summaryrefslogtreecommitdiffstats
path: root/doc
diff options
context:
space:
mode:
authorBarbara Jones <bljones@hdfgroup.org>2001-03-08 16:26:51 (GMT)
committerBarbara Jones <bljones@hdfgroup.org>2001-03-08 16:26:51 (GMT)
commitb0db711d8e2a4a9be86ddeca0e87e22a19d73fdf (patch)
treedb209e2ddf19a779bf7e3b91cd37abf643b7ba1f /doc
parenta323e8da85eb6651fbdb81a48b292d4c6c6d1f10 (diff)
downloadhdf5-b0db711d8e2a4a9be86ddeca0e87e22a19d73fdf.zip
hdf5-b0db711d8e2a4a9be86ddeca0e87e22a19d73fdf.tar.gz
hdf5-b0db711d8e2a4a9be86ddeca0e87e22a19d73fdf.tar.bz2
[svn-r3557] added chunk.f90 to tutorial
Purpose: [is this a bug fix? feature? ...] Description: [describe the bug, or describe the new feature, etc] Solution: [details about the changes, algorithm, etc...] [Please as detail as you can since your own explanation is better than others guessing it from the code.] Platforms tested: [machines you have tested the changed version. This is absolute important. Test it out on at least two or three different platforms such as Big-endian-32bit (SUN/IRIX), little-endian-32(LINUX) and 64-bit (IRIX64/UNICOS/DEC-ALPHA) would be good.]
Diffstat (limited to 'doc')
-rw-r--r--doc/html/Tutor/examples/chunk.f90310
1 files changed, 310 insertions, 0 deletions
diff --git a/doc/html/Tutor/examples/chunk.f90 b/doc/html/Tutor/examples/chunk.f90
new file mode 100644
index 0000000..d67588e
--- /dev/null
+++ b/doc/html/Tutor/examples/chunk.f90
@@ -0,0 +1,310 @@
+!
+!This example shows how to work with extendible datasets.
+!It creates a 3 x 3 extendible dataset, write to that dataset,
+!extend the dataset to 10x3, and write to the dataset again
+!
+
+
+
+
+ PROGRAM CHUNKEXAMPLE
+
+ USE HDF5 ! This module contains all necessary modules
+
+ IMPLICIT NONE
+
+ !
+ !the dataset is stored in file "extf.h5"
+ !
+ CHARACTER(LEN=7), PARAMETER :: filename = "extf.h5"
+
+ !
+ !dataset name is "ExtendibleArray"
+ !
+ CHARACTER(LEN=15), PARAMETER :: dsetname = "ExtendibleArray"
+
+ !
+ !dataset rank is 2
+ !
+ INTEGER :: RANK = 2
+
+ INTEGER(HID_T) :: file_id ! File identifier
+ INTEGER(HID_T) :: dset_id ! Dataset identifier
+ INTEGER(HID_T) :: dataspace ! Dataspace identifier
+ INTEGER(HID_T) :: filespace ! Dataspace identifier
+ INTEGER(HID_T) :: memspace ! memspace identifier
+ INTEGER(HID_T) :: cparms !dataset creatation property identifier
+
+ !
+ !dataset dimensions at creation time
+ !
+ INTEGER(HSIZE_T), DIMENSION(2) :: dims = (/3,3/)
+
+ !
+ !data1 dimensions
+ !
+ INTEGER(HSIZE_T), DIMENSION(2) :: dims1 = (/3,3/)
+
+ !
+ !data2 dimensions
+ !
+ INTEGER(HSIZE_T), DIMENSION(2) :: dims2 = (/7,1/)
+
+ !
+ !Maximum dimensions
+ !
+ INTEGER(HSIZE_T), DIMENSION(2) :: maxdims
+
+ !
+ !data1 dimensions
+ !
+ INTEGER, DIMENSION(3,3) :: data1
+
+ !
+ !data2 dimensions
+ !
+ INTEGER, DIMENSION(7,1) :: data2
+
+ !
+ !Size of the hyperslab in the file
+ !
+ INTEGER(HSIZE_T), DIMENSION(2) :: size
+
+ !
+ !hyperslab offset in the file
+ !
+ INTEGER(HSIZE_T), DIMENSION(2) :: offset
+
+ !
+ !general purpose integer
+ !
+ INTEGER :: i, j, k
+
+ !
+ !flag to check operation success
+ !
+ INTEGER :: error, error_n
+
+ !
+ !Variables used in reading data back
+ !
+ INTEGER(HSIZE_T), DIMENSION(2) :: chunk_dims = (/5,2/)
+ INTEGER(HSIZE_T), DIMENSION(2) :: chunk_dimsr
+ INTEGER(HSIZE_T), DIMENSION(2) :: dimsr, maxdimsr
+ INTEGER, DIMENSION(10,3) :: data_out
+ INTEGER :: rankr, rank_chunk
+
+ !
+ !data initialization
+ !
+ do i = 1, 3
+ do j = 1, 3
+ data1(i,j) = 1
+ end do
+ end do
+
+ do j = 1, 7
+ data2(j,1) = 2
+ end do
+
+
+ !
+ !Initialize FORTRAN predifined datatypes
+ !
+ CALL h5close_f(error)
+
+ !
+ !Create a new file using default properties.
+ !
+ CALL h5fcreate_f(filename, H5F_ACC_TRUNC_F, file_id, error)
+
+
+ !
+ !Create the data space with unlimited dimensions.
+ !
+ maxdims = (/H5S_UNLIMITED_f, H5S_UNLIMITED_f/)
+
+ CALL h5screate_simple_f(RANK, dims, dataspace, error, maxdims)
+
+ !
+ !Modify dataset creation properties, i.e. enable chunking
+ !
+ CALL h5pcreate_f(H5P_DATASET_CREATE_F, cparms, error)
+
+ CALL h5pset_chunk_f(cparms, RANK, chunk_dims, error)
+
+ !
+ !Create a new dataset within the file using cparms creation properties.
+ !
+ !CALL h5dcreate_f(file_id, dsetname, H5T_NATIVE_INT_F, dataspace, &
+ CALL h5dcreate_f(file_id, dsetname, H5T_NATIVE_INTEGER, dataspace, &
+ dset_id, error, cparms)
+
+ !
+ !Extend the dataset. This call assures that dataset is 3 x 3.
+ !
+ size(1) = 3
+ size(2) = 3
+ CALL h5dextend_f(dset_id, size, error)
+
+
+ !
+ !Select a hyperslab.
+ !
+ CALL h5dget_space_f(dset_id, filespace, error)
+ offset(1) = 0;
+ offset(2) = 0;
+ CALL h5sselect_hyperslab_f(filespace, H5S_SELECT_SET_F, &
+ offset, dims1, error)
+
+ !
+ !Write the data to the hyperslab.
+ !
+ !CALL H5Dwrite_f(dset_id, H5T_NATIVE_INT_F, data1, error, &
+ CALL H5Dwrite_f(dset_id, H5T_NATIVE_INTEGER, data1, error, &
+ filespace, dataspace)
+
+ !
+ !Extend the dataset. Dataset becomes 10 x 3.
+ !
+ dims(1) = dims1(1) + dims2(1);
+ size(1) = dims(1);
+ size(2) = dims(2);
+ CALL h5dextend_f(dset_id, size, error)
+
+ !
+ !Select a hyperslab.
+ !
+ CALL h5dget_space_f(dset_id, filespace, error)
+ offset(1) = 3;
+ offset(2) = 0;
+ CALL h5sselect_hyperslab_f(filespace, H5S_SELECT_SET_F, &
+ offset, dims2, error)
+
+ !
+ !create memory dataspace.
+ !
+ CALL h5screate_simple_f(RANK, dims2, memspace, error)
+
+ !
+ !Write the data to the hyperslab.
+ !
+ !CALL H5Dwrite_f(dset_id, H5T_NATIVE_INT_F, data2, error, &
+ CALL H5Dwrite_f(dset_id, H5T_NATIVE_INTEGER, data2, error, &
+ mem_space_id=memspace, file_space_id=filespace)
+
+ !
+ !Close the dataspace for the dataset.
+ !
+ CALL h5sclose_f(dataspace, error)
+ CALL h5sclose_f(filespace, error)
+
+ !
+ !Close the memoryspace.
+ !
+ CALL h5sclose_f(memspace, error)
+
+ !
+ !Close the dataset.
+ !
+ CALL h5dclose_f(dset_id, error)
+
+ !
+ !Close the property list.
+ !
+ CALL h5pclose_f(cparms, error)
+
+ !
+ !Close the file.
+ !
+ CALL h5fclose_f(file_id, error)
+
+ !
+ !read the data back
+ !
+ !Open the file.
+ !
+ CALL h5fopen_f (filename, H5F_ACC_RDONLY_F, file_id, error)
+
+ !
+ !Open the dataset.
+ !
+ CALL h5dopen_f(file_id, dsetname, dset_id, error)
+
+ !
+ !Get dataset's dataspace handle.
+ !
+ CALL h5dget_space_f(dset_id, dataspace, error)
+
+ !
+ !Get dataspace's rank.
+ !
+ CALL h5sget_simple_extent_ndims_f(dataspace, rankr, error)
+
+
+ !
+ !Get dataspace's dimensinons.
+ !
+ CALL h5sget_simple_extent_dims_f(dataspace, dimsr, maxdimsr, error)
+
+
+ !
+ !Get creation property list.
+ !
+ CALL h5dget_create_plist_f(dset_id, cparms, error)
+
+ !
+ !Get chunk dimensions.
+ !
+ CALL h5pget_chunk_f(cparms, 2, chunk_dimsr, error)
+
+ !
+ !create memory dataspace.
+ !
+ CALL h5screate_simple_f(rankr, dimsr, memspace, error)
+
+ !
+ !Read data
+ !
+ !CALL H5Dread_f(dset_id, H5T_NATIVE_INT_F, data_out, error, &
+ CALL H5Dread_f(dset_id, H5T_NATIVE_INTEGER, data_out, error, &
+ memspace, dataspace)
+
+ !
+ !Print data
+ !
+ do i = 1, dimsr(1)
+ print *, (data_out(i,j), j = 1,dimsr(2))
+ end do
+
+ !
+ !Close the dataspace for the dataset.
+ !
+ CALL h5sclose_f(dataspace, error)
+
+ !
+ !Close the memoryspace.
+ !
+ CALL h5sclose_f(memspace, error)
+
+ !
+ !Close the dataset.
+ !
+ CALL h5dclose_f(dset_id, error)
+
+ !
+ !Close the file.
+ !
+ CALL h5fclose_f(file_id, error)
+
+ !
+ !Close the property list.
+ !
+ CALL h5pclose_f(cparms, error)
+
+ !
+ ! Close FORTRAN predefined datatypes.
+ !
+ CALL h5close_f(error)
+
+ END PROGRAM CHUNKEXAMPLE