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authorScot Breitenfeld <brtnfld@hdfgroup.org>2012-12-10 22:30:38 (GMT)
committerScot Breitenfeld <brtnfld@hdfgroup.org>2012-12-10 22:30:38 (GMT)
commit17fd0e9ce4e56ad786ccf04907fcddabddab936a (patch)
treed0e3e388788b47fa862878e48077dbf32cfe69c8 /fortran/examples/h5_extend.f90
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[svn-r23088] Changed Fortran examples to reflect changes in documentation via Barbara;
mainly program name changes. Two new examples added: h5_extend.f90 h5_subset.f90 and example fileexample.f90 was removed. Tested: jam (gnu compilers)
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+! * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
+! Copyright by The HDF Group. *
+! Copyright by the Board of Trustees of the University of Illinois. *
+! All rights reserved. *
+! *
+! This file is part of HDF5. The full HDF5 copyright notice, including *
+! terms governing use, modification, and redistribution, is contained in *
+! the files COPYING and Copyright.html. COPYING can be found at the root *
+! of the source code distribution tree; Copyright.html can be found at the *
+! root level of an installed copy of the electronic HDF5 document set and *
+! is linked from the top-level documents page. It can also be found at *
+! http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have *
+! access to either file, you may request a copy from help@hdfgroup.org. *
+! * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
+!
+! This example extends an HDF5 dataset. It is used in the HDF5 Tutorial.
+
+PROGRAM H5_EXTEND
+
+ USE HDF5 ! This module contains all necessary modules
+
+ IMPLICIT NONE
+
+ !
+ !the dataset is stored in file "extend.h5"
+ !
+ CHARACTER(LEN=9), PARAMETER :: filename = "extend.h5"
+
+ !
+ !dataset rank is 2 and name is "ExtendibleArray"
+ !
+ CHARACTER(LEN=15), PARAMETER :: dsetname = "ExtendibleArray"
+ INTEGER :: RANK = 2
+
+ INTEGER(HID_T) :: file_id ! File identifier
+ INTEGER(HID_T) :: dset_id ! Dataset identifier
+ INTEGER(HID_T) :: dataspace ! Dataspace identifier
+ INTEGER(HID_T) :: memspace ! Memory dataspace identifier
+ INTEGER(HID_T) :: crp_list ! Dataset creation property identifier
+
+ !
+ !dataset dimensions at creation time
+ !
+ INTEGER(HSIZE_T), DIMENSION(1:2) :: dims = (/3,3/)
+
+ !
+ !data dimensions
+ !
+ INTEGER(HSIZE_T), DIMENSION(1:2) :: dimsc = (/2,5/)
+ INTEGER(HSIZE_T), DIMENSION(1:2) :: dimsm = (/3,7/)
+
+ !
+ !Maximum dimensions
+ !
+ INTEGER(HSIZE_T), DIMENSION(1:2) :: maxdims
+
+ INTEGER(HSIZE_T), DIMENSION(1:2) :: offset
+ INTEGER(HSIZE_T), DIMENSION(1:2) :: count
+
+ !
+ ! Variables for reading and writing
+ !
+ INTEGER, DIMENSION(1:3,1:3) :: data1
+ INTEGER, DIMENSION(1:21) :: data2 = &
+ (/2, 3, 4, 2, 3, 4, 2, 3, 4, 2, 3, 4, 2, 3, 4, 2, 3, 4, 2, 3, 4/)
+ INTEGER(HSIZE_T), DIMENSION(1:2) :: data_dims
+
+ !
+ !Size of data in the file
+ !
+ INTEGER(HSIZE_T), DIMENSION(1:2) :: size
+
+ !
+ !general purpose integer
+ !
+ INTEGER :: i, j
+
+ !
+ !flag to check operation success
+ !
+ INTEGER :: error
+
+ !
+ !Variables used in reading data back
+ !
+ INTEGER(HSIZE_T), DIMENSION(1:2) :: dimsr, maxdimsr
+ INTEGER :: rankr
+ INTEGER, DIMENSION(1:3,1:10) :: rdata
+
+ !
+ !Initialize FORTRAN predifined datatypes
+ !
+ CALL h5open_f(error)
+
+ !
+ !Create a new file using default properties.
+ !
+ CALL h5fcreate_f(filename, H5F_ACC_TRUNC_F, file_id, error)
+
+ !
+ !Create the data space with unlimited dimensions.
+ !
+ maxdims = (/H5S_UNLIMITED_F, H5S_UNLIMITED_F/)
+
+ CALL h5screate_simple_f(RANK, dims, dataspace, error, maxdims)
+
+ !
+ !Modify dataset creation properties, i.e. enable chunking
+ !
+ CALL h5pcreate_f(H5P_DATASET_CREATE_F, crp_list, error)
+
+ CALL h5pset_chunk_f(crp_list, RANK, dimsc, error)
+
+ !
+ !Create a dataset with 3X3 dimensions using cparms creation propertie .
+ !
+ CALL h5dcreate_f(file_id, dsetname, H5T_NATIVE_INTEGER, dataspace, &
+ dset_id, error, crp_list )
+ CALL h5sclose_f(dataspace, error)
+
+ !
+ !Fill data array with 1's
+ !
+ DO i = 1, dims(1)
+ DO j = 1, dims(2)
+ data1(i,j) = 1
+ END DO
+ END DO
+
+ !
+ !Write data array to dataset
+ !
+ data_dims(1:2) = (/3,3/)
+ CALL h5dwrite_f(dset_id, H5T_NATIVE_INTEGER, data1, data_dims, error)
+
+ !
+ !Extend the dataset. Dataset becomes 10 x 3.
+ !
+ size(1:2) = (/3,10/)
+ CALL h5dextend_f(dset_id, size, error)
+
+ offset(1:2) = (/0,3/)
+ count(1:2) = (/3,7/)
+
+ CALL h5screate_simple_f (2, dimsm, memspace, error)
+
+ !
+ !Write to 3x7 extended part of dataset
+ !
+ CALL h5dget_space_f(dset_id, dataspace, error)
+ CALL h5sselect_hyperslab_f(dataspace, H5S_SELECT_SET_F, &
+ offset, count, error)
+
+ data_dims(1:2) = (/3,7/)
+ CALL H5dwrite_f(dset_id, H5T_NATIVE_INTEGER, data2, data_dims, error, &
+ memspace, dataspace)
+
+ !
+ !Close the objects that were opened.
+ !
+ CALL h5sclose_f(dataspace, error)
+ CALL h5pclose_f(crp_list, error)
+ CALL h5dclose_f(dset_id, error)
+ CALL h5fclose_f(file_id, error)
+
+ !
+ !read the data back
+ !
+ !Open the file.
+ !
+ CALL h5fopen_f (filename, H5F_ACC_RDONLY_F, file_id, error)
+
+ !
+ !Open the dataset.
+ !
+ CALL h5dopen_f(file_id, dsetname, dset_id, error)
+
+ !
+ !Get dataset's dataspace handle.
+ !
+ CALL h5dget_space_f(dset_id, dataspace, error)
+
+ !
+ !Get dataspace's rank.
+ !
+ CALL h5sget_simple_extent_ndims_f(dataspace, rankr, error)
+
+ !
+ !Get dataspace's dimensions.
+ !
+ CALL h5sget_simple_extent_dims_f(dataspace, dimsr, maxdimsr, error)
+
+ !
+ !Get creation property list.
+ !
+ CALL h5dget_create_plist_f(dset_id, crp_list, error)
+
+ !
+ ! Fill read buffer with zeroes
+ !
+ rdata(1:dimsr(1),1:dimsr(2)) = 0
+
+ !
+ !create memory dataspace
+ !
+ CALL h5screate_simple_f(rankr, dimsr, memspace, error)
+
+ !
+ !Read data
+ !
+ data_dims(1:2) = (/3,10/)
+ CALL H5dread_f(dset_id, H5T_NATIVE_INTEGER, rdata, data_dims, &
+ error, memspace, dataspace)
+
+ PRINT *,"Dataset:"
+ DO i = 1, dimsr(1)
+ PRINT *, rdata(i,1:dimsr(2))
+ END DO
+
+ !
+ !Close the objects that were opened.
+ !
+ CALL h5sclose_f(dataspace, error)
+ CALL h5sclose_f(memspace, error)
+ CALL h5pclose_f(crp_list, error)
+ CALL h5dclose_f(dset_id, error)
+ CALL h5fclose_f(file_id, error)
+
+ !Close FORTRAN predefined datatypes
+ !
+ CALL h5close_f(error)
+
+END PROGRAM H5_EXTEND