diff options
author | jhendersonHDF <jhenderson@hdfgroup.org> | 2023-05-26 20:29:02 (GMT) |
---|---|---|
committer | GitHub <noreply@github.com> | 2023-05-26 20:29:02 (GMT) |
commit | 79bb60c3f6f67411e5d70b84743fc9f6b6143cbc (patch) | |
tree | dce0c97c567cb20eeb65de917e21347376979f18 /doc/cmake-vols-fetchcontent.md | |
parent | 77e64e0df46bb7498be014b1005efd49c4ad7518 (diff) | |
download | hdf5-79bb60c3f6f67411e5d70b84743fc9f6b6143cbc.zip hdf5-79bb60c3f6f67411e5d70b84743fc9f6b6143cbc.tar.gz hdf5-79bb60c3f6f67411e5d70b84743fc9f6b6143cbc.tar.bz2 |
API test updates (#3018)
* Remove macros from api tests (#2929)
* Remove macros and undefined callbacks (#2959)
* Remove remaining macros from H5_api_tests_disabled.h (#2968)
* Put some vol capability checks in testpar tests and remove remaining warnings (#2995)
* API tests datatype generation cleanup
* Clean up API tests' random datatype generation and fix bug with enum
datatype generation
* Init parallel API tests with MPI_THREAD_MULTIPLE
* HDF5 API tests - Check VOL connector registration
* Determine whether a VOL connector failed to load before running API
tests
* Cleanup some usages of H5VL_CAP_FLAG_CREATION_ORDER in API tests
* Remove some now-unused macros from H5_api_tests_disabled.h
* Enable HDF5 API tests by default
* Implement CMake option to install HDF5 API tests
* Check for invalid AAPL from H5Acreate
* Enable building of VOL connectors alongside HDF5 in CMake
* Prepend CMake VOL URL option indices with 0s so they come in order
* Don't turn on API tests by default yet
* Document VOL connector FetchContent functionality
* Add release note for API test updates
* Only install testing library if API tests are installed
* Fix grammar
Diffstat (limited to 'doc/cmake-vols-fetchcontent.md')
-rw-r--r-- | doc/cmake-vols-fetchcontent.md | 195 |
1 files changed, 195 insertions, 0 deletions
diff --git a/doc/cmake-vols-fetchcontent.md b/doc/cmake-vols-fetchcontent.md new file mode 100644 index 0000000..5f7b3d4 --- /dev/null +++ b/doc/cmake-vols-fetchcontent.md @@ -0,0 +1,195 @@ +# Building and testing HDF5 VOL connectors with CMake FetchContent + +This document details the process of using CMake options to build and test +an HDF5 VOL connector alongside the HDF5 library when building HDF5 from +source. There are several benefits that this may provide, but among them +are the following: + + * A VOL connector built this way can be tested at the same time that + HDF5 is, which eliminates the need to have a multi-step build process + where one builds HDF5, uses it to build the VOL connector and then + uses the external [HDF5 VOL tests](https://github.com/hdfGroup/vol-tests) + repository to test their connector. + * Building VOL connectors in this manner will usually install the built + connector library alongside the HDF5 library, allowing future opportunities + for HDF5 to set a default plugin path such that the HDF5_PLUGIN_PATH + environment variable doesn't need to be set. + +## Building + +To enable building of an HDF5 VOL connector using HDF5's CMake functionality, +two CMake variables must first be set: + + HDF5_VOL_ALLOW_EXTERNAL (Default: OFF) + This variable determines whether or not building of external HDF5 VOL connectors + is enabled. + + HDF5_ALLOW_EXTERNAL_SUPPORT (Default: "NO") + This variable is a string that specifies the manner in which the source code for + an external VOL connector will be retrieved. Currently, this variable must be set + to "GIT" for building external VOL connectors. + +Once the `HDF5_VOL_ALLOW_EXTERNAL` option is set to ON and the `HDF5_ALLOW_EXTERNAL_SUPPORT` +variable is set to "GIT", the CMake cache will be populated with a predefined +(currently 10) amount of new variables, named: + + HDF5_VOL_URL01 + HDF5_VOL_URL02 + HDF5_VOL_URL03 + ... + +For each of these variables, a URL that points to an HDF5 VOL connector Git +repository can be specified. These URLs should currently be HTTPS URLs. For +example, to specify the HDF5 Asynchronous I/O VOL Connector developed by the +ECP team, one can provide the following option to `cmake`: + + -DHDF5_VOL_URL01=https://github.com/hpc-io/vol-async.git + +For each URL specified, HDF5's CMake code will attempt to use CMake's +[FetchContent](https://cmake.org/cmake/help/latest/module/FetchContent.html) +functionality to retrieve the source code for a VOL connector pointed to by +that URL and will try to build that VOL connector as part of the HDF5 library +build process. The VOL connector must be able to be built by CMake and currently +must have a CMakeLists.txt file in the top level of the source tree in order to +be buildable by this process. If the source code for a VOL connector is successfully +retrieved, the HDF5 build's CMake cache will be populated with variables from +the VOL connector's CMake code, as if one were building the connector by itself. +This gives one the ability to customize the build of the connector as usual. + +The CMake cache will also be populated with a few new variables for each VOL +connector that was successfully retrieved from a given URL. To generate these +variables, the CMake code first creates an internal name for the VOL connector +by stripping off the last part of the Git repository URL given for the connector, +removing the ".git" suffix and any whitespace and then upper-casing the result. +For example, the name of the VOL connector located at the URL +https://github.com/hpc-io/vol-async.git would become "VOL-ASYNC". Then, the following +new variables get created: + + HDF5_VOL_<VOL name>_BRANCH (Default: "main") + This variable specifies the git branch name or tag to use when fetching + the source code for the VOL connector with the CMake-internal name + '<VOL name>'. + + HDF5_VOL_<VOL name>_NAME (Default: "") + This variable specifies the string that should be used when setting the + HDF5_VOL_CONNECTOR environment variable for testing the VOL connector + with the CMake-internal name '<VOL name>'. The value for this variable + can be determined according to the canonical name given to the connector + by the connector's author(s), as well as any extra info that needs to be + passed to the connector for its configuration (see example below). This + variable must be set in order for the VOL connector to be testable with + HDF5's tests. + + HDF5_VOL_<VOL name>_TEST_PARALLEL (Default: OFF) + This variable determines whether the VOL connector with the CMake-internal + name '<VOL name>' should be tested against HDF5's parallel tests. + +As an example, this would create the following variables for the +previously-mentioned VOL connector: + + HDF5_VOL_VOL-ASYNC_BRANCH + HDF5_VOL_VOL-ASYNC_NAME + HDF5_VOL_VOL-ASYNC_TEST_PARALLEL + +**NOTE** +If a VOL connector requires extra information to be passed in its +HDF5_VOL_<VOL name>_NAME variable and that information contains any semicolons, +those semicolons should be escaped with a single backslash so that CMake +doesn't parse the string as a list. If `cmake` is run from a shell, extra care +may need to be taken when escaping the semicolons depending on how the +shell interprets backslashes. + +### Example - Build and test HDF5 Asynchronous I/O VOL connector + +Assuming that the HDF5 source code has been checked out and a build directory +has been created, running the following cmake command from that build directory +will retrieve, build and test the HDF5 Asynchronous I/O VOL connector while +building HDF5. Note that `[hdf5 options]` represents other build options that +would typically be passed when building HDF5, such as `CMAKE_INSTALL_PREFIX`, +`HDF5_BUILD_CPP_LIB`, etc. + + cmake [hdf5 options] + -DHDF5_ENABLE_THREADSAFE=ON + -DHDF5_ENABLE_PARALLEL=ON + -DALLOW_UNSUPPORTED=ON + -DHDF5_TEST_API=ON + -DHDF5_VOL_ALLOW_EXTERNAL=ON + -DHDF5_ALLOW_EXTERNAL_SUPPORT="GIT" + -DHDF5_VOL_URL01=https://github.com/hpc-io/vol-async.git + -DHDF5_VOL_VOL-ASYNC_BRANCH=develop + -DHDF5_VOL_VOL-ASYNC_NAME="async under_vol=0\;under_info={}" + -DHDF5_VOL_VOL-ASYNC_TEST_PARALLEL=ON .. + +Here, we are specifying that: + + * HDF5 should be built with thread-safety enabled (required by Async VOL connector) + * HDF5 should be built with parallel enabled (required by Async VOL connector) + * Allow unsupported HDF5 combinations (thread-safety and HL, which is on by default) + * Enable the API tests so that they can be tested with the Async VOL connector + * Build and use the HDF5 Asynchronous I/O VOL connector, located at + https://github.com/hpc-io/vol-async.git + * Clone the Asynchronous I/O VOL connector from the repository's 'develop' branch + * When testing the Asynchronous I/O VOL connector, the `HDF5_VOL_CONNECTOR` environment + variable should be set to "async under_vol=0\;under_info={}", which + specifies that the VOL connector with the canonical name "async" should + be loaded and it should be passed the string "under_vol=0;under_info={}" + for its configuration + * The Asynchronous I/O VOL connector should be tested against HDF5's parallel API tests + +Note that this also assumes that the Asynchronous I/O VOL connector's +[other dependencies](https://hdf5-vol-async.readthedocs.io/en/latest/gettingstarted.html#preparation) +are installed on the system in a way that CMake can find them. If that is not +the case, the locations for these dependencies may need to be provided to CMake +by passing extra options, such as: + + -DABT_INCLUDE_DIR=/path/to/argobots/build/include + -DABT_LIBRARY=/path/to/argbots/build/lib/libabt.so + +which would help CMake find an argobots installation in a non-standard location. + +## Testing + +To facilitate testing of HDF5 VOL connectors when building HDF5, tests from +the [HDF5 VOL tests](https://github.com/hdfGroup/vol-tests) repository were +integrated back into the library and the following new CMake options were +added to HDF5 builds for the 1.14.1 release: + + HDF5_TEST_API (Default: OFF) + This variable determines whether the HDF5 API tests will be built and tested. + + HDF5_TEST_API_INSTALL (Default: OFF) + This variable determines whether the HDF5 API test executables will be installed + on the system alongside the HDF5 library. + + HDF5_TEST_API_ENABLE_ASYNC (Default: OFF) + This variable determines whether the HDF5 Asynchronous I/O API tests will be + built and tested. These tests will only run if a VOL connector reports that + it supports asynchronous I/O operations when queried via the H5Pget_vol_cap_flags + API routine. + + HDF5_TEST_API_ENABLE_DRIVER (Default: OFF) + This variable determines whether the HDF5 API test driver program will be + built and used for testing. This driver program is useful when a VOL connector + uses a client/server model where the server program needs to be up and running + before the VOL connector can function. This option is currently not functional. + +When the `HDF5_TEST_API` option is set to ON, HDF5's CMake code builds and tests +the new API tests using the native VOL connector. When one or more external VOL +connectors are built successfully with the process described in this document, +the CMake code will duplicate some of these API tests by adding separate +versions of the tests (for each VOL connector that was built) that set the +`HDF5_VOL_CONNECTOR` environment variable to the value specified for the +HDF5_VOL_<VOL name>_NAME variable for each external VOL connector at build time. +Running the `ctest` command will then run these new tests which load and run with +each VOL connector that was built in turn. When run via the `ctest` command, the +new tests typically follow the naming scheme: + + HDF5_VOL_<VOL name lowercase>-h5_api_test_<test name> + HDF5_VOL_<VOL name lowercase>-h5_api_test_parallel_<test name> + +**NOTE** +If dependencies of a built VOL connector are installed on the system in +a non-standard location that would typically require one to set `LD_LIBRARY_PATH` +or similar, one should ensure that those environment variables are set before +running tests. Otherwise, the tests that run with that connector will likely +fail due to being unable to load the necessary libraries for its dependencies. |