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authorScot Breitenfeld <brtnfld@hdfgroup.org>2012-12-12 04:00:34 (GMT)
committerScot Breitenfeld <brtnfld@hdfgroup.org>2012-12-12 04:00:34 (GMT)
commit7155aa6f1dbf1d01765f5a61dbbeb13098f548f6 (patch)
tree56a909cc236f4a761c7f1e8538de9c9a53918188 /examples/h5_extend.c
parent3079b8dde8eabe7b130473a859a3f0abddd46c2d (diff)
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[svn-r23091] Changed C examples to reflect changes in documentation via Barbara;
mainly program additions from tutorial. Tested: jam (gnu compilers)
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+/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
+ * Copyright by The HDF Group. *
+ * Copyright by the Board of Trustees of the University of Illinois. *
+ * All rights reserved. *
+ * *
+ * This file is part of HDF5. The full HDF5 copyright notice, including *
+ * terms governing use, modification, and redistribution, is contained in *
+ * the files COPYING and Copyright.html. COPYING can be found at the root *
+ * of the source code distribution tree; Copyright.html can be found at the *
+ * root level of an installed copy of the electronic HDF5 document set and *
+ * is linked from the top-level documents page. It can also be found at *
+ * http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have *
+ * access to either file, you may request a copy from help@hdfgroup.org. *
+ * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
+
+/*
+ * This example how to work with extendible datasets. The dataset
+ * must be chunked in order to be extendible.
+ *
+ * It is used in the HDF5 Tutorial.
+ */
+
+
+#include "hdf5.h"
+
+#define FILENAME "extend.h5"
+#define DATASETNAME "ExtendibleArray"
+#define RANK 2
+
+int
+main (void)
+{
+ hid_t file; /* handles */
+ hid_t dataspace, dataset;
+ hid_t filespace, memspace;
+ hid_t prop;
+
+ hsize_t dims[2] = {3, 3}; /* dataset dimensions at creation time */
+ hsize_t maxdims[2] = {H5S_UNLIMITED, H5S_UNLIMITED};
+ herr_t status;
+ hsize_t chunk_dims[2] = {2, 5};
+ int data[3][3] = { {1, 1, 1}, /* data to write */
+ {1, 1, 1},
+ {1, 1, 1} };
+
+ /* Variables used in extending and writing to the extended portion of dataset */
+ hsize_t size[2];
+ hsize_t offset[2];
+ hsize_t dimsext[2] = {7, 3}; /* extend dimensions */
+ int dataext[7][3] = { {2, 3, 4},
+ {2, 3, 4},
+ {2, 3, 4},
+ {2, 3, 4},
+ {2, 3, 4},
+ {2, 3, 4},
+ {2, 3, 4} };
+
+ /* Variables used in reading data back */
+ hsize_t chunk_dimsr[2];
+ hsize_t dimsr[2];
+ hsize_t i, j;
+ int rdata[10][3];
+ herr_t status_n;
+ int rank, rank_chunk;
+
+ /* Create the data space with unlimited dimensions. */
+ dataspace = H5Screate_simple (RANK, dims, maxdims);
+
+ /* Create a new file. If file exists its contents will be overwritten. */
+ file = H5Fcreate (FILENAME, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
+
+ /* Modify dataset creation properties, i.e. enable chunking */
+ prop = H5Pcreate (H5P_DATASET_CREATE);
+ status = H5Pset_chunk (prop, RANK, chunk_dims);
+
+ /* Create a new dataset within the file using chunk
+ creation properties. */
+ dataset = H5Dcreate (file, DATASETNAME, H5T_NATIVE_INT, dataspace,
+ H5P_DEFAULT, prop, H5P_DEFAULT);
+
+ /* Write data to dataset */
+ status = H5Dwrite (dataset, H5T_NATIVE_INT, H5S_ALL, H5S_ALL,
+ H5P_DEFAULT, data);
+
+ /* Extend the dataset. Dataset becomes 10 x 3 */
+ size[0] = dims[0]+ dimsext[0];
+ size[1] = dims[1];
+ status = H5Dextend (dataset, size);
+
+ /* Select a hyperslab in extended portion of dataset */
+ filespace = H5Dget_space (dataset);
+ offset[0] = 3;
+ offset[1] = 0;
+ status = H5Sselect_hyperslab (filespace, H5S_SELECT_SET, offset, NULL,
+ dimsext, NULL);
+
+ /* Define memory space */
+ memspace = H5Screate_simple (RANK, dimsext, NULL);
+
+ /* Write the data to the extended portion of dataset */
+ status = H5Dwrite (dataset, H5T_NATIVE_INT, memspace, filespace,
+ H5P_DEFAULT, dataext);
+
+ /* Close resources */
+ status = H5Dclose (dataset);
+ status = H5Pclose (prop);
+ status = H5Sclose (dataspace);
+ status = H5Sclose (memspace);
+ status = H5Sclose (filespace);
+ status = H5Fclose (file);
+
+ /********************************************
+ * Re-open the file and read the data back. *
+ ********************************************/
+
+ file = H5Fopen (FILENAME, H5F_ACC_RDONLY, H5P_DEFAULT);
+ dataset = H5Dopen (file, DATASETNAME, H5P_DEFAULT);
+
+ filespace = H5Dget_space (dataset);
+ rank = H5Sget_simple_extent_ndims (filespace);
+ status_n = H5Sget_simple_extent_dims (filespace, dimsr, NULL);
+
+ prop = H5Dget_create_plist (dataset);
+
+ if (H5D_CHUNKED == H5Pget_layout (prop))
+ rank_chunk = H5Pget_chunk (prop, rank, chunk_dimsr);
+
+ memspace = H5Screate_simple (rank, dimsr, NULL);
+ status = H5Dread (dataset, H5T_NATIVE_INT, memspace, filespace,
+ H5P_DEFAULT, rdata);
+
+ printf("\n");
+ printf("Dataset: \n");
+ for (j = 0; j < dimsr[0]; j++)
+ {
+ for (i = 0; i < dimsr[1]; i++)
+ printf("%d ", rdata[j][i]);
+ printf("\n");
+ }
+
+ status = H5Pclose (prop);
+ status = H5Dclose (dataset);
+ status = H5Sclose (filespace);
+ status = H5Sclose (memspace);
+ status = H5Fclose (file);
+}