Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)

* commit '5ad3891d9b861593ebe25d540bed2d913eb83aba':
  Remove ' ' (typo).
  Code improvement
  Removed an extra "using" statement
  Adding documentation
  More changes to align with incoming selection improvements.
  Added C++ wrapper for H5Ovisit2
  Adding a C++ wrapper

3 files changed, 0 insertions, 468 deletions

diff --git a/fortran/src/H5Sf.c b/fortran/src/H5Sf.c
index 2eae0d9..96540f7 100644
--- a/fortran/src/H5Sf.c
+++ b/fortran/src/H5Sf.c
@@ -995,167 +995,6 @@ done:
 }
 
 
-#ifdef NEW_HYPERSLAB_API
-/****if* H5Sf/h5scombine_hyperslab_c
- * NAME
- *  h5scombine_hyperslab_c
- * PURPOSE
- *  Call H5Scombine_hyperslab
- * INPUTS
- *  space_id - identifier of the dataspace
- *  operator - defines how the new selection is combined
- *  start    - offset of start of hyperslab
- *  count    - number of blocks included in the hyperslab
- *  stride   - hyperslab stride (interval between blocks)
- *  block    - size of block in the hyperslab
- * OUTPUTS
- *  hyper_id - identifier for the new dataspace
- * RETURNS
- *  0 on success, -1 on failure
- * AUTHOR
- *  Elena Pourmal
- *  Monday, October 7, 2002
- * HISTORY
- *
- * SOURCE
-*/
-
-int_f
-h5scombine_hyperslab_c ( hid_t_f *space_id , int_f *op, hsize_t_f *start, hsize_t_f *count, hsize_t_f *stride, hsize_t_f *block, hid_t_f *hyper_id)
-/******/
-{
-  int ret_value = -1;
-  hid_t c_space_id;
-  hid_t c_hyper_id;
-  hsize_t *c_start = NULL;
-  hsize_t *c_count = NULL;
-  hsize_t *c_stride = NULL;
-  hsize_t *c_block = NULL;
-
-  H5S_seloper_t c_op;
-  herr_t  status;
-  int rank;
-  int i;
-
-  rank = H5Sget_simple_extent_ndims(*space_id);
-  if (rank < 0 ) return ret_value;
-  c_start = (hsize_t *)HDmalloc(sizeof(hsize_t)*rank);
-  if (c_start == NULL) goto DONE;
-
-  c_count = (hsize_t *)HDmalloc(sizeof(hsize_t)*rank);
-  if (c_count == NULL) goto DONE;
-
-  c_stride = (hsize_t *)HDmalloc(sizeof(hsize_t)*rank);
-  if (c_stride == NULL) goto DONE;
-
-  c_block = (hsize_t *)HDmalloc(sizeof(hsize_t)*rank);
-  if (c_block == NULL) goto DONE;
-
-
-  /*
-   * Reverse dimensions due to C-FORTRAN storage order.
-   */
-
-  for (i=0; i < rank; i++) {
-      int t= (rank - i) - 1;
-      c_start[i] = (hsize_t)start[t];
-      c_count[i] = (hsize_t)count[t];
-      c_stride[i] = (hsize_t)stride[t];
-      c_block[i] = (hsize_t)block[t];
-  }
-
-   c_op = (H5S_seloper_t)*op;
-
-  c_space_id = (hid_t)*space_id;
-  c_hyper_id = H5Scombine_hyperslab(c_space_id, c_op, c_start, c_stride, c_count, c_block);
-  if ( c_hyper_id < 0  ) goto DONE;
-  *hyper_id = (hid_t_f)c_hyper_id;
-  ret_value = 0;
-DONE:
-  if(c_start != NULL) HDfree(c_start);
-  if(c_count != NULL) HDfree(c_count);
-  if(c_stride!= NULL) HDfree(c_stride);
-  if(c_block != NULL) HDfree(c_block);
-  return ret_value;
-}
-/****if* H5Sf/h5scombine_select_c
- * NAME
- *  h5scombine_select_c
- * PURPOSE
- *  Call H5Scombine_ select
- * INPUTS
- *  space1_id - identifier of the first dataspace
- *  operator  - defines how the new selection is combined
- *  space2_id - identifier of the second dataspace
- * OUTPUTS
- *  ds_id     - identifier for the new dataspace
- * RETURNS
- *  0 on success, -1 on failure
- * AUTHOR
- *  Elena Pourmal
- *  Monday, October 7, 2002
- * HISTORY
- *
- * SOURCE
-*/
-
-int_f
-h5scombine_select_c ( hid_t_f *space1_id , int_f *op, hid_t_f *space2_id, hid_t_f *ds_id)
-/******/
-{
-  int ret_value = -1;
-  hid_t c_space1_id;
-  hid_t c_space2_id;
-  hid_t c_ds_id;
-  H5S_seloper_t c_op;
-
-  c_op = (H5S_seloper_t)*op;
-
-  c_space1_id = (hid_t)*space1_id;
-  c_space2_id = (hid_t)*space2_id;
-  c_ds_id = H5Scombine_select(c_space1_id, c_op, c_space2_id);
-  if ( c_ds_id < 0  ) return ret_value;
-  *ds_id = (hid_t_f)c_ds_id;
-  ret_value = 0;
-  return ret_value;
-}
-/****if* H5Sf/h5sselect_select_c
- * NAME
- *  h5sselect_select_c
- * PURPOSE
- *  Call H5Sselect_ select
- * INPUTS
- *  space1_id - identifier of the first dataspace  to modify
- *  operator - defines how the new selection is combined
- *  space2_id - identifier of the second dataspace
- * RETURNS
- *  0 on success, -1 on failure
- * AUTHOR
- *  Elena Pourmal
- *  Monday, October 7, 2002
- * HISTORY
- *
- * SOURCE
-*/
-
-int_f
-h5sselect_select_c ( hid_t_f *space1_id , int_f *op, hid_t_f *space2_id)
-/******/
-{
-  int ret_value = -1;
-  hid_t c_space1_id;
-  hid_t c_space2_id;
-  H5S_seloper_t c_op;
-
-  c_op = (H5S_seloper_t)*op;
-
-  c_space1_id = (hid_t)*space1_id;
-  c_space2_id = (hid_t)*space2_id;
-  if( H5Sselect_select(c_space1_id, c_op, c_space2_id)< 0) return ret_value;
-  ret_value = 0;
-  return ret_value;
-}
-#endif /*NEW_HYPERSLAB_API*/
 /****if* H5Sf/h5sget_select_type_c
  * NAME
  *  h5sget_select_type_c
diff --git a/fortran/src/H5Sff.F90 b/fortran/src/H5Sff.F90
index 3434fba..3af7755 100644
--- a/fortran/src/H5Sff.F90
+++ b/fortran/src/H5Sff.F90
@@ -1275,310 +1275,6 @@ CONTAINS
     DEALLOCATE(def_stride)
     
   END SUBROUTINE h5sselect_hyperslab_f
-!  !$!
-!  !$!****s* H5S/h5scombine_hyperslab_f
-!  !$!
-!  !$! NAME
-!  !$!		h5scombine_hyperslab_f
-!  !$!
-!  !$! PURPOSE
-!  !$!	Combine a hyperslab selection with the current
-!  !$!               selection for a dataspace
-!  !$!
-!  !$! INPUTS
-!  !$!		space_id	- dataspace of selection to use
-!  !$!		operator	- flag, valid values are:
-!  !$!				  H5S_SELECT_NOOP_F
-!  !$!				  H5S_SELECT_SET_F
-!  !$!				  H5S_SELECT_OR_F
-!  !$!				  H5S_SELECT_AND_F
-!  !$!				  H5S_SELECT_XOR_F
-!  !$!				  H5S_SELECT_NOTB_F
-!  !$!				  H5S_SELECT_NOTA_F
-!  !$!				  H5S_SELECT_APPEND_F
-!  !$!				  H5S_SELECT_PREPEND_F
-!  !$!		start		- array with hyperslab offsets
-!  !$!		count		- number of blocks included in the
-!  !$!				  hyperslab
-!  !$! OUTPUTS
-!  !$!               hyper_id        - identifier for the new hyperslab
-!  !$!		hdferr:		- error code
-!  !$!				 	Success:  0
-!  !$!				 	Failure: -1
-!  !$! OPTIONAL PARAMETERS
-!  !$!		stride		- array with hyperslab strides
-!  !$!		block		- array with hyperslab block sizes
-!  !$!
-!  !$! AUTHOR
-!  !$!	Elena Pourmal
-!  !$!		October 7, 2002
-!  !$!
-!  !$! HISTORY
-!  !$!
-!  !$!
-!  !$! NOTES
-!  !$! Commented out until 1.6 ? 10/08/2002
-!  !$!
-!  !$! SOURCE
-!  SUBROUTINE h5scombine_hyperslab_f(space_id, operator, start, count, &
-!  hyper_id,  hdferr, stride, block)
-!  IMPLICIT NONE
-!  INTEGER(HID_T), INTENT(IN) :: space_id ! Dataspace identifier
-!  INTEGER, INTENT(IN) :: operator     ! Flag, valid values are:
-						!  H5S_SELECT_NOOP_F
-						!  H5S_SELECT_SET_F
-						!  H5S_SELECT_OR_F
-						!  H5S_SELECT_AND_F
-						!  H5S_SELECT_XOR_F
-						!  H5S_SELECT_NOTB_F
-						!  H5S_SELECT_NOTA_F
-						!  H5S_SELECT_APPEND_F
-						!  H5S_SELECT_PREPEND_F
-                                                !
-!  INTEGER(HSIZE_T), DIMENSION(*), INTENT(IN) :: start
-                                          ! Starting coordinates of the hyperslab
-!  INTEGER(HSIZE_T), DIMENSION(*), INTENT(IN) :: count
-                                          ! Number of blocks to select
-                                          ! from dataspace
-!  INTEGER(HID_T), INTENT(OUT) :: hyper_id ! New hyperslab identifier
-!  INTEGER, INTENT(OUT) :: hdferr     ! Error code
-!  INTEGER(HSIZE_T), DIMENSION(:), OPTIONAL, INTENT(IN) :: stride
-                                          ! Array of how many elements to move
-                                          ! in each direction
-!  INTEGER(HSIZE_T), DIMENSION(:), OPTIONAL, INTENT(IN) :: block
-                                          ! Sizes of element block
-!  INTEGER(HSIZE_T), DIMENSION(:), ALLOCATABLE :: def_block
-!  INTEGER(HSIZE_T), DIMENSION(:), ALLOCATABLE :: def_stride
-!  INTEGER :: rank
-!  INTEGER :: error1, error2
-
-!  INTERFACE
-!  INTEGER FUNCTION h5scombine_hyperslab_c(space_id, operator, &
-!  start, count, stride, block, hyper_id)
-!  USE H5GLOBAL
-!  !DEC$IF DEFINED(HDF5F90_WINDOWS)
-!  !DEC$ATTRIBUTES C,reference,decorate,alias:'H5SCOMBINE_HYPERSLAB_C'::h5scombine_hyperslab_c
-!  !DEC$ENDIF
-!  INTEGER(HID_T), INTENT(IN) :: space_id
-!  INTEGER, INTENT(IN) :: operator
-!  INTEGER(HSIZE_T), DIMENSION(*), INTENT(IN) :: start
-!  INTEGER(HSIZE_T), DIMENSION(*), INTENT(IN) :: count
-!  INTEGER(HSIZE_T), DIMENSION(*), OPTIONAL, INTENT(IN) :: stride
-!  INTEGER(HSIZE_T), DIMENSION(*), OPTIONAL, INTENT(IN) :: block
-!  INTEGER(HID_T), INTENT(OUT) :: hyper_id
-!  END FUNCTION h5scombine_hyperslab_c
-!  END INTERFACE
-
-!  if (present(stride).and. present(block)) then
-!  hdferr = h5scombine_hyperslab_c(space_id, operator, start, count, &
-!  stride, block, hyper_id)
-!  return
-!  endif
-            ! Case of optional parameters.
-            !
-            ! Find the rank of the dataspace to allocate memory for
-            ! default stride and block arrays.
-            !
-!  CALL h5sget_simple_extent_ndims_f(space_id, rank, hdferr)
-!  if( hdferr .EQ. -1) return
-            !
-!  if (present(stride).and. .not.present(block)) then
-!  allocate(def_block(rank), stat=error1)
-!  if (error1.NE.0) then
-!  hdferr = -1
-!  return
-!  endif
-!  def_block = 1
-!  hdferr = h5scombine_hyperslab_c(space_id, operator, start, count, &
-!  stride, def_block, hyper_id)
-!  deallocate(def_block)
-!  return
-!  endif
-
-!  if (.not.present(stride).and. present(block)) then
-!  allocate(def_stride(rank), stat=error2)
-!  if (error2.NE.0) then
-!  hdferr = -1
-!  return
-!  endif
-!  def_stride = 1
-!  hdferr = h5scombine_hyperslab_c(space_id, operator, start, count, &
-!  def_stride, block, hyper_id)
-!  deallocate(def_stride)
-!  return
-!  endif
-!  allocate(def_block(rank), stat=error1)
-!  allocate(def_stride(rank), stat=error2)
-!  if ((error1.NE.0) .OR. (error2.NE.0)) then
-!  hdferr = -1
-!  return
-!  endif
-!  def_block = 1
-!  def_stride = 1
-!  hdferr = h5scombine_hyperslab_c(space_id, operator, start, count, &
-!  def_stride, def_block, hyper_id)
-!  deallocate(def_block)
-!  deallocate(def_stride)
-
-!  END SUBROUTINE h5scombine_hyperslab_f
-
-!  !$!
-!  !$!****s* H5S/
-!  !$!
-!  !$! NAME
-!  !$!		h5scombine_select_f
-!  !$!
-!  !$! PURPOSE
-!  !$!	Combine two hyperslab selections with an operation
-!  !$!               and return a dataspace with resulting selection.
-!  !$!
-!  !$! INPUTS
-!  !$!		space1_id	- dataspace of selection to use
-!  !$!		operator	- flag, valid values are:
-!  !$!				  H5S_SELECT_NOOP_F
-!  !$!				  H5S_SELECT_SET_F
-!  !$!				  H5S_SELECT_OR_F
-!  !$!				  H5S_SELECT_AND_F
-!  !$!				  H5S_SELECT_XOR_F
-!  !$!				  H5S_SELECT_NOTB_F
-!  !$!				  H5S_SELECT_NOTA_F
-!  !$!				  H5S_SELECT_APPEND_F
-!  !$!				  H5S_SELECT_PREPEND_F
-!  !$!		space2_id	- dataspace of selection to use
-!  !$! OUTPUTS
-!  !$!               ds_id           - idataspace identifier with the new selection
-!  !$!		hdferr:		- error code
-!  !$!				 	Success:  0
-!  !$!				 	Failure: -1
-!  !$! OPTIONAL PARAMETERS		- NONE
-!  !$!
-!  !$! AUTHOR
-!  !$!	Elena Pourmal
-!  !$!		October 7, 2002
-!  !$!
-!  !$! HISTORY
-!  !$!
-!  !$!
-!  !$! NOTES commented out until 1.6 release(?) 10/08/2002
-!  !$!
-
-!  ! SOURCE
-!  !$          SUBROUTINE h5scombine_select_f(space1_id, operator, space2_id, &
-!  ds_id,  hdferr)
-!  IMPLICIT NONE
-!  INTEGER(HID_T), INTENT(IN) :: space1_id ! First dataspace identifier
-!  INTEGER(HID_T), INTENT(IN) :: space2_id ! Second dataspace identifier
-!  INTEGER, INTENT(IN) :: operator     ! Flag, valid values are:
-						!  H5S_SELECT_NOOP_F
-						!  H5S_SELECT_SET_F
-						!  H5S_SELECT_OR_F
-						!  H5S_SELECT_AND_F
-						!  H5S_SELECT_XOR_F
-						!  H5S_SELECT_NOTB_F
-						!  H5S_SELECT_NOTA_F
-						!  H5S_SELECT_APPEND_F
-						!  H5S_SELECT_PREPEND_F
-                                                !
-!  INTEGER(HID_T), INTENT(OUT) :: ds_id ! New dataspace identifier
-!  INTEGER, INTENT(OUT) :: hdferr     ! Error code
-!
-!  INTERFACE
-!  INTEGER FUNCTION h5scombine_select_c(space1_id, operator, &
-!  space2_id, ds_id)
-!  USE H5GLOBAL
-!  !DEC$IF DEFINED(HDF5F90_WINDOWS)
-!  !DEC$ATTRIBUTES C,reference,decorate,alias:'H5SCOMBINE_SELECT_C'::h5scombine_select_c
-!  !DEC$ENDIF
-!  INTEGER(HID_T), INTENT(IN) :: space1_id
-!  INTEGER(HID_T), INTENT(IN) :: space2_id
-!  INTEGER, INTENT(IN) :: operator
-!  INTEGER(HID_T), INTENT(OUT) :: ds_id
-!  END FUNCTION h5scombine_select_c
-!  END INTERFACE
-
-!  hdferr = h5scombine_select_c(space1_id, operator, space2_id, &
-!  ds_id)
-!  return
-
-!  END SUBROUTINE h5scombine_select_f
-
-!  !$!
-!  !$!****s* H5S/
-!  !$!
-!  !$! NAME
-!  !$!		h5sselect_select_f
-!  !$!
-!  !$! PURPOSE
-!  !$!	Refine a hyperslab selection with an operation
-!  !$!               using second hyperslab
-!  !$!
-!  !$! INPUTS
-!  !$!		space1_id	- dataspace of selection  to modify
-!  !$!		operator	- flag, valid values are:
-!  !$!				  H5S_SELECT_NOOP_F
-!  !$!				  H5S_SELECT_SET_F
-!  !$!				  H5S_SELECT_OR_F
-!  !$!				  H5S_SELECT_AND_F
-!  !$!				  H5S_SELECT_XOR_F
-!  !$!				  H5S_SELECT_NOTB_F
-!  !$!				  H5S_SELECT_NOTA_F
-!  !$!				  H5S_SELECT_APPEND_F
-!  !$!				  H5S_SELECT_PREPEND_F
-!  !$!		space2_id	- dataspace of selection to use
-!  !$!
-!  !$! OUTPUTS
-!  !$!		hdferr:		- error code
-!  !$!				 	Success:  0
-!  !$!				 	Failure: -1
-!  !$! OPTIONAL PARAMETERS		- NONE
-!  !$!
-!  !$! AUTHOR
-!  !$!	Elena Pourmal
-!  !$!		October 7, 2002
-!  !$!
-!  !$! HISTORY
-!  !$!
-!  !$!
-!  !$! NOTESCommented out until 1.6 release(?) 10/08/2002 EIP
-!  !$!
-
-!  ! SOURCE
-!  SUBROUTINE h5sselect_select_f(space1_id, operator, space2_id, &
-!  hdferr)
-!  IMPLICIT NONE
-!  INTEGER(HID_T), INTENT(INOUT) :: space1_id ! Dataspace identifier to
-                                                       ! modify
-!  INTEGER(HID_T), INTENT(IN) :: space2_id ! Second dataspace identifier
-!  INTEGER, INTENT(IN) :: operator     ! Flag, valid values are:
-						!  H5S_SELECT_NOOP_F
-						!  H5S_SELECT_SET_F
-						!  H5S_SELECT_OR_F
-						!  H5S_SELECT_AND_F
-						!  H5S_SELECT_XOR_F
-						!  H5S_SELECT_NOTB_F
-						!  H5S_SELECT_NOTA_F
-						!  H5S_SELECT_APPEND_F
-						!  H5S_SELECT_PREPEND_F
-                                                !
-!  INTEGER, INTENT(OUT) :: hdferr     ! Error code
-
-!  INTERFACE
-!  INTEGER FUNCTION h5sselect_select_c(space1_id, operator, &
-!  space2_id)
-!  USE H5GLOBAL
-!  !DEC$IF DEFINED(HDF5F90_WINDOWS)
-!  !DEC$ATTRIBUTES C,reference,decorate,alias:'H5SSELECT_SELECT_C'::h5sselect_select_c
-!  !DEC$ENDIF
-!  INTEGER(HID_T), INTENT(INOUT) :: space1_id
-!  INTEGER(HID_T), INTENT(IN) :: space2_id
-!  INTEGER, INTENT(IN) :: operator
-!  END FUNCTION h5sselect_select_c
-!  END INTERFACE
-
-!  hdferr = h5sselect_select_c(space1_id, operator, space2_id)
-!  return
-
-!  END SUBROUTINE h5sselect_select_f
 
 !
 !****s* H5S/h5sget_select_type_f
diff --git a/fortran/src/H5f90proto.h b/fortran/src/H5f90proto.h
index 56b7f22..fada004 100644
--- a/fortran/src/H5f90proto.h
+++ b/fortran/src/H5f90proto.h
@@ -120,9 +120,6 @@ H5_FCDLL int_f h5sset_extent_none_c( hid_t_f *space_id );
 H5_FCDLL int_f h5sselect_hyperslab_c( hid_t_f *space_id , int_f *op, hsize_t_f *start, hsize_t_f *count, hsize_t_f *stride, hsize_t_f *block);
 H5_FCDLL int_f h5sget_select_type_c( hid_t_f *space_id , int_f *op);
 H5_FCDLL int_f h5sselect_elements_c( hid_t_f *space_id , int_f *op, size_t_f *nelements, hsize_t_f *coord);
-H5_FCDLL int_f h5scombine_hyperslab_c( hid_t_f *space_id , int_f *op, hsize_t_f *start, hsize_t_f *count, hsize_t_f *stride, hsize_t_f *block, hid_t_f *hyper_id);
-H5_FCDLL int_f h5scombine_select_c( hid_t_f *space1_id , int_f *op, hid_t_f *space2_id, hid_t_f *ds_id);
-H5_FCDLL int_f h5sselect_select_c( hid_t_f *space1_id , int_f *op, hid_t_f *space2_id);
 H5_FCDLL int_f h5sdecode_c( _fcd buf, hid_t_f *obj_id );
 H5_FCDLL int_f h5sencode_c(_fcd buf, hid_t_f *obj_id, size_t_f *nalloc );
 H5_FCDLL int_f h5sextent_equal_c( hid_t_f * space1_id, hid_t_f *space2_id, hid_t_f *c_equal);