[svn-r9902] Purpose:

Configuration feature

Description:
HDF5 now uses automake to generate Makefiles

Solution:
Makefile.in files are now generated from Makefile.am files.
To reconfigure (after chaning a Makefile.am or configure.in):
/bin/sh bin/reconfigure.sh

Platforms tested:
Many

3 files changed, 725 insertions, 618 deletions

diff --git a/examples/Dependencies b/examples/Dependencies
deleted file mode 100644
index 8bcd2d6..0000000
--- a/examples/Dependencies
+++ /dev/null
@@ -1,471 +0,0 @@
-## This file is machine generated on GNU systems.
-## Only temporary changes may be made here.
-
-h5_chunk_read.o: \
-   ../../hdf5/examples/h5_chunk_read.c \
-   ../../hdf5/src/hdf5.h \
-   ../../hdf5/src/H5public.h \
-   ../src/H5pubconf.h \
-   ../../hdf5/src/H5api_adpt.h \
-   ../../hdf5/src/H5Apublic.h \
-   ../../hdf5/src/H5Ipublic.h \
-   ../../hdf5/src/H5ACpublic.h \
-   ../../hdf5/src/H5Bpublic.h \
-   ../../hdf5/src/H5Dpublic.h \
-   ../../hdf5/src/H5Epublic.h \
-   ../../hdf5/src/H5Epubgen.h \
-   ../../hdf5/src/H5Fpublic.h \
-   ../../hdf5/src/H5FDpublic.h \
-   ../../hdf5/src/H5FPpublic.h \
-   ../../hdf5/src/H5Gpublic.h \
-   ../../hdf5/src/H5Opublic.h \
-   ../../hdf5/src/H5HGpublic.h \
-   ../../hdf5/src/H5HLpublic.h \
-   ../../hdf5/src/H5MMpublic.h \
-   ../../hdf5/src/H5Ppublic.h \
-   ../../hdf5/src/H5Zpublic.h \
-   ../../hdf5/src/H5Rpublic.h \
-   ../../hdf5/src/H5Spublic.h \
-   ../../hdf5/src/H5Tpublic.h \
-   ../../hdf5/src/H5FDcore.h \
-   ../../hdf5/src/H5FDfamily.h \
-   ../../hdf5/src/H5FDgass.h \
-   ../../hdf5/src/H5FDlog.h \
-   ../../hdf5/src/H5FDmpi.h \
-   ../../hdf5/src/H5FDfphdf5.h \
-   ../../hdf5/src/H5FDmpio.h \
-   ../../hdf5/src/H5FDmpiposix.h \
-   ../../hdf5/src/H5FDmulti.h \
-   ../../hdf5/src/H5FDsec2.h \
-   ../../hdf5/src/H5FDsrb.h \
-   ../../hdf5/src/H5FDstdio.h \
-   ../../hdf5/src/H5FDstream.h
-h5_compound.o: \
-   ../../hdf5/examples/h5_compound.c \
-   ../../hdf5/src/hdf5.h \
-   ../../hdf5/src/H5public.h \
-   ../src/H5pubconf.h \
-   ../../hdf5/src/H5api_adpt.h \
-   ../../hdf5/src/H5Apublic.h \
-   ../../hdf5/src/H5Ipublic.h \
-   ../../hdf5/src/H5ACpublic.h \
-   ../../hdf5/src/H5Bpublic.h \
-   ../../hdf5/src/H5Dpublic.h \
-   ../../hdf5/src/H5Epublic.h \
-   ../../hdf5/src/H5Epubgen.h \
-   ../../hdf5/src/H5Fpublic.h \
-   ../../hdf5/src/H5FDpublic.h \
-   ../../hdf5/src/H5FPpublic.h \
-   ../../hdf5/src/H5Gpublic.h \
-   ../../hdf5/src/H5Opublic.h \
-   ../../hdf5/src/H5HGpublic.h \
-   ../../hdf5/src/H5HLpublic.h \
-   ../../hdf5/src/H5MMpublic.h \
-   ../../hdf5/src/H5Ppublic.h \
-   ../../hdf5/src/H5Zpublic.h \
-   ../../hdf5/src/H5Rpublic.h \
-   ../../hdf5/src/H5Spublic.h \
-   ../../hdf5/src/H5Tpublic.h \
-   ../../hdf5/src/H5FDcore.h \
-   ../../hdf5/src/H5FDfamily.h \
-   ../../hdf5/src/H5FDgass.h \
-   ../../hdf5/src/H5FDlog.h \
-   ../../hdf5/src/H5FDmpi.h \
-   ../../hdf5/src/H5FDfphdf5.h \
-   ../../hdf5/src/H5FDmpio.h \
-   ../../hdf5/src/H5FDmpiposix.h \
-   ../../hdf5/src/H5FDmulti.h \
-   ../../hdf5/src/H5FDsec2.h \
-   ../../hdf5/src/H5FDsrb.h \
-   ../../hdf5/src/H5FDstdio.h \
-   ../../hdf5/src/H5FDstream.h
-h5_extend_write.o: \
-   ../../hdf5/examples/h5_extend_write.c \
-   ../../hdf5/src/hdf5.h \
-   ../../hdf5/src/H5public.h \
-   ../src/H5pubconf.h \
-   ../../hdf5/src/H5api_adpt.h \
-   ../../hdf5/src/H5Apublic.h \
-   ../../hdf5/src/H5Ipublic.h \
-   ../../hdf5/src/H5ACpublic.h \
-   ../../hdf5/src/H5Bpublic.h \
-   ../../hdf5/src/H5Dpublic.h \
-   ../../hdf5/src/H5Epublic.h \
-   ../../hdf5/src/H5Epubgen.h \
-   ../../hdf5/src/H5Fpublic.h \
-   ../../hdf5/src/H5FDpublic.h \
-   ../../hdf5/src/H5FPpublic.h \
-   ../../hdf5/src/H5Gpublic.h \
-   ../../hdf5/src/H5Opublic.h \
-   ../../hdf5/src/H5HGpublic.h \
-   ../../hdf5/src/H5HLpublic.h \
-   ../../hdf5/src/H5MMpublic.h \
-   ../../hdf5/src/H5Ppublic.h \
-   ../../hdf5/src/H5Zpublic.h \
-   ../../hdf5/src/H5Rpublic.h \
-   ../../hdf5/src/H5Spublic.h \
-   ../../hdf5/src/H5Tpublic.h \
-   ../../hdf5/src/H5FDcore.h \
-   ../../hdf5/src/H5FDfamily.h \
-   ../../hdf5/src/H5FDgass.h \
-   ../../hdf5/src/H5FDlog.h \
-   ../../hdf5/src/H5FDmpi.h \
-   ../../hdf5/src/H5FDfphdf5.h \
-   ../../hdf5/src/H5FDmpio.h \
-   ../../hdf5/src/H5FDmpiposix.h \
-   ../../hdf5/src/H5FDmulti.h \
-   ../../hdf5/src/H5FDsec2.h \
-   ../../hdf5/src/H5FDsrb.h \
-   ../../hdf5/src/H5FDstdio.h \
-   ../../hdf5/src/H5FDstream.h
-h5_group.o: \
-   ../../hdf5/examples/h5_group.c \
-   ../../hdf5/src/hdf5.h \
-   ../../hdf5/src/H5public.h \
-   ../src/H5pubconf.h \
-   ../../hdf5/src/H5api_adpt.h \
-   ../../hdf5/src/H5Apublic.h \
-   ../../hdf5/src/H5Ipublic.h \
-   ../../hdf5/src/H5ACpublic.h \
-   ../../hdf5/src/H5Bpublic.h \
-   ../../hdf5/src/H5Dpublic.h \
-   ../../hdf5/src/H5Epublic.h \
-   ../../hdf5/src/H5Epubgen.h \
-   ../../hdf5/src/H5Fpublic.h \
-   ../../hdf5/src/H5FDpublic.h \
-   ../../hdf5/src/H5FPpublic.h \
-   ../../hdf5/src/H5Gpublic.h \
-   ../../hdf5/src/H5Opublic.h \
-   ../../hdf5/src/H5HGpublic.h \
-   ../../hdf5/src/H5HLpublic.h \
-   ../../hdf5/src/H5MMpublic.h \
-   ../../hdf5/src/H5Ppublic.h \
-   ../../hdf5/src/H5Zpublic.h \
-   ../../hdf5/src/H5Rpublic.h \
-   ../../hdf5/src/H5Spublic.h \
-   ../../hdf5/src/H5Tpublic.h \
-   ../../hdf5/src/H5FDcore.h \
-   ../../hdf5/src/H5FDfamily.h \
-   ../../hdf5/src/H5FDgass.h \
-   ../../hdf5/src/H5FDlog.h \
-   ../../hdf5/src/H5FDmpi.h \
-   ../../hdf5/src/H5FDfphdf5.h \
-   ../../hdf5/src/H5FDmpio.h \
-   ../../hdf5/src/H5FDmpiposix.h \
-   ../../hdf5/src/H5FDmulti.h \
-   ../../hdf5/src/H5FDsec2.h \
-   ../../hdf5/src/H5FDsrb.h \
-   ../../hdf5/src/H5FDstdio.h \
-   ../../hdf5/src/H5FDstream.h
-h5_read.o: \
-   ../../hdf5/examples/h5_read.c \
-   ../../hdf5/src/hdf5.h \
-   ../../hdf5/src/H5public.h \
-   ../src/H5pubconf.h \
-   ../../hdf5/src/H5api_adpt.h \
-   ../../hdf5/src/H5Apublic.h \
-   ../../hdf5/src/H5Ipublic.h \
-   ../../hdf5/src/H5ACpublic.h \
-   ../../hdf5/src/H5Bpublic.h \
-   ../../hdf5/src/H5Dpublic.h \
-   ../../hdf5/src/H5Epublic.h \
-   ../../hdf5/src/H5Epubgen.h \
-   ../../hdf5/src/H5Fpublic.h \
-   ../../hdf5/src/H5FDpublic.h \
-   ../../hdf5/src/H5FPpublic.h \
-   ../../hdf5/src/H5Gpublic.h \
-   ../../hdf5/src/H5Opublic.h \
-   ../../hdf5/src/H5HGpublic.h \
-   ../../hdf5/src/H5HLpublic.h \
-   ../../hdf5/src/H5MMpublic.h \
-   ../../hdf5/src/H5Ppublic.h \
-   ../../hdf5/src/H5Zpublic.h \
-   ../../hdf5/src/H5Rpublic.h \
-   ../../hdf5/src/H5Spublic.h \
-   ../../hdf5/src/H5Tpublic.h \
-   ../../hdf5/src/H5FDcore.h \
-   ../../hdf5/src/H5FDfamily.h \
-   ../../hdf5/src/H5FDgass.h \
-   ../../hdf5/src/H5FDlog.h \
-   ../../hdf5/src/H5FDmpi.h \
-   ../../hdf5/src/H5FDfphdf5.h \
-   ../../hdf5/src/H5FDmpio.h \
-   ../../hdf5/src/H5FDmpiposix.h \
-   ../../hdf5/src/H5FDmulti.h \
-   ../../hdf5/src/H5FDsec2.h \
-   ../../hdf5/src/H5FDsrb.h \
-   ../../hdf5/src/H5FDstdio.h \
-   ../../hdf5/src/H5FDstream.h
-h5_write.o: \
-   ../../hdf5/examples/h5_write.c \
-   ../../hdf5/src/hdf5.h \
-   ../../hdf5/src/H5public.h \
-   ../src/H5pubconf.h \
-   ../../hdf5/src/H5api_adpt.h \
-   ../../hdf5/src/H5Apublic.h \
-   ../../hdf5/src/H5Ipublic.h \
-   ../../hdf5/src/H5ACpublic.h \
-   ../../hdf5/src/H5Bpublic.h \
-   ../../hdf5/src/H5Dpublic.h \
-   ../../hdf5/src/H5Epublic.h \
-   ../../hdf5/src/H5Epubgen.h \
-   ../../hdf5/src/H5Fpublic.h \
-   ../../hdf5/src/H5FDpublic.h \
-   ../../hdf5/src/H5FPpublic.h \
-   ../../hdf5/src/H5Gpublic.h \
-   ../../hdf5/src/H5Opublic.h \
-   ../../hdf5/src/H5HGpublic.h \
-   ../../hdf5/src/H5HLpublic.h \
-   ../../hdf5/src/H5MMpublic.h \
-   ../../hdf5/src/H5Ppublic.h \
-   ../../hdf5/src/H5Zpublic.h \
-   ../../hdf5/src/H5Rpublic.h \
-   ../../hdf5/src/H5Spublic.h \
-   ../../hdf5/src/H5Tpublic.h \
-   ../../hdf5/src/H5FDcore.h \
-   ../../hdf5/src/H5FDfamily.h \
-   ../../hdf5/src/H5FDgass.h \
-   ../../hdf5/src/H5FDlog.h \
-   ../../hdf5/src/H5FDmpi.h \
-   ../../hdf5/src/H5FDfphdf5.h \
-   ../../hdf5/src/H5FDmpio.h \
-   ../../hdf5/src/H5FDmpiposix.h \
-   ../../hdf5/src/H5FDmulti.h \
-   ../../hdf5/src/H5FDsec2.h \
-   ../../hdf5/src/H5FDsrb.h \
-   ../../hdf5/src/H5FDstdio.h \
-   ../../hdf5/src/H5FDstream.h
-h5_select.o: \
-   ../../hdf5/examples/h5_select.c \
-   ../../hdf5/src/hdf5.h \
-   ../../hdf5/src/H5public.h \
-   ../src/H5pubconf.h \
-   ../../hdf5/src/H5api_adpt.h \
-   ../../hdf5/src/H5Apublic.h \
-   ../../hdf5/src/H5Ipublic.h \
-   ../../hdf5/src/H5ACpublic.h \
-   ../../hdf5/src/H5Bpublic.h \
-   ../../hdf5/src/H5Dpublic.h \
-   ../../hdf5/src/H5Epublic.h \
-   ../../hdf5/src/H5Epubgen.h \
-   ../../hdf5/src/H5Fpublic.h \
-   ../../hdf5/src/H5FDpublic.h \
-   ../../hdf5/src/H5FPpublic.h \
-   ../../hdf5/src/H5Gpublic.h \
-   ../../hdf5/src/H5Opublic.h \
-   ../../hdf5/src/H5HGpublic.h \
-   ../../hdf5/src/H5HLpublic.h \
-   ../../hdf5/src/H5MMpublic.h \
-   ../../hdf5/src/H5Ppublic.h \
-   ../../hdf5/src/H5Zpublic.h \
-   ../../hdf5/src/H5Rpublic.h \
-   ../../hdf5/src/H5Spublic.h \
-   ../../hdf5/src/H5Tpublic.h \
-   ../../hdf5/src/H5FDcore.h \
-   ../../hdf5/src/H5FDfamily.h \
-   ../../hdf5/src/H5FDgass.h \
-   ../../hdf5/src/H5FDlog.h \
-   ../../hdf5/src/H5FDmpi.h \
-   ../../hdf5/src/H5FDfphdf5.h \
-   ../../hdf5/src/H5FDmpio.h \
-   ../../hdf5/src/H5FDmpiposix.h \
-   ../../hdf5/src/H5FDmulti.h \
-   ../../hdf5/src/H5FDsec2.h \
-   ../../hdf5/src/H5FDsrb.h \
-   ../../hdf5/src/H5FDstdio.h \
-   ../../hdf5/src/H5FDstream.h
-h5_attribute.o: \
-   ../../hdf5/examples/h5_attribute.c \
-   ../../hdf5/src/hdf5.h \
-   ../../hdf5/src/H5public.h \
-   ../src/H5pubconf.h \
-   ../../hdf5/src/H5api_adpt.h \
-   ../../hdf5/src/H5Apublic.h \
-   ../../hdf5/src/H5Ipublic.h \
-   ../../hdf5/src/H5ACpublic.h \
-   ../../hdf5/src/H5Bpublic.h \
-   ../../hdf5/src/H5Dpublic.h \
-   ../../hdf5/src/H5Epublic.h \
-   ../../hdf5/src/H5Epubgen.h \
-   ../../hdf5/src/H5Fpublic.h \
-   ../../hdf5/src/H5FDpublic.h \
-   ../../hdf5/src/H5FPpublic.h \
-   ../../hdf5/src/H5Gpublic.h \
-   ../../hdf5/src/H5Opublic.h \
-   ../../hdf5/src/H5HGpublic.h \
-   ../../hdf5/src/H5HLpublic.h \
-   ../../hdf5/src/H5MMpublic.h \
-   ../../hdf5/src/H5Ppublic.h \
-   ../../hdf5/src/H5Zpublic.h \
-   ../../hdf5/src/H5Rpublic.h \
-   ../../hdf5/src/H5Spublic.h \
-   ../../hdf5/src/H5Tpublic.h \
-   ../../hdf5/src/H5FDcore.h \
-   ../../hdf5/src/H5FDfamily.h \
-   ../../hdf5/src/H5FDgass.h \
-   ../../hdf5/src/H5FDlog.h \
-   ../../hdf5/src/H5FDmpi.h \
-   ../../hdf5/src/H5FDfphdf5.h \
-   ../../hdf5/src/H5FDmpio.h \
-   ../../hdf5/src/H5FDmpiposix.h \
-   ../../hdf5/src/H5FDmulti.h \
-   ../../hdf5/src/H5FDsec2.h \
-   ../../hdf5/src/H5FDsrb.h \
-   ../../hdf5/src/H5FDstdio.h \
-   ../../hdf5/src/H5FDstream.h
-h5_mount.o: \
-   ../../hdf5/examples/h5_mount.c \
-   ../../hdf5/src/hdf5.h \
-   ../../hdf5/src/H5public.h \
-   ../src/H5pubconf.h \
-   ../../hdf5/src/H5api_adpt.h \
-   ../../hdf5/src/H5Apublic.h \
-   ../../hdf5/src/H5Ipublic.h \
-   ../../hdf5/src/H5ACpublic.h \
-   ../../hdf5/src/H5Bpublic.h \
-   ../../hdf5/src/H5Dpublic.h \
-   ../../hdf5/src/H5Epublic.h \
-   ../../hdf5/src/H5Epubgen.h \
-   ../../hdf5/src/H5Fpublic.h \
-   ../../hdf5/src/H5FDpublic.h \
-   ../../hdf5/src/H5FPpublic.h \
-   ../../hdf5/src/H5Gpublic.h \
-   ../../hdf5/src/H5Opublic.h \
-   ../../hdf5/src/H5HGpublic.h \
-   ../../hdf5/src/H5HLpublic.h \
-   ../../hdf5/src/H5MMpublic.h \
-   ../../hdf5/src/H5Ppublic.h \
-   ../../hdf5/src/H5Zpublic.h \
-   ../../hdf5/src/H5Rpublic.h \
-   ../../hdf5/src/H5Spublic.h \
-   ../../hdf5/src/H5Tpublic.h \
-   ../../hdf5/src/H5FDcore.h \
-   ../../hdf5/src/H5FDfamily.h \
-   ../../hdf5/src/H5FDgass.h \
-   ../../hdf5/src/H5FDlog.h \
-   ../../hdf5/src/H5FDmpi.h \
-   ../../hdf5/src/H5FDfphdf5.h \
-   ../../hdf5/src/H5FDmpio.h \
-   ../../hdf5/src/H5FDmpiposix.h \
-   ../../hdf5/src/H5FDmulti.h \
-   ../../hdf5/src/H5FDsec2.h \
-   ../../hdf5/src/H5FDsrb.h \
-   ../../hdf5/src/H5FDstdio.h \
-   ../../hdf5/src/H5FDstream.h
-h5_reference.o: \
-   ../../hdf5/examples/h5_reference.c \
-   ../../hdf5/src/hdf5.h \
-   ../../hdf5/src/H5public.h \
-   ../src/H5pubconf.h \
-   ../../hdf5/src/H5api_adpt.h \
-   ../../hdf5/src/H5Apublic.h \
-   ../../hdf5/src/H5Ipublic.h \
-   ../../hdf5/src/H5ACpublic.h \
-   ../../hdf5/src/H5Bpublic.h \
-   ../../hdf5/src/H5Dpublic.h \
-   ../../hdf5/src/H5Epublic.h \
-   ../../hdf5/src/H5Epubgen.h \
-   ../../hdf5/src/H5Fpublic.h \
-   ../../hdf5/src/H5FDpublic.h \
-   ../../hdf5/src/H5FPpublic.h \
-   ../../hdf5/src/H5Gpublic.h \
-   ../../hdf5/src/H5Opublic.h \
-   ../../hdf5/src/H5HGpublic.h \
-   ../../hdf5/src/H5HLpublic.h \
-   ../../hdf5/src/H5MMpublic.h \
-   ../../hdf5/src/H5Ppublic.h \
-   ../../hdf5/src/H5Zpublic.h \
-   ../../hdf5/src/H5Rpublic.h \
-   ../../hdf5/src/H5Spublic.h \
-   ../../hdf5/src/H5Tpublic.h \
-   ../../hdf5/src/H5FDcore.h \
-   ../../hdf5/src/H5FDfamily.h \
-   ../../hdf5/src/H5FDgass.h \
-   ../../hdf5/src/H5FDlog.h \
-   ../../hdf5/src/H5FDmpi.h \
-   ../../hdf5/src/H5FDfphdf5.h \
-   ../../hdf5/src/H5FDmpio.h \
-   ../../hdf5/src/H5FDmpiposix.h \
-   ../../hdf5/src/H5FDmulti.h \
-   ../../hdf5/src/H5FDsec2.h \
-   ../../hdf5/src/H5FDsrb.h \
-   ../../hdf5/src/H5FDstdio.h \
-   ../../hdf5/src/H5FDstream.h
-h5_drivers.o: \
-   ../../hdf5/examples/h5_drivers.c \
-   ../../hdf5/src/hdf5.h \
-   ../../hdf5/src/H5public.h \
-   ../src/H5pubconf.h \
-   ../../hdf5/src/H5api_adpt.h \
-   ../../hdf5/src/H5Apublic.h \
-   ../../hdf5/src/H5Ipublic.h \
-   ../../hdf5/src/H5ACpublic.h \
-   ../../hdf5/src/H5Bpublic.h \
-   ../../hdf5/src/H5Dpublic.h \
-   ../../hdf5/src/H5Epublic.h \
-   ../../hdf5/src/H5Epubgen.h \
-   ../../hdf5/src/H5Fpublic.h \
-   ../../hdf5/src/H5FDpublic.h \
-   ../../hdf5/src/H5FPpublic.h \
-   ../../hdf5/src/H5Gpublic.h \
-   ../../hdf5/src/H5Opublic.h \
-   ../../hdf5/src/H5HGpublic.h \
-   ../../hdf5/src/H5HLpublic.h \
-   ../../hdf5/src/H5MMpublic.h \
-   ../../hdf5/src/H5Ppublic.h \
-   ../../hdf5/src/H5Zpublic.h \
-   ../../hdf5/src/H5Rpublic.h \
-   ../../hdf5/src/H5Spublic.h \
-   ../../hdf5/src/H5Tpublic.h \
-   ../../hdf5/src/H5FDcore.h \
-   ../../hdf5/src/H5FDfamily.h \
-   ../../hdf5/src/H5FDgass.h \
-   ../../hdf5/src/H5FDlog.h \
-   ../../hdf5/src/H5FDmpi.h \
-   ../../hdf5/src/H5FDfphdf5.h \
-   ../../hdf5/src/H5FDmpio.h \
-   ../../hdf5/src/H5FDmpiposix.h \
-   ../../hdf5/src/H5FDmulti.h \
-   ../../hdf5/src/H5FDsec2.h \
-   ../../hdf5/src/H5FDsrb.h \
-   ../../hdf5/src/H5FDstdio.h \
-   ../../hdf5/src/H5FDstream.h
-ph5example.o: \
-   ../../hdf5/examples/ph5example.c \
-   ../../hdf5/src/hdf5.h \
-   ../../hdf5/src/H5public.h \
-   ../src/H5pubconf.h \
-   ../../hdf5/src/H5api_adpt.h \
-   ../../hdf5/src/H5Apublic.h \
-   ../../hdf5/src/H5Ipublic.h \
-   ../../hdf5/src/H5ACpublic.h \
-   ../../hdf5/src/H5Bpublic.h \
-   ../../hdf5/src/H5Dpublic.h \
-   ../../hdf5/src/H5Epublic.h \
-   ../../hdf5/src/H5Epubgen.h \
-   ../../hdf5/src/H5Fpublic.h \
-   ../../hdf5/src/H5FDpublic.h \
-   ../../hdf5/src/H5FPpublic.h \
-   ../../hdf5/src/H5Gpublic.h \
-   ../../hdf5/src/H5Opublic.h \
-   ../../hdf5/src/H5HGpublic.h \
-   ../../hdf5/src/H5HLpublic.h \
-   ../../hdf5/src/H5MMpublic.h \
-   ../../hdf5/src/H5Ppublic.h \
-   ../../hdf5/src/H5Zpublic.h \
-   ../../hdf5/src/H5Rpublic.h \
-   ../../hdf5/src/H5Spublic.h \
-   ../../hdf5/src/H5Tpublic.h \
-   ../../hdf5/src/H5FDcore.h \
-   ../../hdf5/src/H5FDfamily.h \
-   ../../hdf5/src/H5FDgass.h \
-   ../../hdf5/src/H5FDlog.h \
-   ../../hdf5/src/H5FDmpi.h \
-   ../../hdf5/src/H5FDfphdf5.h \
-   ../../hdf5/src/H5FDmpio.h \
-   ../../hdf5/src/H5FDmpiposix.h \
-   ../../hdf5/src/H5FDmulti.h \
-   ../../hdf5/src/H5FDsec2.h \
-   ../../hdf5/src/H5FDsrb.h \
-   ../../hdf5/src/H5FDstdio.h \
-   ../../hdf5/src/H5FDstream.h
diff --git a/examples/Makefile.am b/examples/Makefile.am
new file mode 100644
index 0000000..be9d5ae
--- /dev/null
+++ b/examples/Makefile.am
@@ -0,0 +1,113 @@
+#
+# Copyright by the Board of Trustees of the University of Illinois.
+# All rights reserved.
+#
+# This file is part of HDF5.  The full HDF5 copyright notice, including
+# terms governing use, modification, and redistribution, is contained in
+# the files COPYING and Copyright.html.  COPYING can be found at the root
+# of the source code distribution tree; Copyright.html can be found at the
+# root level of an installed copy of the electronic HDF5 document set and
+# is linked from the top-level documents page.  It can also be found at
+# http://hdf.ncsa.uiuc.edu/HDF5/doc/Copyright.html.  If you do not have
+# access to either file, you may request a copy from hdfhelp@ncsa.uiuc.edu.
+##
+## Makefile.am
+## Run automake to generate a Makefile.in from this file.
+##
+#
+# HDF5 Library Examples Makefile(.in)
+#
+
+include $(top_srcdir)/config/commence.am
+
+if BUILD_PARALLEL_CONDITIONAL
+  TEST_PROG_PARA = ph5example
+else
+  TEST_PROG_PARA =
+endif
+
+# Example programs.
+# Don't tell automake about them, because if it knew they were programs,
+# it would try to compile them instead of using the h5cc script.
+# This creates some extra work for us.
+#
+# It might be possible to use automake's COMPILE variable to have it
+# use h5cc properly (and h5fc and h5c++).
+TEST_PROG = h5_write h5_read h5_extend_write h5_chunk_read h5_compound   \
+           h5_group h5_select h5_attribute h5_mount h5_reference h5_drivers
+
+# Tell conclude.in boilerplate when to build the examples
+EXAMPLE_PROG = $(TEST_PROG_PARA) $(TEST_PROG)
+EXTRA_PROG = $(EXAMPLE_PROG)
+
+# Install files
+# List all file that should be installed in examples directory
+INSTALL_FILES = h5_write.c h5_read.c h5_extend_write.c h5_chunk_read.c   \
+          h5_compound.c h5_group.c h5_select.c h5_attribute.c h5_mount.c \
+          h5_reference.c h5_drivers.c ph5example.c
+
+# We need to tell automake what to clean
+CLEANFILES=*.h5 *.raw *.meta *.clog $(TEST_PROG) ph5example *.o
+
+# Additional dependencies for each program are listed below.
+$(EXTRA_PROG): $(LIBHDF5)
+if BUILD_PARALLEL_CONDITIONAL
+	$(H5CC_PP) $(CFLAGS) -o $@ $(srcdir)/$@.c;
+else
+	$(H5CC) $(CFLAGS) -o $@ $(srcdir)/$@.c;
+endif
+
+# How to install examples
+# There are a lot of rules because automake does not know about
+# the examples programs, and does not recognize the install-examples
+# target.
+EXAMPLEDIR=$(docdir)/hdf5/examples/c
+
+$(EXAMPLEDIR):
+	-$(top_srcdir)/bin/mkdirs $@
+
+install-data-local:
+	$(MAKE) install-examples
+uninstall-local:
+	$(MAKE) uninstall-examples
+
+# We want to install the source files, not the examples themselves.  Add '.c' to
+# each example to get its source.  This is a bit kludgy.
+install-examples: $(EXAMPLEDIR) $(INSTALL_FILES)
+	@for f in X $(INSTALL_FILES); do                                     \
+	  if test $$f != X; then                                             \
+	    (set -x; $(INSTALL) $(top_srcdir)/examples/$$f $(EXAMPLEDIR)/. || exit 1);\
+	  fi;                                                                \
+	done
+
+uninstall-examples:
+	@if test -n "$(INSTALL_FILES)" -a -d $(EXAMPLEDIR); then                                 \
+	  set -x; cd $(EXAMPLEDIR) && $(RM) $(INSTALL_FILES).c;              \
+	fi
+
+check-install:
+	$(MAKE) installcheck
+installcheck-local:
+	$(MAKE) check
+
+# List dependencies for each program.  Normally, automake would take
+# care of this for us, but if we tell automake about the programs it
+# will try to build them with the normal C compiler, not h5cc.  This is
+# an inelegant way of solving the problem.
+# All programs share the same build rule and a dependency on the main hdf5
+# library above.
+h5_chunk_read: $(srcdir)/h5_chunk_read.c
+h5_compound: $(srcdir)/h5_compound.c
+h5_extend_write: $(srcdir)/h5_extend_write.c
+h5_group: $(srcdir)/h5_group.c
+h5_write: $(srcdir)/h5_write.c
+h5_read: $(srcdir)/h5_read.c
+h5_select: $(srcdir)/h5_select.c
+h5_attribute: $(srcdir)/h5_attribute.c
+h5_mount: $(srcdir)/h5_mount.c
+h5_reference: $(srcdir)/h5_reference.c
+h5_drivers: $(srcdir)/h5_drivers.c
+ph5example: $(srcdir)/ph5example.c
+h5_dtransform: $(srcdir)/h5_dtransform.c
+
+include $(top_srcdir)/config/conclude.am
diff --git a/examples/Makefile.in b/examples/Makefile.in
index 33ff82e..4c56389 100644
--- a/examples/Makefile.in
+++ b/examples/Makefile.in
@@ -1,168 +1,633 @@
-##
-## Copyright by the Board of Trustees of the University of Illinois.
-## All rights reserved.
-##
-## This file is part of HDF5.  The full HDF5 copyright notice, including
-## terms governing use, modification, and redistribution, is contained in
-## the files COPYING and Copyright.html.  COPYING can be found at the root
-## of the source code distribution tree; Copyright.html can be found at the
-## root level of an installed copy of the electronic HDF5 document set and
-## is linked from the top-level documents page.  It can also be found at
-## http://hdf.ncsa.uiuc.edu/HDF5/doc/Copyright.html.  If you do not have
-## access to either file, you may request a copy from hdfhelp@ncsa.uiuc.edu.
-##
-## HDF5 Library Examples Makefile(.in)
-##
-top_srcdir=@top_srcdir@
-top_builddir=..
-srcdir=@srcdir@
-@COMMENCE@
-
-## Replace building CC with the just installed h5cc
-H5CC=$(bindir)/h5cc
-H5CC_PP=$(bindir)/h5pcc
-CPPFLAGS=-I. -I$(srcdir)
-CFLAGS=
-
-## These are the programs that `make all' or `make tests' will build and which
-## `make check' will run. List them in the order they should be run.
-TEST_PROGS_PARA=ph5example
-TEST_PROGS=h5_write h5_read h5_extend_write h5_chunk_read h5_compound   \
+# Makefile.in generated by automake 1.6.3 from Makefile.am.
+# @configure_input@
+
+# Copyright 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002
+# Free Software Foundation, Inc.
+# This Makefile.in is free software; the Free Software Foundation
+# gives unlimited permission to copy and/or distribute it,
+# with or without modifications, as long as this notice is preserved.
+
+# This program is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY, to the extent permitted by law; without
+# even the implied warranty of MERCHANTABILITY or FITNESS FOR A
+# PARTICULAR PURPOSE.
+
+@SET_MAKE@
+
+#
+# Copyright by the Board of Trustees of the University of Illinois.
+# All rights reserved.
+#
+# This file is part of HDF5.  The full HDF5 copyright notice, including
+# terms governing use, modification, and redistribution, is contained in
+# the files COPYING and Copyright.html.  COPYING can be found at the root
+# of the source code distribution tree; Copyright.html can be found at the
+# root level of an installed copy of the electronic HDF5 document set and
+# is linked from the top-level documents page.  It can also be found at
+# http://hdf.ncsa.uiuc.edu/HDF5/doc/Copyright.html.  If you do not have
+# access to either file, you may request a copy from hdfhelp@ncsa.uiuc.edu.
+#
+# HDF5 Library Examples Makefile(.in)
+#
+
+#------------------------------------------------------------ -*- makefile -*-
+# The following section of this makefile comes from the
+# `./config/commence' file which was generated with config.status
+# from `./config/commence.in'.
+#-----------------------------------------------------------------------------
+
+#------------------------------------------------------------ -*- makefile -*-
+# The following section of this makefile comes from the
+# `./config/conclude' file which was generated with config.status
+# from `./config/conclude.in'.
+#-----------------------------------------------------------------------------
+SHELL = @SHELL@
+
+srcdir = @srcdir@
+top_srcdir = @top_srcdir@
+VPATH = @srcdir@
+prefix = @prefix@
+exec_prefix = @exec_prefix@
+
+bindir = @bindir@
+sbindir = @sbindir@
+libexecdir = @libexecdir@
+datadir = @datadir@
+sysconfdir = @sysconfdir@
+sharedstatedir = @sharedstatedir@
+localstatedir = @localstatedir@
+libdir = @libdir@
+infodir = @infodir@
+mandir = @mandir@
+oldincludedir = /usr/include
+pkgdatadir = $(datadir)/@PACKAGE@
+pkglibdir = $(libdir)/@PACKAGE@
+pkgincludedir = $(includedir)/@PACKAGE@
+top_builddir = ..
+
+ACLOCAL = @ACLOCAL@
+AUTOCONF = @AUTOCONF@
+AUTOMAKE = @AUTOMAKE@
+AUTOHEADER = @AUTOHEADER@
+
+am__cd = CDPATH="$${ZSH_VERSION+.}$(PATH_SEPARATOR)" && cd
+INSTALL = @INSTALL@
+INSTALL_PROGRAM = @INSTALL_PROGRAM@
+INSTALL_DATA = @INSTALL_DATA@
+install_sh_DATA = $(install_sh) -c -m 644
+install_sh_PROGRAM = $(install_sh) -c
+install_sh_SCRIPT = $(install_sh) -c
+INSTALL_SCRIPT = @INSTALL_SCRIPT@
+INSTALL_HEADER = $(INSTALL_DATA)
+transform = @program_transform_name@
+NORMAL_INSTALL = :
+PRE_INSTALL = :
+POST_INSTALL = :
+NORMAL_UNINSTALL = :
+PRE_UNINSTALL = :
+POST_UNINSTALL = :
+host_alias = @host_alias@
+host_triplet = @host@
+
+EXEEXT = @EXEEXT@
+OBJEXT = @OBJEXT@
+PATH_SEPARATOR = @PATH_SEPARATOR@
+
+# Install directories that automake doesn't know about
+includedir = $(exec_prefix)/include
+ADD_PARALLEL_FILES = @ADD_PARALLEL_FILES@
+AMTAR = @AMTAR@
+AR = @AR@
+AS = @AS@
+AWK = @AWK@
+BUILD_PDB2HDF = @BUILD_PDB2HDF@
+BYTESEX = @BYTESEX@
+CC = @CC@
+CC_VERSION = @CC_VERSION@
+CONFIG_DATE = @CONFIG_DATE@
+CONFIG_MODE = @CONFIG_MODE@
+CONFIG_USER = @CONFIG_USER@
+CPPFLAGS = @CPPFLAGS@
+CXX = @CXX@
+CXXCPP = @CXXCPP@
+DEBUG_PKG = @DEBUG_PKG@
+DEFAULT_LIBS = @DEFAULT_LIBS@
+DEPDIR = @DEPDIR@
+DLLTOOL = @DLLTOOL@
+DYNAMIC_DIRS = @DYNAMIC_DIRS@
+ECHO = @ECHO@
+F77 = @F77@
+F9XSUFFIXFLAG = @F9XSUFFIXFLAG@
+FC = @FC@
+FFLAGS = @FFLAGS@
+FILTERS = @FILTERS@
+FSEARCH_DIRS = @FSEARCH_DIRS@
+GASS = @GASS@
+H5_VERSION = @H5_VERSION@
+HADDR_T = @HADDR_T@
+HDF5_INTERFACES = @HDF5_INTERFACES@
+HID_T = @HID_T@
+HL = @HL@
+HL_FOR = @HL_FOR@
+HSIZET = @HSIZET@
+HSIZE_T = @HSIZE_T@
+HSSIZE_T = @HSSIZE_T@
+INSTALL_STRIP_PROGRAM = @INSTALL_STRIP_PROGRAM@
+INSTRUMENT_LIBRARY = @INSTRUMENT_LIBRARY@
+LIBTOOL = @LIBTOOL@
+LN_S = @LN_S@
+LT_STATIC_EXEC = @LT_STATIC_EXEC@
+MPE = @MPE@
+OBJDUMP = @OBJDUMP@
+OBJECT_NAMELEN_DEFAULT_F = @OBJECT_NAMELEN_DEFAULT_F@
+PACKAGE = @PACKAGE@
+PARALLEL = @PARALLEL@
+PERL = @PERL@
+PTHREAD = @PTHREAD@
+RANLIB = @RANLIB@
+ROOT = @ROOT@
+RUNPARALLEL = @RUNPARALLEL@
+RUNSERIAL = @RUNSERIAL@
+R_INTEGER = @R_INTEGER@
+R_LARGE = @R_LARGE@
+SEARCH = @SEARCH@
+SETX = @SETX@
+SIZE_T = @SIZE_T@
+SRB = @SRB@
+SSL = @SSL@
+STATIC_SHARED = @STATIC_SHARED@
+STRIP = @STRIP@
+TESTGASS = @TESTGASS@
+TESTPARALLEL = @TESTPARALLEL@
+TESTSRB = @TESTSRB@
+TRACE_API = @TRACE_API@
+USE_FILTER_DEFLATE = @USE_FILTER_DEFLATE@
+USE_FILTER_FLETCHER32 = @USE_FILTER_FLETCHER32@
+USE_FILTER_NBIT = @USE_FILTER_NBIT@
+USE_FILTER_SHUFFLE = @USE_FILTER_SHUFFLE@
+USE_FILTER_SZIP = @USE_FILTER_SZIP@
+VERSION = @VERSION@
+am__include = @am__include@
+am__quote = @am__quote@
+install_sh = @install_sh@
+
+# Shell commands used in Makefiles
+RM = rm -f
+CP = cp
+
+# Libraries to link to while building
+LIBHDF5 = $(top_builddir)/src/libhdf5.la
+LIBH5TEST = $(top_builddir)/test/libh5test.la
+LIBH5F = $(top_builddir)/fortran/src/libhdf5_fortran.la
+LIBH5FTEST = $(top_builddir)/fortran/test/libh5test_fortran.la
+LIBH5CPP = $(top_builddir)/c++/src/libhdf5_cpp.la
+LIBH5TOOLS = $(top_builddir)/tools/lib/libh5tools.la
+LIBH5_HL = $(top_builddir)/hl/src/libhdf5_hl.la
+LIBH5F_HL = $(top_builddir)/hl/fortran/src/libhdf5hl_fortran.la
+docdir = $(exec_prefix)/doc
+
+# Scripts used to build examples
+H5CC = $(bindir)/h5cc
+H5CC_PP = $(bindir)/h5pcc
+H5FC = $(bindir)/h5fc
+H5FC_PP = $(bindir)/h5pfc
+
+# Make sure that these variables are exported to the Makefiles
+F9XMODEXT = @F9XMODEXT@
+
+@BUILD_PARALLEL_CONDITIONAL_TRUE@TEST_PROG_PARA = ph5example
+@BUILD_PARALLEL_CONDITIONAL_FALSE@TEST_PROG_PARA = 
+
+# Example programs.
+# Don't tell automake about them, because if it knew they were programs,
+# it would try to compile them instead of using the h5cc script.
+# This creates some extra work for us.
+#
+# It might be possible to use automake's COMPILE variable to have it
+# use h5cc properly (and h5fc and h5c++).
+TEST_PROG = h5_write h5_read h5_extend_write h5_chunk_read h5_compound   \
            h5_group h5_select h5_attribute h5_mount h5_reference h5_drivers
 
-## These are the files that `make clean' (and derivatives) will remove from
-## this directory.
-## *.clog are from MPE option
-CLEAN=*.h5 *.raw *.meta *.clog
 
-## List all source files here.  The list of object files will be
-## created by replacing the `.c' with a `.o'.  This list is necessary
-## for building automatic dependencies.
-TEST_SRC_PARA=ph5example.c
-TEST_SRC=h5_chunk_read.c h5_compound.c h5_extend_write.c h5_group.c     \
-         h5_read.c h5_write.c h5_select.c h5_attribute.c h5_mount.c     \
-         h5_reference.c h5_drivers.c $(TEST_SRC_PARA)
-TEST_OBJ=$(TEST_SRC:.c=.lo)
+# Tell conclude.in boilerplate when to build the examples
+EXAMPLE_PROG = $(TEST_PROG_PARA) $(TEST_PROG)
+EXTRA_PROG = $(EXAMPLE_PROG)
 
-EXAMPLE_PROGS=$(TEST_SRC)
+# Install files
+# List all file that should be installed in examples directory
+INSTALL_FILES = h5_write.c h5_read.c h5_extend_write.c h5_chunk_read.c   \
+          h5_compound.c h5_group.c h5_select.c h5_attribute.c h5_mount.c \
+          h5_reference.c h5_drivers.c ph5example.c
 
-## How to build the programs... they all depend on the hdf5 library
-$(TEST_PROGS) $(TEST_PROGS_PARA): $(LIBHDF5)
-h5_chunk_read: $(srcdir)/h5_chunk_read.c
-	@if test "X$(PARALLEL)" = "Xno"; then				\
-	  echo $(H5CC) $(CPPFLAGS) -o $@ $(srcdir)/$@.c;		\
-	  $(H5CC) $(CPPFLAGS) -o $@ $(srcdir)/$@.c;			\
-	else								\
-	  echo $(H5CC_PP) $(CPPFLAGS) -o $@ $(srcdir)/$@.c;		\
-	  $(H5CC_PP) $(CPPFLAGS) -o $@ $(srcdir)/$@.c;			\
-	fi
 
-h5_compound: $(srcdir)/h5_compound.c
-	@if test "X$(PARALLEL)" = "Xno"; then				\
-	  echo $(H5CC) $(CPPFLAGS) -o $@ $(srcdir)/$@.c;		\
-	  $(H5CC) $(CPPFLAGS) -o $@ $(srcdir)/$@.c;			\
-	else								\
-	  echo $(H5CC_PP) $(CPPFLAGS) -o $@ $(srcdir)/$@.c;		\
-	  $(H5CC_PP) $(CPPFLAGS) -o $@ $(srcdir)/$@.c;			\
-	fi
+# We need to tell automake what to clean
+CLEANFILES = *.h5 *.raw *.meta *.clog $(TEST_PROG) ph5example *.o
 
-h5_extend_write: $(srcdir)/h5_extend_write.c
-	@if test "X$(PARALLEL)" = "Xno"; then				\
-	  echo $(H5CC) $(CPPFLAGS) -o $@ $(srcdir)/$@.c;		\
-	  $(H5CC) $(CPPFLAGS) -o $@ $(srcdir)/$@.c;			\
-	else								\
-	  echo $(H5CC_PP) $(CPPFLAGS) -o $@ $(srcdir)/$@.c;		\
-	  $(H5CC_PP) $(CPPFLAGS) -o $@ $(srcdir)/$@.c;			\
-	fi
+# How to install examples
+# There are a lot of rules because automake does not know about
+# the examples programs, and does not recognize the install-examples
+# target.
+EXAMPLEDIR = $(docdir)/hdf5/examples/c
 
-h5_group: $(srcdir)/h5_group.c
-	@if test "X$(PARALLEL)" = "Xno"; then				\
-	  echo $(H5CC) $(CPPFLAGS) -o $@ $(srcdir)/$@.c;		\
-	  $(H5CC) $(CPPFLAGS) -o $@ $(srcdir)/$@.c;			\
-	else								\
-	  echo $(H5CC_PP) $(CPPFLAGS) -o $@ $(srcdir)/$@.c;		\
-	  $(H5CC_PP) $(CPPFLAGS) -o $@ $(srcdir)/$@.c;			\
-	fi
+# Automake needs to be taught how to build lib, progs, and tests targets.
+# These will be filled in automatically for the most part (e.g.,
+# lib_LIBRARIES are built for lib target), but EXTRA_LIB, EXTRA_PROG, and
+# EXTRA_TEST variables are supplied to allow the user to force targets to
+# be built at certain times. 
+LIB = $(lib_LIBRARIES) $(lib_LTLIBRARIES) $(noinst_LIBRARIES)                 \
+      $(noinst_LTLIBRARIES) $(check_LIBRARIES) $(check_LTLIBRARIES) $(EXTRA_LIB)
 
-h5_write: $(srcdir)/h5_write.c
-	@if test "X$(PARALLEL)" = "Xno"; then				\
-	  echo $(H5CC) $(CPPFLAGS) -o $@ $(srcdir)/$@.c;		\
-	  $(H5CC) $(CPPFLAGS) -o $@ $(srcdir)/$@.c;			\
-	else								\
-	  echo $(H5CC_PP) $(CPPFLAGS) -o $@ $(srcdir)/$@.c;		\
-	  $(H5CC_PP) $(CPPFLAGS) -o $@ $(srcdir)/$@.c;			\
-	fi
+PROGS = $(bin_PROGRAMS) $(bin_SCRIPTS) $(noinst_PROGRAMS) $(noinst_SCRIPTS)   \
+        $(EXTRA_PROG)
 
-h5_read: $(srcdir)/h5_read.c
-	@if test "X$(PARALLEL)" = "Xno"; then				\
-	  echo $(H5CC) $(CPPFLAGS) -o $@ $(srcdir)/$@.c;		\
-	  $(H5CC) $(CPPFLAGS) -o $@ $(srcdir)/$@.c;			\
-	else								\
-	  echo $(H5CC_PP) $(CPPFLAGS) -o $@ $(srcdir)/$@.c;		\
-	  $(H5CC_PP) $(CPPFLAGS) -o $@ $(srcdir)/$@.c;			\
-	fi
+TESTS = $(check_PROGRAMS) $(check_SCRIPTS) $(EXTRA_TEST) 
+subdir = examples
+mkinstalldirs = $(SHELL) $(top_srcdir)/bin/mkinstalldirs
+CONFIG_HEADER = $(top_builddir)/src/H5config.h
+CONFIG_CLEAN_FILES =
+DIST_SOURCES =
+DIST_COMMON = Makefile.am Makefile.in
+all: all-am
 
-h5_select: $(srcdir)/h5_select.c
-	@if test "X$(PARALLEL)" = "Xno"; then				\
-	  echo $(H5CC) $(CPPFLAGS) -o $@ $(srcdir)/$@.c;		\
-	  $(H5CC) $(CPPFLAGS) -o $@ $(srcdir)/$@.c;			\
-	else								\
-	  echo $(H5CC_PP) $(CPPFLAGS) -o $@ $(srcdir)/$@.c;		\
-	  $(H5CC_PP) $(CPPFLAGS) -o $@ $(srcdir)/$@.c;			\
-	fi
+.SUFFIXES:
+$(srcdir)/Makefile.in:  Makefile.am $(top_srcdir)/config/commence.am $(top_srcdir)/config/conclude.am $(top_srcdir)/configure.in $(ACLOCAL_M4)
+	cd $(top_srcdir) && \
+	  $(AUTOMAKE) --foreign  examples/Makefile
+Makefile:  $(srcdir)/Makefile.in  $(top_builddir)/config.status
+	cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@ $(am__depfiles_maybe)
 
-h5_attribute: $(srcdir)/h5_attribute.c
-	@if test "X$(PARALLEL)" = "Xno"; then				\
-	  echo $(H5CC) $(CPPFLAGS) -o $@ $(srcdir)/$@.c;		\
-	  $(H5CC) $(CPPFLAGS) -o $@ $(srcdir)/$@.c;			\
-	else								\
-	  echo $(H5CC_PP) $(CPPFLAGS) -o $@ $(srcdir)/$@.c;		\
-	  $(H5CC_PP) $(CPPFLAGS) -o $@ $(srcdir)/$@.c;			\
-	fi
+mostlyclean-libtool:
+	-rm -f *.lo
 
-h5_mount: $(srcdir)/h5_mount.c
-	@if test "X$(PARALLEL)" = "Xno"; then				\
-	  echo $(H5CC) $(CPPFLAGS) -o $@ $(srcdir)/$@.c;		\
-	  $(H5CC) $(CPPFLAGS) -o $@ $(srcdir)/$@.c;			\
-	else								\
-	  echo $(H5CC_PP) $(CPPFLAGS) -o $@ $(srcdir)/$@.c;		\
-	  $(H5CC_PP) $(CPPFLAGS) -o $@ $(srcdir)/$@.c;			\
-	fi
+clean-libtool:
+	-rm -rf .libs _libs
 
-h5_reference: $(srcdir)/h5_reference.c
-	@if test "X$(PARALLEL)" = "Xno"; then				\
-	  echo $(H5CC) $(CPPFLAGS) -o $@ $(srcdir)/$@.c;		\
-	  $(H5CC) $(CPPFLAGS) -o $@ $(srcdir)/$@.c;			\
-	else								\
-	  echo $(H5CC_PP) $(CPPFLAGS) -o $@ $(srcdir)/$@.c;		\
-	  $(H5CC_PP) $(CPPFLAGS) -o $@ $(srcdir)/$@.c;			\
-	fi
+distclean-libtool:
+	-rm -f libtool
+uninstall-info-am:
+tags: TAGS
+TAGS:
 
-h5_drivers: $(srcdir)/h5_drivers.c
-	@if test "X$(PARALLEL)" = "Xno"; then				\
-	  echo $(H5CC) $(CPPFLAGS) -o $@ $(srcdir)/$@.c;		\
-	  $(H5CC) $(CPPFLAGS) -o $@ $(srcdir)/$@.c;			\
-	else								\
-	  echo $(H5CC_PP) $(CPPFLAGS) -o $@ $(srcdir)/$@.c;		\
-	  $(H5CC_PP) $(CPPFLAGS) -o $@ $(srcdir)/$@.c;			\
-	fi
+DISTFILES = $(DIST_COMMON) $(DIST_SOURCES) $(TEXINFOS) $(EXTRA_DIST)
 
-ph5example: $(srcdir)/ph5example.c
-	@if test "X$(PARALLEL)" = "Xno"; then				\
-	  echo $(H5CC) $(CPPFLAGS) -o $@ $(srcdir)/$@.c;		\
-	  $(H5CC) $(CPPFLAGS) -o $@ $(srcdir)/$@.c;			\
-	else								\
-	  echo $(H5CC_PP) $(CPPFLAGS) -o $@ $(srcdir)/$@.c;		\
-	  $(H5CC_PP) $(CPPFLAGS) -o $@ $(srcdir)/$@.c;			\
+top_distdir = ..
+distdir = $(top_distdir)/$(PACKAGE)-$(VERSION)
+
+distdir: $(DISTFILES)
+	@list='$(DISTFILES)'; for file in $$list; do \
+	  if test -f $$file || test -d $$file; then d=.; else d=$(srcdir); fi; \
+	  dir=`echo "$$file" | sed -e 's,/[^/]*$$,,'`; \
+	  if test "$$dir" != "$$file" && test "$$dir" != "."; then \
+	    dir="/$$dir"; \
+	    $(mkinstalldirs) "$(distdir)$$dir"; \
+	  else \
+	    dir=''; \
+	  fi; \
+	  if test -d $$d/$$file; then \
+	    if test -d $(srcdir)/$$file && test $$d != $(srcdir); then \
+	      cp -pR $(srcdir)/$$file $(distdir)$$dir || exit 1; \
+	    fi; \
+	    cp -pR $$d/$$file $(distdir)$$dir || exit 1; \
+	  else \
+	    test -f $(distdir)/$$file \
+	    || cp -p $$d/$$file $(distdir)/$$file \
+	    || exit 1; \
+	  fi; \
+	done
+check-am: all-am
+	$(MAKE) $(AM_MAKEFLAGS) check-TESTS
+check: check-am
+all-am: Makefile all-local
+
+installdirs:
+
+install: install-am
+install-exec: install-exec-am
+install-data: install-data-am
+uninstall: uninstall-am
+
+install-am: all-am
+	@$(MAKE) $(AM_MAKEFLAGS) install-exec-am install-data-am
+
+installcheck: installcheck-am
+install-strip:
+	$(MAKE) $(AM_MAKEFLAGS) INSTALL_PROGRAM="$(INSTALL_STRIP_PROGRAM)" \
+	  INSTALL_STRIP_FLAG=-s \
+	  `test -z '$(STRIP)' || \
+	    echo "INSTALL_PROGRAM_ENV=STRIPPROG='$(STRIP)'"` install
+mostlyclean-generic:
+
+clean-generic:
+	-test -z "$(CLEANFILES)" || rm -f $(CLEANFILES)
+
+distclean-generic:
+	-rm -f Makefile $(CONFIG_CLEAN_FILES)
+
+maintainer-clean-generic:
+	@echo "This command is intended for maintainers to use"
+	@echo "it deletes files that may require special tools to rebuild."
+clean: clean-am
+
+clean-am: clean-generic clean-libtool mostlyclean-am
+
+distclean: distclean-am
+
+distclean-am: clean-am distclean-generic distclean-libtool
+
+dvi: dvi-am
+
+dvi-am:
+
+info: info-am
+
+info-am:
+
+install-data-am: install-data-local
+
+install-exec-am:
+
+install-info: install-info-am
+
+install-man:
+
+installcheck-am: installcheck-local
+
+maintainer-clean: maintainer-clean-am
+
+maintainer-clean-am: distclean-am maintainer-clean-generic
+
+mostlyclean: mostlyclean-am
+
+mostlyclean-am: mostlyclean-generic mostlyclean-libtool
+
+uninstall-am: uninstall-info-am uninstall-local
+
+.PHONY: all all-am all-local check check-TESTS check-am clean \
+	clean-generic clean-libtool distclean distclean-generic \
+	distclean-libtool distdir dvi dvi-am info info-am install \
+	install-am install-data install-data-am install-data-local \
+	install-exec install-exec-am install-info install-info-am \
+	install-man install-strip installcheck installcheck-am \
+	installcheck-local installdirs maintainer-clean \
+	maintainer-clean-generic mostlyclean mostlyclean-generic \
+	mostlyclean-libtool uninstall uninstall-am uninstall-info-am \
+	uninstall-local
+
+
+# Let automake worry about Makefiles and configure components being up-to-
+# date.
+#
+#
+# The following rules insure that the Makefile is up-to-date by rerunning
+# various autoconf components (although not all versions of make assume
+# that the makefile is implicitly a target).  We use time stamp files to
+# keep track of the most recent update of H5config.h.in and H5config.h
+# because autoheader and config.status don't update the modification time
+# if the contents don't change.
+# Invoke it by "gmake reconfigure".
+#
+# Graphically, the dependencies are:
+#
+#                       configure.in
+#                           |  |
+#         +-----------------+  +------------+
+#         |                                 |
+#      stamp1                           configure
+#   (H5config.h.in)                         |
+#       |  |                                |
+#       |  +---------------+    +-----------+
+#       |                  |    |
+#       |               config.status
+#       |                     |
+#       |  +------------------+
+#       |  |
+#      stamp2
+#    (H5config.h)                   Makefile.in et al
+#         |                                 |
+#         +------------------+  +-----------+
+#                            |  |
+#                          Makefile
+#
+# A side effect of updating stamp1 is to generate H5config.h.in and a
+# side effect of updating stamp2 is to generate H5config.h.  When using
+# a version of make that doesn't treat the makefile as the initial target
+# the user may want to occassionally type `make Makefile' in any source
+# directory.
+# The `Makefile' target has been renamed to `reconfigure' so that the
+# autoconf and make depend processes do not start up automatically.
+# One must do `make reconfigure' explicitedly to start the process.
+# (When srcdir is used and if more than one machines are running,
+# this automatic Makefile/autoconf can get things unstable.)
+#
+#STAMP1=$(top_builddir)/config/stamp1
+#STAMP2=$(top_builddir)/config/stamp2
+
+#MAKEFILE_PARTS=$(srcdir)/Makefile.in            \
+#               $(top_srcdir)/config/commence.am \
+#               $(top_srcdir)/config/conclude.am
+
+#$(STAMP1): $(top_srcdir)/configure.in
+#	touch $(STAMP1)
+#	-cd $(top_srcdir); autoheader
+
+#$(STAMP2): $(STAMP1) $(top_builddir)/config.status
+#	touch $(STAMP2)
+#	-cd $(top_builddir); \
+#	   CONFIG_FILES= CONFIG_HEADERS=src/H5config.h ./config.status
+
+# Automake supplies a rule to generate configure
+
+#$(top_builddir)/config.status: $(top_srcdir)/configure $(STAMP1)
+#	-cd $(top_builddir); ./config.status --recheck
+
+# rerun the autoconf process if any configure components have changed. 
+#reconfigure: $(MAKEFILE_PARTS) $(STAMP2)
+#	-cd $(top_builddir); CONFIG_HEADERS= ./config.status
+#	@for sub in @subdirs@ dummy; do                                 \
+#	  if test $$sub != dummy; then                                  \
+#	    -cd $$sub; $(MAKE) reconfigure;                             \
+#	  fi;                                                           \
+#	done;
+
+#-----------------------------------------------------------------------------
+# The following section of this makefile comes from the middle of
+# `Makefile.am' from this directory.
+# It was generated by running automake on `Makefile.am' to create
+# `Makefile.in', then running `config.status' to create this Makefile.
+#-----------------------------------------------------------------------------
+
+# Additional dependencies for each program are listed below.
+$(EXTRA_PROG): $(LIBHDF5)
+@BUILD_PARALLEL_CONDITIONAL_TRUE@	$(H5CC_PP) $(CFLAGS) -o $@ $(srcdir)/$@.c;
+@BUILD_PARALLEL_CONDITIONAL_FALSE@	$(H5CC) $(CFLAGS) -o $@ $(srcdir)/$@.c;
+
+$(EXAMPLEDIR):
+	-$(top_srcdir)/bin/mkdirs $@
+
+install-data-local:
+	$(MAKE) install-examples
+uninstall-local:
+	$(MAKE) uninstall-examples
+
+# We want to install the source files, not the examples themselves.  Add '.c' to
+# each example to get its source.  This is a bit kludgy.
+install-examples: $(EXAMPLEDIR) $(INSTALL_FILES)
+	@for f in X $(INSTALL_FILES); do                                     \
+	  if test $$f != X; then                                             \
+	    (set -x; $(INSTALL) $(top_srcdir)/examples/$$f $(EXAMPLEDIR)/. || exit 1);\
+	  fi;                                                                \
+	done
+
+uninstall-examples:
+	@if test -n "$(INSTALL_FILES)" -a -d $(EXAMPLEDIR); then                                 \
+	  set -x; cd $(EXAMPLEDIR) && $(RM) $(INSTALL_FILES).c;              \
 	fi
 
+check-install:
+	$(MAKE) installcheck
+installcheck-local:
+	$(MAKE) check
+
+# List dependencies for each program.  Normally, automake would take
+# care of this for us, but if we tell automake about the programs it
+# will try to build them with the normal C compiler, not h5cc.  This is
+# an inelegant way of solving the problem.
+# All programs share the same build rule and a dependency on the main hdf5
+# library above.
+h5_chunk_read: $(srcdir)/h5_chunk_read.c
+h5_compound: $(srcdir)/h5_compound.c
+h5_extend_write: $(srcdir)/h5_extend_write.c
+h5_group: $(srcdir)/h5_group.c
+h5_write: $(srcdir)/h5_write.c
+h5_read: $(srcdir)/h5_read.c
+h5_select: $(srcdir)/h5_select.c
+h5_attribute: $(srcdir)/h5_attribute.c
+h5_mount: $(srcdir)/h5_mount.c
+h5_reference: $(srcdir)/h5_reference.c
+h5_drivers: $(srcdir)/h5_drivers.c
+ph5example: $(srcdir)/ph5example.c
 h5_dtransform: $(srcdir)/h5_dtransform.c
-	@if test "X$(PARALLEL)" = "Xno"; then				\
-	  echo $(H5CC) $(CPPFLAGS) -o $@ $(srcdir)/$@.c;		\
-	  $(H5CC) $(CPPFLAGS) -o $@ $(srcdir)/$@.c;			\
-	else								\
-	  echo $(H5CC_PP) $(CPPFLAGS) -o $@ $(srcdir)/$@.c;		\
-	  $(H5CC_PP) $(CPPFLAGS) -o $@ $(srcdir)/$@.c;			\
+
+# lib/progs/tests targets recurse into subdirectories. build-* targets
+# build files in this directory.
+build-lib: $(LIB)
+build-progs: $(LIB) $(PROGS)
+build-tests: $(LIB) $(PROGS) $(TESTS)
+
+lib progs tests ::
+	@$(MAKE) build-$@ || exit 1;                                          \
+	for d in X $(SUBDIRS); do                                             \
+	    if test $$d != X -a $$d != .; then                                \
+	        (set -x; cd $$d && $(MAKE) $@) || exit 1;                     \
+	    fi;                                                               \
+	done
+
+# Tell Automake to build tests when the user types `make all' (this is
+# not its default behavior).  Also build EXTRA_LIB and EXTRA_PROG since
+# Automake won't build them automatically, either.
+all-local: $(EXTRA_LIB) $(EXTRA_PROG) $(TESTS)
+
+# make install-doc doesn't do anything outside of doc directory, but
+# Makefiles should recognize it.
+install-doc uninstall-doc:
+	@echo "Nothing to be done."
+
+# Run each test in order, passing $(TEST_FLAGS) to the program.
+# Since tests are done in a shell loop, "make -i" does apply inside it.
+# Set HDF5_Make_Ignore to a non-blank string to ignore errors inside the loop.
+# The timestamps give a rough idea how much time the tests use.
+#
+# Note that targets in TESTS (defined above) will be built when the user
+# types 'make tests' or 'make check', but only programs in TEST_PROG,
+# TEST_PROG_PARA, or TEST_SCRIPT will actually be executed.
+check-TESTS: test
+
+test _test: $(PROGS) $(TESTS)
+	@if test -n "$(TEST_PROG)$(TEST_PROG_PARA)$(TEST_SCRIPT)"; then      \
+	   echo "===Tests in `echo ${PWD} | sed -e s:.*/::` begin `date`==="; \
+        fi
+	@for test in $(TEST_PROG) dummy; do                                  \
+	   if test $$test != dummy; then                                      \
+	      echo "============================";                            \
+	      if test "X$(HDF_FORTRAN)" = "Xyes"; then                        \
+	         echo "Fortran API: Testing $$test $(TEST_FLAGS)";            \
+	      elif test "X$(HDF_CXX)" = "Xyes"; then                          \
+	         echo "C++ API: Testing $$test $(TEST_FLAGS)";                \
+	      else                                                            \
+	         echo "Testing $$test $(TEST_FLAGS)";                         \
+	      fi;                                                             \
+	      echo "============================";                            \
+	      srcdir="$(srcdir)"                                              \
+	         $(RUNTEST) ./$$test $(TEST_FLAGS) ||                         \
+	         (test $$HDF5_Make_Ignore && echo "*** Error ignored") ||     \
+	         break;                                                       \
+	      echo "";                                                        \
+	   fi;                                                                \
+	done;                                                                 \
+	test $$test = dummy || false
+	@if test -n "$(TEST_PROG_PARA)"; then                                \
+	    echo "**** Hint ****";                                            \
+	    echo "Parallel test files reside in the current directory"        \
+	         "by default.";                                               \
+	    echo "Set HDF5_PARAPREFIX to use another directory. E.g.,";       \
+	    echo "    HDF5_PARAPREFIX=/PFS/user/me";                          \
+	    echo "    export HDF5_PARAPREFIX";                                \
+	    echo "    make check";                                            \
+	    echo "**** end of Hint ****";                                     \
+	fi
+	@for test in $(TEST_PROG_PARA) dummy; do                             \
+	   if test $$test != dummy; then                                      \
+	      echo "============================";                            \
+	      if test "X$(HDF_FORTRAN)" = "Xyes"; then                        \
+	         echo "Fortran API: Testing $$test $(TEST_FLAGS)";            \
+	      elif test "X$(HDF_CXX)" = "Xyes"; then                          \
+	         echo "C++ API: Testing $$test $(TEST_FLAGS)";                \
+	      else                                                            \
+	         echo "Testing $$test $(TEST_FLAGS)";                         \
+	      fi;                                                             \
+	      echo "============================";                            \
+	      srcdir="$(srcdir)"                                              \
+	         $(RUNPARALLEL) ./$$test $(TEST_FLAGS) ||                     \
+	         (test $$HDF5_Make_Ignore && echo "*** Error ignored") ||     \
+	         break;                                                       \
+	      echo "";                                                        \
+	   fi;                                                                \
+	done;                                                                 \
+	test $$test = dummy || false
+	@for test in $(TEST_SCRIPT) dummy; do                                \
+	   if test $$test != dummy; then                                      \
+	      echo "============================";                            \
+	      if test "X$(HDF_FORTRAN)" = "Xyes"; then                        \
+	         echo "Fortran API: Testing $$test $(TEST_FLAGS)";            \
+	      elif test "X$(HDF_CXX)" = "Xyes"; then                          \
+	         echo "C++ API: Testing $$test $(TEST_FLAGS)";                \
+	      else                                                            \
+	         echo "Testing $$test $(TEST_FLAGS)";                         \
+	      fi;                                                             \
+	      echo "============================";                            \
+	      RUNSERIAL="$(RUNSERIAL)" RUNPARALLEL="$(RUNPARALLEL)"           \
+	         srcdir="$(srcdir)"                                           \
+	         /bin/sh $$test $(TEST_FLAGS) ||                              \
+	         (test $$HDF5_Make_Ignore && echo "*** Error ignored") ||     \
+	         break;                                                       \
+	      echo "";                                                        \
+	  fi;                                                                 \
+	done;                                                                 \
+	test $$test = dummy || false
+	@if test -n "$(TEST_PROG)$(TEST_PROG_PARA)$(TEST_SCRIPT)"; then      \
+	    echo "===Tests in `echo ${PWD} | sed -e s:.*/::` ended `date`===";\
 	fi
 
-@CONCLUDE@
+# Run test with different Virtual File Driver
+check-vfd:
+	@for vfd in $(VFD_LIST) dummy; do                                     \
+	    if test $$vfd != dummy; then                                      \
+	        echo "============================";                          \
+	        echo "Testing Virtual File Driver $$vfd";                     \
+	        echo "============================";                          \
+	        HDF5_DRIVER=$$vfd $(MAKE) check;                              \
+	    fi;                                                               \
+	done
+# Tell versions [3.59,3.63) of GNU make to not export all variables.
+# Otherwise a system limit (for SysV at least) may be exceeded.
+.NOEXPORT: