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author | Mohamad Chaarawi <chaarawi@hdfgroup.org> | 2013-10-02 16:06:55 (GMT) |
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committer | Mohamad Chaarawi <chaarawi@hdfgroup.org> | 2013-10-02 16:06:55 (GMT) |
commit | 09b12f328c86e8069e407842f8f08f2437002c41 (patch) | |
tree | a61eb9faf75197445fed6f3d144bbcea2300eb2c /examples/h5ff_client_dset.c | |
parent | 7efc3ee024ddb3381725d7d0f7fe7ff7d63f0337 (diff) | |
download | hdf5-09b12f328c86e8069e407842f8f08f2437002c41.zip hdf5-09b12f328c86e8069e407842f8f08f2437002c41.tar.gz hdf5-09b12f328c86e8069e407842f8f08f2437002c41.tar.bz2 |
[svn-r24247] - update dset example with l-g,g-l open_by_token
- use max dims to create IOD array dataset instead of cur dims and add range checking for I/O at client.
Diffstat (limited to 'examples/h5ff_client_dset.c')
-rw-r--r-- | examples/h5ff_client_dset.c | 152 |
1 files changed, 103 insertions, 49 deletions
diff --git a/examples/h5ff_client_dset.c b/examples/h5ff_client_dset.c index f571d74..5ae072c 100644 --- a/examples/h5ff_client_dset.c +++ b/examples/h5ff_client_dset.c @@ -31,9 +31,11 @@ int main(int argc, char **argv) { hsize_t dims[1]; hsize_t extent; + void *dset_token1, *dset_token2, *dset_token3; + size_t token_size1, token_size2, token_size3; int my_rank, my_size; int provided; - MPI_Request mpi_req; + MPI_Request mpi_req, mpi_reqs[6]; H5ES_status_t status; size_t num_events = 0; @@ -111,50 +113,100 @@ int main(int argc, char **argv) { Leader can tell its delegates that the transaction is started. */ if(0 == my_rank) { + trans_num = 1; ret = H5TRstart(tid1, H5P_DEFAULT, H5_EVENT_STACK_NULL); assert(0 == ret); - trans_num = 1; + /* Leader also create some objects in transaction 1 */ + + /* create group hierarchy /G1/G2/G3 */ + gid1 = H5Gcreate_ff(file_id, "G1", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT, tid1, e_stack); + assert(gid1 > 0); + gid2 = H5Gcreate_ff(gid1, "G2", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT, tid1, e_stack); + assert(gid2 > 0); + gid3 = H5Gcreate_ff(gid2, "G3", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT, tid1, e_stack); + assert(gid3 > 0); + + /* create datasets */ + did1 = H5Dcreate_ff(gid1, "D1", dtid, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT, tid1, e_stack); + assert(did1 > 0); + did2 = H5Dcreate_ff(gid2, "D2", dtid, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT, tid1, e_stack); + assert(did2 > 0); + did3 = H5Dcreate_ff(gid3, "D3", dtid, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT, tid1, e_stack); + assert(did3 > 0); + + ret = H5Gclose_ff(gid1, e_stack); + assert(ret == 0); + ret = H5Gclose_ff(gid2, e_stack); + assert(ret == 0); + ret = H5Gclose_ff(gid3, e_stack); + assert(ret == 0); } /* Tell Delegates that transaction 1 is started */ MPI_Ibcast(&trans_num, 1, MPI_UINT64_T, 0, MPI_COMM_WORLD, &mpi_req); + /* Do the local-to-global, global-to-local, so all delegates can + write to the dsets created in transaction 1 */ + + if(0 == my_rank) { + /* get the token size of each dset */ + ret = H5Oget_token(did1, NULL, &token_size1); + assert(0 == ret); + ret = H5Oget_token(did2, NULL, &token_size2); + assert(0 == ret); + ret = H5Oget_token(did3, NULL, &token_size3); + assert(0 == ret); + + /* allocate buffers for each token */ + dset_token1 = malloc(token_size1); + dset_token2 = malloc(token_size2); + dset_token3 = malloc(token_size3); + + /* get the token buffer */ + ret = H5Oget_token(did1, dset_token1, &token_size1); + assert(0 == ret); + ret = H5Oget_token(did2, dset_token2, &token_size2); + assert(0 == ret); + ret = H5Oget_token(did3, dset_token3, &token_size3); + assert(0 == ret); + + /* bcast the token sizes and the tokens */ + MPI_Ibcast(&token_size1, sizeof(size_t), MPI_BYTE, 0, MPI_COMM_WORLD, &mpi_reqs[0]); + MPI_Ibcast(&token_size2, sizeof(size_t), MPI_BYTE, 0, MPI_COMM_WORLD, &mpi_reqs[1]); + MPI_Ibcast(&token_size3, sizeof(size_t), MPI_BYTE, 0, MPI_COMM_WORLD, &mpi_reqs[2]); + MPI_Ibcast(dset_token1, token_size1, MPI_BYTE, 0, MPI_COMM_WORLD, &mpi_reqs[3]); + MPI_Ibcast(dset_token2, token_size2, MPI_BYTE, 0, MPI_COMM_WORLD, &mpi_reqs[4]); + MPI_Ibcast(dset_token3, token_size3, MPI_BYTE, 0, MPI_COMM_WORLD, &mpi_reqs[5]); + } + /* Leader can continue writing to transaction 1, while others wait for the ibcast to complete */ - if(0 != my_rank) + if(0 != my_rank) { MPI_Wait(&mpi_req, MPI_STATUS_IGNORE); - - assert(1 == trans_num); - - /* - Assume the following object create calls are collective. - - In a real world scenario, the following create calls are - independent by default; i.e. only 1 process, typically a leader - process, calls them. The user does the local-to-global, - global-to-local thing to get the objects accessible to all delegates. - - This will not fail here because IOD used for now is skeletal, - so it does not matter if the calls are collective or - independent. - */ - - /* create group hierarchy /G1/G2/G3 */ - gid1 = H5Gcreate_ff(file_id, "G1", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT, tid1, e_stack); - assert(gid1 > 0); - gid2 = H5Gcreate_ff(gid1, "G2", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT, tid1, e_stack); - assert(gid2 > 0); - gid3 = H5Gcreate_ff(gid2, "G3", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT, tid1, e_stack); - assert(gid3 > 0); - - /* create datasets */ - did1 = H5Dcreate_ff(gid1, "D1", dtid, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT, tid1, e_stack); - assert(did1 > 0); - did2 = H5Dcreate_ff(gid2, "D2", dtid, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT, tid1, e_stack); - assert(did2 > 0); - did3 = H5Dcreate_ff(gid3, "D3", dtid, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT, tid1, e_stack); - assert(did3 > 0); + assert(1 == trans_num); + + /* recieve the token sizes */ + MPI_Ibcast(&token_size1, sizeof(size_t), MPI_BYTE, 0, MPI_COMM_WORLD, &mpi_reqs[0]); + MPI_Ibcast(&token_size2, sizeof(size_t), MPI_BYTE, 0, MPI_COMM_WORLD, &mpi_reqs[1]); + MPI_Ibcast(&token_size3, sizeof(size_t), MPI_BYTE, 0, MPI_COMM_WORLD, &mpi_reqs[2]); + MPI_Waitall(3, mpi_reqs, MPI_STATUS_IGNORE); + + /* allocate buffers for each token */ + dset_token1 = malloc(token_size1); + dset_token2 = malloc(token_size2); + dset_token3 = malloc(token_size3); + + /* recieve the tokens */ + MPI_Ibcast(dset_token1, token_size1, MPI_BYTE, 0, MPI_COMM_WORLD, &mpi_reqs[0]); + MPI_Ibcast(dset_token2, token_size2, MPI_BYTE, 0, MPI_COMM_WORLD, &mpi_reqs[1]); + MPI_Ibcast(dset_token3, token_size3, MPI_BYTE, 0, MPI_COMM_WORLD, &mpi_reqs[2]); + MPI_Waitall(3, mpi_reqs, MPI_STATUS_IGNORE); + + did1 = H5Oopen_by_token(dset_token1, rid1, e_stack); + did2 = H5Oopen_by_token(dset_token2, rid1, e_stack); + did3 = H5Oopen_by_token(dset_token3, rid1, e_stack); + } /* write data to datasets */ @@ -228,8 +280,6 @@ int main(int argc, char **argv) { /* close some objects */ ret = H5Dclose_ff(did1, e_stack); assert(ret == 0); - ret = H5Gclose_ff(gid1, e_stack); - assert(ret == 0); /* release container version 0. This is async. */ ret = H5RCrelease(rid1, e_stack); @@ -341,17 +391,25 @@ int main(int argc, char **argv) { /* Do more updates on transaction 2 */ - extent = 10; - ret = H5Dset_extent_ff(did1, &extent, tid2, e_stack); - assert(ret == 0); + if(0 == my_rank) { + extent = 10; + ret = H5Dset_extent_ff(did1, &extent, tid2, e_stack); + assert(ret == 0); + } - extent = 30; - ret = H5Dset_extent_ff(did2, &extent, tid2, e_stack); - assert(ret == 0); + if((my_size > 1 && 1 == my_rank) || + (my_size == 1 && 0 == my_rank)) { + extent = 30; + ret = H5Dset_extent_ff(did2, &extent, tid2, e_stack); + assert(ret == 0); + } - extent = 60; - ret = H5Dset_extent_ff(did3, &extent, tid2, e_stack); - assert(ret == 0); + if((my_size > 2 && 2 == my_rank) || + (my_size == 1 && 0 == my_rank)) { + extent = 60; + ret = H5Dset_extent_ff(did3, &extent, tid2, e_stack); + assert(ret == 0); + } /* finish transaction 2 - all have to call */ ret = H5TRfinish(tid2, H5P_DEFAULT, NULL, e_stack); @@ -372,10 +430,6 @@ int main(int argc, char **argv) { assert(ret == 0); ret = H5Gclose_ff(gid1, e_stack); assert(ret == 0); - ret = H5Gclose_ff(gid2, e_stack); - assert(ret == 0); - ret = H5Gclose_ff(gid3, e_stack); - assert(ret == 0); ret = H5Sclose(sid); assert(ret == 0); |