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authorScot Breitenfeld <brtnfld@hdfgroup.org>2015-08-11 01:00:33 (GMT)
committerScot Breitenfeld <brtnfld@hdfgroup.org>2015-08-11 01:00:33 (GMT)
commit415eb5512b0726716b5f8f72de3dda11ecff8091 (patch)
treeec3eddd4abad940acc89f83c0f114203ff3d6345 /fortran/src/H5Dff.F90
parent1900d6a65db0bebcadbcbf98f8a8a9e1d9ff47b4 (diff)
parenta9bef45c7528f2fcca5817900b5536d9d6c14889 (diff)
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[svn-r27488] Merged the F2003_v1.10 branch to the trunk.
Tested: h5committest
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+!****h* ROBODoc/H5D
+!
+! NAME
+! MODULE H5D
+!
+! FILE
+! fortran/src/H5Dff.f90
+!
+! PURPOSE
+! This file contains Fortran interfaces for H5D functions.
+!
+! COPYRIGHT
+! * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
+! Copyright by The HDF Group. *
+! Copyright by the Board of Trustees of the University of Illinois. *
+! All rights reserved. *
+! *
+! This file is part of HDF5. The full HDF5 copyright notice, including *
+! terms governing use, modification, and redistribution, is contained in *
+! the files COPYING and Copyright.html. COPYING can be found at the root *
+! of the source code distribution tree; Copyright.html can be found at the *
+! root level of an installed copy of the electronic HDF5 document set and *
+! is linked from the top-level documents page. It can also be found at *
+! http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have *
+! access to either file, you may request a copy from help@hdfgroup.org. *
+! * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
+!
+! NOTES
+! (1) The maximum rank of an array allowed in Fortran is 7, therefore
+! we only provide an interface for arrays up to and including rank 7.
+!
+! (2) Unfortunately we are using a generic interface and one of the factors
+! used in determining the proper routine to select is that of the array
+! rank being passed. Therefore, we can not create just one subroutine for
+! each array type (integer, real, etc...) and use a
+! rank 1 array of assumed size to handle multiple ranks, i.e.
+! (i.e. integer, dimension(*) :: ... )
+! (i.e. real , dimension(*) :: ... ) etc...
+!
+! (3) Could not place the USE, INTRINSIC :: ISO_C_BINDING in the module header because it may
+! conflict with the USE, INTRINSIC :: ISO_C_BINDING included in the user's program. Moved
+! the statement instead to each subroutine.
+!
+!
+! (4) C_LOC and character strings according to the Fortran 2003 standard:
+!
+! 15.1.2.5 C_LOC(X)
+!
+! Argument. X shall either
+!
+! (A) have interoperable type and type parameters and be
+! (a) a variable that has the TARGET attribute and is interoperable,
+! (b) an allocated allocatable variable that has the TARGET attribute
+! and is not an array of zero size, or
+! (c) an associated scalar pointer, or
+! (B) be a nonpolymorphic scalar, have no length type parameters, and be
+! (a) a nonallocatable, nonpointer variable that has the TARGET attribute,
+! (b) an allocated allocatable variable that has the TARGET attribute, or
+! (c) an associated pointer.
+!
+! - When X is a character, for interoperability the standard is:
+!
+! 15.2.1 Interoperability of intrinsic types
+!
+! ...if the type is character, interoperability also requires that the length type parameter
+! be omitted or be specified by an initialization expression whose value is one.
+!
+! THEREFORE compilers that have not extended the standard require the
+! argument in C_LOC to be of the variant:
+!
+! CHARACTER(LEN=1), TARGET :: chr
+! or
+! CHARACTER, TARGET :: chr
+!
+! _____ __ __ _____ ____ _____ _______ _ _ _______
+! |_ _| \/ | __ \ / __ \| __ \__ __|/\ | \ | |__ __|
+! **** | | | \ / | |__) | | | | |__) | | | / \ | \| | | | ****
+! **** | | | |\/| | ___/| | | | _ / | | / /\ \ | . ` | | | ****
+! **** _| |_| | | | | | |__| | | \ \ | |/ ____ \| |\ | | | ****
+! |_____|_| |_|_| \____/|_| \_\ |_/_/ \_\_| \_| |_|
+!
+! If you add a new H5D function you must add the function name to the
+! Windows dll file 'hdf5_fortrandll.def.in' in the fortran/src directory.
+! This is needed for Windows based operating systems.
+!
+!*****
+
+#include <H5config_f.inc>
+
+MODULE H5D
+
+ USE, INTRINSIC :: ISO_C_BINDING
+ USE H5GLOBAL
+
+ INTERFACE h5dextend_f
+ MODULE PROCEDURE h5dset_extent_f
+ END INTERFACE
+
+ INTERFACE h5dread_vl_f
+ MODULE PROCEDURE h5dread_vl_integer
+ MODULE PROCEDURE h5dread_vl_real
+ MODULE PROCEDURE h5dread_vl_string
+ END INTERFACE
+
+ INTERFACE h5dwrite_vl_f
+ MODULE PROCEDURE h5dwrite_vl_integer
+ MODULE PROCEDURE h5dwrite_vl_real
+ MODULE PROCEDURE h5dwrite_vl_string
+ END INTERFACE
+
+ INTERFACE h5dwrite_f
+ MODULE PROCEDURE h5dwrite_reference_obj
+ MODULE PROCEDURE h5dwrite_reference_dsetreg
+ MODULE PROCEDURE h5dwrite_char_scalar
+ ! This is the preferred way to call h5dwrite
+ ! by passing an address
+ MODULE PROCEDURE h5dwrite_ptr
+ END INTERFACE
+
+ INTERFACE h5dread_f
+ MODULE PROCEDURE h5dread_reference_obj
+ MODULE PROCEDURE h5dread_reference_dsetreg
+ MODULE PROCEDURE h5dread_char_scalar
+ ! This is the preferred way to call h5dread
+ ! by passing an address
+ MODULE PROCEDURE h5dread_ptr
+
+ END INTERFACE
+
+
+! Interface for the function used to pass the C pointer of the buffer
+! to the C H5Dwrite routine
+
+ INTERFACE
+ INTEGER FUNCTION h5dwrite_f_c(dset_id, mem_type_id, &
+ mem_space_id_default , &
+ file_space_id_default, &
+ xfer_prp_default, buf ) BIND(C, NAME='h5dwrite_f_c')
+ IMPORT :: c_ptr
+ IMPORT :: HID_T
+ IMPLICIT NONE
+ INTEGER(HID_T), INTENT(IN) :: dset_id
+ INTEGER(HID_T), INTENT(IN) :: mem_type_id
+ INTEGER(HID_T) :: mem_space_id_default
+ INTEGER(HID_T) :: file_space_id_default
+ INTEGER(HID_T) :: xfer_prp_default
+ TYPE(C_PTR), VALUE :: buf
+ END FUNCTION h5dwrite_f_c
+ END INTERFACE
+
+! Interface for the function used to pass the C pointer of the buffer
+! to the C H5Dread routine
+
+ INTERFACE
+ INTEGER FUNCTION h5dread_f_c(dset_id, mem_type_id, &
+ mem_space_id_default, &
+ file_space_id_default, &
+ xfer_prp_default, buf) BIND(C, NAME='h5dread_f_c')
+ IMPORT :: c_ptr
+ IMPORT :: HID_T
+ IMPLICIT NONE
+ INTEGER(HID_T), INTENT(IN) :: dset_id
+ INTEGER(HID_T), INTENT(IN) :: mem_type_id
+ INTEGER(HID_T) :: mem_space_id_default
+ INTEGER(HID_T) :: file_space_id_default
+ INTEGER(HID_T) :: xfer_prp_default
+ TYPE(C_PTR), VALUE :: buf
+ END FUNCTION h5dread_f_c
+ END INTERFACE
+
+ INTERFACE h5dfill_f
+ MODULE PROCEDURE h5dfill_integer
+ MODULE PROCEDURE h5dfill_c_float
+ MODULE PROCEDURE h5dfill_c_double
+#ifdef H5_FORTRAN_HAVE_C_LONG_DOUBLE
+ MODULE PROCEDURE h5dfill_c_long_double
+#endif
+ MODULE PROCEDURE h5dfill_char
+ END INTERFACE
+
+! Interface for the function used to pass the C pointer of the buffer
+! to the C H5Dfill routine
+
+ INTERFACE
+ INTEGER FUNCTION h5dfill_c(f_ptr_fill_value, fill_type_id, space_id, &
+ f_ptr_buf, mem_type_id) BIND(C, NAME='h5dfill_c')
+ IMPORT :: c_ptr
+ IMPORT :: HID_T
+ IMPLICIT NONE
+ TYPE(C_PTR), VALUE :: f_ptr_fill_value
+ INTEGER(HID_T) :: fill_type_id ! Fill value datatype identifier
+ INTEGER(HID_T), INTENT(IN) :: space_id ! Memory dataspace selection identifier
+ TYPE(C_PTR), VALUE :: f_ptr_buf
+ INTEGER(HID_T) :: mem_type_id
+ END FUNCTION h5dfill_c
+ END INTERFACE
+
+CONTAINS
+
+!
+!****s* H5D/h5dcreate_f
+!
+! NAME
+! h5dcreate_f
+!
+! PURPOSE
+! Creates a dataset at the specified location
+!
+! INPUTS
+! loc_id - file or group identifier
+! name - dataset name
+! type_id - dataset datatype identifier
+! space_id - dataset dataspace identifier
+! OUTPUTS
+! dset_id - dataset identifier
+! hdferr - Returns 0 if successful and -1 if fails
+! OPTIONAL PARAMETERS
+! creation_prp - Dataset creation property list
+! lcpl_id - Link creation property list
+! dapl_id - Dataset access property list
+!
+! AUTHOR
+! Elena Pourmal
+! August 12, 1999
+!
+! HISTORY
+!
+! - Explicit Fortran interfaces were added for
+! called C functions (it is needed for Windows
+! port). February 28, 2001
+!
+! - Added version's 1.8 new optional parameters
+! February, 2008
+!
+! SOURCE
+ SUBROUTINE h5dcreate_f(loc_id, name, type_id, space_id, dset_id, &
+ hdferr, dcpl_id, lcpl_id, dapl_id)
+ IMPLICIT NONE
+ INTEGER(HID_T), INTENT(IN) :: loc_id ! File or group identifier
+ CHARACTER(LEN=*), INTENT(IN) :: name ! Name of the dataset
+ INTEGER(HID_T), INTENT(IN) :: type_id ! Datatype identifier
+ INTEGER(HID_T), INTENT(IN) :: space_id ! Dataspace identifier
+ INTEGER(HID_T), INTENT(OUT) :: dset_id ! Dataset identifier
+ INTEGER, INTENT(OUT) :: hdferr ! Error code
+!*****
+ INTEGER(HID_T), OPTIONAL, INTENT(IN) :: dcpl_id ! Dataset creation property list
+ INTEGER(HID_T), OPTIONAL, INTENT(IN) :: lcpl_id ! Link creation property list
+ INTEGER(HID_T), OPTIONAL, INTENT(IN) :: dapl_id ! Dataset access property list
+
+ INTEGER(HID_T) :: lcpl_id_default
+ INTEGER(HID_T) :: dcpl_id_default
+ INTEGER(HID_T) :: dapl_id_default
+
+ INTEGER :: namelen ! Name length
+
+ INTERFACE
+ INTEGER FUNCTION h5dcreate_c(loc_id, name, namelen, type_id, &
+ space_id, lcpl_id_default, dcpl_id_default, dapl_id_default, dset_id) &
+ BIND(C,NAME='h5dcreate_c')
+ IMPORT :: C_CHAR
+ IMPORT :: HID_T
+ IMPLICIT NONE
+ INTEGER(HID_T), INTENT(IN) :: loc_id
+ CHARACTER(KIND=C_CHAR), DIMENSION(*), INTENT(IN) :: name
+ INTEGER :: namelen
+ INTEGER(HID_T), INTENT(IN) :: type_id
+ INTEGER(HID_T), INTENT(IN) :: space_id
+
+ INTEGER(HID_T) :: lcpl_id_default
+ INTEGER(HID_T) :: dcpl_id_default
+ INTEGER(HID_T) :: dapl_id_default
+
+ INTEGER(HID_T), INTENT(OUT) :: dset_id
+ END FUNCTION h5dcreate_c
+ END INTERFACE
+
+ lcpl_id_default = H5P_DEFAULT_F
+ dcpl_id_default = H5P_DEFAULT_F
+ dapl_id_default = H5P_DEFAULT_F
+
+ IF(PRESENT(lcpl_id)) lcpl_id_default = lcpl_id
+ IF(PRESENT(dcpl_id)) dcpl_id_default = dcpl_id
+ IF(PRESENT(dapl_id)) dapl_id_default = dapl_id
+
+ namelen = LEN(name)
+ hdferr = h5dcreate_c(loc_id, name, namelen, type_id, space_id, &
+ lcpl_id_default, dcpl_id_default, dapl_id_default, dset_id)
+
+ END SUBROUTINE h5dcreate_f
+
+!
+!****s* H5D/h5dopen_f
+!
+! NAME
+! h5dopen_f
+!
+! PURPOSE
+! Opens an existing dataset.
+!
+! INPUTS
+! loc_id - file or group identifier
+! name - dataset name
+! OUTPUTS
+! dset_id - dataset identifier
+! hdferr - Returns 0 if successful and -1 if fails
+! OPTIONAL PARAMETERS
+! dapl_id - Dataset access property list
+!
+! AUTHOR
+! Elena Pourmal
+! August 12, 1999
+!
+! HISTORY
+! -Explicit Fortran interfaces were added for
+! called C functions (it is needed for Windows
+! port). February 28, 2001
+!
+! -Added 1.8 (optional) parameter dapl_id
+! February, 2008, M. Scot Breitenfeld
+!
+! SOURCE
+ SUBROUTINE h5dopen_f(loc_id, name, dset_id, hdferr, dapl_id)
+ IMPLICIT NONE
+ INTEGER(HID_T), INTENT(IN) :: loc_id ! File or group identifier
+ CHARACTER(LEN=*), INTENT(IN) :: name ! Name of the dataset
+ INTEGER(HID_T), INTENT(OUT) :: dset_id ! Dataset identifier
+ INTEGER, INTENT(OUT) :: hdferr ! Error code
+ INTEGER(HID_T), OPTIONAL, INTENT(IN) :: dapl_id ! Dataset access property list
+!*****
+ INTEGER :: namelen ! Name length
+
+ INTEGER(HID_T) :: dapl_id_default
+
+ INTERFACE
+ INTEGER FUNCTION h5dopen_c(loc_id, name, namelen, dapl_id_default, dset_id) &
+ BIND(C,NAME='h5dopen_c')
+ IMPORT :: C_CHAR
+ IMPORT :: HID_T
+ IMPLICIT NONE
+ INTEGER(HID_T), INTENT(IN) :: loc_id
+ CHARACTER(KIND=C_CHAR), DIMENSION(*), INTENT(IN) :: name
+ INTEGER :: namelen
+ INTEGER(HID_T), INTENT(IN) :: dapl_id_default
+ INTEGER(HID_T), INTENT(OUT) :: dset_id
+ END FUNCTION h5dopen_c
+ END INTERFACE
+
+ dapl_id_default = H5P_DEFAULT_F
+ IF(PRESENT(dapl_id)) dapl_id_default = dapl_id
+
+ namelen = LEN(name)
+ hdferr = h5dopen_c(loc_id, name, namelen, dapl_id_default, dset_id)
+
+ END SUBROUTINE h5dopen_f
+
+!
+!****s* H5D/h5dclose_f
+!
+! NAME
+! h5dclose_f
+!
+! PURPOSE
+! Closes a dataset.
+!
+! INPUTS
+! dset_id - dataset identifier
+! OUTPUTS
+! hdferr - Returns 0 if successful and -1 if fails
+!
+! AUTHOR
+! Elena Pourmal
+! August 12, 1999
+!
+! HISTORY
+! Explicit Fortran interfaces were added for
+! called C functions (it is needed for Windows
+! port). February 28, 2001
+!
+! SOURCE
+ SUBROUTINE h5dclose_f(dset_id, hdferr)
+ IMPLICIT NONE
+ INTEGER(HID_T), INTENT(IN) :: dset_id ! Dataset identifier
+ INTEGER, INTENT(OUT) :: hdferr ! Error code
+!*****
+ INTERFACE
+ INTEGER FUNCTION h5dclose_c(dset_id) &
+ BIND(C,NAME='h5dclose_c')
+ IMPORT :: HID_T
+ IMPLICIT NONE
+ INTEGER(HID_T), INTENT(IN) :: dset_id
+ END FUNCTION h5dclose_c
+ END INTERFACE
+
+ hdferr = h5dclose_c(dset_id)
+
+ END SUBROUTINE h5dclose_f
+
+!
+!****s* H5D/h5dget_type_f
+!
+! NAME
+! h5dget_type_f
+!
+! PURPOSE
+! Returns an identifier for a copy of the datatype for a
+! dataset.
+!
+! INPUTS
+! dataset_id - dataset identifier
+! OUTPUTS
+! datatype_id - dataspace identifier
+! hdferr - Returns 0 if successful and -1 if fails
+!
+! AUTHOR
+! Elena Pourmal
+! August 12, 1999
+!
+! HISTORY
+! Explicit Fortran interfaces were added for
+! called C functions (it is needed for Windows
+! port). February 28, 2001
+!
+! NOTES
+!
+! SOURCE
+ SUBROUTINE h5dget_type_f(dataset_id, datatype_id, hdferr)
+ IMPLICIT NONE
+ INTEGER(HID_T), INTENT(IN) :: dataset_id ! Dataset identifier
+ INTEGER(HID_T), INTENT(OUT) :: datatype_id ! Datatype identifier
+ INTEGER, INTENT(OUT) :: hdferr ! Error code
+!*****
+ INTERFACE
+ INTEGER FUNCTION h5dget_type_c(dataset_id, datatype_id) &
+ BIND(C,NAME='h5dget_type_c')
+ IMPORT :: HID_T
+ IMPLICIT NONE
+ INTEGER(HID_T), INTENT(IN) :: dataset_id
+ INTEGER(HID_T), INTENT(OUT) :: datatype_id
+ END FUNCTION h5dget_type_c
+ END INTERFACE
+
+ hdferr = h5dget_type_c (dataset_id, datatype_id)
+ END SUBROUTINE h5dget_type_f
+
+!
+!****s* H5D/h5dset_extent
+!
+! NAME
+! h5dset_extent (instead of obsolete name: h5dextend_f)
+!
+! PURPOSE
+! Extends a dataset with unlimited dimension.
+!
+! INPUTS
+! dataset_id - dataset identifier
+! size - array containing the new magnitude of
+! each dimension
+! OUTPUTS
+! hdferr - Returns 0 if successful and -1 if fails
+!
+! AUTHOR
+! Elena Pourmal
+! August 12, 1999
+!
+! HISTORY
+! Explicit Fortran interfaces were added for
+! called C functions (it is needed for Windows
+! port). February 28, 2001
+!
+! Changed name from the now obsolete h5dextend_f
+! to h5dset_extent_f. Provided interface to old name
+! for backward compatability. -MSB- March 14, 2008
+!
+! SOURCE
+ SUBROUTINE h5dset_extent_f(dataset_id, size, hdferr)
+ IMPLICIT NONE
+ INTEGER(HID_T), INTENT(IN) :: dataset_id ! Dataset identifier
+ INTEGER(HSIZE_T), DIMENSION(*), INTENT(IN) :: size
+ ! Array containing
+ ! dimensions' sizes
+ INTEGER, INTENT(OUT) :: hdferr ! Error code
+!*****
+ INTERFACE
+ INTEGER FUNCTION h5dset_extent_c(dataset_id, size) &
+ BIND(C,NAME='h5dset_extent_c')
+ IMPORT :: HID_T, HSIZE_T
+ IMPLICIT NONE
+ INTEGER(HID_T), INTENT(IN) :: dataset_id
+ INTEGER(HSIZE_T), DIMENSION(*), INTENT(IN) :: size
+ END FUNCTION h5dset_extent_c
+ END INTERFACE
+
+ hdferr = H5Dset_extent_c(dataset_id, size)
+ END SUBROUTINE h5dset_extent_f
+
+!****s* H5D/h5dget_create_plist_f
+!
+! NAME
+! h5dget_create_plist_f
+!
+! PURPOSE
+! Returns an identifier for a copy of the dataset creation
+! property list for a dataset.
+!
+! INPUTS
+! dataset_id - dataset identifier
+! OUTPUTS
+! plist_id - creation property list identifier
+! hdferr - Returns 0 if successful and -1 if fails
+!
+! AUTHOR
+! Elena Pourmal
+! August 12, 1999
+!
+! HISTORY
+! Explicit Fortran interfaces were added for
+! called C functions (it is needed for Windows
+! port). February 28, 2001
+! SOURCE
+ SUBROUTINE h5dget_create_plist_f(dataset_id, plist_id, hdferr)
+ IMPLICIT NONE
+ INTEGER(HID_T), INTENT(IN) :: dataset_id ! Dataset identifier
+ INTEGER(HID_T), INTENT(OUT) :: plist_id ! Dataset creation
+ ! property list identifier
+ INTEGER, INTENT(OUT) :: hdferr ! Error code
+!*****
+ INTERFACE
+ INTEGER FUNCTION h5dget_create_plist_c(dataset_id, plist_id) &
+ BIND(C,NAME='h5dget_create_plist_c')
+ IMPORT :: HID_T
+ INTEGER(HID_T), INTENT(IN) :: dataset_id
+ INTEGER(HID_T), INTENT(OUT) :: plist_id
+ END FUNCTION h5dget_create_plist_c
+ END INTERFACE
+
+ hdferr = h5dget_create_plist_c(dataset_id, plist_id)
+ END SUBROUTINE h5dget_create_plist_f
+
+!
+!****s* H5D/h5dget_storage_size_f
+!
+! NAME
+! h5dget_storage_size_f
+!
+! PURPOSE
+! Returns the amount of storage requires by a dataset
+!
+! INPUTS
+! dataset_id - dataset identifier
+! OUTPUTS
+! size - datastorage size
+! hdferr - Returns 0 if successful and -1 if fails
+!
+! AUTHOR
+! Elena Pourmal
+! October 15, 2002
+! SOURCE
+ SUBROUTINE h5dget_storage_size_f(dataset_id, size, hdferr)
+ IMPLICIT NONE
+ INTEGER(HID_T), INTENT(IN) :: dataset_id ! Dataset identifier
+ INTEGER(HSIZE_T), INTENT(OUT) :: size ! Amount of storage
+ ! allocated for dataset
+ INTEGER, INTENT(OUT) :: hdferr ! Error code
+!*****
+ INTERFACE
+ INTEGER FUNCTION h5dget_storage_size_c(dataset_id, size) &
+ BIND(C,NAME='h5dget_storage_size_c')
+ IMPORT :: HID_T, HSIZE_T
+ INTEGER(HID_T), INTENT(IN) :: dataset_id
+ INTEGER(HSIZE_T), INTENT(OUT) :: size
+ END FUNCTION h5dget_storage_size_c
+ END INTERFACE
+
+ hdferr = h5dget_storage_size_c(dataset_id, size)
+ END SUBROUTINE h5dget_storage_size_f
+
+!
+!****s* H5D/h5dvlen_get_max_len_f
+!
+! NAME
+! h5dvlen_get_max_len_f
+!
+! PURPOSE
+! Returns maximum length of the VL array elements
+!
+! INPUTS
+! dataset_id - dataset identifier
+! type_id - datatype identifier
+! space_id - dataspace identifier
+! OUTPUTS
+! size - buffer size
+! hdferr - Returns 0 if successful and -1 if fails
+! OPTIONAL PARAMETERS
+! NONE
+!
+! AUTHOR
+! Elena Pourmal
+! October 15, 2002
+!
+! SOURCE
+ SUBROUTINE h5dvlen_get_max_len_f(dataset_id, type_id, space_id, len, hdferr)
+ IMPLICIT NONE
+ INTEGER(HID_T), INTENT(IN) :: dataset_id ! Dataset identifier
+ INTEGER(HID_T), INTENT(IN) :: type_id ! Datatype identifier
+ INTEGER(HID_T), INTENT(IN) :: space_id ! Dataspace identifier
+ INTEGER(SIZE_T), INTENT(OUT) :: len ! Maximum length of the element
+ INTEGER, INTENT(OUT) :: hdferr ! Error code
+!*****
+ INTERFACE
+ INTEGER FUNCTION h5dvlen_get_max_len_c(dataset_id, type_id, space_id, len) &
+ BIND(C,NAME='h5dvlen_get_max_len_c')
+ IMPORT :: HID_T, SIZE_T
+ INTEGER(HID_T), INTENT(IN) :: dataset_id
+ INTEGER(HID_T), INTENT(IN) :: type_id
+ INTEGER(HID_T), INTENT(IN) :: space_id
+ INTEGER(SIZE_T), INTENT(OUT) :: len
+ END FUNCTION h5dvlen_get_max_len_c
+ END INTERFACE
+
+ hdferr = h5dvlen_get_max_len_c(dataset_id, type_id, space_id, len)
+ END SUBROUTINE h5dvlen_get_max_len_f
+
+!
+!****s* H5D/h5dget_space_status_f
+!
+! NAME
+! h5dget_space_status_f
+!
+! PURPOSE
+! Returns the status of data space allocation.
+!
+! INPUTS
+! dset_id - dataset identifier
+! OUTPUTS
+! flag - status; may have one of the following values:
+! H5D_SPACE_STS_ERROR_F
+! H5D_SPACE_STS_NOT_ALLOCATED_F
+! H5D_SPACE_STS_PART_ALLOCATED_F
+! H5D_SPACE_STS_ALLOCATED_F
+! hdferr - Returns 0 if successful and -1 if fails
+!
+! AUTHOR
+! Elena Pourmal
+! March 12, 2003
+!
+! SOURCE
+ SUBROUTINE h5dget_space_status_f(dset_id, flag, hdferr)
+ IMPLICIT NONE
+ INTEGER(HID_T), INTENT(IN) :: dset_id ! Dataspace identifier
+ INTEGER, INTENT(OUT) :: flag ! Memory buffer to fill in
+ INTEGER, INTENT(OUT) :: hdferr ! Error code
+ !*****
+ INTERFACE
+ INTEGER FUNCTION h5dget_space_status_c(dset_id, flag) &
+ BIND(C,NAME='h5dget_space_status_c')
+ IMPORT :: HID_T
+ INTEGER(HID_T) :: dset_id
+ INTEGER :: flag
+ END FUNCTION h5dget_space_status_c
+ END INTERFACE
+
+ hdferr = h5dget_space_status_c(dset_id, flag)
+ END SUBROUTINE h5dget_space_status_f
+
+!
+!****s* H5D/h5dcreate_anon_f
+!
+! NAME
+! h5dcreate_anon_f
+!
+! PURPOSE
+! Creates a dataset in a file without linking it into the file structure
+!
+! INPUTS
+! loc_id - Identifier of the file or group within which to create the dataset.
+! type_id - Identifier of the datatype to use when creating the dataset.
+! space_id - Identifier of the dataspace to use when creating the dataset.
+! OUTPUTS
+! dset_id - dataset identifier
+! hdferr - Returns 0 if successful and -1 if fails
+! OPTIONAL PARAMETERS
+! dcpl_id - Dataset creation property list identifier.
+! dapl_id - Dataset access property list identifier.
+!
+! AUTHOR
+! M. Scot Breitenfeld
+! February 11, 2008
+!
+! SOURCE
+ SUBROUTINE h5dcreate_anon_f(loc_id, type_id, space_id, dset_id, hdferr, dcpl_id, dapl_id)
+ IMPLICIT NONE
+ INTEGER(HID_T), INTENT(IN) :: loc_id ! File or group identifier.
+ INTEGER(HID_T), INTENT(IN) :: type_id ! Datatype identifier.
+ INTEGER(HID_T), INTENT(IN) :: space_id ! Dataspace identifier.
+ INTEGER(HID_T), INTENT(OUT) :: dset_id ! Dataset identifier.
+ INTEGER, INTENT(OUT) :: hdferr ! Error code.
+ INTEGER(HID_T), OPTIONAL, INTENT(IN) :: dcpl_id ! Dataset creation property list identifier.
+ INTEGER(HID_T), OPTIONAL, INTENT(IN) :: dapl_id ! Dataset access property list identifier.
+!*****
+ INTEGER(HID_T) :: dcpl_id_default
+ INTEGER(HID_T) :: dapl_id_default
+
+ !
+ ! MS FORTRAN needs explicit interface for C functions called here.
+ !
+ INTERFACE
+ INTEGER FUNCTION h5dcreate_anon_c(loc_id, type_id, space_id, dcpl_id_default, dapl_id_default, dset_id) &
+ BIND(C,NAME='h5dcreate_anon_c')
+ IMPORT :: HID_T
+ IMPLICIT NONE
+ INTEGER(HID_T), INTENT(IN) :: loc_id
+ INTEGER(HID_T), INTENT(IN) :: type_id
+ INTEGER(HID_T), INTENT(IN) :: space_id
+ INTEGER(HID_T) :: dcpl_id_default
+ INTEGER(HID_T) :: dapl_id_default
+ INTEGER(HID_T), INTENT(OUT) :: dset_id
+ END FUNCTION h5dcreate_anon_c
+ END INTERFACE
+
+ dcpl_id_default = H5P_DEFAULT_F
+ dapl_id_default = H5P_DEFAULT_F
+
+ IF(PRESENT(dcpl_id)) dcpl_id_default = dcpl_id
+ IF(PRESENT(dapl_id)) dapl_id_default = dapl_id
+
+ hdferr = h5dcreate_anon_c(loc_id, type_id, space_id, dcpl_id_default, dapl_id_default, dset_id)
+
+ END SUBROUTINE h5dcreate_anon_f
+
+ SUBROUTINE h5dwrite_vl_integer(dset_id, mem_type_id, buf, dims, len, &
+ hdferr, &
+ mem_space_id, file_space_id, xfer_prp)
+ IMPLICIT NONE
+ INTEGER(HID_T), INTENT(IN) :: dset_id ! Dataset identifier
+ INTEGER(HID_T), INTENT(IN) :: mem_type_id ! Memory datatype identifier
+ INTEGER(HSIZE_T), INTENT(IN), DIMENSION(2) :: dims ! MAX len x num_elem
+ INTEGER(SIZE_T), INTENT(IN), DIMENSION(*) :: len ! Array to store
+ ! the length of each
+ ! element
+ INTEGER, INTENT(IN), DIMENSION(dims(1),dims(2)), TARGET :: buf ! Data buffer
+ INTEGER, INTENT(OUT) :: hdferr ! Error code
+ INTEGER(HID_T), OPTIONAL, INTENT(IN) :: mem_space_id ! Memory dataspace identfier
+ INTEGER(HID_T), OPTIONAL, INTENT(IN) :: file_space_id ! File dataspace identfier
+ INTEGER(HID_T), OPTIONAL, INTENT(IN) :: xfer_prp ! Transfer property list identifier
+ INTEGER(HID_T) :: xfer_prp_default
+ INTEGER(HID_T) :: mem_space_id_default
+ INTEGER(HID_T) :: file_space_id_default
+
+ INTERFACE
+ INTEGER FUNCTION h5dwrite_vl_integer_c(dset_id, mem_type_id, &
+ mem_space_id_default, &
+ file_space_id_default, &
+ xfer_prp_default, buf, dims, len) &
+ BIND(C,NAME='h5dwrite_vl_integer_c')
+ IMPORT :: HID_T, HSIZE_T, SIZE_T
+ IMPLICIT NONE
+ INTEGER(HID_T), INTENT(IN) :: dset_id
+ INTEGER(HID_T), INTENT(IN) :: mem_type_id
+ INTEGER(HID_T) :: mem_space_id_default
+ INTEGER(HID_T) :: file_space_id_default
+ INTEGER(HID_T) :: xfer_prp_default
+ INTEGER(HSIZE_T), INTENT(IN), DIMENSION(*) :: dims
+ INTEGER(SIZE_T), INTENT(IN), DIMENSION(*) :: len
+ INTEGER, INTENT(IN), DIMENSION(dims(1),dims(2)) :: buf
+ END FUNCTION h5dwrite_vl_integer_c
+ END INTERFACE
+
+ xfer_prp_default = H5P_DEFAULT_F
+ mem_space_id_default = H5S_ALL_F
+ file_space_id_default = H5S_ALL_F
+
+ IF (PRESENT(xfer_prp)) xfer_prp_default = xfer_prp
+ IF (PRESENT(mem_space_id)) mem_space_id_default = mem_space_id
+ IF (PRESENT(file_space_id)) file_space_id_default = file_space_id
+
+ hdferr = h5dwrite_vl_integer_c(dset_id, mem_type_id, mem_space_id_default, &
+ file_space_id_default, xfer_prp_default, &
+ buf, dims, len)
+
+ END SUBROUTINE h5dwrite_vl_integer
+
+ SUBROUTINE h5dread_vl_integer(dset_id, mem_type_id, buf, dims, len, &
+ hdferr, &
+ mem_space_id, file_space_id, xfer_prp)
+ IMPLICIT NONE
+ INTEGER(HID_T), INTENT(IN) :: dset_id ! Dataset identifier
+ INTEGER(HID_T), INTENT(IN) :: mem_type_id ! Memory datatype identifier
+ INTEGER(HSIZE_T), INTENT(IN), DIMENSION(2) :: dims ! MAX len x num_elem
+ INTEGER(SIZE_T), INTENT(INOUT), DIMENSION(*) :: len ! Array to store
+ ! the length of each
+ ! element
+ INTEGER, INTENT(INOUT), &
+ DIMENSION(dims(1),dims(2)), TARGET :: buf ! Data buffer
+ INTEGER, INTENT(OUT) :: hdferr ! Error code
+ ! -1 if failed, 0 otherwise
+ INTEGER(HID_T), OPTIONAL, INTENT(IN) :: mem_space_id ! Memory dataspace identfier
+ INTEGER(HID_T), OPTIONAL, INTENT(IN) :: file_space_id ! File dataspace identfier
+ INTEGER(HID_T), OPTIONAL, INTENT(IN) :: xfer_prp ! Transfer property list identifier
+ INTEGER(HID_T) :: xfer_prp_default
+ INTEGER(HID_T) :: mem_space_id_default
+ INTEGER(HID_T) :: file_space_id_default
+ INTEGER(HID_T) :: tmp
+ INTEGER :: error
+
+ INTERFACE
+ INTEGER FUNCTION h5dread_vl_integer_c(dset_id, mem_type_id, &
+ mem_space_id_default, &
+ file_space_id_default, &
+ xfer_prp_default, buf, dims, len) &
+ BIND(C,NAME='h5dread_vl_integer_c')
+ IMPORT :: HID_T, HSIZE_T, SIZE_T
+ IMPLICIT NONE
+ INTEGER(HID_T), INTENT(IN) :: dset_id
+ INTEGER(HID_T), INTENT(IN) :: mem_type_id
+ INTEGER(HID_T) :: mem_space_id_default
+ INTEGER(HID_T) :: file_space_id_default
+ INTEGER(HID_T) :: xfer_prp_default
+ INTEGER(HSIZE_T), INTENT(IN), DIMENSION(*) :: dims
+ INTEGER(SIZE_T), INTENT(INOUT), DIMENSION(*) :: len
+ INTEGER, INTENT(INOUT), DIMENSION(dims(1),dims(2)) :: buf
+ END FUNCTION h5dread_vl_integer_c
+ END INTERFACE
+
+ CALL h5dget_space_f(dset_id, tmp, error)
+ xfer_prp_default = H5P_DEFAULT_F
+ mem_space_id_default = tmp
+ file_space_id_default = tmp
+
+ IF (PRESENT(xfer_prp)) xfer_prp_default = xfer_prp
+ IF (PRESENT(mem_space_id)) mem_space_id_default = mem_space_id
+ IF (PRESENT(file_space_id)) file_space_id_default = file_space_id
+
+ hdferr = h5dread_vl_integer_c(dset_id, mem_type_id, mem_space_id_default, &
+ file_space_id_default, xfer_prp_default, &
+ buf, dims, len)
+
+ END SUBROUTINE h5dread_vl_integer
+
+ SUBROUTINE h5dwrite_vl_real(dset_id, mem_type_id, buf, dims, len, &
+ hdferr, &
+ mem_space_id, file_space_id, xfer_prp)
+ IMPLICIT NONE
+ INTEGER(HID_T), INTENT(IN) :: dset_id ! Dataset identifier
+ INTEGER(HID_T), INTENT(IN) :: mem_type_id ! Memory datatype identifier
+ INTEGER(HSIZE_T), INTENT(IN), DIMENSION(2) :: dims ! MAX len x num_elem
+ INTEGER(SIZE_T), INTENT(IN), DIMENSION(*) :: len ! Array to store
+ ! the length of each
+ ! element
+ REAL, INTENT(IN), &
+ DIMENSION(dims(1),dims(2)) :: buf ! Data buffer
+ INTEGER, INTENT(OUT) :: hdferr ! Error code
+ INTEGER(HID_T), OPTIONAL, INTENT(IN) :: mem_space_id ! Memory dataspace identfier
+ INTEGER(HID_T), OPTIONAL, INTENT(IN) :: file_space_id ! File dataspace identfier
+ INTEGER(HID_T), OPTIONAL, INTENT(IN) :: xfer_prp ! Transfer property list identifier
+
+ INTEGER(HID_T) :: xfer_prp_default
+ INTEGER(HID_T) :: mem_space_id_default
+ INTEGER(HID_T) :: file_space_id_default
+
+ INTERFACE
+ INTEGER FUNCTION h5dwrite_vl_real_c(dset_id, mem_type_id, &
+ mem_space_id_default, &
+ file_space_id_default, &
+ xfer_prp_default, buf, dims, len) &
+ BIND(C,NAME='h5dwrite_vl_real_c')
+ IMPORT :: HID_T, HSIZE_T, SIZE_T
+ IMPLICIT NONE
+ INTEGER(HID_T), INTENT(IN) :: dset_id
+ INTEGER(HID_T), INTENT(IN) :: mem_type_id
+ INTEGER(HID_T) :: mem_space_id_default
+ INTEGER(HID_T) :: file_space_id_default
+ INTEGER(HID_T) :: xfer_prp_default
+ INTEGER(HSIZE_T), INTENT(IN), DIMENSION(*) :: dims
+ INTEGER(SIZE_T), INTENT(IN), DIMENSION(*) :: len
+ REAL, INTENT(IN), &
+ DIMENSION(dims(1),dims(2)) :: buf
+ END FUNCTION h5dwrite_vl_real_c
+ END INTERFACE
+
+
+ xfer_prp_default = H5P_DEFAULT_F
+ mem_space_id_default = H5S_ALL_F
+ file_space_id_default = H5S_ALL_F
+
+ IF (PRESENT(xfer_prp)) xfer_prp_default = xfer_prp
+ IF (PRESENT(mem_space_id)) mem_space_id_default = mem_space_id
+ IF (PRESENT(file_space_id)) file_space_id_default = file_space_id
+
+ hdferr = h5dwrite_vl_real_c(dset_id, mem_type_id, mem_space_id_default, &
+ file_space_id_default, xfer_prp_default, &
+ buf, dims, len)
+
+ END SUBROUTINE h5dwrite_vl_real
+
+ SUBROUTINE h5dread_vl_real(dset_id, mem_type_id, buf, dims, len, &
+ hdferr, &
+ mem_space_id, file_space_id, xfer_prp)
+ IMPLICIT NONE
+ INTEGER(HID_T), INTENT(IN) :: dset_id ! Dataset identifier
+ INTEGER(HID_T), INTENT(IN) :: mem_type_id ! Memory datatype identifier
+ INTEGER(HSIZE_T), INTENT(IN), DIMENSION(2) :: dims ! MAX len x num_elem
+ INTEGER(SIZE_T), INTENT(INOUT), DIMENSION(*) :: len ! Array to store the length of each element
+ REAL, INTENT(INOUT), &
+ DIMENSION(dims(1),dims(2)) :: buf ! Data buffer
+ INTEGER, INTENT(OUT) :: hdferr ! Error code
+ ! -1 if failed, 0 otherwise
+ INTEGER(HID_T), OPTIONAL, INTENT(IN) :: mem_space_id ! Memory dataspace identfier
+ INTEGER(HID_T), OPTIONAL, INTENT(IN) :: file_space_id ! File dataspace identfier
+ INTEGER(HID_T), OPTIONAL, INTENT(IN) :: xfer_prp ! Transfer property list identifier
+
+ INTEGER(HID_T) :: xfer_prp_default
+ INTEGER(HID_T) :: mem_space_id_default
+ INTEGER(HID_T) :: file_space_id_default
+ INTEGER(HID_T) :: tmp
+ INTEGER :: error
+
+ INTERFACE
+ INTEGER FUNCTION h5dread_vl_real_c(dset_id, mem_type_id, &
+ mem_space_id_default, &
+ file_space_id_default, &
+ xfer_prp_default, buf, dims, len) &
+ BIND(C,NAME='h5dread_vl_real_c')
+ IMPORT :: HID_T, HSIZE_T, SIZE_T
+ IMPLICIT NONE
+ INTEGER(HID_T), INTENT(IN) :: dset_id
+ INTEGER(HID_T), INTENT(IN) :: mem_type_id
+ INTEGER(HID_T) :: mem_space_id_default
+ INTEGER(HID_T) :: file_space_id_default
+ INTEGER(HID_T) :: xfer_prp_default
+ INTEGER(HSIZE_T), INTENT(IN), DIMENSION(*) :: dims
+ INTEGER(SIZE_T), INTENT(INOUT), DIMENSION(*) :: len
+ REAL, INTENT(INOUT), &
+ DIMENSION(dims(1),dims(2)) :: buf
+ END FUNCTION h5dread_vl_real_c
+ END INTERFACE
+
+ CALL h5dget_space_f(dset_id, tmp, error)
+ xfer_prp_default = H5P_DEFAULT_F
+ mem_space_id_default = tmp
+ file_space_id_default = tmp
+
+ IF (PRESENT(xfer_prp)) xfer_prp_default = xfer_prp
+ IF (PRESENT(mem_space_id)) mem_space_id_default = mem_space_id
+ IF (PRESENT(file_space_id)) file_space_id_default = file_space_id
+
+ hdferr = h5dread_vl_real_c(dset_id, mem_type_id, mem_space_id_default, &
+ file_space_id_default, xfer_prp_default, &
+ buf, dims, len)
+
+ END SUBROUTINE h5dread_vl_real
+
+ SUBROUTINE h5dwrite_vl_string(dset_id, mem_type_id, buf, dims, str_len, &
+ hdferr, &
+ mem_space_id, file_space_id, xfer_prp)
+ USE, INTRINSIC :: ISO_C_BINDING, ONLY : c_char
+ IMPLICIT NONE
+ INTEGER(HID_T), INTENT(IN) :: dset_id ! Dataset identifier
+ INTEGER(HID_T), INTENT(IN) :: mem_type_id ! Memory datatype identifier
+ INTEGER(HSIZE_T), INTENT(IN), DIMENSION(2) :: dims ! Number of strings
+ INTEGER(SIZE_T), INTENT(IN), DIMENSION(*) :: str_len ! Array to store the length of each element
+ CHARACTER(LEN=*), INTENT(IN), DIMENSION(dims(2)) :: buf ! Data buffer
+ INTEGER, INTENT(OUT) :: hdferr ! Error code
+ INTEGER(HID_T), OPTIONAL, INTENT(IN) :: mem_space_id ! Memory dataspace identfier
+ INTEGER(HID_T), OPTIONAL, INTENT(IN) :: file_space_id ! File dataspace identfier
+ INTEGER(HID_T), OPTIONAL, INTENT(IN) :: xfer_prp ! Transfer property list identifier
+
+ INTEGER(HID_T) :: xfer_prp_default
+ INTEGER(HID_T) :: mem_space_id_default
+ INTEGER(HID_T) :: file_space_id_default
+
+ INTERFACE
+ INTEGER FUNCTION h5dwrite_vl_string_c(dset_id, mem_type_id, &
+ mem_space_id_default, &
+ file_space_id_default, &
+ ! xfer_prp_default, tmp_buf, dims, str_len)
+ xfer_prp_default, buf, dims, str_len) &
+ BIND(C,NAME='h5dwrite_vl_string_c')
+ IMPORT :: C_CHAR
+ IMPORT :: HID_T, HSIZE_T, SIZE_T
+ IMPLICIT NONE
+ INTEGER(HID_T), INTENT(IN) :: dset_id
+ INTEGER(HID_T), INTENT(IN) :: mem_type_id
+ INTEGER(HID_T) :: mem_space_id_default
+ INTEGER(HID_T) :: file_space_id_default
+ INTEGER(HID_T) :: xfer_prp_default
+ INTEGER(HSIZE_T), INTENT(IN), DIMENSION(2) :: dims
+ INTEGER(SIZE_T), INTENT(IN), DIMENSION(*) :: str_len
+ CHARACTER(KIND=C_CHAR), DIMENSION(dims(2)) :: buf
+ END FUNCTION
+ END INTERFACE
+
+
+ xfer_prp_default = H5P_DEFAULT_F
+ mem_space_id_default = H5S_ALL_F
+ file_space_id_default = H5S_ALL_F
+
+ IF (PRESENT(xfer_prp)) xfer_prp_default = xfer_prp
+ IF (PRESENT(mem_space_id)) mem_space_id_default = mem_space_id
+ IF (PRESENT(file_space_id)) file_space_id_default = file_space_id
+
+ hdferr = h5dwrite_vl_string_c(dset_id, mem_type_id, mem_space_id_default, &
+ file_space_id_default, xfer_prp_default, &
+ buf, dims, str_len)
+
+ END SUBROUTINE h5dwrite_vl_string
+
+ SUBROUTINE h5dread_vl_string(dset_id, mem_type_id, buf, dims, str_len, &
+ hdferr, mem_space_id, file_space_id, xfer_prp)
+ IMPLICIT NONE
+ INTEGER(HID_T), INTENT(IN) :: dset_id ! Dataset identifier
+ INTEGER(HID_T), INTENT(IN) :: mem_type_id ! Memory datatype identifier
+ INTEGER(HSIZE_T), INTENT(IN), DIMENSION(2) :: dims ! number of strings
+ INTEGER(SIZE_T), INTENT(OUT), DIMENSION(*) :: str_len ! Array to store
+ ! the length of each
+ ! element
+ CHARACTER(LEN=*), INTENT(OUT), &
+ DIMENSION(dims(2)) :: buf ! Data buffer
+ INTEGER, INTENT(OUT) :: hdferr ! Error code
+ INTEGER(HID_T), OPTIONAL, INTENT(IN) :: mem_space_id ! Memory dataspace identfier
+ INTEGER(HID_T), OPTIONAL, INTENT(IN) :: file_space_id ! File dataspace identfier
+ INTEGER(HID_T), OPTIONAL, INTENT(IN) :: xfer_prp ! Transfer property list identifier
+
+ INTEGER(HID_T) :: xfer_prp_default
+ INTEGER(HID_T) :: mem_space_id_default
+ INTEGER(HID_T) :: file_space_id_default
+
+ INTERFACE
+ INTEGER FUNCTION h5dread_vl_string_c(dset_id, mem_type_id, &
+ mem_space_id_default, &
+ file_space_id_default, &
+ xfer_prp_default, buf, dims, str_len) &
+ BIND(C,NAME='h5dread_vl_string_c')
+ IMPORT :: c_char
+ IMPORT :: HID_T, HSIZE_T, SIZE_T
+ IMPLICIT NONE
+ INTEGER(HID_T), INTENT(IN) :: dset_id
+ INTEGER(HID_T), INTENT(IN) :: mem_type_id
+ INTEGER(HID_T) :: mem_space_id_default
+ INTEGER(HID_T) :: file_space_id_default
+ INTEGER(HID_T) :: xfer_prp_default
+ INTEGER(HSIZE_T), INTENT(IN), DIMENSION(2) :: dims
+ INTEGER(SIZE_T), INTENT(OUT), DIMENSION(*) :: str_len
+ CHARACTER(KIND=C_CHAR), DIMENSION(dims(2)) :: buf
+ END FUNCTION h5dread_vl_string_c
+ END INTERFACE
+
+ xfer_prp_default = H5P_DEFAULT_F
+ mem_space_id_default = H5S_ALL_F
+ file_space_id_default = H5S_ALL_F
+
+ IF (PRESENT(xfer_prp)) xfer_prp_default = xfer_prp
+ IF (PRESENT(mem_space_id)) mem_space_id_default = mem_space_id
+ IF (PRESENT(file_space_id)) file_space_id_default = file_space_id
+
+ hdferr = h5dread_vl_string_c(dset_id, mem_type_id, mem_space_id_default, &
+ file_space_id_default, xfer_prp_default, &
+ buf, dims, str_len)
+ RETURN
+ END SUBROUTINE h5dread_vl_string
+
+!
+!****s* H5D/h5dget_offset_f
+!
+! NAME
+! h5dget_offset_f
+!
+! PURPOSE
+! Returns dataset address in file.
+!
+! INPUTS
+! dataset_id - Dataset identifier.
+! OUTPUTS
+! offset - The offset in bytes.
+! hdferr - Returns 0 if successful and -1 if fails.
+!
+! AUTHOR
+! M. Scot Breitenfeld
+! April 16, 2015
+!
+! SOURCE
+ SUBROUTINE h5dget_offset_f(dset_id, offset, hdferr)
+ IMPLICIT NONE
+ INTEGER(HID_T), INTENT(IN) :: dset_id
+ INTEGER(HADDR_T), INTENT(OUT) :: offset
+ INTEGER, INTENT(OUT) :: hdferr
+!*****
+ INTERFACE
+ INTEGER(HADDR_T) FUNCTION h5dget_offset(dset_id) BIND(C,NAME='H5Dget_offset')
+ IMPORT :: HID_T, HADDR_T
+ IMPLICIT NONE
+ INTEGER(HID_T), INTENT(IN), VALUE :: dset_id
+ END FUNCTION h5dget_offset
+ END INTERFACE
+
+ offset = h5dget_offset(dset_id)
+
+ hdferr = 0
+ IF(offset .LT. 0) hdferr = -1
+
+ END SUBROUTINE h5dget_offset_f
+
+!
+!****s* H5D/h5dget_space_f
+!
+! NAME
+! h5dget_space_f
+!
+! PURPOSE
+! Returns an identifier for a copy of the dataspace for a
+! dataset.
+!
+! INPUTS
+! dataset_id - dataset identifier
+! OUTPUTS
+! dataspace_id - dataspace identifier
+! hdferr - Returns 0 if successful and -1 if fails
+!
+! AUTHOR
+! Elena Pourmal
+! August 12, 1999
+!
+! HISTORY
+! Explicit Fortran interfaces were added for
+! called C functions (it is needed for Windows
+! port). February 28, 2001
+!
+! SOURCE
+ SUBROUTINE h5dget_space_f(dataset_id, dataspace_id, hdferr)
+ IMPLICIT NONE
+ INTEGER(HID_T), INTENT(IN) :: dataset_id ! Dataset identifier
+ INTEGER(HID_T), INTENT(OUT) :: dataspace_id ! Dataspace identifier
+ INTEGER, INTENT(OUT) :: hdferr ! Error code
+!*****
+ INTERFACE
+ INTEGER FUNCTION h5dget_space_c(dataset_id, dataspace_id) BIND(C,NAME='h5dget_space_c')
+ IMPORT :: HID_T
+ IMPLICIT NONE
+ INTEGER(HID_T), INTENT(IN) :: dataset_id
+ INTEGER(HID_T), INTENT(OUT) :: dataspace_id
+ END FUNCTION h5dget_space_c
+ END INTERFACE
+
+ hdferr = h5dget_space_c(dataset_id, dataspace_id)
+ END SUBROUTINE h5dget_space_f
+
+!****s* H5D/h5dget_access_plist_f
+!
+! NAME
+! h5dget_access_plist_f
+!
+! PURPOSE
+! Returns a copy of the dataset creation property list.
+!
+! INPUTS
+! dset_id - Dataset identifier
+!
+! OUTPUTS
+! plist_id - Dataset access property list identifier
+! hdferr - Returns 0 if successful and -1 if fails
+!
+! AUTHOR
+! M. Scot Breitenfeld
+! April 13, 2009
+!
+! SOURCE
+ SUBROUTINE h5dget_access_plist_f(dset_id, plist_id, hdferr)
+ IMPLICIT NONE
+ INTEGER(HID_T), INTENT(IN) :: dset_id
+ INTEGER(HID_T), INTENT(OUT) :: plist_id
+ INTEGER , INTENT(OUT) :: hdferr
+ !*****
+ INTERFACE
+ INTEGER FUNCTION h5dget_access_plist_c(dset_id, plist_id) BIND(C,NAME='h5dget_access_plist_c')
+ IMPORT :: HID_T
+ IMPLICIT NONE
+ INTEGER(HID_T), INTENT(IN) :: dset_id
+ INTEGER(HID_T), INTENT(OUT) :: plist_id
+ END FUNCTION h5dget_access_plist_c
+ END INTERFACE
+
+ hdferr = h5dget_access_plist_c(dset_id, plist_id)
+
+ END SUBROUTINE h5dget_access_plist_f
+
+
+ SUBROUTINE h5dwrite_reference_obj(dset_id, mem_type_id, buf, dims, hdferr, &
+ mem_space_id, file_space_id, xfer_prp)
+ USE, INTRINSIC :: ISO_C_BINDING
+ IMPLICIT NONE
+ INTEGER(HID_T), INTENT(IN) :: dset_id ! Dataset identifier
+ INTEGER(HID_T), INTENT(IN) :: mem_type_id ! Memory datatype identifier
+ INTEGER(HSIZE_T), DIMENSION(*), INTENT(IN) :: dims ! size of the bufffer buf
+ TYPE(hobj_ref_t_f), DIMENSION(dims(1)), INTENT(IN), TARGET :: buf ! Data buffer
+ INTEGER, INTENT(OUT) :: hdferr ! Error code
+ INTEGER(HID_T), OPTIONAL, INTENT(IN) :: mem_space_id ! Memory dataspace identfier
+ INTEGER(HID_T), OPTIONAL, INTENT(IN) :: file_space_id ! File dataspace identfier
+ INTEGER(HID_T), OPTIONAL, INTENT(IN) :: xfer_prp ! Transfer property list identifier
+
+ INTEGER(HID_T) :: xfer_prp_default
+ INTEGER(HID_T) :: mem_space_id_default
+ INTEGER(HID_T) :: file_space_id_default
+ TYPE(C_PTR) :: f_ptr
+
+ xfer_prp_default = H5P_DEFAULT_F
+ mem_space_id_default = H5S_ALL_F
+ file_space_id_default = H5S_ALL_F
+
+ IF(PRESENT(xfer_prp)) xfer_prp_default = xfer_prp
+ IF(PRESENT(mem_space_id)) mem_space_id_default = mem_space_id
+ IF(PRESENT(file_space_id)) file_space_id_default = file_space_id
+ f_ptr = C_LOC(buf(1))
+
+ hdferr = h5dwrite_f_c(dset_id, mem_type_id, mem_space_id_default, &
+ file_space_id_default, xfer_prp_default, f_ptr)
+
+ END SUBROUTINE h5dwrite_reference_obj
+
+ SUBROUTINE h5dwrite_reference_dsetreg(dset_id, mem_type_id, buf, dims, hdferr, &
+ mem_space_id, file_space_id, xfer_prp)
+ USE, INTRINSIC :: ISO_C_BINDING
+ IMPLICIT NONE
+ INTEGER(HID_T), INTENT(IN) :: dset_id ! Dataset identifier
+ INTEGER(HID_T), INTENT(IN) :: mem_type_id ! Memory datatype identifier
+ INTEGER(HSIZE_T), DIMENSION(*), INTENT(IN) :: dims ! size of the bufffer buf
+ TYPE(hdset_reg_ref_t_f), DIMENSION(dims(1)), INTENT(IN), TARGET :: buf ! Data buffer
+ INTEGER, INTENT(OUT) :: hdferr ! Error code
+ INTEGER(HID_T), OPTIONAL, INTENT(IN) :: mem_space_id ! Memory dataspace identfier
+ INTEGER(HID_T), OPTIONAL, INTENT(IN) :: file_space_id ! File dataspace identfier
+ INTEGER(HID_T), OPTIONAL, INTENT(IN) :: xfer_prp ! Transfer property list identifier
+
+ INTEGER(HID_T) :: xfer_prp_default
+ INTEGER(HID_T) :: mem_space_id_default
+ INTEGER(HID_T) :: file_space_id_default
+ INTEGER, ALLOCATABLE, DIMENSION(:) :: ref_buf
+ INTEGER :: i
+ INTEGER(HSIZE_T) :: j
+ TYPE(C_PTR) :: f_ptr
+ INTERFACE
+ INTEGER FUNCTION h5dwrite_ref_reg_c(dset_id, mem_type_id,&
+ mem_space_id_default, &
+ file_space_id_default, xfer_prp_default, ref_buf, dims) &
+ BIND(C,NAME='h5dwrite_ref_reg_c')
+ IMPORT :: HID_T, HSIZE_T, SIZE_T
+ IMPLICIT NONE
+ INTEGER(HID_T), INTENT(IN) :: dset_id
+ INTEGER(HID_T), INTENT(IN) :: mem_type_id
+ INTEGER(HID_T) :: xfer_prp_default
+ INTEGER(HID_T) :: mem_space_id_default
+ INTEGER(HID_T) :: file_space_id_default
+ INTEGER, DIMENSION(*) :: ref_buf
+ INTEGER(HSIZE_T), DIMENSION(*) :: dims
+ END FUNCTION h5dwrite_ref_reg_c
+ END INTERFACE
+ xfer_prp_default = H5P_DEFAULT_F
+ mem_space_id_default = H5S_ALL_F
+ file_space_id_default = H5S_ALL_F
+
+ IF(PRESENT(xfer_prp)) xfer_prp_default = xfer_prp
+ IF(PRESENT(mem_space_id)) mem_space_id_default = mem_space_id
+ IF(PRESENT(file_space_id)) file_space_id_default = file_space_id
+ f_ptr = C_LOC(buf(1))
+
+ ALLOCATE(ref_buf(REF_REG_BUF_LEN*dims(1)), stat=hdferr)
+ IF (hdferr .NE. 0 ) THEN
+ hdferr = -1
+ RETURN
+ ELSE
+ DO j = 1, dims(1)
+ DO i = 1, REF_REG_BUF_LEN
+ ref_buf(REF_REG_BUF_LEN*(j-1) + i) = buf(j)%ref(i)
+ ENDDO
+ ENDDO
+ ENDIF
+ hdferr = h5dwrite_ref_reg_c(dset_id, mem_type_id, mem_space_id_default, &
+ file_space_id_default, xfer_prp_default, ref_buf, dims)
+ DEALLOCATE(ref_buf)
+
+ END SUBROUTINE h5dwrite_reference_dsetreg
+
+ SUBROUTINE h5dwrite_char_scalar(dset_id, mem_type_id, buf, dims, hdferr, &
+ mem_space_id, file_space_id, xfer_prp)
+ USE, INTRINSIC :: ISO_C_BINDING
+ IMPLICIT NONE
+ INTEGER(HID_T), INTENT(IN) :: dset_id ! Dataset identifier
+ INTEGER(HID_T), INTENT(IN) :: mem_type_id ! Memory datatype identifier
+ INTEGER(HSIZE_T), INTENT(IN), DIMENSION(*) :: dims
+ CHARACTER(*), INTENT(IN), TARGET :: buf ! Data buffer
+ INTEGER, INTENT(OUT) :: hdferr ! Error code
+ INTEGER(HID_T), OPTIONAL, INTENT(IN) :: mem_space_id ! Memory dataspace identfier
+ INTEGER(HID_T), OPTIONAL, INTENT(IN) :: file_space_id ! File dataspace identfier
+ INTEGER(HID_T), OPTIONAL, INTENT(IN) :: xfer_prp ! Transfer property list identifier
+
+ CALL h5dwrite_char_scalar_fix(dset_id, mem_type_id, buf, LEN(buf), dims, hdferr, &
+ mem_space_id, file_space_id, xfer_prp)
+
+ END SUBROUTINE h5dwrite_char_scalar
+
+ SUBROUTINE h5dwrite_char_scalar_fix(dset_id, mem_type_id, buf, buf_len, dims, hdferr, &
+ mem_space_id, file_space_id, xfer_prp)
+ USE, INTRINSIC :: ISO_C_BINDING
+ IMPLICIT NONE
+ INTEGER(HID_T), INTENT(IN) :: dset_id ! Dataset identifier
+ INTEGER(HID_T), INTENT(IN) :: mem_type_id ! Memory datatype identifier
+ INTEGER(HSIZE_T), INTENT(IN), DIMENSION(*) :: dims
+ INTEGER, INTENT(IN) :: buf_len
+ CHARACTER(LEN=buf_len), INTENT(IN), TARGET :: buf ! Data buffer
+ INTEGER, INTENT(OUT) :: hdferr ! Error code
+ INTEGER(HID_T), OPTIONAL, INTENT(IN) :: mem_space_id ! Memory dataspace identfier
+ INTEGER(HID_T), OPTIONAL, INTENT(IN) :: file_space_id ! File dataspace identfier
+ INTEGER(HID_T), OPTIONAL, INTENT(IN) :: xfer_prp ! Transfer property list identifier
+ INTEGER(HID_T) :: xfer_prp_default
+ INTEGER(HID_T) :: mem_space_id_default
+ INTEGER(HID_T) :: file_space_id_default
+ TYPE(C_PTR) :: f_ptr
+
+ xfer_prp_default = H5P_DEFAULT_F
+ mem_space_id_default = H5S_ALL_F
+ file_space_id_default = H5S_ALL_F
+
+ IF(PRESENT(xfer_prp)) xfer_prp_default = xfer_prp
+ IF(PRESENT(mem_space_id)) mem_space_id_default = mem_space_id
+ IF(PRESENT(file_space_id)) file_space_id_default = file_space_id
+
+ f_ptr = C_LOC(buf(1:1))
+
+ hdferr = h5dwrite_f_c(dset_id, mem_type_id, mem_space_id_default, &
+ file_space_id_default, xfer_prp_default, f_ptr)
+
+ END SUBROUTINE h5dwrite_char_scalar_fix
+
+ SUBROUTINE h5dread_reference_obj(dset_id, mem_type_id, buf, dims, hdferr, &
+ mem_space_id, file_space_id, xfer_prp)
+ USE, INTRINSIC :: ISO_C_BINDING
+ IMPLICIT NONE
+ INTEGER(HID_T), INTENT(IN) :: dset_id ! Dataset identifier
+ INTEGER(HID_T), INTENT(IN) :: mem_type_id ! Memory datatype identifier
+ INTEGER(HSIZE_T), INTENT(IN), DIMENSION(*) :: dims
+ TYPE(hobj_ref_t_f), INTENT(INOUT) , &
+ DIMENSION(dims(1)), TARGET :: buf
+ INTEGER, INTENT(OUT) :: hdferr ! Error code
+ INTEGER(HID_T), OPTIONAL, INTENT(IN) :: mem_space_id ! Memory dataspace identfier
+ INTEGER(HID_T), OPTIONAL, INTENT(IN) :: file_space_id ! File dataspace identfier
+ INTEGER(HID_T), OPTIONAL, INTENT(IN) :: xfer_prp ! Transfer property list identifier
+
+ INTEGER(HID_T) :: xfer_prp_default
+ INTEGER(HID_T) :: mem_space_id_default
+ INTEGER(HID_T) :: file_space_id_default
+ TYPE(C_PTR) :: f_ptr
+
+ xfer_prp_default = H5P_DEFAULT_F
+ mem_space_id_default = H5S_ALL_F
+ file_space_id_default = H5S_ALL_F
+
+ IF(PRESENT(xfer_prp)) xfer_prp_default = xfer_prp
+ IF(PRESENT(mem_space_id)) mem_space_id_default = mem_space_id
+ IF(PRESENT(file_space_id)) file_space_id_default = file_space_id
+ f_ptr = C_LOC(buf(1))
+
+ hdferr = h5dread_f_c(dset_id, mem_type_id, mem_space_id_default, &
+ file_space_id_default, xfer_prp_default, f_ptr)
+
+ END SUBROUTINE h5dread_reference_obj
+
+ SUBROUTINE h5dread_reference_dsetreg(dset_id, mem_type_id, buf, dims, hdferr, &
+ mem_space_id, file_space_id, xfer_prp)
+ IMPLICIT NONE
+ INTEGER(HID_T), INTENT(IN) :: dset_id ! Dataset identifier
+ INTEGER(HID_T), INTENT(IN) :: mem_type_id ! Memory datatype identifier
+ INTEGER(HSIZE_T), INTENT(IN), DIMENSION(*) :: dims
+ TYPE(hdset_reg_ref_t_f), INTENT(INOUT), &
+ DIMENSION(dims(1)), TARGET :: buf
+ INTEGER, INTENT(OUT) :: hdferr ! Error code
+ INTEGER(HID_T), OPTIONAL, INTENT(IN) :: mem_space_id ! Memory dataspace identfier
+ INTEGER(HID_T), OPTIONAL, INTENT(IN) :: file_space_id ! File dataspace identfier
+ INTEGER(HID_T), OPTIONAL, INTENT(IN) :: xfer_prp ! Transfer property list identifier
+ INTEGER(HID_T) :: xfer_prp_default
+ INTEGER(HID_T) :: mem_space_id_default
+ INTEGER(HID_T) :: file_space_id_default
+
+ INTEGER, ALLOCATABLE, DIMENSION(:) :: ref_buf
+ INTEGER :: i
+ INTEGER(HSIZE_T) :: j
+ INTERFACE
+ INTEGER FUNCTION h5dread_ref_reg_c(dset_id, mem_type_id,&
+ mem_space_id_default, &
+ file_space_id_default, xfer_prp_default, ref_buf, dims) &
+ BIND(C,NAME='h5dread_ref_reg_c')
+ IMPORT :: HID_T, HSIZE_T
+ IMPLICIT NONE
+ INTEGER(HID_T), INTENT(IN) :: dset_id
+ INTEGER(HID_T), INTENT(IN) :: mem_type_id
+ INTEGER(HID_T) :: xfer_prp_default
+ INTEGER(HID_T) :: mem_space_id_default
+ INTEGER(HID_T) :: file_space_id_default
+ INTEGER(HSIZE_T), INTENT(IN), DIMENSION(*) :: dims
+ INTEGER, DIMENSION(*) :: ref_buf
+ END FUNCTION h5dread_ref_reg_c
+ END INTERFACE
+
+ ALLOCATE(ref_buf(REF_REG_BUF_LEN*dims(1)), stat=hdferr)
+ IF (hdferr .NE. 0) THEN
+ hdferr = -1
+ RETURN
+ ENDIF
+
+ xfer_prp_default = H5P_DEFAULT_F
+ mem_space_id_default = H5S_ALL_F
+ file_space_id_default = H5S_ALL_F
+
+ IF(PRESENT(xfer_prp)) xfer_prp_default = xfer_prp
+ IF(PRESENT(mem_space_id)) mem_space_id_default = mem_space_id
+ IF(PRESENT(file_space_id)) file_space_id_default = file_space_id
+
+ hdferr = h5dread_ref_reg_c(dset_id, mem_type_id, mem_space_id_default, &
+ file_space_id_default, xfer_prp_default, ref_buf, dims)
+
+ DO j = 1, dims(1)
+ DO i = 1, REF_REG_BUF_LEN
+ buf(j)%ref(i) = ref_buf(REF_REG_BUF_LEN*(j-1) + i)
+ ENDDO
+ ENDDO
+ DEALLOCATE(ref_buf)
+
+ END SUBROUTINE h5dread_reference_dsetreg
+
+ SUBROUTINE h5dread_char_scalar(dset_id, mem_type_id, buf, dims, hdferr, &
+ mem_space_id, file_space_id, xfer_prp)
+ USE, INTRINSIC :: ISO_C_BINDING
+ IMPLICIT NONE
+ INTEGER(HID_T), INTENT(IN) :: dset_id ! Dataset identifier
+ INTEGER(HID_T), INTENT(IN) :: mem_type_id ! Memory datatype identifier
+ INTEGER(HSIZE_T), INTENT(IN), DIMENSION(*) :: dims
+ CHARACTER(LEN=*), INTENT(INOUT) :: buf ! Data buffer
+ INTEGER, INTENT(OUT) :: hdferr ! Error code
+ INTEGER(HID_T), OPTIONAL, INTENT(IN) :: mem_space_id ! Memory dataspace identfier
+ INTEGER(HID_T), OPTIONAL, INTENT(IN) :: file_space_id ! File dataspace identfier
+ INTEGER(HID_T), OPTIONAL, INTENT(IN) :: xfer_prp ! Transfer property list identifier
+
+ INTEGER(HID_T) :: xfer_prp_default
+ INTEGER(HID_T) :: mem_space_id_default
+ INTEGER(HID_T) :: file_space_id_default
+
+ xfer_prp_default = H5P_DEFAULT_F
+ mem_space_id_default = H5S_ALL_F
+ file_space_id_default = H5S_ALL_F
+
+ IF(PRESENT(xfer_prp)) xfer_prp_default = xfer_prp
+ IF(PRESENT(mem_space_id)) mem_space_id_default = mem_space_id
+ IF(PRESENT(file_space_id)) file_space_id_default = file_space_id
+
+ CALL h5dread_char_scalar_fix(dset_id, mem_type_id, buf, LEN(buf), hdferr, &
+ mem_space_id_default, file_space_id_default, xfer_prp_default)
+
+ END SUBROUTINE h5dread_char_scalar
+
+ SUBROUTINE h5dread_char_scalar_fix(dset_id, mem_type_id, buf, buf_len, hdferr, &
+ mem_space_id, file_space_id, xfer_prp)
+ USE, INTRINSIC :: ISO_C_BINDING
+ IMPLICIT NONE
+ INTEGER(HID_T), INTENT(IN) :: dset_id ! Dataset identifier
+ INTEGER(HID_T), INTENT(IN) :: mem_type_id ! Memory datatype identifier
+ INTEGER, INTENT(IN) :: buf_len
+ CHARACTER(LEN=buf_len), INTENT(INOUT), TARGET :: buf ! Data buffer
+ INTEGER, INTENT(OUT) :: hdferr ! Error code
+ INTEGER(HID_T), OPTIONAL, INTENT(IN) :: mem_space_id ! Memory dataspace identfier
+ INTEGER(HID_T), OPTIONAL, INTENT(IN) :: file_space_id ! File dataspace identfier
+ INTEGER(HID_T), OPTIONAL, INTENT(IN) :: xfer_prp ! Transfer property list identifier
+
+ TYPE(C_PTR) :: f_ptr
+
+ f_ptr = C_LOC(buf(1:1))
+
+ hdferr = h5dread_f_c(dset_id, mem_type_id, mem_space_id, &
+ file_space_id, xfer_prp, f_ptr)
+
+ END SUBROUTINE h5dread_char_scalar_fix
+
+!****s* H5D (F03)/h5dwrite_f_F03
+!
+! NAME
+! h5dwrite_f_F03
+!
+! PURPOSE
+! Writes raw data from a dataset into a buffer.
+!
+! Inputs:
+! dset_id - Identifier of the dataset to write to.
+! mem_type_id - Identifier of the memory datatype.
+! buf - Buffer with data to be written to the file.
+!
+! Outputs:
+! hdferr - Returns 0 if successful and -1 if fails
+!
+! Optional parameters:
+! mem_space_id - Identifier of the memory dataspace.
+! file_space_id - Identifier of the dataset's dataspace in the file.
+! xfer_prp - Identifier of a transfer property list for this I/O operation.
+!
+! AUTHOR
+! M. Scot Breitenfeld
+! September 17, 2011
+!
+! Fortran2003 Interface:
+!! SUBROUTINE h5dwrite_f(dset_id, mem_type_id, buf, hdferr, &
+!! mem_space_id, file_space_id, xfer_prp)
+!! INTEGER(HID_T), INTENT(IN) :: dset_id
+!! INTEGER(HID_T), INTENT(IN) :: mem_type_id
+!! TYPE(C_PTR) , INTENT(IN) :: buf
+!! INTEGER , INTENT(OUT) :: hdferr
+!! INTEGER(HID_T), INTENT(IN) , OPTIONAL :: mem_space_id
+!! INTEGER(HID_T), INTENT(IN) , OPTIONAL :: file_space_id
+!! INTEGER(HID_T), INTENT(IN) , OPTIONAL :: xfer_prp
+!*****
+ SUBROUTINE h5dwrite_ptr(dset_id, mem_type_id, buf, hdferr, &
+ mem_space_id, file_space_id, xfer_prp)
+ USE, INTRINSIC :: ISO_C_BINDING
+ IMPLICIT NONE
+ INTEGER(HID_T), INTENT(IN) :: dset_id ! Dataset identifier
+ INTEGER(HID_T), INTENT(IN) :: mem_type_id ! Memory datatype identifier
+ TYPE(C_PTR), INTENT(IN) :: buf
+ INTEGER, INTENT(OUT) :: hdferr ! Error code
+ INTEGER(HID_T), OPTIONAL, INTENT(IN) :: mem_space_id ! Memory dataspace identfier
+ INTEGER(HID_T), OPTIONAL, INTENT(IN) :: file_space_id ! File dataspace identfier
+ INTEGER(HID_T), OPTIONAL, INTENT(IN) :: xfer_prp ! Transfer property list identifier
+
+ INTEGER(HID_T) :: xfer_prp_default
+ INTEGER(HID_T) :: mem_space_id_default
+ INTEGER(HID_T) :: file_space_id_default
+
+ xfer_prp_default = H5P_DEFAULT_F
+ mem_space_id_default = H5S_ALL_F
+ file_space_id_default = H5S_ALL_F
+
+ IF (PRESENT(xfer_prp)) xfer_prp_default = xfer_prp
+ IF (PRESENT(mem_space_id)) mem_space_id_default = mem_space_id
+ IF (PRESENT(file_space_id)) file_space_id_default = file_space_id
+
+ hdferr = h5dwrite_f_c(dset_id, mem_type_id, mem_space_id_default, &
+ file_space_id_default, xfer_prp_default, buf)
+
+ END SUBROUTINE h5dwrite_ptr
+
+!****s* H5D (F03)/h5dread_f_F03
+!
+! NAME
+! h5dread_f_F03
+!
+! PURPOSE
+! Reads raw data from a dataset into a buffer.
+!
+! Inputs:
+! dset_id - Identifier of the dataset read from.
+! mem_type_id - Identifier of the memory datatype.
+!
+! Outputs:
+! buf - Buffer to receive data read from file.
+! hdferr - Returns 0 if successful and -1 if fails
+!
+! Optional parameters:
+! mem_space_id - Identifier of the memory dataspace.
+! file_space_id - Identifier of the dataset's dataspace in the file.
+! xfer_prp - Identifier of a transfer property list for this I/O operation.
+!
+! AUTHOR
+! M. Scot Breitenfeld
+! September 17, 2011
+!
+! Fortran2003 Interface:
+!! SUBROUTINE h5dread_f(dset_id, mem_type_id, buf, hdferr, &
+!! mem_space_id, file_space_id, xfer_prp)
+!! INTEGER(HID_T), INTENT(IN) :: dset_id
+!! INTEGER(HID_T), INTENT(IN) :: mem_type_id
+!! TYPE(C_PTR) , INTENT(INOUT) :: buf
+!! INTEGER , INTENT(OUT) :: hdferr
+!! INTEGER(HID_T), INTENT(IN) , OPTIONAL :: mem_space_id
+!! INTEGER(HID_T), INTENT(IN) , OPTIONAL :: file_space_id
+!! INTEGER(HID_T), INTENT(IN) , OPTIONAL :: xfer_prp
+!*****
+ SUBROUTINE h5dread_ptr(dset_id, mem_type_id, buf, hdferr, &
+ mem_space_id, file_space_id, xfer_prp)
+ USE, INTRINSIC :: ISO_C_BINDING
+ IMPLICIT NONE
+ INTEGER(HID_T), INTENT(IN) :: dset_id ! Dataset identifier
+ INTEGER(HID_T), INTENT(IN) :: mem_type_id ! Memory datatype identifier
+ TYPE(C_PTR), INTENT(INOUT) :: buf
+ INTEGER, INTENT(OUT) :: hdferr ! Error code
+ INTEGER(HID_T), OPTIONAL, INTENT(IN) :: mem_space_id ! Memory dataspace identfier
+ INTEGER(HID_T), OPTIONAL, INTENT(IN) :: file_space_id ! File dataspace identfier
+ INTEGER(HID_T), OPTIONAL, INTENT(IN) :: xfer_prp ! Transfer property list identifier
+
+ INTEGER(HID_T) :: xfer_prp_default
+ INTEGER(HID_T) :: mem_space_id_default
+ INTEGER(HID_T) :: file_space_id_default
+
+ xfer_prp_default = H5P_DEFAULT_F
+ mem_space_id_default = H5S_ALL_F
+ file_space_id_default = H5S_ALL_F
+
+ IF (PRESENT(xfer_prp)) xfer_prp_default = xfer_prp
+ IF (PRESENT(mem_space_id)) mem_space_id_default = mem_space_id
+ IF (PRESENT(file_space_id)) file_space_id_default = file_space_id
+
+ hdferr = h5dread_f_c(dset_id, mem_type_id, mem_space_id_default, &
+ file_space_id_default, xfer_prp_default, buf)
+
+ END SUBROUTINE h5dread_ptr
+
+!
+! NAME
+! h5dfill_integer
+!
+! PURPOSE
+! Fills dataspace elements with a fill value in a memory buffer.
+! Only INTEGER, CHARACTER, REAL and DOUBLE PRECISION datatypes
+! of the fillvalues and buffers are supported. Buffer and fillvalue
+! are assumed to have the same datatype.
+! Only one-dimesional buffers are supported.
+!
+! Inputs:
+! fill_value - fill value
+! space_id - memory space selection identifier
+! buf - data buffer iin memory ro apply selection to
+! - of k-th dimension of the buf array
+! Outputs:
+! hdferr: - error code
+! Success: 0
+! Failure: -1
+! AUTHOR
+! Elena Pourmal
+! March 12, 2003
+!
+!
+
+ SUBROUTINE h5dfill_integer(fill_value, space_id, buf, hdferr)
+ USE, INTRINSIC :: ISO_C_BINDING
+ IMPLICIT NONE
+ INTEGER, INTENT(IN), TARGET :: fill_value ! Fill value
+ INTEGER(HID_T), INTENT(IN) :: space_id ! Memory dataspace selection identifier
+ INTEGER, INTENT(IN), DIMENSION(*), TARGET :: buf ! Memory buffer to fill in
+ INTEGER, INTENT(OUT) :: hdferr ! Error code
+
+ INTEGER(HID_T) :: fill_type_id ! Fill value datatype identifier
+ INTEGER(HID_T) :: mem_type_id ! Buffer dadtype identifier
+
+ TYPE(C_PTR) :: f_ptr_fill_value ! C pointer to fill_value
+ TYPE(C_PTR) :: f_ptr_buf ! C pointer to buf
+
+ f_ptr_fill_value = C_LOC(fill_value)
+ f_ptr_buf = C_LOC(buf(1))
+
+ fill_type_id = H5T_NATIVE_INTEGER
+ mem_type_id = H5T_NATIVE_INTEGER
+
+ hdferr = h5dfill_c(f_ptr_fill_value, fill_type_id, space_id, &
+ f_ptr_buf, mem_type_id)
+
+ END SUBROUTINE h5dfill_integer
+
+!
+! NAME
+! h5dfill_c_float
+!
+! PURPOSE
+! Fills dataspace elements with a fill value in a memory buffer.
+! Only INTEGER, CHARACTER, REAL and DOUBLE PRECISION datatypes
+! of the fillvalues and buffers are supported. Buffer and fillvalue
+! are assumed to have the same datatype.
+! Only one-dimesional buffers are supported.
+!
+! Inputs:
+! fill_value - fill value
+! space_id - memory space selection identifier
+! buf - data buffer iin memory ro apply selection to
+! - of k-th dimension of the buf array
+! Outputs:
+! hdferr: - error code
+! Success: 0
+! Failure: -1
+!
+! AUTHOR
+! Elena Pourmal
+! March 12, 2003
+!
+ SUBROUTINE h5dfill_c_float(fill_valuer, space_id, buf, hdferr)
+ USE, INTRINSIC :: ISO_C_BINDING
+ IMPLICIT NONE
+ REAL(KIND=C_FLOAT), INTENT(IN), TARGET :: fill_valuer ! Fill value
+ INTEGER(HID_T), INTENT(IN) :: space_id ! Memory dataspace selection identifier
+ REAL(KIND=C_FLOAT), INTENT(IN), DIMENSION(*), TARGET :: buf ! Memory buffer to fill in
+ INTEGER, INTENT(OUT) :: hdferr ! Error code
+
+ INTEGER(HID_T) :: fill_type_id ! Fill value datatype identifier
+ INTEGER(HID_T) :: mem_type_id ! Buffer dadtype identifier
+
+ TYPE(C_PTR) :: f_ptr_fill_valuer ! C pointer to fill_value
+ TYPE(C_PTR) :: f_ptr_buf ! C pointer to buf
+
+ f_ptr_fill_valuer = C_LOC(fill_valuer)
+ f_ptr_buf = C_LOC(buf(1))
+
+ fill_type_id = H5T_NATIVE_REAL
+ mem_type_id = H5T_NATIVE_REAL
+
+ hdferr = h5dfill_c(f_ptr_fill_valuer, fill_type_id, space_id, &
+ f_ptr_buf, mem_type_id)
+
+ END SUBROUTINE h5dfill_c_float
+
+ !----------------------------------------------------------------------
+ ! Name: h5dfill_c_double
+ !
+ ! Purpose: Fills dataspace elements with a fill value in a memory buffer.
+ ! Only INTEGER, CHARACTER, REAL and DOUBLE PRECISION datatypes
+ ! of the fillvalues and buffers are supported. Buffer and fillvalue
+ ! are assumed to have the same datatype.
+ ! Only one-dimesional buffers are supported.
+ !
+ ! Inputs:
+ ! fill_value - fill value
+ ! space_id - memory space selection identifier
+ ! buf - data buffer iin memory ro apply selection to
+ ! - of k-th dimension of the buf array
+ ! Outputs:
+ ! hdferr: - error code
+ ! Success: 0
+ ! Failure: -1
+ !
+ ! Programmer: Elena Pourmal
+ ! March 12, 2003
+ !
+ !----------------------------------------------------------------------
+
+ SUBROUTINE h5dfill_c_double(fill_value, space_id, buf, hdferr)
+ IMPLICIT NONE
+ REAL(KIND=C_DOUBLE), INTENT(IN), TARGET :: fill_value ! Fill value
+ INTEGER(HID_T), INTENT(IN) :: space_id ! Memory dataspace selection identifier
+ REAL(KIND=C_DOUBLE), INTENT(IN), DIMENSION(*), TARGET :: buf ! Memory buffer to fill in
+ INTEGER, INTENT(OUT) :: hdferr ! Error code
+
+ INTEGER(HID_T) :: fill_type_id ! Fill value datatype identifier
+ INTEGER(HID_T) :: mem_type_id ! Buffer dadtype identifier
+
+ TYPE(C_PTR) :: f_ptr_fill_valuer ! C pointer to fill_value
+ TYPE(C_PTR) :: f_ptr_buf ! C pointer to buf
+
+ f_ptr_fill_valuer = C_LOC(fill_value)
+ f_ptr_buf = C_LOC(buf(1))
+
+ fill_type_id = H5T_NATIVE_DOUBLE
+ mem_type_id = H5T_NATIVE_DOUBLE
+
+ hdferr = h5dfill_c(f_ptr_fill_valuer, fill_type_id, space_id, &
+ f_ptr_buf, mem_type_id)
+
+ END SUBROUTINE h5dfill_c_double
+
+#ifdef H5_FORTRAN_HAVE_C_LONG_DOUBLE
+ SUBROUTINE h5dfill_c_long_double(fill_value, space_id, buf, hdferr)
+ IMPLICIT NONE
+ REAL(KIND=C_LONG_DOUBLE), INTENT(IN), TARGET :: fill_value ! Fill value
+ INTEGER(HID_T), INTENT(IN) :: space_id ! Memory dataspace selection identifier
+ REAL(KIND=C_LONG_DOUBLE), INTENT(IN), DIMENSION(*), TARGET :: buf ! Memory buffer to fill in
+ INTEGER, INTENT(OUT) :: hdferr ! Error code
+
+ INTEGER(HID_T) :: fill_type_id ! Fill value datatype identifier
+ INTEGER(HID_T) :: mem_type_id ! Buffer dadtype identifier
+
+ TYPE(C_PTR) :: f_ptr_fill_valuer ! C pointer to fill_value
+ TYPE(C_PTR) :: f_ptr_buf ! C pointer to buf
+
+ f_ptr_fill_valuer = C_LOC(fill_value)
+ f_ptr_buf = C_LOC(buf(1))
+
+ fill_type_id = H5T_NATIVE_DOUBLE
+ mem_type_id = H5T_NATIVE_DOUBLE
+
+ hdferr = h5dfill_c(f_ptr_fill_valuer, fill_type_id, space_id, &
+ f_ptr_buf, mem_type_id)
+
+ END SUBROUTINE h5dfill_c_long_double
+#endif
+!
+! NAME
+! h5dfill_char
+!
+! PURPOSE
+! Fills dataspace elements with a fill value in a memory buffer.
+! Only INTEGER, CHARACTER, REAL and DOUBLE PRECISION datatypes
+! of the fillvalues and buffers are supported. Buffer and fillvalue
+! are assumed to have the same datatype.
+! Only one-dimesional buffers are supported.
+!
+! Inputs:
+! fill_value - fill value
+! space_id - memory space selection identifier
+! buf - data buffer iin memory ro apply selection to
+! - of k-th dimension of the buf array
+! Outputs:
+! hdferr: - error code
+! Success: 0
+! Failure: -1
+! AUTHOR
+! Elena Pourmal
+! March 12, 2003
+!
+ SUBROUTINE h5dfill_char(fill_value, space_id, buf, hdferr)
+ USE, INTRINSIC :: ISO_C_BINDING
+ IMPLICIT NONE
+ CHARACTER, INTENT(IN), TARGET :: fill_value ! Fill value
+ INTEGER(HID_T), INTENT(IN) :: space_id ! Memory dataspace selection identifier
+ CHARACTER, INTENT(IN), DIMENSION(*), TARGET :: buf ! Memory buffer to fill in
+ INTEGER, INTENT(OUT) :: hdferr ! Error code
+
+ INTEGER(HID_T) :: fill_type_id ! Fill value datatype identifier
+ INTEGER(HID_T) :: mem_type_id ! Buffer dadtype identifier
+
+ TYPE(C_PTR) :: f_ptr_fill_value ! C pointer to fill_value
+ TYPE(C_PTR) :: f_ptr_buf ! C pointer to buf
+
+ f_ptr_fill_value = C_LOC(fill_value)
+ f_ptr_buf = C_LOC(buf(1))
+
+ hdferr = h5dfill_c(f_ptr_fill_value, fill_type_id, space_id, &
+ f_ptr_buf, mem_type_id)
+
+ END SUBROUTINE h5dfill_char
+!
+!****s* H5D (F03)/h5dvlen_reclaim_f
+! NAME
+! h5dvlen_reclaim_f
+!
+! PURPOSE
+! Reclaims VL datatype memory buffers.
+!
+! Inputs:
+!
+! type_id - Identifier of the datatype.
+! space_id - Identifier of the dataspace.
+! plist_id - Identifier of the property list used to create the buffer.
+! buf - Pointer to the buffer to be reclaimed.
+!
+! Outputs:
+! hdferr - Returns 0 if successful and -1 if fails
+!
+! AUTHOR
+! M. Scot Breitenfeld
+! January 11, 2011
+!
+! Fortran2003 Interface:
+ SUBROUTINE h5dvlen_reclaim_f(type_id, space_id, plist_id, buf, hdferr)
+ IMPLICIT NONE
+ INTEGER(HID_T), INTENT(IN) :: type_id
+ INTEGER(HID_T), INTENT(IN) :: space_id
+ INTEGER(HID_T), INTENT(IN) :: plist_id
+ TYPE(C_PTR) , INTENT(INOUT) :: buf
+ INTEGER , INTENT(OUT) :: hdferr
+!*****
+
+ INTERFACE
+ INTEGER FUNCTION h5dvlen_reclaim_c(type_id, space_id, plist_id, buf) BIND(C, NAME='h5dvlen_reclaim_c')
+ IMPORT :: C_PTR
+ IMPORT :: HID_T
+ IMPLICIT NONE
+ INTEGER(HID_T) :: type_id
+ INTEGER(HID_T) :: space_id
+ INTEGER(HID_T) :: plist_id
+ TYPE(C_PTR), VALUE :: buf
+ END FUNCTION h5dvlen_reclaim_c
+ END INTERFACE
+
+ hdferr = H5Dvlen_reclaim_c(type_id, space_id, plist_id, buf)
+
+ END SUBROUTINE H5Dvlen_reclaim_f
+
+
+END MODULE H5D
+
+