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author | Scot Breitenfeld <brtnfld@hdfgroup.org> | 2022-10-11 12:25:05 (GMT) |
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committer | GitHub <noreply@github.com> | 2022-10-11 12:25:05 (GMT) |
commit | 64e69d9291e58f56152f91e58b847deb2c172e26 (patch) | |
tree | 7daebcbec09e89f282ff9896c9877b41608f02bc /fortran/src | |
parent | 306db409d44cccbeaff1cd5acb1a99173ac8b185 (diff) | |
download | hdf5-64e69d9291e58f56152f91e58b847deb2c172e26.zip hdf5-64e69d9291e58f56152f91e58b847deb2c172e26.tar.gz hdf5-64e69d9291e58f56152f91e58b847deb2c172e26.tar.bz2 |
Implemented C matching (and general) H5Dfill Fortran wrappers (#2152)
Diffstat (limited to 'fortran/src')
-rw-r--r-- | fortran/src/H5Df.c | 45 | ||||
-rw-r--r-- | fortran/src/H5Dff.F90 | 95 | ||||
-rw-r--r-- | fortran/src/H5f90proto.h | 2 | ||||
-rw-r--r-- | fortran/src/hdf5_fortrandll.def.in | 6 |
4 files changed, 79 insertions, 69 deletions
diff --git a/fortran/src/H5Df.c b/fortran/src/H5Df.c index ba3e5d4..75dd014 100644 --- a/fortran/src/H5Df.c +++ b/fortran/src/H5Df.c @@ -1047,51 +1047,6 @@ DONE: return ret_value; } -/****if* H5Df/h5dfill_c - * NAME - * h5dfill_c - * PURPOSE - * Call H5Dfill to fill memory buffer with a fill value - * INPUTS - * fill_value - fill value - * fill_type_id - fill value datatype identifier - * space_id - memory space selection identifier - * buf - memory buffer to fill - * mem_type_id - memory buffer dtatype identifier - * RETURNS - * 0 on success, -1 on failure - * AUTHOR - * Elena Pourmal - * Wednesday, March 12, 2003 - * HISTORY - * - * SOURCE - */ -int_f -h5dfill_c(void *fill_value, hid_t_f *fill_type_id, hid_t_f *space_id, void *buf, hid_t_f *mem_type_id) -/******/ -{ - int ret_value = -1; - herr_t ret; - hid_t c_fill_type_id; - hid_t c_mem_type_id; - hid_t c_space_id; - - c_fill_type_id = (hid_t)*fill_type_id; - c_mem_type_id = (hid_t)*mem_type_id; - c_space_id = (hid_t)*space_id; - - /* - * Call H5Dfill function. - */ - ret = H5Dfill(fill_value, c_fill_type_id, buf, c_mem_type_id, c_space_id); - - if (ret < 0) - return ret_value; - ret_value = 0; - return ret_value; -} - /****if* H5Df/h5dget_space_status_c * NAME * h5dget_space_status_c diff --git a/fortran/src/H5Dff.F90 b/fortran/src/H5Dff.F90 index 0da0092..1a2c9f3 100644 --- a/fortran/src/H5Dff.F90 +++ b/fortran/src/H5Dff.F90 @@ -93,7 +93,7 @@ MODULE H5D PRIVATE h5dwrite_vl_integer, h5dwrite_vl_real, h5dwrite_vl_string PRIVATE h5dwrite_reference_obj, h5dwrite_reference_dsetreg, h5dwrite_char_scalar, h5dwrite_ptr PRIVATE h5dread_reference_obj, h5dread_reference_dsetreg, h5dread_char_scalar, h5dread_ptr - PRIVATE h5dfill_integer, h5dfill_c_float, h5dfill_c_double, h5dfill_char + PRIVATE h5dfill_integer, h5dfill_c_float, h5dfill_c_double, h5dfill_char, h5dfill_ptr #if H5_FORTRAN_C_LONG_DOUBLE_IS_UNIQUE!=0 PRIVATE h5dfill_c_long_double #endif @@ -183,6 +183,7 @@ MODULE H5D MODULE PROCEDURE h5dfill_c_long_double #endif MODULE PROCEDURE h5dfill_char + MODULE PROCEDURE h5dfill_ptr END INTERFACE ! Interface for the function used to pass the C pointer of the buffer @@ -1220,6 +1221,8 @@ CONTAINS !! Only INTEGER, CHARACTER, REAL and DOUBLE PRECISION datatypes of the fillvalues and buffers are supported. !! Buffer and fillvalue are assumed to have the same datatype. Only one-dimesional buffers are supported. !! +!! \attention \fortran_obsolete +!! !! \param fill_value Fill value. !! \param space_id Identifier of the memory datatype. !! \param buf Buffer to receive data read from file. @@ -1233,6 +1236,31 @@ CONTAINS TYPE(TYPE), INTENT(OUT), DIMENSION(*) :: buf INTEGER, INTENT(OUT) :: hdferr END SUBROUTINE h5dfill_f +!> +!! \ingroup FH5D +!! +!! \brief Fills dataspace elements with a fill value in a memory buffer. +!! +!! \attention \fortran_approved +!! +!! \param fill_value Pointer to the fill value to be used. +!! \param fill_type_id Fill value datatype identifier, +!! \param buf Pointer to the memory buffer containing the selection to be filled. +!! \param buf_type_id Datatype of dataspace elements to be filled. +!! \param space_id Dataspace identifier. +!! \param hdferr \fortran_error +!! +!! See C API: @ref herr_t H5Dfill(const void *fill, hid_t fill_type_id, void *buf, hid_t buf_type_id, hid_t space_id); +!! + SUBROUTINE h5dfill_f(fill_value, fill_type_id, buf, buf_type_id, space_id, hdferr) + USE, INTRINSIC :: ISO_C_BINDING, ONLY : C_PTR + IMPLICIT NONE + TYPE(C_PTR) :: fill_value + INTEGER(HID_T), INTENT(IN) :: fill_type_id + TYPE(C_PTR) :: buf + INTEGER(HID_T), INTENT(IN) :: buf_type_id + INTEGER(HID_T), INTENT(IN) :: space_id + END SUBROUTINE h5dfill_f #else @@ -1587,12 +1615,39 @@ CONTAINS END SUBROUTINE h5dread_ptr + SUBROUTINE h5dfill_ptr(fill_value, fill_type_id, buf, buf_type_id, space_id, hdferr) + USE, INTRINSIC :: ISO_C_BINDING, ONLY : C_PTR + IMPLICIT NONE + TYPE(C_PTR) :: fill_value + INTEGER(HID_T), INTENT(IN) :: fill_type_id + TYPE(C_PTR) :: buf + INTEGER(HID_T), INTENT(IN) :: buf_type_id + INTEGER(HID_T), INTENT(IN) :: space_id + INTEGER, INTENT(OUT) :: hdferr + + INTERFACE + INTEGER FUNCTION h5dfill(fill_value, fill_type_id, buf, buf_type_id, space_id) & + BIND(C,NAME='H5Dfill') + IMPORT :: HID_T, C_PTR + IMPLICIT NONE + TYPE(C_PTR) , VALUE :: fill_value + INTEGER(HID_T), VALUE :: fill_type_id + TYPE(C_PTR) , VALUE :: buf + INTEGER(HID_T), VALUE :: buf_type_id + INTEGER(HID_T), VALUE :: space_id + END FUNCTION h5dfill + END INTERFACE + + hdferr = INT(h5dfill(fill_value, fill_type_id, buf, buf_type_id, space_id)) + + END SUBROUTINE h5dfill_ptr + SUBROUTINE h5dfill_integer(fill_value, space_id, buf, hdferr) USE, INTRINSIC :: ISO_C_BINDING, ONLY : C_PTR IMPLICIT NONE INTEGER, INTENT(IN), TARGET :: fill_value ! Fill value INTEGER(HID_T), INTENT(IN) :: space_id ! Memory dataspace selection identifier - INTEGER, INTENT(IN), DIMENSION(*), TARGET :: buf ! Memory buffer to fill in + INTEGER, INTENT(OUT), DIMENSION(*), TARGET :: buf ! Memory buffer to fill in INTEGER, INTENT(OUT) :: hdferr ! Error code INTEGER(HID_T) :: fill_type_id ! Fill value datatype identifier @@ -1607,15 +1662,14 @@ CONTAINS fill_type_id = H5T_NATIVE_INTEGER mem_type_id = H5T_NATIVE_INTEGER - hdferr = h5dfill_c(f_ptr_fill_value, fill_type_id, space_id, & - f_ptr_buf, mem_type_id) + CALL h5dfill_ptr(f_ptr_fill_value, fill_type_id, f_ptr_buf, mem_type_id, space_id, hdferr) END SUBROUTINE h5dfill_integer - SUBROUTINE h5dfill_c_float(fill_valuer, space_id, buf, hdferr) + SUBROUTINE h5dfill_c_float(fill_value, space_id, buf, hdferr) USE, INTRINSIC :: ISO_C_BINDING, ONLY : C_PTR IMPLICIT NONE - REAL(KIND=C_FLOAT), INTENT(IN), TARGET :: fill_valuer + REAL(KIND=C_FLOAT), INTENT(IN), TARGET :: fill_value INTEGER(HID_T), INTENT(IN) :: space_id REAL(KIND=C_FLOAT), INTENT(OUT), DIMENSION(*), TARGET :: buf INTEGER, INTENT(OUT) :: hdferr @@ -1623,17 +1677,16 @@ CONTAINS INTEGER(HID_T) :: fill_type_id ! Fill value datatype identifier INTEGER(HID_T) :: mem_type_id ! Buffer dadtype identifier - TYPE(C_PTR) :: f_ptr_fill_valuer ! C pointer to fill_value + TYPE(C_PTR) :: f_ptr_fill_value ! C pointer to fill_value TYPE(C_PTR) :: f_ptr_buf ! C pointer to buf - f_ptr_fill_valuer = C_LOC(fill_valuer) + f_ptr_fill_value = C_LOC(fill_value) f_ptr_buf = C_LOC(buf(1)) fill_type_id = H5T_NATIVE_REAL mem_type_id = H5T_NATIVE_REAL - hdferr = h5dfill_c(f_ptr_fill_valuer, fill_type_id, space_id, & - f_ptr_buf, mem_type_id) + CALL h5dfill_ptr(f_ptr_fill_value, fill_type_id, f_ptr_buf, mem_type_id, space_id, hdferr) END SUBROUTINE h5dfill_c_float @@ -1647,17 +1700,16 @@ CONTAINS INTEGER(HID_T) :: fill_type_id ! Fill value datatype identifier INTEGER(HID_T) :: mem_type_id ! Buffer dadtype identifier - TYPE(C_PTR) :: f_ptr_fill_valuer ! C pointer to fill_value + TYPE(C_PTR) :: f_ptr_fill_value ! C pointer to fill_value TYPE(C_PTR) :: f_ptr_buf ! C pointer to buf - f_ptr_fill_valuer = C_LOC(fill_value) + f_ptr_fill_value = C_LOC(fill_value) f_ptr_buf = C_LOC(buf(1)) fill_type_id = H5T_NATIVE_DOUBLE mem_type_id = H5T_NATIVE_DOUBLE - hdferr = h5dfill_c(f_ptr_fill_valuer, fill_type_id, space_id, & - f_ptr_buf, mem_type_id) + CALL h5dfill_ptr(f_ptr_fill_value, fill_type_id, f_ptr_buf, mem_type_id, space_id, hdferr) END SUBROUTINE h5dfill_c_double @@ -1672,22 +1724,21 @@ CONTAINS INTEGER(HID_T) :: fill_type_id ! Fill value datatype identifier INTEGER(HID_T) :: mem_type_id ! Buffer dadtype identifier - TYPE(C_PTR) :: f_ptr_fill_valuer ! C pointer to fill_value + TYPE(C_PTR) :: f_ptr_fill_value ! C pointer to fill_value TYPE(C_PTR) :: f_ptr_buf ! C pointer to buf - f_ptr_fill_valuer = C_LOC(fill_value) + f_ptr_fill_value = C_LOC(fill_value) f_ptr_buf = C_LOC(buf(1)) fill_type_id = H5T_NATIVE_DOUBLE mem_type_id = H5T_NATIVE_DOUBLE - hdferr = h5dfill_c(f_ptr_fill_valuer, fill_type_id, space_id, & - f_ptr_buf, mem_type_id) + CALL h5dfill_ptr(f_ptr_fill_value, fill_type_id, f_ptr_buf, mem_type_id, space_id, hdferr) END SUBROUTINE h5dfill_c_long_double #endif - SUBROUTINE h5dfill_char(fill_value, space_id, buf, hdferr) + SUBROUTINE h5dfill_char(fill_value, space_id, buf, hdferr) USE, INTRINSIC :: ISO_C_BINDING, ONLY : C_PTR IMPLICIT NONE CHARACTER, INTENT(IN), TARGET :: fill_value @@ -1704,8 +1755,10 @@ CONTAINS f_ptr_fill_value = C_LOC(fill_value) f_ptr_buf = C_LOC(buf(1)) - hdferr = h5dfill_c(f_ptr_fill_value, fill_type_id, space_id, & - f_ptr_buf, mem_type_id) + fill_type_id = H5T_NATIVE_CHARACTER + mem_type_id = H5T_NATIVE_CHARACTER + + CALL h5dfill_ptr(f_ptr_fill_value, fill_type_id, f_ptr_buf, mem_type_id, space_id, hdferr) END SUBROUTINE h5dfill_char diff --git a/fortran/src/H5f90proto.h b/fortran/src/H5f90proto.h index 3cfba71..1a9a854 100644 --- a/fortran/src/H5f90proto.h +++ b/fortran/src/H5f90proto.h @@ -175,8 +175,6 @@ H5_FCDLL int_f h5dget_create_plist_c(hid_t_f *dset_id, hid_t_f *plist_id); H5_FCDLL int_f h5dset_extent_c(hid_t_f *dset_id, hsize_t_f *dims); H5_FCDLL int_f h5dvlen_get_max_len_c(hid_t_f *dataset_id, hid_t_f *type_id, hid_t_f *space_id, size_t_f *len); H5_FCDLL int_f h5dget_storage_size_c(hid_t_f *dataset_id, hsize_t_f *size); -H5_FCDLL int_f h5dfill_c(void *fill_value, hid_t_f *fill_type_id, hid_t_f *space_id, void *buf, - hid_t_f *mem_type_id); H5_FCDLL int_f h5dget_space_status_c(hid_t_f *dset_id, int_f *flag); H5_FCDLL int_f h5dcreate_anon_c(hid_t_f *loc_id, hid_t_f *type_id, hid_t_f *space_id, hid_t_f *dcpl_id, hid_t_f *dapl_id, hid_t_f *dset_id); diff --git a/fortran/src/hdf5_fortrandll.def.in b/fortran/src/hdf5_fortrandll.def.in index f61f74b..7743579 100644 --- a/fortran/src/hdf5_fortrandll.def.in +++ b/fortran/src/hdf5_fortrandll.def.in @@ -61,8 +61,12 @@ H5D_mp_H5DWRITE_VL_REAL H5D_mp_H5DREAD_VL_REAL H5D_mp_H5DWRITE_VL_STRING H5D_mp_H5DREAD_VL_STRING -H5D_mp_H5DFILL_CHAR +H5D_mp_H5DFILL_PTR H5D_mp_H5DFILL_INTEGER +H5D_mp_H5DFILL_C_FLOAT +H5D_mp_H5DFILL_C_DOUBLE +H5D_mp_H5DFILL_C_LONG_DOUBLE +H5D_mp_H5DFILL_CHAR H5D_mp_H5DGET_SPACE_STATUS_F H5D_mp_H5DCREATE_ANON_F H5D_mp_H5DGET_OFFSET_F |