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authorElena Pourmal <epourmal@hdfgroup.org>1998-02-10 18:06:11 (GMT)
committerElena Pourmal <epourmal@hdfgroup.org>1998-02-10 18:06:11 (GMT)
commit885953832ba3fa1e6163a4a9becdd88920062412 (patch)
tree3856ff0f92dadf21b8b59112eea1ad700434d411 /examples
parentfcaa973a2afe313c4ee716fcd19f152913b4d23a (diff)
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[svn-r242] Example showing how to read from chunked dataset has been added.
Diffstat (limited to 'examples')
-rw-r--r--examples/h5_chunk_read.c139
1 files changed, 139 insertions, 0 deletions
diff --git a/examples/h5_chunk_read.c b/examples/h5_chunk_read.c
new file mode 100644
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+++ b/examples/h5_chunk_read.c
@@ -0,0 +1,139 @@
+/*
+ * This example shows how to read data from a chunked dataset.
+ * We will read from the file created by h5_extend_write.c
+ */
+
+#include "hdf5.h"
+
+#define FILE "SDSextendable.h5"
+#define DATASETNAME "ExtendableArray"
+#define RANK 2
+#define NX 10
+#define NY 5
+
+main ()
+{
+ hid_t file; /* handles */
+ hid_t datatype, dataset;
+ hid_t filespace;
+ hid_t memspace;
+ hid_t cparms;
+ H5T_class_t class; /* data type class */
+ size_t elem_size; /* size of the data element
+ stored in file */
+ size_t dims[2]; /* dataset and chunk dimensions */
+ size_t chunk_dims[2];
+
+ size_t size[2];
+ size_t count[2];
+ int offset[2];
+
+ herr_t status, status_n;
+
+ int data_out[NX][NY]; /* buffer for dataset to be read */
+ int chunk_out[2][5]; /* buffer for chunk to be read */
+ int i, j, rank, rank_chunk;
+
+
+/*
+ * Open the file and the dataset.
+ */
+file = H5Fopen(FILE, H5ACC_DEFAULT, H5C_DEFAULT);
+dataset = H5Dopen(file, DATASETNAME);
+
+/*
+ * Get dataset rank and dimension.
+ */
+
+filespace = H5Dget_space(dataset); /* Get filespace handle first. */
+rank = H5Pget_ndims(filespace);
+status_n = H5Pget_dims(filespace, dims);
+printf("dataset rank %d, dimensions %d x %d \n", rank, dims[0], dims[1]);
+
+/*
+ * Get creation properties.
+ */
+cparms = H5Dget_create_parms(dataset); /* Get properties handle first. */
+
+/*
+ * Get chunking information: rank and dimensions
+ */
+rank_chunk = H5Cget_chunk(cparms, 2, chunk_dims);
+printf("chunk rank %d, dimensions %d x %d \n", rank_chunk,
+ chunk_dims[0], chunk_dims[1]);
+
+
+/*
+ * Define the memory space to read dataset.
+ */
+memspace = H5Pcreate_simple(RANK,dims,NULL);
+
+/*
+ * Read dataset back and display.
+ */
+status = H5Dread(dataset, H5T_NATIVE_INT, memspace, filespace,
+ H5C_DEFAULT, data_out);
+ printf("\n");
+ printf("Dataset: \n");
+for (j = 0; j < dims[0]; j++) {
+ for (i = 0; i < dims[1]; i++) printf("%d ", data_out[j][i]);
+ printf("\n");
+}
+
+/*
+ dataset rank 2, dimensions 10 x 5
+ chunk rank 2, dimensions 2 x 5
+
+ Dataset:
+ 1 1 1 3 3
+ 1 1 1 3 3
+ 1 1 1 0 0
+ 2 0 0 0 0
+ 2 0 0 0 0
+ 2 0 0 0 0
+ 2 0 0 0 0
+ 2 0 0 0 0
+ 2 0 0 0 0
+ 2 0 0 0 0
+*/
+
+/*
+ * Define the memory space to read a chunk.
+ */
+memspace = H5Pcreate_simple(rank_chunk,chunk_dims,NULL);
+
+/*
+ * Define chunk in the file (hyperslab) to read.
+ */
+offset[0] = 2;
+offset[1] = 0;
+count[0] = chunk_dims[0];
+count[1] = chunk_dims[1];
+status = H5Pset_hyperslab(filespace, offset, count, NULL);
+
+/*
+ * Read chunk back and display.
+ */
+status = H5Dread(dataset, H5T_NATIVE_INT, memspace, filespace,
+ H5C_DEFAULT, chunk_out);
+ printf("\n");
+ printf("Chunk: \n");
+for (j = 0; j < chunk_dims[0]; j++) {
+ for (i = 0; i < chunk_dims[1]; i++) printf("%d ", chunk_out[j][i]);
+ printf("\n");
+}
+/*
+ Chunk:
+ 1 1 1 0 0
+ 2 0 0 0 0
+*/
+
+/*
+ * Close/release resources.
+ */
+H5Dclose(dataset);
+H5Pclose(filespace);
+H5Pclose(memspace);
+H5Fclose(file);
+
+}