 fi
 
 
+echo $ac_n "checking for PD_open in -lpdb""... $ac_c" 1>&6
+echo "configure:5591: checking for PD_open in -lpdb" >&5
+ac_lib_var=`echo pdb'_'PD_open | sed 'y%./+-%__p_%'`
+if eval "test \"`echo '$''{'ac_cv_lib_$ac_lib_var'+set}'`\" = set"; then
+  echo $ac_n "(cached) $ac_c" 1>&6
+else
+  ac_save_LIBS="$LIBS"
+LIBS="-lpdb  $LIBS"
+cat > conftest.$ac_ext <<EOF
+#line 5599 "configure"
+#include "confdefs.h"
+/* Override any gcc2 internal prototype to avoid an error.  */
+/* We use char because int might match the return type of a gcc2
+    builtin and then its argument prototype would still apply.  */
+char PD_open();
+
+int main() {
+PD_open()
+; return 0; }
+EOF
+if { (eval echo configure:5610: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
+  rm -rf conftest*
+  eval "ac_cv_lib_$ac_lib_var=yes"
+else
+  echo "configure: failed program was:" >&5
+  cat conftest.$ac_ext >&5
+  rm -rf conftest*
+  eval "ac_cv_lib_$ac_lib_var=no"
+fi
+rm -f conftest*
+LIBS="$ac_save_LIBS"
+
+fi
+if eval "test \"`echo '$ac_cv_lib_'$ac_lib_var`\" = yes"; then
+  echo "$ac_t""yes" 1>&6
+    ac_tr_lib=HAVE_LIB`echo pdb | sed -e 's/[^a-zA-Z0-9_]/_/g' \
+    -e 'y/abcdefghijklmnopqrstuvwxyz/ABCDEFGHIJKLMNOPQRSTUVWXYZ/'`
+  cat >> confdefs.h <<EOF
+#define $ac_tr_lib 1
+EOF
+
+  LIBS="-lpdb $LIBS"
+
+else
+  echo "$ac_t""no" 1>&6
+fi
+
+echo $ac_n "checking for lite_PD_open in -lsilo""... $ac_c" 1>&6
+echo "configure:5638: checking for lite_PD_open in -lsilo" >&5
+ac_lib_var=`echo silo'_'lite_PD_open | sed 'y%./+-%__p_%'`
+if eval "test \"`echo '$''{'ac_cv_lib_$ac_lib_var'+set}'`\" = set"; then
+  echo $ac_n "(cached) $ac_c" 1>&6
+else
+  ac_save_LIBS="$LIBS"
+LIBS="-lsilo  $LIBS"
+cat > conftest.$ac_ext <<EOF
+#line 5646 "configure"
+#include "confdefs.h"
+/* Override any gcc2 internal prototype to avoid an error.  */
+/* We use char because int might match the return type of a gcc2
+    builtin and then its argument prototype would still apply.  */
+char lite_PD_open();
+
+int main() {
+lite_PD_open()
+; return 0; }
+EOF
+if { (eval echo configure:5657: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
+  rm -rf conftest*
+  eval "ac_cv_lib_$ac_lib_var=yes"
+else
+  echo "configure: failed program was:" >&5
+  cat conftest.$ac_ext >&5
+  rm -rf conftest*
+  eval "ac_cv_lib_$ac_lib_var=no"
+fi
+rm -f conftest*
+LIBS="$ac_save_LIBS"
+
+fi
+if eval "test \"`echo '$ac_cv_lib_'$ac_lib_var`\" = yes"; then
+  echo "$ac_t""yes" 1>&6
+    ac_tr_lib=HAVE_LIB`echo silo | sed -e 's/[^a-zA-Z0-9_]/_/g' \
+    -e 'y/abcdefghijklmnopqrstuvwxyz/ABCDEFGHIJKLMNOPQRSTUVWXYZ/'`
+  cat >> confdefs.h <<EOF
+#define $ac_tr_lib 1
+EOF
+
+  LIBS="-lsilo $LIBS"
+
+else
+  echo "$ac_t""no" 1>&6
+fi
+
+for ac_hdr in pdb.h
+do
+ac_safe=`echo "$ac_hdr" | sed 'y%./+-%__p_%'`
+echo $ac_n "checking for $ac_hdr""... $ac_c" 1>&6
+echo "configure:5688: checking for $ac_hdr" >&5
+if eval "test \"`echo '$''{'ac_cv_header_$ac_safe'+set}'`\" = set"; then
+  echo $ac_n "(cached) $ac_c" 1>&6
+else
+  cat > conftest.$ac_ext <<EOF
+#line 5693 "configure"
+#include "confdefs.h"
+#include <$ac_hdr>
+EOF
+ac_try="$ac_cpp conftest.$ac_ext >/dev/null 2>conftest.out"
+{ (eval echo configure:5698: \"$ac_try\") 1>&5; (eval $ac_try) 2>&5; }
+ac_err=`grep -v '^ *+' conftest.out`
+if test -z "$ac_err"; then
+  rm -rf conftest*
+  eval "ac_cv_header_$ac_safe=yes"
+else
+  echo "$ac_err" >&5
+  echo "configure: failed program was:" >&5
+  cat conftest.$ac_ext >&5
+  rm -rf conftest*
+  eval "ac_cv_header_$ac_safe=no"
+fi
+rm -f conftest*
+fi
+if eval "test \"`echo '$ac_cv_header_'$ac_safe`\" = yes"; then
+  echo "$ac_t""yes" 1>&6
+    ac_tr_hdr=HAVE_`echo $ac_hdr | sed 'y%abcdefghijklmnopqrstuvwxyz./-%ABCDEFGHIJKLMNOPQRSTUVWXYZ___%'`
+  cat >> confdefs.h <<EOF
+#define $ac_tr_hdr 1
+EOF
+ PDB2HDF=pdb2hdf
+else
+  echo "$ac_t""no" 1>&6
+fi
+done
+
+
+
 echo $ac_n "checking for tm_gmtoff in struct tm""... $ac_c" 1>&6
-echo "configure:5588: checking for tm_gmtoff in struct tm" >&5
+echo "configure:5727: checking for tm_gmtoff in struct tm" >&5
 cat > conftest.$ac_ext <<EOF
-#line 5590 "configure"
+#line 5729 "configure"
 #include "confdefs.h"
 
 #include <sys/time.h>
@@ -5595,7 +5734,7 @@ int main() {
 struct tm tm; tm.tm_gmtoff=0;
 ; return 0; }
 EOF
-if { (eval echo configure:5599: \"$ac_compile\") 1>&5; (eval $ac_compile) 2>&5; }; then
+if { (eval echo configure:5738: \"$ac_compile\") 1>&5; (eval $ac_compile) 2>&5; }; then
   rm -rf conftest*
   cat >> confdefs.h <<\EOF
 #define HAVE_TM_GMTOFF 1
@@ -5611,9 +5750,9 @@ fi
 rm -f conftest*
 
 echo $ac_n "checking for __tm_gmtoff in struct tm""... $ac_c" 1>&6
-echo "configure:5615: checking for __tm_gmtoff in struct tm" >&5
+echo "configure:5754: checking for __tm_gmtoff in struct tm" >&5
 cat > conftest.$ac_ext <<EOF
-#line 5617 "configure"
+#line 5756 "configure"
 #include "confdefs.h"
 
 #include <sys/time.h>
@@ -5622,7 +5761,7 @@ int main() {
 struct tm tm; tm.__tm_gmtoff=0;
 ; return 0; }
 EOF
-if { (eval echo configure:5626: \"$ac_compile\") 1>&5; (eval $ac_compile) 2>&5; }; then
+if { (eval echo configure:5765: \"$ac_compile\") 1>&5; (eval $ac_compile) 2>&5; }; then
   rm -rf conftest*
   cat >> confdefs.h <<\EOF
 #define HAVE___TM_GMTOFF 1
@@ -5638,9 +5777,9 @@ fi
 rm -f conftest*
 
 echo $ac_n "checking for global timezone variable""... $ac_c" 1>&6
-echo "configure:5642: checking for global timezone variable" >&5
+echo "configure:5781: checking for global timezone variable" >&5
 cat > conftest.$ac_ext <<EOF
-#line 5644 "configure"
+#line 5783 "configure"
 #include "confdefs.h"
 
 #include <sys/time.h>
@@ -5649,7 +5788,7 @@ int main() {
 timezone=0;
 ; return 0; }
 EOF
-if { (eval echo configure:5653: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
+if { (eval echo configure:5792: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
   rm -rf conftest*
   cat >> confdefs.h <<\EOF
 #define HAVE_TIMEZONE 1
@@ -5665,12 +5804,12 @@ fi
 rm -f conftest*
 
 echo $ac_n "checking whether struct tm is in sys/time.h or time.h""... $ac_c" 1>&6
-echo "configure:5669: checking whether struct tm is in sys/time.h or time.h" >&5
+echo "configure:5808: checking whether struct tm is in sys/time.h or time.h" >&5
 if eval "test \"`echo '$''{'ac_cv_struct_tm'+set}'`\" = set"; then
   echo $ac_n "(cached) $ac_c" 1>&6
 else
   cat > conftest.$ac_ext <<EOF
-#line 5674 "configure"
+#line 5813 "configure"
 #include "confdefs.h"
 #include <sys/types.h>
 #include <time.h>
@@ -5678,7 +5817,7 @@ int main() {
 struct tm *tp; tp->tm_sec;
 ; return 0; }
 EOF
-if { (eval echo configure:5682: \"$ac_compile\") 1>&5; (eval $ac_compile) 2>&5; }; then
+if { (eval echo configure:5821: \"$ac_compile\") 1>&5; (eval $ac_compile) 2>&5; }; then
   rm -rf conftest*
   ac_cv_struct_tm=time.h
 else
@@ -5699,12 +5838,12 @@ EOF
 fi
 
 echo $ac_n "checking for tm_zone in struct tm""... $ac_c" 1>&6
-echo "configure:5703: checking for tm_zone in struct tm" >&5
+echo "configure:5842: checking for tm_zone in struct tm" >&5
 if eval "test \"`echo '$''{'ac_cv_struct_tm_zone'+set}'`\" = set"; then
   echo $ac_n "(cached) $ac_c" 1>&6
 else
   cat > conftest.$ac_ext <<EOF
-#line 5708 "configure"
+#line 5847 "configure"
 #include "confdefs.h"
 #include <sys/types.h>
 #include <$ac_cv_struct_tm>
@@ -5712,7 +5851,7 @@ int main() {
 struct tm tm; tm.tm_zone;
 ; return 0; }
 EOF
-if { (eval echo configure:5716: \"$ac_compile\") 1>&5; (eval $ac_compile) 2>&5; }; then
+if { (eval echo configure:5855: \"$ac_compile\") 1>&5; (eval $ac_compile) 2>&5; }; then
   rm -rf conftest*
   ac_cv_struct_tm_zone=yes
 else
@@ -5732,12 +5871,12 @@ EOF
 
 else
   echo $ac_n "checking for tzname""... $ac_c" 1>&6
-echo "configure:5736: checking for tzname" >&5
+echo "configure:5875: checking for tzname" >&5
 if eval "test \"`echo '$''{'ac_cv_var_tzname'+set}'`\" = set"; then
   echo $ac_n "(cached) $ac_c" 1>&6
 else
   cat > conftest.$ac_ext <<EOF
-#line 5741 "configure"
+#line 5880 "configure"
 #include "confdefs.h"
 #include <time.h>
 #ifndef tzname /* For SGI.  */
@@ -5747,7 +5886,7 @@ int main() {
 atoi(*tzname);
 ; return 0; }
 EOF
-if { (eval echo configure:5751: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
+if { (eval echo configure:5890: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
   rm -rf conftest*
   ac_cv_var_tzname=yes
 else
@@ -5769,9 +5908,9 @@ EOF
 fi
 
 echo $ac_n "checking for struct timezone""... $ac_c" 1>&6
-echo "configure:5773: checking for struct timezone" >&5
+echo "configure:5912: checking for struct timezone" >&5
 cat > conftest.$ac_ext <<EOF
-#line 5775 "configure"
+#line 5914 "configure"
 #include "confdefs.h"
 
 #include <sys/types.h>
@@ -5781,7 +5920,7 @@ int main() {
 struct timezone tz; tz.tz_minuteswest=0;
 ; return 0; }
 EOF
-if { (eval echo configure:5785: \"$ac_compile\") 1>&5; (eval $ac_compile) 2>&5; }; then
+if { (eval echo configure:5924: \"$ac_compile\") 1>&5; (eval $ac_compile) 2>&5; }; then
   rm -rf conftest*
   cat >> confdefs.h <<\EOF
 #define HAVE_STRUCT_TIMEZONE 1
@@ -5797,9 +5936,9 @@ fi
 rm -f conftest*
 
 echo $ac_n "checking for st_blocks in struct stat""... $ac_c" 1>&6
-echo "configure:5801: checking for st_blocks in struct stat" >&5
+echo "configure:5940: checking for st_blocks in struct stat" >&5
 cat > conftest.$ac_ext <<EOF
-#line 5803 "configure"
+#line 5942 "configure"
 #include "confdefs.h"
 
 #include <sys/stat.h>
@@ -5807,7 +5946,7 @@ int main() {
 struct stat sb; sb.st_blocks=0;
 ; return 0; }
 EOF
-if { (eval echo configure:5811: \"$ac_compile\") 1>&5; (eval $ac_compile) 2>&5; }; then
+if { (eval echo configure:5950: \"$ac_compile\") 1>&5; (eval $ac_compile) 2>&5; }; then
   rm -rf conftest*
   cat >> confdefs.h <<\EOF
 #define HAVE_STAT_ST_BLOCKS 1
@@ -5825,12 +5964,12 @@ rm -f conftest*
 for ac_func in _getvideoconfig gettextinfo GetConsoleScreenBufferInfo
 do
 echo $ac_n "checking for $ac_func""... $ac_c" 1>&6
-echo "configure:5829: checking for $ac_func" >&5
+echo "configure:5968: checking for $ac_func" >&5
 if eval "test \"`echo '$''{'ac_cv_func_$ac_func'+set}'`\" = set"; then
   echo $ac_n "(cached) $ac_c" 1>&6
 else
   cat > conftest.$ac_ext <<EOF
-#line 5834 "configure"
+#line 5973 "configure"
 #include "confdefs.h"
 /* System header to define __stub macros and hopefully few prototypes,
     which can conflict with char $ac_func(); below.  */
@@ -5853,7 +5992,7 @@ $ac_func();
 
 ; return 0; }
 EOF
-if { (eval echo configure:5857: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
+if { (eval echo configure:5996: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
   rm -rf conftest*
   eval "ac_cv_func_$ac_func=yes"
 else
@@ -5880,12 +6019,12 @@ done
 for ac_func in _scrsize ioctl
 do
 echo $ac_n "checking for $ac_func""... $ac_c" 1>&6
-echo "configure:5884: checking for $ac_func" >&5
+echo "configure:6023: checking for $ac_func" >&5
 if eval "test \"`echo '$''{'ac_cv_func_$ac_func'+set}'`\" = set"; then
   echo $ac_n "(cached) $ac_c" 1>&6
 else
   cat > conftest.$ac_ext <<EOF
-#line 5889 "configure"
+#line 6028 "configure"
 #include "confdefs.h"
 /* System header to define __stub macros and hopefully few prototypes,
     which can conflict with char $ac_func(); below.  */
@@ -5908,7 +6047,7 @@ $ac_func();
 
 ; return 0; }
 EOF
-if { (eval echo configure:5912: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
+if { (eval echo configure:6051: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
   rm -rf conftest*
   eval "ac_cv_func_$ac_func=yes"
 else
@@ -5934,16 +6073,16 @@ done
 
 
 echo $ac_n "checking for struct videoconfig""... $ac_c" 1>&6
-echo "configure:5938: checking for struct videoconfig" >&5
+echo "configure:6077: checking for struct videoconfig" >&5
 cat > conftest.$ac_ext <<EOF
-#line 5940 "configure"
+#line 6079 "configure"
 #include "confdefs.h"
 
 int main() {
 struct videoconfig w; w.numtextcols=0;
 ; return 0; }
 EOF
-if { (eval echo configure:5947: \"$ac_compile\") 1>&5; (eval $ac_compile) 2>&5; }; then
+if { (eval echo configure:6086: \"$ac_compile\") 1>&5; (eval $ac_compile) 2>&5; }; then
   rm -rf conftest*
   cat >> confdefs.h <<\EOF
 #define HAVE_STRUCT_VIDEOCONFIG 1
@@ -5959,16 +6098,16 @@ fi
 rm -f conftest*
 
 echo $ac_n "checking for struct text_info""... $ac_c" 1>&6
-echo "configure:5963: checking for struct text_info" >&5
+echo "configure:6102: checking for struct text_info" >&5
 cat > conftest.$ac_ext <<EOF
-#line 5965 "configure"
+#line 6104 "configure"
 #include "confdefs.h"
 
 int main() {
 struct text_info w; w.screenwidth=0;
 ; return 0; }
 EOF
-if { (eval echo configure:5972: \"$ac_compile\") 1>&5; (eval $ac_compile) 2>&5; }; then
+if { (eval echo configure:6111: \"$ac_compile\") 1>&5; (eval $ac_compile) 2>&5; }; then
   rm -rf conftest*
   cat >> confdefs.h <<\EOF
 #define HAVE_STRUCT_TEXT_INFO 1
@@ -5984,16 +6123,16 @@ fi
 rm -f conftest*
 
 echo $ac_n "checking for TIOCGWINSZ""... $ac_c" 1>&6
-echo "configure:5988: checking for TIOCGWINSZ" >&5
+echo "configure:6127: checking for TIOCGWINSZ" >&5
 cat > conftest.$ac_ext <<EOF
-#line 5990 "configure"
+#line 6129 "configure"
 #include "confdefs.h"
 #include <sys/ioctl.h>
 int main() {
 int w=TIOCGWINSZ;
 ; return 0; }
 EOF
-if { (eval echo configure:5997: \"$ac_compile\") 1>&5; (eval $ac_compile) 2>&5; }; then
+if { (eval echo configure:6136: \"$ac_compile\") 1>&5; (eval $ac_compile) 2>&5; }; then
   rm -rf conftest*
   cat >> confdefs.h <<\EOF
 #define HAVE_TIOCGWINSZ 1
@@ -6009,16 +6148,16 @@ fi
 rm -f conftest*
 
 echo $ac_n "checking for TIOCGGETD""... $ac_c" 1>&6
-echo "configure:6013: checking for TIOCGGETD" >&5
+echo "configure:6152: checking for TIOCGGETD" >&5
 cat > conftest.$ac_ext <<EOF
-#line 6015 "configure"
+#line 6154 "configure"
 #include "confdefs.h"
 #include <sys/ioctl.h>
 int main() {
 int w=TIOCGETD;
 ; return 0; }
 EOF
-if { (eval echo configure:6022: \"$ac_compile\") 1>&5; (eval $ac_compile) 2>&5; }; then
+if { (eval echo configure:6161: \"$ac_compile\") 1>&5; (eval $ac_compile) 2>&5; }; then
   rm -rf conftest*
   cat >> confdefs.h <<\EOF
 #define HAVE_TIOCGETD 1
@@ -6037,12 +6176,12 @@ rm -f conftest*
 for ac_func in getpwuid gethostname system getrusage fork waitpid
 do
 echo $ac_n "checking for $ac_func""... $ac_c" 1>&6
-echo "configure:6041: checking for $ac_func" >&5
+echo "configure:6180: checking for $ac_func" >&5
 if eval "test \"`echo '$''{'ac_cv_func_$ac_func'+set}'`\" = set"; then
   echo $ac_n "(cached) $ac_c" 1>&6
 else
   cat > conftest.$ac_ext <<EOF
-#line 6046 "configure"
+#line 6185 "configure"
 #include "confdefs.h"
 /* System header to define __stub macros and hopefully few prototypes,
     which can conflict with char $ac_func(); below.  */
@@ -6065,7 +6204,7 @@ $ac_func();
 
 ; return 0; }
 EOF
-if { (eval echo configure:6069: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
+if { (eval echo configure:6208: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
   rm -rf conftest*
   eval "ac_cv_func_$ac_func=yes"
 else
@@ -6092,12 +6231,12 @@ done
 for ac_func in gettimeofday BSDgettimeofday difftime snprintf vsnprintf
 do
 echo $ac_n "checking for $ac_func""... $ac_c" 1>&6
-echo "configure:6096: checking for $ac_func" >&5
+echo "configure:6235: checking for $ac_func" >&5
 if eval "test \"`echo '$''{'ac_cv_func_$ac_func'+set}'`\" = set"; then
   echo $ac_n "(cached) $ac_c" 1>&6
 else
   cat > conftest.$ac_ext <<EOF
-#line 6101 "configure"
+#line 6240 "configure"
 #include "confdefs.h"
 /* System header to define __stub macros and hopefully few prototypes,
     which can conflict with char $ac_func(); below.  */
@@ -6120,7 +6259,7 @@ $ac_func();
 
 ; return 0; }
 EOF
-if { (eval echo configure:6124: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
+if { (eval echo configure:6263: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
   rm -rf conftest*
   eval "ac_cv_func_$ac_func=yes"
 else
@@ -6147,12 +6286,12 @@ done
 for ac_func in compress2 setsysinfo longjmp signal sigaction
 do
 echo $ac_n "checking for $ac_func""... $ac_c" 1>&6
-echo "configure:6151: checking for $ac_func" >&5
+echo "configure:6290: checking for $ac_func" >&5
 if eval "test \"`echo '$''{'ac_cv_func_$ac_func'+set}'`\" = set"; then
   echo $ac_n "(cached) $ac_c" 1>&6
 else
   cat > conftest.$ac_ext <<EOF
-#line 6156 "configure"
+#line 6295 "configure"
 #include "confdefs.h"
 /* System header to define __stub macros and hopefully few prototypes,
     which can conflict with char $ac_func(); below.  */
@@ -6175,7 +6314,7 @@ $ac_func();
 
 ; return 0; }
 EOF
-if { (eval echo configure:6179: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
+if { (eval echo configure:6318: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
   rm -rf conftest*
   eval "ac_cv_func_$ac_func=yes"
 else
@@ -6200,24 +6339,24 @@ fi
 done
 
 cat > conftest.$ac_ext <<EOF
-#line 6204 "configure"
+#line 6343 "configure"
 #include "confdefs.h"
 #include<sys/types.h>
 int main() {
 off64_t n = 0;
 ; return 0; }
 EOF
-if { (eval echo configure:6211: \"$ac_compile\") 1>&5; (eval $ac_compile) 2>&5; }; then
+if { (eval echo configure:6350: \"$ac_compile\") 1>&5; (eval $ac_compile) 2>&5; }; then
   rm -rf conftest*
   for ac_func in lseek64 fseek64
 do
 echo $ac_n "checking for $ac_func""... $ac_c" 1>&6
-echo "configure:6216: checking for $ac_func" >&5
+echo "configure:6355: checking for $ac_func" >&5
 if eval "test \"`echo '$''{'ac_cv_func_$ac_func'+set}'`\" = set"; then
   echo $ac_n "(cached) $ac_c" 1>&6
 else
   cat > conftest.$ac_ext <<EOF
-#line 6221 "configure"
+#line 6360 "configure"
 #include "confdefs.h"
 /* System header to define __stub macros and hopefully few prototypes,
     which can conflict with char $ac_func(); below.  */
@@ -6240,7 +6379,7 @@ $ac_func();
 
 ; return 0; }
 EOF
-if { (eval echo configure:6244: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
+if { (eval echo configure:6383: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
   rm -rf conftest*
   eval "ac_cv_func_$ac_func=yes"
 else
@@ -6275,12 +6414,12 @@ rm -f conftest*
 
 
 echo $ac_n "checking for working const""... $ac_c" 1>&6
-echo "configure:6279: checking for working const" >&5
+echo "configure:6418: checking for working const" >&5
 if eval "test \"`echo '$''{'ac_cv_c_const'+set}'`\" = set"; then
   echo $ac_n "(cached) $ac_c" 1>&6
 else
   cat > conftest.$ac_ext <<EOF
-#line 6284 "configure"
+#line 6423 "configure"
 #include "confdefs.h"
 
 int main() {
@@ -6329,7 +6468,7 @@ ccp = (char const *const *) p;
 
 ; return 0; }
 EOF
-if { (eval echo configure:6333: \"$ac_compile\") 1>&5; (eval $ac_compile) 2>&5; }; then
+if { (eval echo configure:6472: \"$ac_compile\") 1>&5; (eval $ac_compile) 2>&5; }; then
   rm -rf conftest*
   ac_cv_c_const=yes
 else
@@ -6350,21 +6489,21 @@ EOF
 fi
 
 echo $ac_n "checking for inline""... $ac_c" 1>&6
-echo "configure:6354: checking for inline" >&5
+echo "configure:6493: checking for inline" >&5
 if eval "test \"`echo '$''{'ac_cv_c_inline'+set}'`\" = set"; then
   echo $ac_n "(cached) $ac_c" 1>&6
 else
   ac_cv_c_inline=no
 for ac_kw in inline __inline__ __inline; do
   cat > conftest.$ac_ext <<EOF
-#line 6361 "configure"
+#line 6500 "configure"
 #include "confdefs.h"
 
 int main() {
 } $ac_kw foo() {
 ; return 0; }
 EOF
-if { (eval echo configure:6368: \"$ac_compile\") 1>&5; (eval $ac_compile) 2>&5; }; then
+if { (eval echo configure:6507: \"$ac_compile\") 1>&5; (eval $ac_compile) 2>&5; }; then
   rm -rf conftest*
   ac_cv_c_inline=$ac_kw; break
 else
@@ -6391,16 +6530,16 @@ esac
 
 
 echo $ac_n "checking for __attribute__ extension""... $ac_c" 1>&6
-echo "configure:6395: checking for __attribute__ extension" >&5
+echo "configure:6534: checking for __attribute__ extension" >&5
 cat > conftest.$ac_ext <<EOF
-#line 6397 "configure"
+#line 6536 "configure"
 #include "confdefs.h"
 
 int main() {
 int __attribute__((unused)) x
 ; return 0; }
 EOF
-if { (eval echo configure:6404: \"$ac_compile\") 1>&5; (eval $ac_compile) 2>&5; }; then
+if { (eval echo configure:6543: \"$ac_compile\") 1>&5; (eval $ac_compile) 2>&5; }; then
   rm -rf conftest*
   cat >> confdefs.h <<\EOF
 #define HAVE_ATTRIBUTE 1
@@ -6416,16 +6555,16 @@ fi
 rm -f conftest*
 
 echo $ac_n "checking for __FUNCTION__ extension""... $ac_c" 1>&6
-echo "configure:6420: checking for __FUNCTION__ extension" >&5
+echo "configure:6559: checking for __FUNCTION__ extension" >&5
 cat > conftest.$ac_ext <<EOF
-#line 6422 "configure"
+#line 6561 "configure"
 #include "confdefs.h"
 
 int main() {
 (void)__FUNCTION__
 ; return 0; }
 EOF
-if { (eval echo configure:6429: \"$ac_compile\") 1>&5; (eval $ac_compile) 2>&5; }; then
+if { (eval echo configure:6568: \"$ac_compile\") 1>&5; (eval $ac_compile) 2>&5; }; then
   rm -rf conftest*
   cat >> confdefs.h <<\EOF
 #define HAVE_FUNCTION 1
@@ -6441,7 +6580,7 @@ fi
 rm -f conftest*
 
 echo $ac_n "checking how to print long long""... $ac_c" 1>&6
-echo "configure:6445: checking how to print long long" >&5
+echo "configure:6584: checking how to print long long" >&5
 if eval "test \"`echo '$''{'hdf5_cv_printf_ll'+set}'`\" = set"; then
   echo $ac_n "(cached) $ac_c" 1>&6
 else
@@ -6450,7 +6589,7 @@ else
     { echo "configure: error: can not run test program while cross compiling" 1>&2; exit 1; }
 else
   cat > conftest.$ac_ext <<EOF
-#line 6454 "configure"
+#line 6593 "configure"
 #include "confdefs.h"
 
 #include <stdio.h>
@@ -6461,7 +6600,7 @@ else
 	             sprintf(s,"%${hdf5_cv_printf_ll}d",x);
 	             exit (strcmp(s,"1099511627776"));}
 EOF
-if { (eval echo configure:6465: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest && (./conftest; exit) 2>/dev/null
+if { (eval echo configure:6604: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest && (./conftest; exit) 2>/dev/null
 then
   break
 else
@@ -6481,7 +6620,7 @@ EOF
 
 
 echo $ac_n "checking for debug flags""... $ac_c" 1>&6
-echo "configure:6485: checking for debug flags" >&5
+echo "configure:6624: checking for debug flags" >&5
 # Check whether --enable-debug or --disable-debug was given.
 if test "${enable_debug+set}" = set; then
   enableval="$enable_debug"
@@ -6514,7 +6653,7 @@ if test "X" != "X$DEBUG_PKG"; then
 fi
 
 echo $ac_n "checking for API tracing""... $ac_c" 1>&6
-echo "configure:6518: checking for API tracing" >&5;
+echo "configure:6657: checking for API tracing" >&5;
 # Check whether --enable-trace or --disable-trace was given.
 if test "${enable_trace+set}" = set; then
   enableval="$enable_trace"
@@ -6544,7 +6683,7 @@ case "$CC_BASENAME" in
 	# exists.
 	PARALLEL=mpicc
 	echo $ac_n "checking for mpirun""... $ac_c" 1>&6
-echo "configure:6548: checking for mpirun" >&5
+echo "configure:6687: checking for mpirun" >&5
 
 	# Find the path where mpicc is located.
 	cmd=`echo $CC |cut -f1 -d' '`
@@ -6589,7 +6728,7 @@ fi
 
 
 echo $ac_n "checking for parallel support files""... $ac_c" 1>&6
-echo "configure:6593: checking for parallel support files" >&5
+echo "configure:6732: checking for parallel support files" >&5
 case "X-$enable_parallel" in
     X-|X-no|X-none)
 	# Either we are not compiling for parallel or the header and library
@@ -6620,7 +6759,7 @@ case "X-$enable_parallel" in
 	# is missing.
 	PARALLEL=mpich
 	echo $ac_n "checking for MPI_Init in -lmpich""... $ac_c" 1>&6
-echo "configure:6624: checking for MPI_Init in -lmpich" >&5
+echo "configure:6763: checking for MPI_Init in -lmpich" >&5
 ac_lib_var=`echo mpich'_'MPI_Init | sed 'y%./+-%__p_%'`
 if eval "test \"`echo '$''{'ac_cv_lib_$ac_lib_var'+set}'`\" = set"; then
   echo $ac_n "(cached) $ac_c" 1>&6
@@ -6628,7 +6767,7 @@ else
   ac_save_LIBS="$LIBS"
 LIBS="-lmpich  $LIBS"
 cat > conftest.$ac_ext <<EOF
-#line 6632 "configure"
+#line 6771 "configure"
 #include "confdefs.h"
 /* Override any gcc2 internal prototype to avoid an error.  */
 /* We use char because int might match the return type of a gcc2
@@ -6639,7 +6778,7 @@ int main() {
 MPI_Init()
 ; return 0; }
 EOF
-if { (eval echo configure:6643: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
+if { (eval echo configure:6782: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest; then
   rm -rf conftest*
   eval "ac_cv_lib_$ac_lib_var=yes"
 else
@@ -6688,10 +6827,10 @@ EOF
 
     # Display what we found about running programs
     echo $ac_n "checking prefix for running on one processor""... $ac_c" 1>&6
-echo "configure:6692: checking prefix for running on one processor" >&5
+echo "configure:6831: checking prefix for running on one processor" >&5
     echo "$ac_t""$RUNSERIAL" 1>&6
     echo $ac_n "checking prefix for running in parallel""... $ac_c" 1>&6
-echo "configure:6695: checking prefix for running in parallel" >&5
+echo "configure:6834: checking prefix for running in parallel" >&5
     echo "$ac_t""$RUNPARALLEL" 1>&6
 
     # Check that we can link a simple MPI and MPI-IO application
@@ -6954,6 +7093,7 @@ s%@H5TOH4@%$H5TOH4%g
 s%@TESTH5TOH4@%$TESTH5TOH4%g
 s%@GASS@%$GASS%g
 s%@TESTGASS@%$TESTGASS%g
+s%@PDB2HDF@%$PDB2HDF%g
 s%@DEBUG_PKG@%$DEBUG_PKG%g
 s%@TRACE_API@%$TRACE_API%g
 s%@PARALLEL@%$PARALLEL%g