[svn-r17345] Purpose:

    Updating autotools

Description:

    Installed new autotools and used them to reconfigure HDF5.

    - Automake upgraded to 1.11
    - Autoconf upgraded to 2.64
    - bin/reconfigure script edited to use new versions (on jam), and
      run to generate new configure script and Makefile.in's.
    - configure.in script edited to add "_cv_" to all AC_CACHE_VAL strings
      (in order to comply with new autoconf standard).
    
Tested:

    Tested on machines jam, smirom, liberty, linew.
    Tested w/ features c++, fortran, parallel.
    Tested w/ compilers gcc, pgcc, icc.

    Further testing via Daily Tests should catch any other outliers. Upon
    passing DT's, I'll propogate the new tools into 1.8, hdf4, et cetera.

1 files changed, 102 insertions, 32 deletions

diff --git a/fortran/Makefile.in b/fortran/Makefile.in
index adf9381..3cbf4ab 100644
--- a/fortran/Makefile.in
+++ b/fortran/Makefile.in
@@ -1,8 +1,9 @@
-# Makefile.in generated by automake 1.10.2 from Makefile.am.
+# Makefile.in generated by automake 1.11 from Makefile.am.
 # @configure_input@
 
 # Copyright (C) 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002,
-# 2003, 2004, 2005, 2006, 2007, 2008  Free Software Foundation, Inc.
+# 2003, 2004, 2005, 2006, 2007, 2008, 2009  Free Software Foundation,
+# Inc.
 # This Makefile.in is free software; the Free Software Foundation
 # gives unlimited permission to copy and/or distribute it,
 # with or without modifications, as long as this notice is preserved.
@@ -36,8 +37,9 @@
 #
 VPATH = @srcdir@
 pkgdatadir = $(datadir)/@PACKAGE@
-pkglibdir = $(libdir)/@PACKAGE@
 pkgincludedir = $(includedir)/@PACKAGE@
+pkglibdir = $(libdir)/@PACKAGE@
+pkglibexecdir = $(libexecdir)/@PACKAGE@
 am__cd = CDPATH="$${ZSH_VERSION+.}$(PATH_SEPARATOR)" && cd
 install_sh_DATA = $(install_sh) -c -m 644
 install_sh_PROGRAM = $(install_sh) -c
@@ -64,6 +66,7 @@ am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
 mkinstalldirs = $(SHELL) $(top_srcdir)/bin/mkinstalldirs
 CONFIG_HEADER = $(top_builddir)/src/H5config.h
 CONFIG_CLEAN_FILES =
+CONFIG_CLEAN_VPATH_FILES =
 SOURCES =
 DIST_SOURCES =
 RECURSIVE_TARGETS = all-recursive check-recursive dvi-recursive \
@@ -75,9 +78,39 @@ RECURSIVE_TARGETS = all-recursive check-recursive dvi-recursive \
 	ps-recursive uninstall-recursive
 RECURSIVE_CLEAN_TARGETS = mostlyclean-recursive clean-recursive	\
   distclean-recursive maintainer-clean-recursive
+AM_RECURSIVE_TARGETS = $(RECURSIVE_TARGETS:-recursive=) \
+	$(RECURSIVE_CLEAN_TARGETS:-recursive=) tags TAGS ctags CTAGS \
+	distdir
 ETAGS = etags
 CTAGS = ctags
+am__tty_colors = \
+red=; grn=; lgn=; blu=; std=
 DISTFILES = $(DIST_COMMON) $(DIST_SOURCES) $(TEXINFOS) $(EXTRA_DIST)
+am__relativize = \
+  dir0=`pwd`; \
+  sed_first='s,^\([^/]*\)/.*$$,\1,'; \
+  sed_rest='s,^[^/]*/*,,'; \
+  sed_last='s,^.*/\([^/]*\)$$,\1,'; \
+  sed_butlast='s,/*[^/]*$$,,'; \
+  while test -n "$$dir1"; do \
+    first=`echo "$$dir1" | sed -e "$$sed_first"`; \
+    if test "$$first" != "."; then \
+      if test "$$first" = ".."; then \
+        dir2=`echo "$$dir0" | sed -e "$$sed_last"`/"$$dir2"; \
+        dir0=`echo "$$dir0" | sed -e "$$sed_butlast"`; \
+      else \
+        first2=`echo "$$dir2" | sed -e "$$sed_first"`; \
+        if test "$$first2" = "$$first"; then \
+          dir2=`echo "$$dir2" | sed -e "$$sed_rest"`; \
+        else \
+          dir2="../$$dir2"; \
+        fi; \
+        dir0="$$dir0"/"$$first"; \
+      fi; \
+    fi; \
+    dir1=`echo "$$dir1" | sed -e "$$sed_rest"`; \
+  done; \
+  reldir="$$dir2"
 ACLOCAL = /home1/packages/automake/automake-1.9.6/bin/aclocal-1.9 -I /afs/ncsa/projects/hdf/packages/libtool_1.5.14/Linux_2.4/share/aclocal
 ADD_PARALLEL_FILES = @ADD_PARALLEL_FILES@
 AMTAR = @AMTAR@
@@ -191,6 +224,7 @@ PACKAGE_BUGREPORT = @PACKAGE_BUGREPORT@
 PACKAGE_NAME = @PACKAGE_NAME@
 PACKAGE_STRING = @PACKAGE_STRING@
 PACKAGE_TARNAME = @PACKAGE_TARNAME@
+PACKAGE_URL = @PACKAGE_URL@
 PACKAGE_VERSION = @PACKAGE_VERSION@
 PARALLEL = @PARALLEL@
 PATH_SEPARATOR = @PATH_SEPARATOR@
@@ -282,6 +316,7 @@ sharedstatedir = @sharedstatedir@
 srcdir = @srcdir@
 sysconfdir = @sysconfdir@
 target_alias = @target_alias@
+top_build_prefix = @top_build_prefix@
 top_builddir = @top_builddir@
 top_srcdir = @top_srcdir@
 
@@ -361,9 +396,9 @@ $(srcdir)/Makefile.in: @MAINTAINER_MODE_TRUE@ $(srcdir)/Makefile.am $(top_srcdir
 	      exit 1;; \
 	  esac; \
 	done; \
-	echo ' cd $(top_srcdir) && $(AUTOMAKE) --foreign  fortran/Makefile'; \
-	cd $(top_srcdir) && \
-	  $(AUTOMAKE) --foreign  fortran/Makefile
+	echo ' cd $(top_srcdir) && $(AUTOMAKE) --foreign fortran/Makefile'; \
+	$(am__cd) $(top_srcdir) && \
+	  $(AUTOMAKE) --foreign fortran/Makefile
 .PRECIOUS: Makefile
 Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
 	@case '$?' in \
@@ -381,6 +416,7 @@ $(top_srcdir)/configure: @MAINTAINER_MODE_TRUE@ $(am__configure_deps)
 	cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
 $(ACLOCAL_M4): @MAINTAINER_MODE_TRUE@ $(am__aclocal_m4_deps)
 	cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
+$(am__aclocal_m4_deps):
 
 mostlyclean-libtool:
 	-rm -f *.lo
@@ -412,7 +448,7 @@ $(RECURSIVE_TARGETS):
 	  else \
 	    local_target="$$target"; \
 	  fi; \
-	  (cd $$subdir && $(MAKE) $(AM_MAKEFLAGS) $$local_target) \
+	  ($(am__cd) $$subdir && $(MAKE) $(AM_MAKEFLAGS) $$local_target) \
 	  || eval $$failcom; \
 	done; \
 	if test "$$dot_seen" = "no"; then \
@@ -446,16 +482,16 @@ $(RECURSIVE_CLEAN_TARGETS):
 	  else \
 	    local_target="$$target"; \
 	  fi; \
-	  (cd $$subdir && $(MAKE) $(AM_MAKEFLAGS) $$local_target) \
+	  ($(am__cd) $$subdir && $(MAKE) $(AM_MAKEFLAGS) $$local_target) \
 	  || eval $$failcom; \
 	done && test -z "$$fail"
 tags-recursive:
 	list='$(SUBDIRS)'; for subdir in $$list; do \
-	  test "$$subdir" = . || (cd $$subdir && $(MAKE) $(AM_MAKEFLAGS) tags); \
+	  test "$$subdir" = . || ($(am__cd) $$subdir && $(MAKE) $(AM_MAKEFLAGS) tags); \
 	done
 ctags-recursive:
 	list='$(SUBDIRS)'; for subdir in $$list; do \
-	  test "$$subdir" = . || (cd $$subdir && $(MAKE) $(AM_MAKEFLAGS) ctags); \
+	  test "$$subdir" = . || ($(am__cd) $$subdir && $(MAKE) $(AM_MAKEFLAGS) ctags); \
 	done
 
 ID: $(HEADERS) $(SOURCES) $(LISP) $(TAGS_FILES)
@@ -470,7 +506,7 @@ tags: TAGS
 
 TAGS: tags-recursive $(HEADERS) $(SOURCES)  $(TAGS_DEPENDENCIES) \
 		$(TAGS_FILES) $(LISP)
-	tags=; \
+	set x; \
 	here=`pwd`; \
 	if ($(ETAGS) --etags-include --version) >/dev/null 2>&1; then \
 	  include_option=--etags-include; \
@@ -482,7 +518,7 @@ TAGS: tags-recursive $(HEADERS) $(SOURCES)  $(TAGS_DEPENDENCIES) \
 	list='$(SUBDIRS)'; for subdir in $$list; do \
 	  if test "$$subdir" = .; then :; else \
 	    test ! -f $$subdir/TAGS || \
-	      tags="$$tags $$include_option=$$here/$$subdir/TAGS"; \
+	      set "$$@" "$$include_option=$$here/$$subdir/TAGS"; \
 	  fi; \
 	done; \
 	list='$(SOURCES) $(HEADERS)  $(LISP) $(TAGS_FILES)'; \
@@ -491,29 +527,34 @@ TAGS: tags-recursive $(HEADERS) $(SOURCES)  $(TAGS_DEPENDENCIES) \
 	  done | \
 	  $(AWK) '{ files[$$0] = 1; nonempty = 1; } \
 	      END { if (nonempty) { for (i in files) print i; }; }'`; \
-	if test -z "$(ETAGS_ARGS)$$tags$$unique"; then :; else \
+	shift; \
+	if test -z "$(ETAGS_ARGS)$$*$$unique"; then :; else \
 	  test -n "$$unique" || unique=$$empty_fix; \
-	  $(ETAGS) $(ETAGSFLAGS) $(AM_ETAGSFLAGS) $(ETAGS_ARGS) \
-	    $$tags $$unique; \
+	  if test $$# -gt 0; then \
+	    $(ETAGS) $(ETAGSFLAGS) $(AM_ETAGSFLAGS) $(ETAGS_ARGS) \
+	      "$$@" $$unique; \
+	  else \
+	    $(ETAGS) $(ETAGSFLAGS) $(AM_ETAGSFLAGS) $(ETAGS_ARGS) \
+	      $$unique; \
+	  fi; \
 	fi
 ctags: CTAGS
 CTAGS: ctags-recursive $(HEADERS) $(SOURCES)  $(TAGS_DEPENDENCIES) \
 		$(TAGS_FILES) $(LISP)
-	tags=; \
 	list='$(SOURCES) $(HEADERS)  $(LISP) $(TAGS_FILES)'; \
 	unique=`for i in $$list; do \
 	    if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \
 	  done | \
 	  $(AWK) '{ files[$$0] = 1; nonempty = 1; } \
 	      END { if (nonempty) { for (i in files) print i; }; }'`; \
-	test -z "$(CTAGS_ARGS)$$tags$$unique" \
+	test -z "$(CTAGS_ARGS)$$unique" \
 	  || $(CTAGS) $(CTAGSFLAGS) $(AM_CTAGSFLAGS) $(CTAGS_ARGS) \
-	     $$tags $$unique
+	     $$unique
 
 GTAGS:
 	here=`$(am__cd) $(top_builddir) && pwd` \
-	  && cd $(top_srcdir) \
-	  && gtags -i $(GTAGS_ARGS) $$here
+	  && $(am__cd) $(top_srcdir) \
+	  && gtags -i $(GTAGS_ARGS) "$$here"
 
 distclean-tags:
 	-rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
@@ -534,29 +575,44 @@ distdir: $(DISTFILES)
 	  if test -f $$file || test -d $$file; then d=.; else d=$(srcdir); fi; \
 	  if test -d $$d/$$file; then \
 	    dir=`echo "/$$file" | sed -e 's,/[^/]*$$,,'`; \
+	    if test -d "$(distdir)/$$file"; then \
+	      find "$(distdir)/$$file" -type d ! -perm -700 -exec chmod u+rwx {} \;; \
+	    fi; \
 	    if test -d $(srcdir)/$$file && test $$d != $(srcdir); then \
-	      cp -pR $(srcdir)/$$file $(distdir)$$dir || exit 1; \
+	      cp -fpR $(srcdir)/$$file "$(distdir)$$dir" || exit 1; \
+	      find "$(distdir)/$$file" -type d ! -perm -700 -exec chmod u+rwx {} \;; \
 	    fi; \
-	    cp -pR $$d/$$file $(distdir)$$dir || exit 1; \
+	    cp -fpR $$d/$$file "$(distdir)$$dir" || exit 1; \
 	  else \
-	    test -f $(distdir)/$$file \
-	    || cp -p $$d/$$file $(distdir)/$$file \
+	    test -f "$(distdir)/$$file" \
+	    || cp -p $$d/$$file "$(distdir)/$$file" \
 	    || exit 1; \
 	  fi; \
 	done
-	list='$(DIST_SUBDIRS)'; for subdir in $$list; do \
+	@list='$(DIST_SUBDIRS)'; for subdir in $$list; do \
 	  if test "$$subdir" = .; then :; else \
 	    test -d "$(distdir)/$$subdir" \
 	    || $(MKDIR_P) "$(distdir)/$$subdir" \
 	    || exit 1; \
-	    distdir=`$(am__cd) $(distdir) && pwd`; \
-	    top_distdir=`$(am__cd) $(top_distdir) && pwd`; \
-	    (cd $$subdir && \
+	  fi; \
+	done
+	@list='$(DIST_SUBDIRS)'; for subdir in $$list; do \
+	  if test "$$subdir" = .; then :; else \
+	    dir1=$$subdir; dir2="$(distdir)/$$subdir"; \
+	    $(am__relativize); \
+	    new_distdir=$$reldir; \
+	    dir1=$$subdir; dir2="$(top_distdir)"; \
+	    $(am__relativize); \
+	    new_top_distdir=$$reldir; \
+	    echo " (cd $$subdir && $(MAKE) $(AM_MAKEFLAGS) top_distdir="$$new_top_distdir" distdir="$$new_distdir" \\"; \
+	    echo "     am__remove_distdir=: am__skip_length_check=: am__skip_mode_fix=: distdir)"; \
+	    ($(am__cd) $$subdir && \
 	      $(MAKE) $(AM_MAKEFLAGS) \
-	        top_distdir="$$top_distdir" \
-	        distdir="$$distdir/$$subdir" \
+	        top_distdir="$$new_top_distdir" \
+	        distdir="$$new_distdir" \
 		am__remove_distdir=: \
 		am__skip_length_check=: \
+		am__skip_mode_fix=: \
 	        distdir) \
 	      || exit 1; \
 	  fi; \
@@ -587,6 +643,7 @@ clean-generic:
 
 distclean-generic:
 	-test -z "$(CONFIG_CLEAN_FILES)" || rm -f $(CONFIG_CLEAN_FILES)
+	-test . = "$(srcdir)" || test -z "$(CONFIG_CLEAN_VPATH_FILES)" || rm -f $(CONFIG_CLEAN_VPATH_FILES)
 
 maintainer-clean-generic:
 	@echo "This command is intended for maintainers to use"
@@ -605,6 +662,8 @@ dvi-am:
 
 html: html-recursive
 
+html-am:
+
 info: info-recursive
 
 info-am:
@@ -613,18 +672,28 @@ install-data-am:
 
 install-dvi: install-dvi-recursive
 
+install-dvi-am:
+
 install-exec-am:
 
 install-html: install-html-recursive
 
+install-html-am:
+
 install-info: install-info-recursive
 
+install-info-am:
+
 install-man:
 
 install-pdf: install-pdf-recursive
 
+install-pdf-am:
+
 install-ps: install-ps-recursive
 
+install-ps-am:
+
 installcheck-am: installcheck-local
 
 maintainer-clean: maintainer-clean-recursive
@@ -646,8 +715,8 @@ ps-am:
 
 uninstall-am:
 
-.MAKE: $(RECURSIVE_CLEAN_TARGETS) $(RECURSIVE_TARGETS) install-am \
-	install-strip
+.MAKE: $(RECURSIVE_CLEAN_TARGETS) $(RECURSIVE_TARGETS) check-am \
+	ctags-recursive install-am install-strip tags-recursive
 
 .PHONY: $(RECURSIVE_CLEAN_TARGETS) $(RECURSIVE_TARGETS) CTAGS GTAGS \
 	all all-am all-local check check-TESTS check-am clean \
@@ -886,6 +955,7 @@ check-vfd: $(LIB) $(PROGS) $(TESTS)
 	        HDF5_DRIVER=$$vfd $(MAKE) $(AM_MAKEFLAGS) check || exit 1;    \
 	    fi;                                                               \
 	done
+
 # Tell versions [3.59,3.63) of GNU make to not export all variables.
 # Otherwise a system limit (for SysV at least) may be exceeded.
 .NOEXPORT: