Hdf5 1 12 merge cmake ninja and java refs (#698)

* OESS-98 fix tools test for plugins

* sync fork

* Merge of changes from dev

* Move problem option to bottom of the list until fixed

* HDFFV-11106 - fix parsing optional args

* HDFFV-11106 add note

* grammer fix

* Whitespace after clang formatting

* Undo format version 11 changes

* Update check to working version

* Merge workflow and minor changes from develop

* Update supported platforms

* PR#3 merge from develop

* Merge gcc 10 diagnostics option from develop

* Merge #318 OSX changes from develop

* Merge serval small changes from dev

* fix typo

* Minor non-space formatting changes

* GH #386 copyright corrections for java folder

* revert because logic requires false return

* Merges from develop

#358 patches from vtk
#361 fix header guard spelling

* Remove case statement for H5I_EVENTSET

* Correct call with versioning

* Remove tabs

* Double underscore change

* Merges from develop

#340 clang -Wformat-security warnings
#360 Fixed uninitialized warnings
Remove more underscores from header guards

* Merge #380 from develop

* Correct date entry

* Split format source and commit changes on repo push

* remove pre-split setting

* Change windows TS to use older VS.

* HDFFV-11212 JNI export util and Javadoc

* Suggested review changes

* Another change found

* Committing clang-format changes

* Some Javadoc warning fixes

* Committing clang-format changes

* Updated javadoc fixes

* HDFFV-11228/9 merges from develop

* remove obsolete debug comment

* Fix conflict

* HDFFV-11229 merge changes from develop

* HDFFV-11229 merge second compare from develop

* HDFFV-11229 fix reference file

* HDFFV-11229 update autotools test script for two ref files

* HDFFV-11229 merge dev changes for long double display in tools

* Committing clang-format changes

* Update with changes from develop

* Add "option" command for clang options

* Rework CMake add_custom to use the BYPRODUCTS argument

Update pkgconfig scripts for parallel builds.
Fix install COPYING file reference.
Remove unused round defines.
Change CMake default setting of BUILD_CPP to off.

* Whitespace changes

* Rework CMake add_custom to use the BYPRODUCTS argument

* Revert CMake configure checks for round defines

* With VS 2015 minimum strdup is supported

* Doxygen comments merged from develop

* doxygen build updates

* Correct version string for map functions

* TRILAB-227 and tools debug merge from develop

* TRILAB-227 Enable test

* Quote subset args

* Use MATCHES in compiler id compare, merge from dev

* Revert test enable

* Add file to list

* doxygen version errors

* if blocks needed for build modes

* Update list of test platforms

* Issue #669 remove version from pkgcfg filename

* remove version from h5cc script

* Merge CMake and java refs from dev

Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>

2 files changed, 7 insertions, 7 deletions

diff --git a/fortran/src/CMakeLists.txt b/fortran/src/CMakeLists.txt
index d849086..e59a829 100644
--- a/fortran/src/CMakeLists.txt
+++ b/fortran/src/CMakeLists.txt
@@ -74,7 +74,7 @@ add_executable (H5match_types
 target_include_directories (H5match_types PRIVATE "${HDF5_SRC_BINARY_DIR};${HDF5_SRC_DIR};${HDF5_F90_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
 
 add_custom_command (TARGET H5match_types POST_BUILD
-    BYPRODUCTS H5f90i_gen.h H5fortran_types.F90
+    BYPRODUCTS ${HDF5_F90_BINARY_DIR}/H5f90i_gen.h ${HDF5_F90_BINARY_DIR}/H5fortran_types.F90
     COMMAND ${CMAKE_CROSSCOMPILING_EMULATOR} $<TARGET_FILE:H5match_types>
     WORKING_DIRECTORY ${HDF5_F90_BINARY_DIR}
     DEPENDS H5match_types
@@ -82,7 +82,7 @@ add_custom_command (TARGET H5match_types POST_BUILD
 
 if (NOT ONLY_SHARED_LIBS)
   add_custom_command (TARGET H5match_types POST_BUILD
-      BYPRODUCTS H5f90i_gen.h H5fortran_types.F90
+      BYPRODUCTS ${HDF5_F90_BINARY_DIR}/static/H5f90i_gen.h ${HDF5_F90_BINARY_DIR}/static/H5fortran_types.F90
       COMMAND    ${CMAKE_COMMAND}
       ARGS       -E copy_if_different ${HDF5_F90_BINARY_DIR}/H5f90i_gen.h ${HDF5_F90_BINARY_DIR}/static/H5f90i_gen.h
       COMMAND    ${CMAKE_COMMAND}
@@ -95,7 +95,7 @@ if (NOT ONLY_SHARED_LIBS)
 endif ()
 if (BUILD_SHARED_LIBS)
   add_custom_command (TARGET H5match_types POST_BUILD
-      BYPRODUCTS H5f90i_gen.h H5fortran_types.F90
+      BYPRODUCTS ${HDF5_F90_BINARY_DIR}/shared/H5f90i_gen.h ${HDF5_F90_BINARY_DIR}/shared/H5fortran_types.F90
       COMMAND    ${CMAKE_COMMAND}
       ARGS       -E copy_if_different ${HDF5_F90_BINARY_DIR}/H5f90i_gen.h ${HDF5_F90_BINARY_DIR}/shared/H5f90i_gen.h
       COMMAND    ${CMAKE_COMMAND}
@@ -235,7 +235,7 @@ add_custom_command (TARGET H5_buildiface POST_BUILD
 )
 if (NOT ONLY_SHARED_LIBS)
   add_custom_command (TARGET H5_buildiface POST_BUILD
-      BYPRODUCTS H5_gen.F90
+      BYPRODUCTS ${HDF5_F90_BINARY_DIR}/static/H5_gen.F90
       COMMAND    ${CMAKE_COMMAND}
       ARGS       -E copy_if_different ${HDF5_F90_BINARY_DIR}/H5_gen.F90 ${HDF5_F90_BINARY_DIR}/static/H5_gen.F90
       WORKING_DIRECTORY ${HDF5_F90_BINARY_DIR}/static
@@ -250,7 +250,7 @@ endif ()
 
 if (BUILD_SHARED_LIBS)
   add_custom_command (TARGET H5_buildiface POST_BUILD
-      BYPRODUCTS H5_gen.F90
+      BYPRODUCTS ${HDF5_F90_BINARY_DIR}/shared/H5_gen.F90
       COMMAND    ${CMAKE_COMMAND}
       ARGS       -E copy_if_different ${HDF5_F90_BINARY_DIR}/H5_gen.F90 ${HDF5_F90_BINARY_DIR}/shared/H5_gen.F90
       WORKING_DIRECTORY ${HDF5_F90_BINARY_DIR}/shared
diff --git a/fortran/test/CMakeLists.txt b/fortran/test/CMakeLists.txt
index 147746c..1e879e7 100644
--- a/fortran/test/CMakeLists.txt
+++ b/fortran/test/CMakeLists.txt
@@ -92,7 +92,7 @@ endif ()
 
 if (NOT BUILD_SHARED_LIBS)
   add_custom_command (TARGET H5_test_buildiface POST_BUILD
-      BYPRODUCTS tf_gen.F90
+      BYPRODUCTS ${HDF5_FORTRAN_TESTS_BINARY_DIR}/static/tf_gen.F90
       COMMAND ${CMAKE_CROSSCOMPILING_EMULATOR} $<TARGET_FILE:H5_test_buildiface>
       WORKING_DIRECTORY ${HDF5_FORTRAN_TESTS_BINARY_DIR}/static
       DEPENDS H5_test_buildiface
@@ -104,7 +104,7 @@ if (NOT BUILD_SHARED_LIBS)
   set_source_files_properties (${HDF5_FORTRAN_TESTS_BINARY_DIR}/static/tf_gen.F90 PROPERTIES GENERATED TRUE)
 else ()
   add_custom_command (TARGET H5_test_buildiface POST_BUILD
-      BYPRODUCTS tf_gen.F90
+      BYPRODUCTS ${HDF5_FORTRAN_TESTS_BINARY_DIR}/shared/tf_gen.F90
       COMMAND ${CMAKE_CROSSCOMPILING_EMULATOR} $<TARGET_FILE:H5_test_buildiface>
       WORKING_DIRECTORY ${HDF5_FORTRAN_TESTS_BINARY_DIR}/shared
       DEPENDS H5_test_buildiface